Pregenerated sensors for PIAS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025423Ensembl transcript IDs: ENSMUST00000114776.4, ENSMUST00000114777.10, ENSMUST00000168882.9, ENSMUST00000235135.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCCCACTGCTGGTTATGACCCCTGTCTCACTCCTGCTGCTGGATaGACTAACGTGAGTACTGCTTTCATGGGGGCTGGTGGTGGTGAC | + |
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Preference number: 1 (lower is better) Translates to: PPTAGYDPCLTPAAG*TNVSTAFMGAGGGD Trigger: GTCACCACCACCAGCCCCCATGAAAGCAGTACTCACGTTAGTTCATCCAGCAGCAGGAGTGAGACAGGGGTCATAACCAGCAGTGGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR CCA 90 bp | CAGGGGGCGTCCAGGGCGCTTCTGTTCAATCCCATTTTTAGGTGGTaGCGCATAGCCTTTATATATGGGAGCTCAAGGGCAATTAATAGT | + |
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Preference number: 1 (lower is better) Translates to: QGASRALLFNPIFRW*RIAFIYGSSRAINS Trigger: ACTATTAATTGCCCTTGAGCTCCCATATATAAAGGCTATGCGCCACCACCTAAAAATGGGATTGAACAGAAGCGCCCTGGACGCCCCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR CCA 90 bp | GTTCAGGGGGCGTCCAGGGCGCTTCTGTTCAATCCCATTTTTAGGTaGTGGCGCATAGCCTTTATATATGGGAGCTCAAGGGCAATTAAT | + |
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Preference number: 1 (lower is better) Translates to: VQGASRALLFNPIFR*WRIAFIYGSSRAIN Trigger: ATTAATTGCCCTTGAGCTCCCATATATAAAGGCTATGCGCCACCACCTAAAAATGGGATTGAACAGAAGCGCCCTGGACGCCCCCTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR TCA 90 bp | CATGTACAGCATAAGAAAAGTCCTTGCATGTCATCTGGTTCTTGCTaGAGTCATCGATGTTCATCTCTCAGAGAGCAAAGAATCCATTTG | + |
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Preference number: 1 (lower is better) Translates to: HVQHKKSPCMSSGSC*SHRCSSLREQRIHL Trigger: CAAATGGATTCTTTGCTCTCTGAGAGATGAACATCGATGACTTCAGCAAGAACCAGATGACATGCAAGGACTTTTCTTATGCTGTACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAAAGAGATGATGTCAGGAATGTTCCTCCCACTGCTGGTTATGACCCCTGTCACTCCTGCTGCTGGATaGACTAACGTGAGTACTGCT | + |
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Preference number: 2 (lower is better) Translates to: SKEMMSGMFLPLLVMTPVTPAAG*TNVSTA Trigger: AGCAGTACTCACGTTAGTTCATCCAGCAGCAGGAGT...GACAGGGGTCATAACCAGCAGTGGGAGGAACATTCCTGACATCATCTCTTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTGGTGGTGACAGACGTACTGCTTGCTGTTAAGGGTGAGGTGAGACTATCCGTACTGGGGATCAACTaGAATAAGGGAAAGAAAATC | + |
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Preference number: 2 (lower is better) Translates to: LVVVTDVLLAVKGEVRLSVLGIN*NKGKKI Trigger: GATTTTCTTTCCCTTATTCCAGTTGATCCCCAGTAC...GGATAGTCTCACCTCACCCTTAACAGCAAGCAGTACGTCTGTCACCACCACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAAAGAGATGATGTCAGGAATGTTCCTCCCACTGCTGGTTATGACCCCTGTCTATCTTCTTCTTGCTTaGATCACTGGCTACAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: SKEMMSGMFLPLLVMTPVYLLLA*ITGYSH Trigger: GTGACTGTAGCCAGTGATGCAAGCAAGAAGAAGATA...GACAGGGGTCATAACCAGCAGTGGGAGGAACATTCCTGACATCATCTCTTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR-3UTR TCA 90 bp | ATGACATGCTTGACACTGGCGTGTGGTGGAATGGTACTGAGTAGTCTGTTAATGCTTACAGAAGATGGCTaGTACATGAGAACCCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: MTCLTLACGGMVLSSLLMLTEDG*YMRTPL Trigger: CAAAGGGGTTCTCATGTATCAGCCATCTTCTGTAAG...CATTAACAGACTACTCAGTACCATTCCACCACACGCCAGTGTCAAGCATGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTAGTCCAAAGAGATGATGTCAGGAATGTTCCTCCCACTGCTGGTTATGACTCTTGCTTGCATCACTaGCTACAGTCACTGAACAAG | + |
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Preference number: 2 (lower is better) Translates to: PLVQRDDVRNVPPTAGYDSCLHH*LQSLNK Trigger: CTTGTTCAGTGACTGTAGCCAGTGATGCAAGCAAGA...GTCATAACCAGCAGTGGGAGGAACATTCCTGACATCATCTCTTTGGACTAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR-3UTR TCA 90 bp | TTACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAAATAGCCACCGTTGTGGATaGGATAGATCTGATGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LLCTYQQTTSKRKRQEKNSHRCG*DRSDAP Trigger: TGGAGCATCAGATCTATCTCATCCACAACGGTGGCT...ATTTTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
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| 3UTR-3UTR TCA 90 bp | CCTTTGGTTGGACTGCTTTGTGTTTCTGACATAAAGATGCATTTCCTTTTGGCGCAAGAAATAGAAATCTaGTTTGGCACAGCTGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: PLVGLLCVSDIKMHFLLAQEIEI*FGTAED Trigger: GTCTTCAGCTGTGCCAAATCAGATTTCTATTTCTTG...CGCCAAAAGGAAATGCATCTTTATGTCAGAAACACAAAGCAGTCCAACCAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR-3UTR GCA 90 bp | ATGACATGCTTGACACTGGCGTGTGGTGGAATGGTACTGAGTAGTCTGTTAATGCTTTCCAATTTCAGATaGCCAAGAAATAGAAATCTG | + |
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Preference number: 2 (lower is better) Translates to: MTCLTLACGGMVLSSLLMLSNFR*PRNRNL Trigger: CAGATTTCTATTTCTTGGGCATCTGAAATTGGAAAG...CATTAACAGACTACTCAGTACCATTCCACCACACGCCAGTGTCAAGCATGTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR-3UTR GCA 90 bp | AGAACCCCTTTGGTTGGACTGCTTTGTGTTTCTGACATAAAGATGCATTTCCTTCATCTATCTTCTTCTTaGTTGCATCACTGGCTACAG | + |
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Preference number: 2 (lower is better) Translates to: RTPLVGLLCVSDIKMHFLHLSSS*LHHWLQ Trigger: CTGTAGCCAGTGATGCAAGCAAGAAGAAGATAGATG...AAGGAAATGCATCTTTATGTCAGAAACACAAAGCAGTCCAACCAAAGGGGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR-3UTR CCA 90 bp | ACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTCCCATTTTTAGGTGGTaGCGCATAGCCTTTATATAT | + |
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Preference number: 2 (lower is better) Translates to: TVVDEIDLMLHVQHKKSPPIFRW*RIAFIY Trigger: ATATATAAAGGCTATGCGCCACCACCTAAAAATGGG...AGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR-3UTR CCA 90 bp | GCATCACTGGCTACAGTCACTGAACAAGGTTTACTAAAGACACTTGAACTTTCTAATCCCATTTTTAGGTaGTGGCGCATAGCCTTTATA | + |
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Preference number: 2 (lower is better) Translates to: ASLATVTEQGLLKTLELSNPIFR*WRIAFI Trigger: TATAAAGGCTATGCGCCACCACCTAAAAATGGGATT...AGAAAGTTCAAGTGTCTTTAGTAAACCTTGTTCAGTGACTGTAGCCAGTGATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR-3UTR CCA 90 bp | AGAACCCCTTTGGTTGGACTGCTTTGTGTTTCTGACATAAAGATGCATTTCCTTCAAGAACCATCTTCCTaGAATTTGATCTCATCCACA | + |
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Preference number: 2 (lower is better) Translates to: RTPLVGLLCVSDIKMHFLQEPSS*NLISST Trigger: TGTGGATGAGATCAAATTCCAGGAAGATGGTTCTTG...AAGGAAATGCATCTTTATGTCAGAAACACAAAGCAGTCCAACCAAAGGGGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR CAA 90 bp | TCAGAAGAGCTCTCTATTGTTAGATCAATAACATCTATCTTCTTCTaGCTTGCATCACTGGCTACAGTCACTGAACAAGGTTTACTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SEELSIVRSITSIFF*LASLATVTEQGLLK Trigger: CTTTAGTAAACCTTGTTCAGTGACTGTAGCCAGTGATGCAAGCAAGAAGAAGATAGATGTTATTGATCTAACAATAGAGAGCTCTTCTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR TCA 72 bp | ACCCCTGTCTCACTCCTGCTGCTGGATGAACTAACGTaGGTACTGCTTTCATGGGGGCTGGTGGTGGTGACA | + |
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Preference number: 3 (lower is better) Translates to: TPVSLLLLDELT*VLLSWGLVVVT Trigger: TGTCACCACCACCAGCCCCCATGAAAGCAGTACTCACGTTAGTTCATCCAGCAGCAGGAGTGAGACAGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR TCA 72 bp | GCTGGTTATGACCCCTGTCTCACTCCTGCTGCTGGATaGACTAACGTGAGTACTGCTTTCATGGGGGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: AGYDPCLTPAAG*TNVSTAFMGAG Trigger: ACCAGCCCCCATGAAAGCAGTACTCACGTTAGTTCATCCAGCAGCAGGAGTGAGACAGGGGTCATAACCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR CCA 72 bp | GCGTCCAGGGCGCTTCTGTTCAATCCCATTTTTAGGTaGTGGCGCATAGCCTTTATATATGGGAGCTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: ASRALLFNPIFR*WRIAFIYGSSR Trigger: CCTTGAGCTCCCATATATAAAGGCTATGCGCCACCACCTAAAAATGGGATTGAACAGAAGCGCCCTGGACGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR CCA 72 bp | TCCAGGGCGCTTCTGTTCAATCCCATTTTTAGGTGGTaGCGCATAGCCTTTATATATGGGAGCTCAAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: SRALLFNPIFRW*RIAFIYGSSRA Trigger: TGCCCTTGAGCTCCCATATATAAAGGCTATGCGCCACCACCTAAAAATGGGATTGAACAGAAGCGCCCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTTAGTCCAAAGAGATGATGTCAGGAATGTTCCTCCCACTGCTGGTTATGACCTGCACGGCACGGGATaGTCAGCCTCATTTTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: PLVQRDDVRNVPPTAGYDLHGTG*SASFFL Trigger: TAGGAAAAATGAGGCTGACAATCCCGTGCCGTGCAG...GTCATAACCAGCAGTGGGAGGAACATTCCTGACATCATCTCTTTGGACTAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTTAGTCCAAAGAGATGATGTCAGGAATGTTCCTCCCACTGCTGGTTATGACAATCTGATGACATGCTaGACACTGGCGTGTGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: PLVQRDDVRNVPPTAGYDNLMTC*TLACGG Trigger: TCCACCACACGCCAGTGTCAAGCATGTCATCAGATT...GTCATAACCAGCAGTGGGAGGAACATTCCTGACATCATCTCTTTGGACTAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR GCA 72 bp | GGGAAAGAAAATCCAAACCTGGCAAATCTGATGACATaGTTGACACTGGCGTGTGGTGGAATGGTACTGAGT | + |
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Preference number: 3 (lower is better) Translates to: GKENPNLANLMT*LTLACGGMVLS Trigger: ACTCAGTACCATTCCACCACACGCCAGTGTCAAGCATGTCATCAGATTTGCCAGGTTTGGATTTTCTTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR-3UTR CAA 90 bp | ACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTCATGTCATCTGGTTCTaGCTGAAGTCATCGATGTTC | + |
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Preference number: 3 (lower is better) Translates to: TVVDEIDLMLHVQHKKSPHVIWF*LKSSMF Trigger: GAACATCGATGACTTCAGCAAGAACCAGATGACATG...AGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| 3UTR-3UTR CAA 90 bp | GCATCACTGGCTACAGTCACTGAACAAGGTTTACTAAAGACACTTGAACTTTCTCCATCTTCCTGGAATTaGATCTCATCCACATCAGAA | + |
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Preference number: 3 (lower is better) Translates to: ASLATVTEQGLLKTLELSPSSWN*ISSTSE Trigger: TTCTGATGTGGATGAGATCAAATTCCAGGAAGATGG...AGAAAGTTCAAGTGTCTTTAGTAAACCTTGTTCAGTGACTGTAGCCAGTGATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| 3UTR-3UTR CAA 90 bp | TACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAAATGCATGTCATCTGGTTCTaGCTGAAGTCATCGATGTTC | + |
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Preference number: 3 (lower is better) Translates to: YSAHISKQHQSVNDKRKMHVIWF*LKSSMF Trigger: GAACATCGATGACTTCAGCAAGAACCAGATGACATG...CATTTTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
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| 3UTR GCA 72 bp | AATTATAAAGAGCAACCAAGTCCCAGCACTTTACTCTaGACATATCAGCAAACAACATCAAAGCGTAAACGA | + |
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Preference number: 3 (lower is better) Translates to: NYKEQPSPSTLL*TYQQTTSKRKR Trigger: TCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTAAAGTGCTGGGACTTGGTTGCTCTTTATAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
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| CDS-3UTR GCA 90 bp | CTGGTGGTGGTGACAGACGTACTGCTTGCTGTTAAGGGTGAGGTGAGACTATCCATGGGCGGAGACGGCTaGTGCATCTCAAAGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LVVVTDVLLAVKGEVRLSMGGDG*CISKVG Trigger: GCCCACCTTTGAGATGCAGCAGCCGTCTCCGCCCAT...GGATAGTCTCACCTCACCCTTAACAGCAAGCAGTACGTCTGTCACCACCACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| CDS-3UTR CCA 90 bp | TCCAAAGAGATGATGTCAGGAATGTTCCTCCCACTGCTGGTTATGACCCCTGTCGTCGAAGGCAACGAGTaGATCCCAGCCACAGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: SKEMMSGMFLPLLVMTPVVEGNE*IPATGK Trigger: CTTGCCTGTGGCTGGGATCCACTCGTTGCCTTCGAC...GACAGGGGTCATAACCAGCAGTGGGAGGAACATTCCTGACATCATCTCTTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| CDS-3UTR CCA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTGATGGACAGGAGGAATaGGCGGAGACGGCTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSDGQEE*AETAAA Trigger: TGCAGCAGCCGTCTCCGCCCATTCCTCCTGTCCATC...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS-3UTR TCA 90 bp | CATCTGGTTCTTGCTGAAGTCATCGATGTTCATCTCTCAGAGAGCAAAGAATCCTCCCACTGCTGGTTATaGCCCCTGTCTCACTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: HLVLAEVIDVHLSESKESSHCWL*PLSHSC Trigger: GCAGGAGTGAGACAGGGGTCATAACCAGCAGTGGGA...GGATTCTTTGCTCTCTGAGAGATGAACATCGATGACTTCAGCAAGAACCAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
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| CDS-3UTR GCA 90 bp | ACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTATGGGCGGAGACGGCTaGTGCATCTCAAAGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: TVVDEIDLMLHVQHKKSPMGGDG*CISKVG Trigger: GCCCACCTTTGAGATGCAGCAGCCGTCTCCGCCCAT...AGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS-3UTR CCA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTGTCGAAGGCAACGAGTaGATCCCAGCCACAGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSVEGNE*IPATGK Trigger: CTTGCCTGTGGCTGGGATCCACTCGTTGCCTTCGAC...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS-3UTR CCA 90 bp | GTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTTGCATGGATGGACAGGAGGAATaGGCGGAGACGGCTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VDEIDLMLHVQHKKSPCMDGQEE*AETAAA Trigger: TGCAGCAGCCGTCTCCGCCCATTCCTCCTGTCCATC...CATGCAAGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS-3UTR TCA 90 bp | CATCTGGTTCTTGCTGAAGTCATCGATGTTCATCTCTCAGAGAGCAAAGAATCCAGCAGCAGGATCAACTaGAGTCACACTGGGCACCCT | + |
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Preference number: 4 (lower is better) Translates to: HLVLAEVIDVHLSESKESSSRIN*SHTGHP Trigger: AGGGTGCCCAGTGTGACTTCAGTTGATCCTGCTGCT...GGATTCTTTGCTCTCTGAGAGATGAACATCGATGACTTCAGCAAGAACCAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
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| CDS-3UTR TCA 90 bp | ATGACATGCTTGACACTGGCGTGTGGTGGAATGGTACTGAGTAGTCTGTTAATGTCTCGAATTTTAATCTaGACCGCAGGGCTGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: MTCLTLACGGMVLSSLLMSRILI*TAGLQP Trigger: TGGCTGCAGCCCTGCGGTTCAGATTAAAATTCGAGA...CATTAACAGACTACTCAGTACCATTCCACCACACGCCAGTGTCAAGCATGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
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| CDS-3UTR CCA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCCATTTTTAGGTGGTaGCGCATAGCCAGGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSPIFRW*RIARQR Trigger: CCTTTGCCTGGCTATGCGCCACCACCTAAAAATGGG...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
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| CDS-3UTR TCA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTTCTCGAATTTTAATCTaGACCGCAGGGCTGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSSRILI*TAGLQP Trigger: TGGCTGCAGCCCTGCGGTTCAGATTAAAATTCGAGA...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS-3UTR TCA 90 bp | CATCTGGTTCTTGCTGAAGTCATCGATGTTCATCTCTCAGAGAGCAAAGAATCCACTCCTGCTGCTGGATaGACTAACGTGAGTACTGCT | + |
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Preference number: 4 (lower is better) Translates to: HLVLAEVIDVHLSESKESTPAAG*TNVSTA Trigger: AGCAGTACTCACGTTAGTTCATCCAGCAGCAGGAGT...GGATTCTTTGCTCTCTGAGAGATGAACATCGATGACTTCAGCAAGAACCAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
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| CDS-3UTR GCA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTATGTGTACAAGTCACTaGACGGCACGGGATTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSMCTSH*TARDCQ Trigger: CTGACAATCCCGTGCCGTGCAGTGACTTGTACACAT...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
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| CDS-3UTR CCA 90 bp | GTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTTGCATGCCCATTTTTAGGTGGTaGCGCATAGCCAGGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: VDEIDLMLHVQHKKSPCMPIFRW*RIARQR Trigger: CCTTTGCCTGGCTATGCGCCACCACCTAAAAATGGG...CATGCAAGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
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| CDS-3UTR TCA 90 bp | GTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTTGCATGTCTCGAATTTTAATCTaGACCGCAGGGCTGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: VDEIDLMLHVQHKKSPCMSRILI*TAGLQP Trigger: TGGCTGCAGCCCTGCGGTTCAGATTAAAATTCGAGA...CATGCAAGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS-3UTR GCA 90 bp | ACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTTCAGGAGGTCATGCTTaGGCCCACTTTTATTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: TVVDEIDLMLHVQHKKSPSGGHA*AHFYSV Trigger: GACGGAATAAAAGTGGGCGCAAGCATGACCTCCTGA...AGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS-3UTR GCA 90 bp | CATCTGGTTCTTGCTGAAGTCATCGATGTTCATCTCTCAGAGAGCAAAGAATCCTCTGAACCGCAGGGCTaGAGCCACTCTTCAATAAAT | + |
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Preference number: 4 (lower is better) Translates to: HLVLAEVIDVHLSESKESSEPQG*SHSSIN Trigger: ATTTATTGAAGAGTGGCTGCAGCCCTGCGGTTCAGA...GGATTCTTTGCTCTCTGAGAGATGAACATCGATGACTTCAGCAAGAACCAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS-3UTR GCA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTGTGGGCTTAGTGTCTTaGAGCAGTACAGAACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSVGLVS*SSTEPT Trigger: TGTTGGTTCTGTACTGCTGCAAGACACTAAGCCCAC...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
||
| CDS-3UTR GCA 90 bp | GTTGCAAAAATCAGCTTCCATGGACTAAACATCCAAGAAAGAGTTTTGATGAATATGGGCGGAGACGGCTaGTGCATCTCAAAGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VAKISFHGLNIQERVLMNMGGDG*CISKVG Trigger: GCCCACCTTTGAGATGCAGCAGCCGTCTCCGCCCAT...ATTCATCAAAACTCTTTCTTGGATGTTTAGTCCATGGAAGCTGATTTTTGCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
||
| CDS-3UTR GCA 90 bp | ACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTATGTGTACAAGTCACTaGACGGCACGGGATTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVVDEIDLMLHVQHKKSPMCTSH*TARDCQ Trigger: CTGACAATCCCGTGCCGTGCAGTGACTTGTACACAT...AGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR GCA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTGCAAATCTGATGACATaGTTGACACTGGCGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSANLMT*LTLACG Trigger: ACCACACGCCAGTGTCAAGCATGTCATCAGATTTGC...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAGTCGAAGGCAACGAGTaGATCCCAGCCACAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLLCTYQQTTSKRKRQEKVEGNE*IPATGK Trigger: CTTGCCTGTGGCTGGGATCCACTCGTTGCCTTCGAC...TTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR CCA 90 bp | CATCTGGTTCTTGCTGAAGTCATCGATGTTCATCTCTCAGAGAGCAAAGAATCCCAACTGAAGTCACACTaGGCACCCTTACAGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: HLVLAEVIDVHLSESKESQLKSH*APLQKM Trigger: CATCTTCTGTAAGGGTGCCCAGTGTGACTTCAGTTG...GGATTCTTTGCTCTCTGAGAGATGAACATCGATGACTTCAGCAAGAACCAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR TCA 90 bp | CATCTGGTTCTTGCTGAAGTCATCGATGTTCATCTCTCAGAGAGCAAAGAATCCCTTACAGAAGATGGCTaGTACATGAGAACCCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HLVLAEVIDVHLSESKESLTEDG*YMRTPL Trigger: CAAAGGGGTTCTCATGTATCAGCCATCTTCTGTAAG...GGATTCTTTGCTCTCTGAGAGATGAACATCGATGACTTCAGCAAGAACCAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR TCA 90 bp | ATGCACAGTACAAAGATTATTTGCTTTGATGGGATCATGAAGAACAGAAAACCTTCCCACTGCTGGTTATaGCCCCTGTCTCACTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MHSTKIICFDGIMKNRKPSHCWL*PLSHSC Trigger: GCAGGAGTGAGACAGGGGTCATAACCAGCAGTGGGA...AGGTTTTCTGTTCTTCATGATCCCATCAAAGCAAATAATCTTTGTACTGTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR GCA 90 bp | AGAACCCCTTTGGTTGGACTGCTTTGTGTTTCTGACATAAAGATGCATTTCCTTTCAGGAGGTCATGCTTaGGCCCACTTTTATTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTPLVGLLCVSDIKMHFLSGGHA*AHFYSV Trigger: GACGGAATAAAAGTGGGCGCAAGCATGACCTCCTGA...AAGGAAATGCATCTTTATGTCAGAAACACAAAGCAGTCCAACCAAAGGGGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
||
| CDS-3UTR GCA 90 bp | ACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTTCTGAACCGCAGGGCTaGAGCCACTCTTCAATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TVVDEIDLMLHVQHKKSPSEPQG*SHSSIN Trigger: ATTTATTGAAGAGTGGCTGCAGCCCTGCGGTTCAGA...AGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
||
| CDS-3UTR GCA 90 bp | ACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTGTGGGCTTAGTGTCTTaGAGCAGTACAGAACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TVVDEIDLMLHVQHKKSPVGLVS*SSTEPT Trigger: TGTTGGTTCTGTACTGCTGCAAGACACTAAGCCCAC...AGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
||
| CDS-3UTR GCA 90 bp | ACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTGCAAATCTGATGACATaGTTGACACTGGCGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TVVDEIDLMLHVQHKKSPANLMT*LTLACG Trigger: ACCACACGCCAGTGTCAAGCATGTCATCAGATTTGC...AGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR CCA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTTCTTGCTTGCATCACTaGCTACAGTCACTGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSSCLHH*LQSLNK Trigger: CTTGTTCAGTGACTGTAGCCAGTGATGCAAGCAAGA...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR CCA 90 bp | ACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTAGATGCATTTCCTTTTaGCGGGAGGGTCTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVVDEIDLMLHVQHKKSPRCISF*REGLPL Trigger: AAGAGGAAGACCCTCCCGCCAAAAGGAAATGCATCT...AGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR CCA 90 bp | GTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTTGCATGCACCCTTACAGAAGATaGCTGATACATGAGAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: VDEIDLMLHVQHKKSPCMHPYRR*LIHENP Trigger: GGGGTTCTCATGTATCAGCCATCTTCTGTAAGGGTG...CATGCAAGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR CCA 90 bp | GTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTTGCATGCAACTGAAGTCACACTaGGCACCCTTACAGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VDEIDLMLHVQHKKSPCMQLKSH*APLQKM Trigger: CATCTTCTGTAAGGGTGCCCAGTGTGACTTCAGTTG...CATGCAAGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| 3UTR CAA 72 bp | AAAGAAAATCCAAACCTGGCAAATCTGATGACATGCTaGACACTGGCGTGTGGTGGAATGGTACTGAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KENPNLANLMTC*TLACGGMVLSS Trigger: ACTACTCAGTACCATTCCACCACACGCCAGTGTCAAGCATGTCATCAGATTTGCCAGGTTTGGATTTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
||
| CDS-3UTR TCA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTACTGGCTACAGTCACTaGACAAGGTTTACTAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSTGYSH*TRFTKD Trigger: GTCTTTAGTAAACCTTGTTCAGTGACTGTAGCCAGT...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR TCA 90 bp | ACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTCTTACAGAAGATGGCTaGTACATGAGAACCCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TVVDEIDLMLHVQHKKSPLTEDG*YMRTPL Trigger: CAAAGGGGTTCTCATGTATCAGCCATCTTCTGTAAG...AGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR GCA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCATCTATCTTCTTCTTaGTTGCATCACTGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSHLSSS*LHHWLQ Trigger: CTGTAGCCAGTGATGCAAGCAAGAAGAAGATAGATG...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR CCA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTACTTTTGTACAGGGCTaGCTGGTTACTTTCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSTFVQG*LVTFIA Trigger: AGCTATGAAAGTAACCAGCCAGCCCTGTACAAAAGT...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR TCA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCAAGCTGAAAACCGATaGTTTGATTGTGGAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSQAENR*FDCGKI Trigger: GATCTTTCCACAATCAAATCATCGGTTTTCAGCTTG...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
||
| CDS-3UTR TCA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCAAGAAATAGAAATCTaGTTTGGCACAGCTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSQEIEI*FGTAED Trigger: GTCTTCAGCTGTGCCAAATCAGATTTCTATTTCTTG...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR TCA 90 bp | ACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTCATCTTCCTGGAATTTaGTCTCATCCACATCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TVVDEIDLMLHVQHKKSPHLPGI*SHPHQN Trigger: GTTCTGATGTGGATGAGATCAAATTCCAGGAAGATG...AGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR TCA 90 bp | CTTTACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAACTGGATGAACTAACGTaGGTACTGCTTTCATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYSAHISKQHQSVNDKRKLDELT*VLLSWG Trigger: CCCCCATGAAAGCAGTACTCACGTTAGTTCATCCAG...TTTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR TCA 90 bp | ACTTTACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAACTCCTGCTGCTGGATaGACTAACGTGAGTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLLCTYQQTTSKRKRQEKTPAAG*TNVSTA Trigger: AGCAGTACTCACGTTAGTTCATCCAGCAGCAGGAGT...TTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR GCA 90 bp | TACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAAATGTCAGGAGGTCATGCTTaGGCCCACTTTTATTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: YSAHISKQHQSVNDKRKMSGGHA*AHFYSV Trigger: GACGGAATAAAAGTGGGCGCAAGCATGACCTCCTGA...CATTTTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR GCA 90 bp | GTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTTGCATGTATCTTCTTCTTGCTTaGATCACTGGCTACAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VDEIDLMLHVQHKKSPCMYLLLA*ITGYSH Trigger: GTGACTGTAGCCAGTGATGCAAGCAAGAAGAAGATA...CATGCAAGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR CCA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCAAGAACCATCTTCCTaGAATTTGATCTCATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSQEPSS*NLISST Trigger: TGTGGATGAGATCAAATTCCAGGAAGATGGTTCTTG...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR CCA 90 bp | CATCTGGTTCTTGCTGAAGTCATCGATGTTCATCTCTCAGAGAGCAAAGAATCCGTACTGGGGATCAACTaGAATAAGGGAAAGAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: HLVLAEVIDVHLSESKESVLGIN*NKGKKI Trigger: GATTTTCTTTCCCTTATTCCAGTTGATCCCCAGTAC...GGATTCTTTGCTCTCTGAGAGATGAACATCGATGACTTCAGCAAGAACCAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR TCA 90 bp | GTTGCAAAAATCAGCTTCCATGGACTAAACATCCAAGAAAGAGTTTTGATGAATCTGGATGAACTAACGTaGGTACTGCTTTCATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VAKISFHGLNIQERVLMNLDELT*VLLSWG Trigger: CCCCCATGAAAGCAGTACTCACGTTAGTTCATCCAG...ATTCATCAAAACTCTTTCTTGGATGTTTAGTCCATGGAAGCTGATTTTTGCAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR GCA 90 bp | TACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAAATGTCTGAACCGCAGGGCTaGAGCCACTCTTCAATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YSAHISKQHQSVNDKRKMSEPQG*SHSSIN Trigger: ATTTATTGAAGAGTGGCTGCAGCCCTGCGGTTCAGA...CATTTTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR GCA 90 bp | ACTTTACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAGTGGGCTTAGTGTCTTaGAGCAGTACAGAACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TLLCTYQQTTSKRKRQEKVGLVS*SSTEPT Trigger: TGTTGGTTCTGTACTGCTGCAAGACACTAAGCCCAC...TTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR CCA 90 bp | CTTTACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAAAATCCCATTTTTAGGTaGTGGCGCATAGCCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LYSAHISKQHQSVNDKRKNPIFR*WRIARQ Trigger: TTGCCTGGCTATGCGCCACCACCTAAAAATGGGATT...TTTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTAAAG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR TCA 90 bp | ACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTATTAGTGCTCTGGAATaGTCAGGATTTCTAATACCT | + |
|
Preference number: 4 (lower is better) Translates to: TVVDEIDLMLHVQHKKSPISALE*SGFLIP Trigger: AGGTATTAGAAATCCTGATCATTCCAGAGCACTAAT...AGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR TCA 90 bp | GTTGCAAAAATCAGCTTCCATGGACTAAACATCCAAGAAAGAGTTTTGATGAATAAGATGGCTGATACATaGGAACCCCTTTGGTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VAKISFHGLNIQERVLMNKMADT*EPLWLD Trigger: GTCCAACCAAAGGGGTTCTCATGTATCAGCCATCTT...ATTCATCAAAACTCTTTCTTGGATGTTTAGTCCATGGAAGCTGATTTTTGCAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR GCA 90 bp | ATGCACAGTACAAAGATTATTTGCTTTGATGGGATCATGAAGAACAGAAAACCTCCACTCTTCAATAAATaGAACGCCCTCATCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MHSTKIICFDGIMKNRKPPLFNK*NALIRR Trigger: CCTCCTGATGAGGGCGTTGCATTTATTGAAGAGTGG...AGGTTTTCTGTTCTTCATGATCCCATCAAAGCAAATAATCTTTGTACTGTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR GCA 90 bp | GTTGCAAAAATCAGCTTCCATGGACTAAACATCCAAGAAAGAGTTTTGATGAATCCACTCTTCAATAAATaGAACGCCCTCATCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VAKISFHGLNIQERVLMNPLFNK*NALIRR Trigger: CCTCCTGATGAGGGCGTTGCATTTATTGAAGAGTGG...ATTCATCAAAACTCTTTCTTGGATGTTTAGTCCATGGAAGCTGATTTTTGCAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCAAAAATCAGCTTCCATGGACTAAACATCCAAGAAAGAGTTTTGATGAATAATCCCATTTTTAGGTaGTGGCGCATAGCCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VAKISFHGLNIQERVLMNNPIFR*WRIARQ Trigger: TTGCCTGGCTATGCGCCACCACCTAAAAATGGGATT...ATTCATCAAAACTCTTTCTTGGATGTTTAGTCCATGGAAGCTGATTTTTGCAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAATCTTGCTTGCATCACTaGCTACAGTCACTGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLLCTYQQTTSKRKRQEKSCLHH*LQSLNK Trigger: CTTGTTCAGTGACTGTAGCCAGTGATGCAAGCAAGA...TTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR CCA 90 bp | GTTGCAAAAATCAGCTTCCATGGACTAAACATCCAAGAAAGAGTTTTGATGAATAGATGCATTTCCTTTTaGCGGGAGGGTCTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VAKISFHGLNIQERVLMNRCISF*REGLPL Trigger: AAGAGGAAGACCCTCCCGCCAAAAGGAAATGCATCT...ATTCATCAAAACTCTTTCTTGGATGTTTAGTCCATGGAAGCTGATTTTTGCAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR CCA 90 bp | ATGCACAGTACAAAGATTATTTGCTTTGATGGGATCATGAAGAACAGAAAACCTCACCCTTACAGAAGATaGCTGATACATGAGAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: MHSTKIICFDGIMKNRKPHPYRR*LIHENP Trigger: GGGGTTCTCATGTATCAGCCATCTTCTGTAAGGGTG...AGGTTTTCTGTTCTTCATGATCCCATCAAAGCAAATAATCTTTGTACTGTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR CCA 90 bp | TACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAAATGATAGGAGGACAGTACTaGGGATCAACTGGAATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YSAHISKQHQSVNDKRKMIGGQY*GSTGIR Trigger: CCTTATTCCAGTTGATCCCCAGTACTGTCCTCCTAT...CATTTTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR TCA 90 bp | CTTTACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAACATCTTCCTGGAATTTaGTCTCATCCACATCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LYSAHISKQHQSVNDKRKHLPGI*SHPHQN Trigger: GTTCTGATGTGGATGAGATCAAATTCCAGGAAGATG...TTTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR TCA 90 bp | CTTTACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAAACTGGCTACAGTCACTaGACAAGGTTTACTAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LYSAHISKQHQSVNDKRKTGYSH*TRFTKD Trigger: GTCTTTAGTAAACCTTGTTCAGTGACTGTAGCCAGT...TTTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR GCA 90 bp | GTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTTGCATGCTTTCCAATTTCAGATaGCCAAGAAATAGAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VDEIDLMLHVQHKKSPCMLSNFR*PRNRNL Trigger: CAGATTTCTATTTCTTGGGCATCTGAAATTGGAAAG...CATGCAAGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR GCA 90 bp | ACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTCTTTCCAATTTCAGATaGCCAAGAAATAGAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVVDEIDLMLHVQHKKSPLSNFR*PRNRNL Trigger: CAGATTTCTATTTCTTGGGCATCTGAAATTGGAAAG...AGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR GCA 90 bp | CTTTACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAATATCTTCTTCTTGCTTaGATCACTGGCTACAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LYSAHISKQHQSVNDKRKYLLLA*ITGYSH Trigger: GTGACTGTAGCCAGTGATGCAAGCAAGAAGAAGATA...TTTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR CCA 90 bp | GTTGCAAAAATCAGCTTCCATGGACTAAACATCCAAGAAAGAGTTTTGATGAATATAGGAGGACAGTACTaGGGATCAACTGGAATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VAKISFHGLNIQERVLMNIGGQY*GSTGIR Trigger: CCTTATTCCAGTTGATCCCCAGTACTGTCCTCCTAT...ATTCATCAAAACTCTTTCTTGGATGTTTAGTCCATGGAAGCTGATTTTTGCAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR TCA 90 bp | TACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAAATGCAAGCTGAAAACCGATaGTTTGATTGTGGAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: YSAHISKQHQSVNDKRKMQAENR*FDCGKI Trigger: GATCTTTCCACAATCAAATCATCGGTTTTCAGCTTG...CATTTTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR TCA 90 bp | CTTTACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAACAAGAAATAGAAATCTaGTTTGGCACAGCTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LYSAHISKQHQSVNDKRKQEIEI*FGTAED Trigger: GTCTTCAGCTGTGCCAAATCAGATTTCTATTTCTTG...TTTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR GCA 90 bp | GTTGCAAAAATCAGCTTCCATGGACTAAACATCCAAGAAAGAGTTTTGATGAATCATCTATCTTCTTCTTaGTTGCATCACTGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: VAKISFHGLNIQERVLMNHLSSS*LHHWLQ Trigger: CTGTAGCCAGTGATGCAAGCAAGAAGAAGATAGATG...ATTCATCAAAACTCTTTCTTGGATGTTTAGTCCATGGAAGCTGATTTTTGCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR CCA 90 bp | ATGCACAGTACAAAGATTATTTGCTTTGATGGGATCATGAAGAACAGAAAACCTACTTTTGTACAGGGCTaGCTGGTTACTTTCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MHSTKIICFDGIMKNRKPTFVQG*LVTFIA Trigger: AGCTATGAAAGTAACCAGCCAGCCCTGTACAAAAGT...AGGTTTTCTGTTCTTCATGATCCCATCAAAGCAAATAATCTTTGTACTGTGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR CCA 90 bp | GTTGCAAAAATCAGCTTCCATGGACTAAACATCCAAGAAAGAGTTTTGATGAATGTACTGGGGATCAACTaGAATAAGGGAAAGAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: VAKISFHGLNIQERVLMNVLGIN*NKGKKI Trigger: GATTTTCTTTCCCTTATTCCAGTTGATCCCCAGTAC...ATTCATCAAAACTCTTTCTTGGATGTTTAGTCCATGGAAGCTGATTTTTGCAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR TCA 90 bp | ATGCACAGTACAAAGATTATTTGCTTTGATGGGATCATGAAGAACAGAAAACCTATTAGTGCTCTGGAATaGTCAGGATTTCTAATACCT | + |
|
Preference number: 4 (lower is better) Translates to: MHSTKIICFDGIMKNRKPISALE*SGFLIP Trigger: AGGTATTAGAAATCCTGATCATTCCAGAGCACTAAT...AGGTTTTCTGTTCTTCATGATCCCATCAAAGCAAATAATCTTTGTACTGTGCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS GCA 90 bp | AACTGCACATCAGGATGGACAGGAGGAATGGGCGGAGACGGCTGCTaGATCTCAAAGGTGGGCTTAGTGTCTTGCAGCAGTACAGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: NCTSGWTGGMGGDGC*ISKVGLVSCSSTEP Trigger: TGGTTCTGTACTGCTGCAAGACACTAAGCCCACCTTTGAGATGCAGCAGCCGTCTCCGCCCATTCCTCCTGTCCATCCTGATGTGCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114776.4 ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
||
| CDS GCA 90 bp | TTTAACTGCACATCAGGATGGACAGGAGGAATGGGCGGAGACGGCTaGTGCATCTCAAAGGTGGGCTTAGTGTCTTGCAGCAGTACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FNCTSGWTGGMGGDG*CISKVGLVSCSSTE Trigger: TTCTGTACTGCTGCAAGACACTAAGCCCACCTTTGAGATGCAGCAGCCGTCTCCGCCCATTCCTCCTGTCCATCCTGATGTGCAGTTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114776.4 ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTGGTGGTGACAGACGTACTGCTTGCTGTTAAGGGTGAGGTGAGACTATCCGGGATAGTTATCTTCTaGAGGGCAACTGGTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LVVVTDVLLAVKGEVRLSGIVIF*RATGLC Trigger: GCAGAGACCAGTTGCCCTCAAGAAGATAACTATCCC...GGATAGTCTCACCTCACCCTTAACAGCAAGCAGTACGTCTGTCACCACCACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
||
| CDS TCA 90 bp | TTAGTGTCTTGCAGCAGTACAGAACCAACAGGAGATGACGGTGAATaGGGTGTAATTGAAGTCGAAGGCAACGAGTGGATCCCAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LVSCSSTEPTGDDGE*GVIEVEGNEWIPAT Trigger: TGTGGCTGGGATCCACTCGTTGCCTTCGACTTCAATTACACCTCATTCACCGTCATCTCCTGTTGGTTCTGTACTGCTGCAAGACACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114776.4 ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
||
| CDS TCA 90 bp | AGTGTCCGTGGGTATCGGCGTCTATATAATTCTCGAATTTTAATCTaGACCGCAGGGCTGCAGCCACTCTTCAATAAATGCAACGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVRGYRRLYNSRILI*TAGLQPLFNKCNAL Trigger: GAGGGCGTTGCATTTATTGAAGAGTGGCTGCAGCCCTGCGGTTCAGATTAAAATTCGAGAATTATATAGACGCCGATACCCACGGACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114776.4 ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
||
| CDS GCA 90 bp | ACACAAACTATTGGGATAGTTATCTTCTTGAGGGCAACTGGTCTCTaGCAAGCAAAGTCGCAGCTGGACTTGGACTGTGTAGTCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TQTIGIVIFLRATGL*QAKSQLDLDCVVSP Trigger: AGGAGAGACTACACAGTCCAAGTCCAGCTGCGACTTTGCTTGGCAGAGACCAGTTGCCCTCAAGAAGATAACTATCCCAATAGTTTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114776.4 ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
||
| CDS-3UTR CAA 90 bp | CATCTGGTTCTTGCTGAAGTCATCGATGTTCATCTCTCAGAGAGCAAAGAATCCGGTGGGCTTAGTGTCTaGCAGCAGTACAGAACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HLVLAEVIDVHLSESKESGGLSV*QQYRTN Trigger: GTTGGTTCTGTACTGCTGCAAGACACTAAGCCCACC...GGATTCTTTGCTCTCTGAGAGATGAACATCGATGACTTCAGCAAGAACCAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
||
| CDS-3UTR CAA 90 bp | CATCTGGTTCTTGCTGAAGTCATCGATGTTCATCTCTCAGAGAGCAAAGAATCCCTGCACGGCACGGGATaGTCAGCCTCATTTTTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: HLVLAEVIDVHLSESKESLHGTG*SASFFL Trigger: TAGGAAAAATGAGGCTGACAATCCCGTGCCGTGCAG...GGATTCTTTGCTCTCTGAGAGATGAACATCGATGACTTCAGCAAGAACCAGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR CAA 90 bp | ACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTGGTGGGCTTAGTGTCTaGCAGCAGTACAGAACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TVVDEIDLMLHVQHKKSPGGLSV*QQYRTN Trigger: GTTGGTTCTGTACTGCTGCAAGACACTAAGCCCACC...AGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS-3UTR CAA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTGGGATAGTTATCTTCTaGAGGGCAACTGGTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSGIVIF*RATGLC Trigger: GCAGAGACCAGTTGCCCTCAAGAAGATAACTATCCC...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
||
| CDS-3UTR CAA 90 bp | GTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTTGCATGCTGCACGGCACGGGATaGTCAGCCTCATTTTTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: VDEIDLMLHVQHKKSPCMLHGTG*SASFFL Trigger: TAGGAAAAATGAGGCTGACAATCCCGTGCCGTGCAG...CATGCAAGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
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| CDS-3UTR CAA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTAAGATGCATTTCCTTTaGGCGGGAGGGTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSKMHFL*AGGSSS Trigger: AGAGGAAGACCCTCCCGCCAAAAGGAAATGCATCTT...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
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| CDS-3UTR CAA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTAATCTGATGACATGCTaGACACTGGCGTGTGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSNLMTC*TLACGG Trigger: TCCACCACACGCCAGTGTCAAGCATGTCATCAGATT...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
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| CDS-3UTR CAA 90 bp | GTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTTGCATGATCAGGAGGTCATGCTaGCGCCCACTTTTATTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VDEIDLMLHVQHKKSPCMIRRSC*RPLLFR Trigger: ACGGAATAAAAGTGGGCGCAAGCATGACCTCCTGAT...CATGCAAGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS-3UTR CAA 90 bp | GTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTTGCATGAATCTGATGACATGCTaGACACTGGCGTGTGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VDEIDLMLHVQHKKSPCMNLMTC*TLACGG Trigger: TCCACCACACGCCAGTGTCAAGCATGTCATCAGATT...CATGCAAGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
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| CDS CCA 90 bp | CTTTTATACACAAACTATTGGGATAGTTATCTTCTTGAGGGCAACTaGTCTCTGCCAAGCAAAGTCGCAGCTGGACTTGGACTGTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLYTNYWDSYLLEGN*SLPSKVAAGLGLCS Trigger: ACTACACAGTCCAAGTCCAGCTGCGACTTTGCTTGGCAGAGACCAGTTGCCCTCAAGAAGATAACTATCCCAATAGTTTGTGTATAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114776.4 ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS-3UTR CAA 90 bp | CTTTACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAAGGTGGGCTTAGTGTCTaGCAGCAGTACAGAACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LYSAHISKQHQSVNDKRKGGLSV*QQYRTN Trigger: GTTGGTTCTGTACTGCTGCAAGACACTAAGCCCACC...TTTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR CAA 90 bp | CCTTTGGTTGGACTGCTTTGTGTTTCTGACATAAAGATGCATTTCCTTTTGGCGACTAAACTCGTGGGCTaGATGAGAACATCAAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: PLVGLLCVSDIKMHFLLATKLVG*MRTSRT Trigger: TGTCCTTGATGTTCTCATCAAGCCCACGAGTTTAGT...CGCCAAAAGGAAATGCATCTTTATGTCAGAAACACAAAGCAGTCCAACCAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235135.2 |
||
| CDS-3UTR CAA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCATCTTCCTGGAATTaGATCTCATCCACATCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSPSSWN*ISSTSE Trigger: TTCTGATGTGGATGAGATCAAATTCCAGGAAGATGG...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR CAA 90 bp | GCCACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTTTGAACTTTCTACTTTaGTACAGGGCTGGCTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: ATVVDEIDLMLHVQHKKSLNFLL*YRAGWL Trigger: TAACCAGCCAGCCCTGTACAAAAGTAGAAAGTTCAA...ACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR CAA 90 bp | CATCTGGTTCTTGCTGAAGTCATCGATGTTCATCTCTCAGAGAGCAAAGAATCCACATCTATCTTCTTCTaGCTTGCATCACTGGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: HLVLAEVIDVHLSESKESTSIFF*LASLAT Trigger: TGTAGCCAGTGATGCAAGCAAGAAGAAGATAGATGT...GGATTCTTTGCTCTCTGAGAGATGAACATCGATGACTTCAGCAAGAACCAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR CAA 90 bp | GTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTTGCATGTACATGAGAACCCCTTaGGTTGGACTGCTTTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VDEIDLMLHVQHKKSPCMYMRTP*VGLLCV Trigger: AACACAAAGCAGTCCAACCAAAGGGGTTCTCATGTA...CATGCAAGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
||
| CDS-3UTR CAA 90 bp | GTTGCAAAAATCAGCTTCCATGGACTAAACATCCAAGAAAGAGTTTTGATGAATATCAGGAGGTCATGCTaGCGCCCACTTTTATTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VAKISFHGLNIQERVLMNIRRSC*RPLLFR Trigger: ACGGAATAAAAGTGGGCGCAAGCATGACCTCCTGAT...ATTCATCAAAACTCTTTCTTGGATGTTTAGTCCATGGAAGCTGATTTTTGCAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
||
| CDS-3UTR CAA 90 bp | CATCTGGTTCTTGCTGAAGTCATCGATGTTCATCTCTCAGAGAGCAAAGAATCCACATATTTCTCTAACTaGCTGAGGTGTCAAAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HLVLAEVIDVHLSESKESTYFSN*LRCQSK Trigger: TTTGCTTTGACACCTCAGCAAGTTAGAGAAATATGT...GGATTCTTTGCTCTCTGAGAGATGAACATCGATGACTTCAGCAAGAACCAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
||
| CDS-3UTR CAA 90 bp | ATGCACAGTACAAAGATTATTTGCTTTGATGGGATCATGAAGAACAGAAAACCTGGGATAGTTATCTTCTaGAGGGCAACTGGTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MHSTKIICFDGIMKNRKPGIVIF*RATGLC Trigger: GCAGAGACCAGTTGCCCTCAAGAAGATAACTATCCC...AGGTTTTCTGTTCTTCATGATCCCATCAAAGCAAATAATCTTTGTACTGTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR CAA 90 bp | TTACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAAATAAGATGCATTTCCTTTaGGCGGGAGGGTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLCTYQQTTSKRKRQEKNKMHFL*AGGSSS Trigger: AGAGGAAGACCCTCCCGCCAAAAGGAAATGCATCTT...ATTTTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR CAA 90 bp | ACCGTTGTGGATGAGATAGATCTGATGCTCCATGTACAGCATAAGAAAAGTCCTACATATTTCTCTAACTaGCTGAGGTGTCAAAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TVVDEIDLMLHVQHKKSPTYFSN*LRCQSK Trigger: TTTGCTTTGACACCTCAGCAAGTTAGAGAAATATGT...AGGACTTTTCTTATGCTGTACATGGAGCATCAGATCTATCTCATCCACAACGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
||
| CDS-3UTR CAA 90 bp | CTTTACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAATACATGAGAACCCCTTaGGTTGGACTGCTTTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LYSAHISKQHQSVNDKRKYMRTP*VGLLCV Trigger: AACACAAAGCAGTCCAACCAAAGGGGTTCTCATGTA...TTTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR CAA 90 bp | ATGCACAGTACAAAGATTATTTGCTTTGATGGGATCATGAAGAACAGAAAACCTACTAAACTCGTGGGCTaGATGAGAACATCAAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: MHSTKIICFDGIMKNRKPTKLVG*MRTSRT Trigger: TGTCCTTGATGTTCTCATCAAGCCCACGAGTTTAGT...AGGTTTTCTGTTCTTCATGATCCCATCAAAGCAAATAATCTTTGTACTGTGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR CAA 90 bp | GTTGCAAAAATCAGCTTCCATGGACTAAACATCCAAGAAAGAGTTTTGATGAATACTAAACTCGTGGGCTaGATGAGAACATCAAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: VAKISFHGLNIQERVLMNTKLVG*MRTSRT Trigger: TGTCCTTGATGTTCTCATCAAGCCCACGAGTTTAGT...ATTCATCAAAACTCTTTCTTGGATGTTTAGTCCATGGAAGCTGATTTTTGCAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
||
| CDS-3UTR CAA 90 bp | ATGCACAGTACAAAGATTATTTGCTTTGATGGGATCATGAAGAACAGAAAACCTCCATCTTCCTGGAATTaGATCTCATCCACATCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: MHSTKIICFDGIMKNRKPPSSWN*ISSTSE Trigger: TTCTGATGTGGATGAGATCAAATTCCAGGAAGATGG...AGGTTTTCTGTTCTTCATGATCCCATCAAAGCAAATAATCTTTGTACTGTGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
||
| CDS-3UTR CAA 90 bp | GTTGCAAAAATCAGCTTCCATGGACTAAACATCCAAGAAAGAGTTTTGATGAATTTGAACTTTCTACTTTaGTACAGGGCTGGCTGGTTA | + |
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Preference number: 5 (lower is better) Translates to: VAKISFHGLNIQERVLMNLNFLL*YRAGWL Trigger: TAACCAGCCAGCCCTGTACAAAAGTAGAAAGTTCAA...ATTCATCAAAACTCTTTCTTGGATGTTTAGTCCATGGAAGCTGATTTTTGCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 |
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| CDS-3UTR CAA 90 bp | AGAAGAAAAGTAGAACCCAAATTCTGGCCAGTTATTGACACTTCATTACTTCAAACATCTATCTTCTTCTaGCTTGCATCACTGGCTACA | + |
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Preference number: 5 (lower is better) Translates to: RRKVEPKFWPVIDTSLLQTSIFF*LASLAT Trigger: TGTAGCCAGTGATGCAAGCAAGAAGAAGATAGATGT...TTGAAGTAATGAAGTGTCAATAACTGGCCAGAATTTGGGTTCTACTTTTCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
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| CDS-3UTR CAA 90 bp | TACTCTGCACATATCAGCAAACAACATCAAAGCGTAAACGACAAGAGAAAAATGCTGAAAACCGATGATTaGATTGTGGAAAGATCACAA | + |
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Preference number: 5 (lower is better) Translates to: YSAHISKQHQSVNDKRKMLKTDD*IVERSQ Trigger: TTGTGATCTTTCCACAATCAAATCATCGGTTTTCAG...CATTTTTCTCTTGTCGTTTACGCTTTGATGTTGTTTGCTGATATGTGCAGAGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114777.10 |
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| CDS-3UTR CAA 90 bp | GTTGCAAAAATCAGCTTCCATGGACTAAACATCCAAGAAAGAGTTTTGATGAATCTGAAAACCGATGATTaGATTGTGGAAAGATCACAA | + |
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Preference number: 5 (lower is better) Translates to: VAKISFHGLNIQERVLMNLKTDD*IVERSQ Trigger: TTGTGATCTTTCCACAATCAAATCATCGGTTTTCAG...ATTCATCAAAACTCTTTCTTGGATGTTTAGTCCATGGAAGCTGATTTTTGCAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS-3UTR CAA 90 bp | AGAAGAAAAGTAGAACCCAAATTCTGGCCAGTTATTGACACTTCATTACTTCAACTGAAAACCGATGATTaGATTGTGGAAAGATCACAA | + |
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Preference number: 5 (lower is better) Translates to: RRKVEPKFWPVIDTSLLQLKTDD*IVERSQ Trigger: TTGTGATCTTTCCACAATCAAATCATCGGTTTTCAG...TTGAAGTAATGAAGTGTCAATAACTGGCCAGAATTTGGGTTCTACTTTTCTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000235135.2 |
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| CDS-3UTR CAA 90 bp | AGAAGAAAAGTAGAACCCAAATTCTGGCCAGTTATTGACACTTCATTACTTCAAACATATTTCTCTAACTaGCTGAGGTGTCAAAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: RRKVEPKFWPVIDTSLLQTYFSN*LRCQSK Trigger: TTTGCTTTGACACCTCAGCAAGTTAGAGAAATATGT...TTGAAGTAATGAAGTGTCAATAACTGGCCAGAATTTGGGTTCTACTTTTCTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114777.10 ENSMUST00000235135.2 |
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| CDS GCA 72 bp | TCAGGATGGACAGGAGGAATGGGCGGAGACGGCTGCTaGATCTCAAAGGTGGGCTTAGTGTCTTGCAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: SGWTGGMGGDGC*ISKVGLVSCSS Trigger: ACTGCTGCAAGACACTAAGCCCACCTTTGAGATGCAGCAGCCGTCTCCGCCCATTCCTCCTGTCCATCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114776.4 ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS GCA 72 bp | ACATCAGGATGGACAGGAGGAATGGGCGGAGACGGCTaGTGCATCTCAAAGGTGGGCTTAGTGTCTTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TSGWTGGMGGDG*CISKVGLVSCS Trigger: GCTGCAAGACACTAAGCCCACCTTTGAGATGCAGCAGCCGTCTCCGCCCATTCCTCCTGTCCATCCTGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114776.4 ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS CAA 72 bp | GCAACTGGTCTCTGCCAAGCAAAGTCGCAGCTGGACTaGGACTGTGTAGTCTCTCCTGCCACCCGGCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: ATGLCQAKSQLD*DCVVSPATRQK Trigger: TTTTTGCCGGGTGGCAGGAGAGACTACACAGTCCAAGTCCAGCTGCGACTTTGCTTGGCAGAGACCAGTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114776.4 ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS CCA 72 bp | GCGTCCAGGGCGCTTCTGTTCAATCCCATTTTTAGGTaGTGGCGCATAGCCAGGCAAAGGAAAGAGTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: ASRALLFNPIFR*WRIARQRKEFP Trigger: GGGAAACTCTTTCCTTTGCCTGGCTATGCGCCACCACCTAAAAATGGGATTGAACAGAAGCGCCCTGGACGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114776.4 ENSMUST00000114777.10 ENSMUST00000168882.9 |
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| CDS GCA 72 bp | GACGGCTGCTGCATCTCAAAGGTGGGCTTAGTGTCTTaGAGCAGTACAGAACCAACAGGAGATGACGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: DGCCISKVGLVS*SSTEPTGDDGE Trigger: TTCACCGTCATCTCCTGTTGGTTCTGTACTGCTGCAAGACACTAAGCCCACCTTTGAGATGCAGCAGCCGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114776.4 ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS CCA 72 bp | TCCAGGGCGCTTCTGTTCAATCCCATTTTTAGGTGGTaGCGCATAGCCAGGCAAAGGAAAGAGTTTCCCATT | + |
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Preference number: 6 (lower is better) Translates to: SRALLFNPIFRW*RIARQRKEFPI Trigger: AATGGGAAACTCTTTCCTTTGCCTGGCTATGCGCCACCACCTAAAAATGGGATTGAACAGAAGCGCCCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114776.4 ENSMUST00000114777.10 ENSMUST00000168882.9 |
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| CDS GCA 72 bp | ATTGGGATAGTTATCTTCTTGAGGGCAACTGGTCTCTaGCAAGCAAAGTCGCAGCTGGACTTGGACTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: IGIVIFLRATGL*QAKSQLDLDCV Trigger: TACACAGTCCAAGTCCAGCTGCGACTTTGCTTGGCAGAGACCAGTTGCCCTCAAGAAGATAACTATCCCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114776.4 ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS TCA 72 bp | GGGTATCGGCGTCTATATAATTCTCGAATTTTAATCTaGACCGCAGGGCTGCAGCCACTCTTCAATAAATGC | + |
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Preference number: 6 (lower is better) Translates to: GYRRLYNSRILI*TAGLQPLFNKC Trigger: GCATTTATTGAAGAGTGGCTGCAGCCCTGCGGTTCAGATTAAAATTCGAGAATTATATAGACGCCGATACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114776.4 ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS CAA 90 bp | TTTCCCATTGACTTTTATACACAAACTATTGGGATAGTTATCTTCTaGAGGGCAACTGGTCTCTGCCAAGCAAAGTCGCAGCTGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: FPIDFYTQTIGIVIF*RATGLCQAKSQLDL Trigger: CAAGTCCAGCTGCGACTTTGCTTGGCAGAGACCAGTTGCCCTCAAGAAGATAACTATCCCAATAGTTTGTGTATAAAAGTCAATGGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114776.4 ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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| CDS CAA 72 bp | GACTTTTATACACAAACTATTGGGATAGTTATCTTCTaGAGGGCAACTGGTCTCTGCCAAGCAAAGTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: DFYTQTIGIVIF*RATGLCQAKSQ Trigger: CTGCGACTTTGCTTGGCAGAGACCAGTTGCCCTCAAGAAGATAACTATCCCAATAGTTTGTGTATAAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114776.4 ENSMUST00000114777.10 ENSMUST00000168882.9 ENSMUST00000235135.2 |
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