RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIAS1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032405

Ensembl transcript IDs: ENSMUST00000098651.6, ENSMUST00000214830.2, ENSMUST00000215501.2, ENSMUST00000216209.2

Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAAGGTTTTCAGGACAGGGACCATGCCTGCTTCCGGATCCCCGATaGCCTACTAGGGTTCATGCTGAGCGGGTGCCCATTCTTCAGAAC +
Preference number: 1 (lower is better)
Translates to: GRFSGQGPCLLPDPR*PTRVHAERVPILQN
Trigger: GTTCTGAAGAATGGGCACCCGCTCAGCATGAACCCTAGTAGGTCATCGGGGATCCGGAAGCAGGCATGGTCCCTGTCCTGAAAACCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR GCA 90 bp GCCACATCTTGTTTCCTGGAAGGTTTTCAGGACAGGGACCATGCCTaGTTCCGGATCCCCGATGACCTACTAGGGTTCATGCTGAGCGGG +
Preference number: 1 (lower is better)
Translates to: ATSCFLEGFQDRDHA*FRIPDDLLGFMLSG
Trigger: CCCGCTCAGCATGAACCCTAGTAGGTCATCGGGGATCCGGAAGCAGGCATGGTCCCTGTCCTGAAAACCTTCCAGGAAACAAGATGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR TCA 90 bp ACAAGAGTGATAATAACCAAATGCAAACTGAGGAGGAGGGGCGAGTaGCGACAGAACAGCACATACAGGTACACAGGCGCTCTTGCGCGC +
Preference number: 1 (lower is better)
Translates to: TRVIITKCKLRRRGE*RQNSTYRYTGALAR
Trigger: GCGCGCAAGAGCGCCTGTGTACCTGTATGTGCTGTTCTGTCGTCACTCGCCCCTCCTCCTCAGTTTGCATTTGGTTATTATCACTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR TCA 90 bp TTATCTGTCCACAGCCTATTAATCAAGGTTGGCAGGGCTGGGGAGTaGGGTCGGCCTAAGGAAAAACGACAACAACGGGACAAAGTGACC +
Preference number: 1 (lower is better)
Translates to: LSVHSLLIKVGRAGE*GRPKEKRQQRDKVT
Trigger: GGTCACTTTGTCCCGTTGTTGTCGTTTTTCCTTAGGCCGACCTCACTCCCCAGCCCTGCCAACCTTGATTAATAGGCTGTGGACAGATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR TCA 90 bp CATGCTGTGGGCCTTGCTTGGATTGTCCCTTTCCCAAAATCTCTTTaGTCAGCCAGCTTGGTGGCTCAGCAGGTAAAGTGCTTGCTGTGT +
Preference number: 1 (lower is better)
Translates to: HAVGLAWIVPFPKSL*SASLVAQQVKCLLC
Trigger: ACACAGCAAGCACTTTACCTGCTGAGCCACCAAGCTGGCTGATCAAAGAGATTTTGGGAAAGGGACAATCCAAGCAAGGCCCACAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR GCA 90 bp GACCTACTAGGGTTCATGCTGAGCGGGTGCCCATTCTTCAGAACATaGTGTGGGCCTTGCTTGGATTGTCCCTTTCCCAAAATCTCTTTG +
Preference number: 1 (lower is better)
Translates to: DLLGFMLSGCPFFRT*CGPCLDCPFPKISL
Trigger: CAAAGAGATTTTGGGAAAGGGACAATCCAAGCAAGGCCCACAGCATGTTCTGAAGAATGGGCACCCGCTCAGCATGAACCCTAGTAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR TCA 90 bp TTGGTGGCTCAGCAGGTAAAGTGCTTGCTGTGTAGCCCAACTATTTaGGATCAATGGGTGGAGCACATACAGAAGTGGAGAGGGCTGACT +
Preference number: 1 (lower is better)
Translates to: LVAQQVKCLLCSPTI*DQWVEHIQKWRGLT
Trigger: AGTCAGCCCTCTCCACTTCTGTATGTGCTCCACCCATTGATCTCAAATAGTTGGGCTACACAGCAAGCACTTTACCTGCTGAGCCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR GCA 90 bp AATTCAGACTTAGAATCAACAGAAGTGTATTGTCATTCGAGGGCCTaGCCACAGACTGCGCATCCAAGCAGCGTTTGCTCCAGCACTTCT +
Preference number: 1 (lower is better)
Translates to: NSDLESTEVYCHSRA*PQTAHPSSVCSSTS
Trigger: AGAAGTGCTGGAGCAAACGCTGCTTGGATGCGCAGTCTGTGGGCAGGCCCTCGAATGACAATACACTTCTGTTGATTCTAAGTCTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR TCA 90 bp ACATGCCAGAGGGAGAGACTAAGGAAGGAGCTCCTGGCAGCTTGCTaGATCAAAGATGCTGAGAACATTATCTGTCCACAGCCTATTAAT +
Preference number: 1 (lower is better)
Translates to: TCQRERLRKELLAAC*IKDAENIICPQPIN
Trigger: ATTAATAGGCTGTGGACAGATAATGTTCTCAGCATCTTTGATTCAGCAAGCTGCCAGGAGCTCCTTCCTTAGTCTCTCCCTCTGGCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR TCA 90 bp AAATTAAAAGCCACCTCTACCCTCCTGGCTGAATGGCTACTTTATTaGTGGTGTGTGCTTACAGAAAGACGGGAGCACACACACGATACT +
Preference number: 1 (lower is better)
Translates to: KLKATSTLLAEWLLY*WCVLTERREHTHDT
Trigger: AGTATCGTGTGTGTGCTCCCGTCTTTCTGTAAGCACACACCATCAATAAAGTAGCCATTCAGCCAGGAGGGTAGAGGTGGCTTTTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR TCA 90 bp AGATCACAGAGGATCTGGGATGGAGAACATGCACCTAGGGAGAGTTaGGAAAGATGCTCACACAAGAGTGATAATAACCAAATGCAAACT +
Preference number: 1 (lower is better)
Translates to: RSQRIWDGEHAPRES*ERCSHKSDNNQMQT
Trigger: AGTTTGCATTTGGTTATTATCACTCTTGTGTGAGCATCTTTCTCAACTCTCCCTAGGTGCATGTTCTCCATCCCAGATCCTCTGTGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR TCA 90 bp ACCTGGATTAATACCTACCGGTCCTTCTGTTATGGATGCAAGGCTTaGAAACAAGTTTACCACACACAAAGATGGTCCTTCCACAACTCT +
Preference number: 1 (lower is better)
Translates to: TWINTYRSFCYGCKA*KQVYHTQRWSFHNS
Trigger: AGAGTTGTGGAAGGACCATCTTTGTGTGTGGTAAACTTGTTTTCAAGCCTTGCATCCATAACAGAAGGACCGGTAGGTATTAATCCAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR GCA 90 bp GAAGATCCTCAAGGAAAACTTGTTACCCTGTTGCCAAAATGCAAGTaGTCACAGCCTTGGATTACATACAGAATACTGGCAATTCAGACT +
Preference number: 1 (lower is better)
Translates to: EDPQGKLVTLLPKCK*SQPWITYRILAIQT
Trigger: AGTCTGAATTGCCAGTATTCTGTATGTAATCCAAGGCTGTGAGCACTTGCATTTTGGCAACAGGGTAACAAGTTTTCCTTGAGGATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR GCA 90 bp TGGTATGAAGATCCTCAAGGAAAACTTGTTACCCTGTTGCCAAAATaGAAGTGCTCACAGCCTTGGATTACATACAGAATACTGGCAATT +
Preference number: 1 (lower is better)
Translates to: WYEDPQGKLVTLLPK*KCSQPWITYRILAI
Trigger: AATTGCCAGTATTCTGTATGTAATCCAAGGCTGTGAGCACTTGCATTTTGGCAACAGGGTAACAAGTTTTCCTTGAGGATCTTCATACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR CCA 90 bp TGCCAAAATGCAAGTGCTCACAGCCTTGGATTACATACAGAATACTaGCAATTCAGACTTAGAATCAACAGAAGTGTATTGTCATTCGAG +
Preference number: 1 (lower is better)
Translates to: CQNASAHSLGLHTEY*QFRLRINRSVLSFE
Trigger: CTCGAATGACAATACACTTCTGTTGATTCTAAGTCTGAATTGCCAGTATTCTGTATGTAATCCAAGGCTGTGAGCACTTGCATTTTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR GCA 90 bp CCAAACCCATCCCCACAACAAAGCCCACAATTTAAACCTCATACATaGAATTGTTTCCGTTATTGCAAGAAAGATAATGCCATTGAAGTA +
Preference number: 1 (lower is better)
Translates to: PNPSPQQSPQFKPHT*NCFRYCKKDNAIEV
Trigger: TACTTCAATGGCATTATCTTTCTTGCAATAACGGAAACAATTGCATGTATGAGGTTTAAATTGTGGGCTTTGTTGTGGGGATGGGTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR-3UTR TCA 90 bp CCCTCCTGGCTGAATGGCTACTTTATTGATGGTGTGTGCTTACAGAAAGACGGGAGGAGGAGGGGCGAGTaGCGACAGAACAGCACATAC +
Preference number: 2 (lower is better)
Translates to: PSWLNGYFIDGVCLQKDGRRRGE*RQNSTY
Trigger: GTATGTGCTGTTCTGTCGTCACTCGCCCCTCCTCCT...CCCGTCTTTCTGTAAGCACACACCATCAATAAAGTAGCCATTCAGCCAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR CAA 90 bp CTACACAGGTCAGGCAGGGGTTACAATCAGTCTACTAGCCACATCTaGTTTCCTGGAAGGTTTTCAGGACAGGGACCATGCCTGCTTCCG +
Preference number: 2 (lower is better)
Translates to: LHRSGRGYNQSTSHI*FPGRFSGQGPCLLP
Trigger: CGGAAGCAGGCATGGTCCCTGTCCTGAAAACCTTCCAGGAAACAAGATGTGGCTAGTAGACTGATTGTAACCCCTGCCTGACCTGTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR-3UTR CCA 90 bp ATCACACACACCCTCCCTCAGGTCTACACAGGTCAGGCAGGGGTTACAATCAGTGCTGTGGGCCTTGCTTaGATTGTCCCTTTCCCAAAA +
Preference number: 2 (lower is better)
Translates to: ITHTLPQVYTGQAGVTISAVGLA*IVPFPK
Trigger: TTTTGGGAAAGGGACAATCCAAGCAAGGCCCACAGC...ACTGATTGTAACCCCTGCCTGACCTGTGTAGACCTGAGGGAGGGTGTGTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR CAA 90 bp ACATGCTGTGGGCCTTGCTTGGATTGTCCCTTTCCCAAAATCTCTTaGATCAGCCAGCTTGGTGGCTCAGCAGGTAAAGTGCTTGCTGTG +
Preference number: 2 (lower is better)
Translates to: TCCGPCLDCPFPKIS*ISQLGGSAGKVLAV
Trigger: CACAGCAAGCACTTTACCTGCTGAGCCACCAAGCTGGCTGATCAAAGAGATTTTGGGAAAGGGACAATCCAAGCAAGGCCCACAGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR-3UTR TCA 90 bp GTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTATTCCTCCAGTTACCCCACAGGACAAATGGTaGAGTCTTCAGAATCCAGAA +
Preference number: 2 (lower is better)
Translates to: VLPWGHDQSHRASIPPVTPQDKW*SLQNPE
Trigger: TTCTGGATTCTGAAGACTTCACCATTTGTCCTGTGG...GGTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR-3UTR GCA 90 bp AGACAACCAAACGGCTTGTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATGTGATAATAACCAAATaGAAACTGAGGAGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: RQPNGLFSRGDMTKATGHVIITK*KLRRRG
Trigger: GCCCCTCCTCCTCAGTTTGCATTTGGTTATTATCAC...ATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAACAAGCCGTTTGGTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR-3UTR GCA 90 bp AGACAACCAAACGGCTTGTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATGCATGCTTTCTTCTCTaGGGACTCTCAAGTATGAGA +
Preference number: 2 (lower is better)
Translates to: RQPNGLFSRGDMTKATGHACFLL*GLSSMR
Trigger: TCTCATACTTGAGAGTCCGCAGAGAAGAAAGCATGC...ATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAACAAGCCGTTTGGTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR-3UTR CCA 90 bp CTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTATTCCTCCAGTTACCGGCAAGTGCTCACAGCCTTaGATTACATACAGAATACTG +
Preference number: 2 (lower is better)
Translates to: LPWGHDQSHRASIPPVTGKCSQP*ITYRIL
Trigger: CAGTATTCTGTATGTAATCCAAGGCTGTGAGCACTT...GCCGGTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR-3UTR TCA 90 bp AGACAACCAAACGGCTTGTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATACACAAGCTCTGTCTTaGAAACAAAGGGTATGCAGT +
Preference number: 2 (lower is better)
Translates to: RQPNGLFSRGDMTKATGHTQALS*KQRVCS
Trigger: ACTGCATACCCTTTGTTTTCAAGACAGAGCTTGTGT...ATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAACAAGCCGTTTGGTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR-3UTR TCA 90 bp CTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTATTCCTCCAGTTACCGGCAAGACACAGTCATCATaGCTTCTACCTGGATTAATA +
Preference number: 2 (lower is better)
Translates to: LPWGHDQSHRASIPPVTGKTQSS*LLPGLI
Trigger: TATTAATCCAGGTAGAAGTCATGATGACTGTGTCTT...GCCGGTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR-3UTR TCA 90 bp ACAGAGCACAGACAACTTACCACTGGCTATATCACTGAAGAAAATGTCTCCCCCAGAAGTGGAGAGGGCTaGCTCCACACAGCTGTCCTT +
Preference number: 2 (lower is better)
Translates to: TEHRQLTTGYITEENVSPRSGEG*LHTAVL
Trigger: AAGGACAGCTGTGTGGAGTCAGCCCTCTCCACTTCT...GGGGGAGACATTTTCTTCAGTGATATAGCCAGTGGTAAGTTGTCTGTGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR-3UTR GCA 90 bp AGACAACCAAACGGCTTGTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATTTGCCAAAATGCAAGTaGTCACAGCCTTGGATTACA +
Preference number: 2 (lower is better)
Translates to: RQPNGLFSRGDMTKATGHLPKCK*SQPWIT
Trigger: TGTAATCCAAGGCTGTGAGCACTTGCATTTTGGCAA...ATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAACAAGCCGTTTGGTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR-3UTR GCA 90 bp CTTCCTTCTTTTCTTTCGGTGGAACGGAACGACCTCTGCCAGCTCCACACCCCAAACTTGTTACCCTGTTaGCAAAATGCAAGTGCTCAC +
Preference number: 2 (lower is better)
Translates to: LPSFLSVERNDLCQLHTPNLLPC*QNASAH
Trigger: GTGAGCACTTGCATTTTGGCAACAGGGTAACAAGTT...TGGGGTGTGGAGCTGGCAGAGGTCGTTCCGTTCCACCGAAAGAAAAGAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR-3UTR TCA 90 bp GTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTATTCCTCCAGTTACCCATCCCATTTTGGTATaGAGATCCTCAAGGAAAACT +
Preference number: 2 (lower is better)
Translates to: VLPWGHDQSHRASIPPVTHPILV*RSSRKT
Trigger: AGTTTTCCTTGAGGATCTTCATACCAAAATGGGATG...GGTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR-3UTR TCA 90 bp AAAAGACAAATTCATCACACACACCCTCCCTCAGGTCTACACAGGTCAGGCAGGTTCCCAAAATCTCTTTaGTCAGCCAGCTTGGTGGCT +
Preference number: 2 (lower is better)
Translates to: KRQIHHTHPPSGLHRSGRFPKSL*SASLVA
Trigger: AGCCACCAAGCTGGCTGATCAAAGAGATTTTGGGAA...CCTGCCTGACCTGTGTAGACCTGAGGGAGGGTGTGTGTGATGAATTTGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR-3UTR GCA 90 bp TACCCTGTTGCCAAAATGCAAGTGCTCACAGCCTTGGATTACATACAGAATACTTGTCATTCGAGGGCCTaGCCACAGACTGCGCATCCA +
Preference number: 2 (lower is better)
Translates to: YPVAKMQVLTALDYIQNTCHSRA*PQTAHP
Trigger: TGGATGCGCAGTCTGTGGGCAGGCCCTCGAATGACA...AGTATTCTGTATGTAATCCAAGGCTGTGAGCACTTGCATTTTGGCAACAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR-3UTR GCA 90 bp TTACCACTGGCTATATCACTGAAGAAAATGTCTCCCCCATTAACCATTAACTGCTCAGGACAGGGACCATaGCTGCTTCCGGATCCCCGA +
Preference number: 2 (lower is better)
Translates to: LPLAISLKKMSPPLTINCSGQGP*LLPDPR
Trigger: TCGGGGATCCGGAAGCAGGCATGGTCCCTGTCCTGA...GCAGTTAATGGTTAATGGGGGAGACATTTTCTTCAGTGATATAGCCAGTGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR-3UTR CCA 90 bp CCTAGCTGGTCTCCTTCCTTTTCCAACAGTCCACTTCAAATGTCAGTGTTGCTTCTTCAGAACATGCTGTaGGCCTTGCTTGGATTGTCC +
Preference number: 2 (lower is better)
Translates to: PSWSPSFSNSPLQMSVLLLQNML*ALLGLS
Trigger: GGACAATCCAAGCAAGGCCCACAGCATGTTCTGAAG...AAGCAACACTGACATTTGAAGTGGACTGTTGGAAAAGGAAGGAGACCAGCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR-3UTR GCA 90 bp CCCTCCTGGCTGAATGGCTACTTTATTGATGGTGTGTGCTTACAGAAAGACGGGTTGCCAAAATGCAAGTaGTCACAGCCTTGGATTACA +
Preference number: 2 (lower is better)
Translates to: PSWLNGYFIDGVCLQKDGLPKCK*SQPWIT
Trigger: TGTAATCCAAGGCTGTGAGCACTTGCATTTTGGCAA...CCCGTCTTTCTGTAAGCACACACCATCAATAAAGTAGCCATTCAGCCAGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR-3UTR GCA 90 bp TTTTCTAAAAAGACAAATTCATCACACACACCCTCCCTCAGGTCTACACAGGTCACATGCTGTGGGCCTTaGTTGGATTGTCCCTTTCCC +
Preference number: 2 (lower is better)
Translates to: FSKKTNSSHTPSLRSTQVTCCGP*LDCPFP
Trigger: GGGAAAGGGACAATCCAAGCAAGGCCCACAGCATGT...GACCTGTGTAGACCTGAGGGAGGGTGTGTGTGATGAATTTGTCTTTTTAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR-3UTR GCA 90 bp AAAAGCCATTTTACTGGTTTGGCATGCGGTATGGAAATTCTAAGAGAGAAAGTCGAGCTGGTGATGGTGTaGCCTGGCTCTCTGCAGTTA +
Preference number: 2 (lower is better)
Translates to: KSHFTGLACGMEILREKVELVMV*PGSLQL
Trigger: TAACTGCAGAGAGCCAGGGCACACCATCACCAGCTC...GACTTTCTCTCTTAGAATTTCCATACCGCATGCCAAACCAGTAAAATGGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR-3UTR CCA 90 bp CTAGCTGGTCTCCTTCCTTTTCCAACAGTCCACTTCAAATGTCAGTGTTGCTTACCACATCTTGTTTCCTaGAAGGTTTTCAGGACAGGG +
Preference number: 2 (lower is better)
Translates to: LAGLLPFPTVHFKCQCCLPHLVS*KVFRTG
Trigger: CCCTGTCCTGAAAACCTTCCAGGAAACAAGATGTGG...TAAGCAACACTGACATTTGAAGTGGACTGTTGGAAAAGGAAGGAGACCAGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR-3UTR TCA 90 bp TATTTATATACATCTTCCCCTATGTTAATAAAACAGCAGCAGCACGCTCTGGGAGACACCGAAGGAAAGTaGCCCCTCTATAGCTGGCAT +
Preference number: 2 (lower is better)
Translates to: YLYTSSPMLIKQQQHALGDTEGK*PLYSWH
Trigger: ATGCCAGCTATAGAGGGGTCACTTTCCTTCGGTGTC...TCCCAGAGCGTGCTGCTGCTGTTTTATTAACATAGGGGAAGATGTATATAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR-3UTR GCA 90 bp CCCCTAGCTGGTCTCCTTCCTTTTCCAACAGTCCACTTCAAATGTCAGTGTTGCCCATTAACCATTAACTaGCTACAAATCTTAGGCTTC +
Preference number: 2 (lower is better)
Translates to: PLAGLLPFPTVHFKCQCCPLTIN*LQILGF
Trigger: GAAGCCTAAGATTTGTAGGCAGTTAATGGTTAATGG...GCAACACTGACATTTGAAGTGGACTGTTGGAAAAGGAAGGAGACCAGCTAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR-3UTR GCA 90 bp TATTTATATACATCTTCCCCTATGTTAATAAAACAGCAGCAGCACGCTCTGGGAACCCTGTTGCCAAAATaGAAGTGCTCACAGCCTTGG +
Preference number: 2 (lower is better)
Translates to: YLYTSSPMLIKQQQHALGTLLPK*KCSQPW
Trigger: CCAAGGCTGTGAGCACTTGCATTTTGGCAACAGGGT...TCCCAGAGCGTGCTGCTGCTGTTTTATTAACATAGGGGAAGATGTATATAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR-3UTR GCA 90 bp AAAAGCCATTTTACTGGTTTGGCATGCGGTATGGAAATTCTAAGAGAGAAAGTCGCATCCTCCATCAGTTaGCATCTATCTCCCACTGTC +
Preference number: 2 (lower is better)
Translates to: KSHFTGLACGMEILREKVASSIS*HLSPTV
Trigger: GACAGTGGGAGATAGATGGCAACTGATGGAGGATGC...GACTTTCTCTCTTAGAATTTCCATACCGCATGCCAAACCAGTAAAATGGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR-3UTR CCA 90 bp AAAAGCCATTTTACTGGTTTGGCATGCGGTATGGAAATTCTAAGAGAGAAAGTCCCAAGTCATTTAATCTaGGATGGGGTGGGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: KSHFTGLACGMEILREKVPSHLI*DGVGAA
Trigger: TGCTGCTCCCACCCCATCCCAGATTAAATGACTTGG...GACTTTCTCTCTTAGAATTTCCATACCGCATGCCAAACCAGTAAAATGGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR-3UTR TCA 90 bp AAAAGCCATTTTACTGGTTTGGCATGCGGTATGGAAATTCTAAGAGAGAAAGTCGTCCTTCCACAACTCTaGAAACATGAAGGTGGGACA +
Preference number: 2 (lower is better)
Translates to: KSHFTGLACGMEILREKVVLPQL*KHEGGT
Trigger: TGTCCCACCTTCATGTTTTCAGAGTTGTGGAAGGAC...GACTTTCTCTCTTAGAATTTCCATACCGCATGCCAAACCAGTAAAATGGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR CAA 90 bp AGGAAAACTTGTTACCCTGTTGCCAAAATGCAAGTGCTCACAGCCTaGGATTACATACAGAATACTGGCAATTCAGACTTAGAATCAACA +
Preference number: 2 (lower is better)
Translates to: RKTCYPVAKMQVLTA*DYIQNTGNSDLEST
Trigger: TGTTGATTCTAAGTCTGAATTGCCAGTATTCTGTATGTAATCCAAGGCTGTGAGCACTTGCATTTTGGCAACAGGGTAACAAGTTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR-3UTR GCA 90 bp TATTTATATACATCTTCCCCTATGTTAATAAAACAGCAGCAGCACGCTCTGGGAAACTTGTTACCCTGTTaGCAAAATGCAAGTGCTCAC +
Preference number: 2 (lower is better)
Translates to: YLYTSSPMLIKQQQHALGNLLPC*QNASAH
Trigger: GTGAGCACTTGCATTTTGGCAACAGGGTAACAAGTT...TCCCAGAGCGTGCTGCTGCTGTTTTATTAACATAGGGGAAGATGTATATAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR-3UTR CCA 90 bp TATTTATATACATCTTCCCCTATGTTAATAAAACAGCAGCAGCACGCTCTGGGATACCACACACAAAGATaGTCCTTCCACAACTCTGAA +
Preference number: 2 (lower is better)
Translates to: YLYTSSPMLIKQQQHALGYHTQR*SFHNSE
Trigger: TTCAGAGTTGTGGAAGGACCATCTTTGTGTGTGGTA...TCCCAGAGCGTGCTGCTGCTGTTTTATTAACATAGGGGAAGATGTATATAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR-3UTR TCA 90 bp TATTTATATACATCTTCCCCTATGTTAATAAAACAGCAGCAGCACGCTCTGGGACATCCCATTTTGGTATaGAGATCCTCAAGGAAAACT +
Preference number: 2 (lower is better)
Translates to: YLYTSSPMLIKQQQHALGHPILV*RSSRKT
Trigger: AGTTTTCCTTGAGGATCTTCATACCAAAATGGGATG...TCCCAGAGCGTGCTGCTGCTGTTTTATTAACATAGGGGAAGATGTATATAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR TCA 72 bp TCAGGACAGGGACCATGCCTGCTTCCGGATCCCCGATaGCCTACTAGGGTTCATGCTGAGCGGGTGCCCATT +
Preference number: 3 (lower is better)
Translates to: SGQGPCLLPDPR*PTRVHAERVPI
Trigger: AATGGGCACCCGCTCAGCATGAACCCTAGTAGGTCATCGGGGATCCGGAAGCAGGCATGGTCCCTGTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR-3UTR CAA 90 bp CTTCCTTCTTTTCTTTCGGTGGAACGGAACGACCTCTGCCAGCTCCACACCCCAGCATCCAAGCAGCGTTaGCTCCAGCACTTCTGGGAA +
Preference number: 3 (lower is better)
Translates to: LPSFLSVERNDLCQLHTPASKQR*LQHFWE
Trigger: TTCCCAGAAGTGCTGGAGCAAACGCTGCTTGGATGC...TGGGGTGTGGAGCTGGCAGAGGTCGTTCCGTTCCACCGAAAGAAAAGAAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR-3UTR CAA 90 bp GGTTTTCAGGACAGGGACCATGCCTGCTTCCGGATCCCCGATGACCTACTAGGGTGGGCCTTGCTTGGATaGTCCCTTTCCCAAAATCTC +
Preference number: 3 (lower is better)
Translates to: GFQDRDHACFRIPDDLLGWALLG*SLSQNL
Trigger: GAGATTTTGGGAAAGGGACAATCCAAGCAAGGCCCA...CCCTAGTAGGTCATCGGGGATCCGGAAGCAGGCATGGTCCCTGTCCTGAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR TCA 72 bp ATGAAGGTGGGACATAAAAGCCAGTGCAGGAGCTGGTaGTGGTGTGCCCTGGCTCTCTGCAGTTACACCTGC +
Preference number: 3 (lower is better)
Translates to: MKVGHKSQCRSW*WCALALCSYTC
Trigger: GCAGGTGTAACTGCAGAGAGCCAGGGCACACCATCACCAGCTCCTGCACTGGCTTTTATGTCCCACCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR TCA 72 bp CACAGCCTATTAATCAAGGTTGGCAGGGCTGGGGAGTaGGGTCGGCCTAAGGAAAAACGACAACAACGGGAC +
Preference number: 3 (lower is better)
Translates to: HSLLIKVGRAGE*GRPKEKRQQRD
Trigger: GTCCCGTTGTTGTCGTTTTTCCTTAGGCCGACCTCACTCCCCAGCCCTGCCAACCTTGATTAATAGGCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR GCA 72 bp GGGTTCATGCTGAGCGGGTGCCCATTCTTCAGAACATaGTGTGGGCCTTGCTTGGATTGTCCCTTTCCCAAA +
Preference number: 3 (lower is better)
Translates to: GFMLSGCPFFRT*CGPCLDCPFPK
Trigger: TTTGGGAAAGGGACAATCCAAGCAAGGCCCACAGCATGTTCTGAAGAATGGGCACCCGCTCAGCATGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR CCA 72 bp ATAAAAGCCAGTGCAGGAGCTGGTGATGGTGTGCCCTaGCTCTCTGCAGTTACACCTGCATCCTCCATCAGT +
Preference number: 3 (lower is better)
Translates to: IKASAGAGDGVP*LSAVTPASSIS
Trigger: ACTGATGGAGGATGCAGGTGTAACTGCAGAGAGCCAGGGCACACCATCACCAGCTCCTGCACTGGCTTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR-3UTR CAA 90 bp AGACAACCAAACGGCTTGTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATTGCATCCTCCATCAGTaGCCATCTATCTCCCACTGT +
Preference number: 3 (lower is better)
Translates to: RQPNGLFSRGDMTKATGHCILHQ*PSISHC
Trigger: ACAGTGGGAGATAGATGGCAACTGATGGAGGATGCA...ATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAACAAGCCGTTTGGTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR TCA 72 bp CACGCGCGCACGCACTCACGCACACAAGCTCTGTCTTaGAAACAAAGGGTATGCAGTAAGATAGACGAGGCT +
Preference number: 3 (lower is better)
Translates to: HARTHSRTQALS*KQRVCSKIDEA
Trigger: AGCCTCGTCTATCTTACTGCATACCCTTTGTTTTCAAGACAGAGCTTGTGTGCGTGAGTGCGTGCGCGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR TCA 72 bp ACAGACAACCAAACGGCTTGTTCTCCCGTGGGGACATaGCCAAAGCCACAGGGCATCTATTCCTCCAGTTAC +
Preference number: 3 (lower is better)
Translates to: TDNQTACSPVGT*PKPQGIYSSSY
Trigger: GTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAACAAGCCGTTTGGTTGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR CCA 72 bp CTTTCTTTCCTTCCTTCCTTCCTTCTTTTCTTTCGGTaGAACGGAACGACCTCTGCCAGCTCCACACCCCAC +
Preference number: 3 (lower is better)
Translates to: LSFLPSFLLFFR*NGTTSASSTPH
Trigger: GTGGGGTGTGGAGCTGGCAGAGGTCGTTCCGTTCCACCGAAAGAAAAGAAGGAAGGAAGGAAGGAAAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR CCA 72 bp CATGCTGAGCGGGTGCCCATTCTTCAGAACATGCTGTaGGCCTTGCTTGGATTGTCCCTTTCCCAAAATCTC +
Preference number: 3 (lower is better)
Translates to: HAERVPILQNML*ALLGLSLSQNL
Trigger: GAGATTTTGGGAAAGGGACAATCCAAGCAAGGCCCACAGCATGTTCTGAAGAATGGGCACCCGCTCAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR-3UTR CAA 90 bp TATTTATATACATCTTCCCCTATGTTAATAAAACAGCAGCAGCACGCTCTGGGAGGTACACAGGCGCTCTaGCGCGCACGCGCGCACGCA +
Preference number: 3 (lower is better)
Translates to: YLYTSSPMLIKQQQHALGGTQAL*RARAHA
Trigger: TGCGTGCGCGCGTGCGCGCAAGAGCGCCTGTGTACC...TCCCAGAGCGTGCTGCTGCTGTTTTATTAACATAGGGGAAGATGTATATAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR-3UTR CAA 90 bp ATCACACACACCCTCCCTCAGGTCTACACAGGTCAGGCAGGGGTTACAATCAGTCAGCAGGTAAAGTGCTaGCTGTGTAGCCCAACTATT +
Preference number: 3 (lower is better)
Translates to: ITHTLPQVYTGQAGVTISQQVKC*LCSPTI
Trigger: AATAGTTGGGCTACACAGCAAGCACTTTACCTGCTG...ACTGATTGTAACCCCTGCCTGACCTGTGTAGACCTGAGGGAGGGTGTGTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR TCA 72 bp GCCACCTCTACCCTCCTGGCTGAATGGCTACTTTATTaGTGGTGTGTGCTTACAGAAAGACGGGAGCACACA +
Preference number: 3 (lower is better)
Translates to: ATSTLLAEWLLY*WCVLTERREHT
Trigger: TGTGTGCTCCCGTCTTTCTGTAAGCACACACCATCAATAAAGTAGCCATTCAGCCAGGAGGGTAGAGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR TCA 72 bp GGCCTTGCTTGGATTGTCCCTTTCCCAAAATCTCTTTaGTCAGCCAGCTTGGTGGCTCAGCAGGTAAAGTGC +
Preference number: 3 (lower is better)
Translates to: GLAWIVPFPKSL*SASLVAQQVKC
Trigger: GCACTTTACCTGCTGAGCCACCAAGCTGGCTGATCAAAGAGATTTTGGGAAAGGGACAATCCAAGCAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR GCA 72 bp TTAGAATCAACAGAAGTGTATTGTCATTCGAGGGCCTaGCCACAGACTGCGCATCCAAGCAGCGTTTGCTCC +
Preference number: 3 (lower is better)
Translates to: LESTEVYCHSRA*PQTAHPSSVCS
Trigger: GGAGCAAACGCTGCTTGGATGCGCAGTCTGTGGGCAGGCCCTCGAATGACAATACACTTCTGTTGATTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR-3UTR CAA 90 bp CTTCCTTCTTTTCTTTCGGTGGAACGGAACGACCTCTGCCAGCTCCACACCCCAAAACTTGTTACCCTGTaGCCAAAATGCAAGTGCTCA +
Preference number: 3 (lower is better)
Translates to: LPSFLSVERNDLCQLHTPKLVTL*PKCKCS
Trigger: TGAGCACTTGCATTTTGGCAACAGGGTAACAAGTTT...TGGGGTGTGGAGCTGGCAGAGGTCGTTCCGTTCCACCGAAAGAAAAGAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR-3UTR CAA 90 bp CTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTATTCCTCCAGTTACCGGCATTTATCAGATAGATTaGGTATGGATCCACATGTGG +
Preference number: 3 (lower is better)
Translates to: LPWGHDQSHRASIPPVTGIYQID*VWIHMW
Trigger: CCACATGTGGATCCATACCAAATCTATCTGATAAAT...GCCGGTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR TCA 72 bp ATAATAACCAAATGCAAACTGAGGAGGAGGGGCGAGTaGCGACAGAACAGCACATACAGGTACACAGGCGCT +
Preference number: 3 (lower is better)
Translates to: IITKCKLRRRGE*RQNSTYRYTGA
Trigger: AGCGCCTGTGTACCTGTATGTGCTGTTCTGTCGTCACTCGCCCCTCCTCCTCAGTTTGCATTTGGTTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR GCA 72 bp CCCTCCTGGCTGAATGGCTACTTTATTGATGGTGTGTaGTTACAGAAAGACGGGAGCACACACACGATACTG +
Preference number: 3 (lower is better)
Translates to: PSWLNGYFIDGV*LQKDGSTHTIL
Trigger: CAGTATCGTGTGTGTGCTCCCGTCTTTCTGTAAGCACACACCATCAATAAAGTAGCCATTCAGCCAGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR GCA 72 bp AGCGGGTGCCCATTCTTCAGAACATGCTGTGGGCCTTaGTTGGATTGTCCCTTTCCCAAAATCTCTTTGATC +
Preference number: 3 (lower is better)
Translates to: SGCPFFRTCCGP*LDCPFPKISLI
Trigger: GATCAAAGAGATTTTGGGAAAGGGACAATCCAAGCAAGGCCCACAGCATGTTCTGAAGAATGGGCACCCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR-3UTR CAA 90 bp GTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTATTCCTCCAGTTACCATCCTCAAGGAAAACTaGTTACCCTGTTGCCAAAAT +
Preference number: 3 (lower is better)
Translates to: VLPWGHDQSHRASIPPVTILKEN*LPCCQN
Trigger: ATTTTGGCAACAGGGTAACAAGTTTTCCTTGAGGAT...GGTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR TCA 72 bp AGGGAGAGACTAAGGAAGGAGCTCCTGGCAGCTTGCTaGATCAAAGATGCTGAGAACATTATCTGTCCACAG +
Preference number: 3 (lower is better)
Translates to: RERLRKELLAAC*IKDAENIICPQ
Trigger: CTGTGGACAGATAATGTTCTCAGCATCTTTGATTCAGCAAGCTGCCAGGAGCTCCTTCCTTAGTCTCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR TCA 72 bp CAGCAGGTAAAGTGCTTGCTGTGTAGCCCAACTATTTaGGATCAATGGGTGGAGCACATACAGAAGTGGAGA +
Preference number: 3 (lower is better)
Translates to: QQVKCLLCSPTI*DQWVEHIQKWR
Trigger: TCTCCACTTCTGTATGTGCTCCACCCATTGATCTCAAATAGTTGGGCTACACAGCAAGCACTTTACCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR-3UTR CAA 90 bp AGCACAGACAACTTACCACTGGCTATATCACTGAAGAAAATGTCTCCCCCATTACCACACAGCTGTCCTTaGACTTCCAAATACATGCTG +
Preference number: 3 (lower is better)
Translates to: STDNLPLAISLKKMSPPLPHSCP*TSKYML
Trigger: CAGCATGTATTTGGAAGTCAAAGGACAGCTGTGTGG...TAATGGGGGAGACATTTTCTTCAGTGATATAGCCAGTGGTAAGTTGTCTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR TCA 72 bp AGGATCTGGGATGGAGAACATGCACCTAGGGAGAGTTaGGAAAGATGCTCACACAAGAGTGATAATAACCAA +
Preference number: 3 (lower is better)
Translates to: RIWDGEHAPRES*ERCSHKSDNNQ
Trigger: TTGGTTATTATCACTCTTGTGTGAGCATCTTTCTCAACTCTCCCTAGGTGCATGTTCTCCATCCCAGATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR TCA 72 bp AATACCTACCGGTCCTTCTGTTATGGATGCAAGGCTTaGAAACAAGTTTACCACACACAAAGATGGTCCTTC +
Preference number: 3 (lower is better)
Translates to: NTYRSFCYGCKA*KQVYHTQRWSF
Trigger: GAAGGACCATCTTTGTGTGTGGTAAACTTGTTTTCAAGCCTTGCATCCATAACAGAAGGACCGGTAGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR GCA 72 bp CAAGGAAAACTTGTTACCCTGTTGCCAAAATGCAAGTaGTCACAGCCTTGGATTACATACAGAATACTGGCA +
Preference number: 3 (lower is better)
Translates to: QGKLVTLLPKCK*SQPWITYRILA
Trigger: TGCCAGTATTCTGTATGTAATCCAAGGCTGTGAGCACTTGCATTTTGGCAACAGGGTAACAAGTTTTCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR GCA 72 bp CTTCCTTTTCCAACAGTCCACTTCAAATGTCAGTGTTaGTTACAGAGCACAGACAACTTACCACTGGCTATA +
Preference number: 3 (lower is better)
Translates to: LPFPTVHFKCQC*LQSTDNLPLAI
Trigger: TATAGCCAGTGGTAAGTTGTCTGTGCTCTGTAAGCAACACTGACATTTGAAGTGGACTGTTGGAAAAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR GCA 72 bp GATCCTCAAGGAAAACTTGTTACCCTGTTGCCAAAATaGAAGTGCTCACAGCCTTGGATTACATACAGAATA +
Preference number: 3 (lower is better)
Translates to: DPQGKLVTLLPK*KCSQPWITYRI
Trigger: TATTCTGTATGTAATCCAAGGCTGTGAGCACTTGCATTTTGGCAACAGGGTAACAAGTTTTCCTTGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR CCA 72 bp TATACAACTGAAGACACAGTCATCATGACTTCTACCTaGATTAATACCTACCGGTCCTTCTGTTATGGATGC +
Preference number: 3 (lower is better)
Translates to: YTTEDTVIMTST*INTYRSFCYGC
Trigger: GCATCCATAACAGAAGGACCGGTAGGTATTAATCCAGGTAGAAGTCATGATGACTGTGTCTTCAGTTGTATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR-3UTR CAA 90 bp GCTGGCATGAAGAATGCAGAGAGCTGGTTTAAACTGGATTATTTTAAGTTTGTACACACAAGCTCTGTCTaGAAAACAAAGGGTATGCAG +
Preference number: 3 (lower is better)
Translates to: AGMKNAESWFKLDYFKFVHTSSV*KTKGMQ
Trigger: CTGCATACCCTTTGTTTTCAAGACAGAGCTTGTGTG...TACAAACTTAAAATAATCCAGTTTAAACCAGCTCTCTGCATTCTTCATGCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR-3UTR CAA 90 bp AAAAGCCATTTTACTGGTTTGGCATGCGGTATGGAAATTCTAAGAGAGAAAGTCCAAGTGCTCACAGCCTaGGATTACATACAGAATACT +
Preference number: 3 (lower is better)
Translates to: KSHFTGLACGMEILREKVQVLTA*DYIQNT
Trigger: AGTATTCTGTATGTAATCCAAGGCTGTGAGCACTTG...GACTTTCTCTCTTAGAATTTCCATACCGCATGCCAAACCAGTAAAATGGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR TCA 72 bp AAAGTGGTGTGTGGCTCTAATAATTATTCAGGGTTGTaGAAGTCTCTGACTGAACTTGACCACATGCAACAT +
Preference number: 3 (lower is better)
Translates to: KVVCGSNNYSGL*KSLTELDHMQH
Trigger: ATGTTGCATGTGGTCAAGTTCAGTCAGAGACTTTCACAACCCTGAATAATTATTAGAGCCACACACCACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR TCA 72 bp AACTTGACCACATGCAACATTTTAGAACGTCAACACTaGAGAAGTGAACTCCTCAGTAAATGGAAGGAACTA +
Preference number: 3 (lower is better)
Translates to: NLTTCNILERQH*RSELLSKWKEL
Trigger: TAGTTCCTTCCATTTACTGAGGAGTTCACTTCTTCAGTGTTGACGTTCTAAAATGTTGCATGTGGTCAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
3UTR GCA 72 bp TCCCCACAACAAAGCCCACAATTTAAACCTCATACATaGAATTGTTTCCGTTATTGCAAGAAAGATAATGCC +
Preference number: 3 (lower is better)
Translates to: SPQQSPQFKPHT*NCFRYCKKDNA
Trigger: GGCATTATCTTTCTTGCAATAACGGAAACAATTGCATGTATGAGGTTTAAATTGTGGGCTTTGTTGTGGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR CCA 72 bp GACCATGCGCTTTTTCTTTTAATGCAGGAGATAAAGTaGTGTGTGGCTCTAATAATTATTCAGGGTTGTGAA +
Preference number: 3 (lower is better)
Translates to: DHALFLLMQEIK*CVALIIIQGCE
Trigger: TTCACAACCCTGAATAATTATTAGAGCCACACACCACTTTATCTCCTGCATTAAAAGAAAAAGCGCATGGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
CDS-3UTR GCA 90 bp CTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTATTCCTCCAGTTACCGGCACACAAGGCTGCTGTTaGTGCCGCTACTGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: LPWGHDQSHRASIPPVTGTQGCC*CRYCFR
Trigger: ACGGAAGCAGTAGCGGCAGCAACAGCAGCCTTGTGT...GCCGGTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp CAAACTGAGGAGGAGGGGCGAGTGACGACAGAACAGCACATACAGGTACACAGGTACAGCAGGAAGGCTTaGGGTGCGGGACACAGGCGA +
Preference number: 4 (lower is better)
Translates to: QTEEEGRVTTEQHIQVHRYSRKA*GAGHRR
Trigger: TCGCCTGTGTCCCGCACCCCAAGCCTTCCTGCTGTA...CCTGTGTACCTGTATGTGCTGTTCTGTCGTCACTCGCCCCTCCTCCTCAGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp CTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTATTCCTCCAGTTACCGGCTACTGCTTCCGTTGGTaGCTGGCAGAGATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LPWGHDQSHRASIPPVTGYCFRW*LAEMCS
Trigger: GGAGCACATCTCTGCCAGCCACCAACGGAAGCAGTA...GCCGGTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp CTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTATTCCTCCAGTTACCGGCGCCACACCATGGCCATaGCTCTCTCTCAGACTGTTG +
Preference number: 4 (lower is better)
Translates to: LPWGHDQSHRASIPPVTGATPWP*LSLRLL
Trigger: CAACAGTCTGAGAGAGAGCCATGGCCATGGTGTGGC...GCCGGTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp CCTTCTTTTCTTTCGGTGGAACGGAACGACCTCTGCCAGCTCCACACCCCACGGGGTGGCCATCATAAGTaGGCTGTGGAATGGTGGATG +
Preference number: 4 (lower is better)
Translates to: PSFLSVERNDLCQLHTPRGGHHK*AVEWWM
Trigger: CATCCACCATTCCACAGCTCACTTATGATGGCCACC...CCGTGGGGTGTGGAGCTGGCAGAGGTCGTTCCGTTCCACCGAAAGAAAAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR GCA 90 bp AGACAACCAAACGGCTTGTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATTGTCATTCGAGGGCCTaGCCACAGACTGCGCATCCA +
Preference number: 4 (lower is better)
Translates to: RQPNGLFSRGDMTKATGHCHSRA*PQTAHP
Trigger: TGGATGCGCAGTCTGTGGGCAGGCCCTCGAATGACA...ATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAACAAGCCGTTTGGTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215501.2
CDS-3UTR TCA 90 bp GGTTTTCAGGACAGGGACCATGCCTGCTTCCGGATCCCCGATGACCTACTAGGGATTGGACCTGCACTGTaGAGTCACATTTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GFQDRDHACFRIPDDLLGIGPAL*SHIWSQ
Trigger: CTGGGACCAAATGTGACTTCACAGTGCAGGTCCAAT...CCCTAGTAGGTCATCGGGGATCCGGAAGCAGGCATGGTCCCTGTCCTGAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CCA 90 bp CTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTATTCCTCCAGTTACCGGCGTTTCCCGAAAGCGCTaGCTGTTGTCTGAAGCTAGA +
Preference number: 4 (lower is better)
Translates to: LPWGHDQSHRASIPPVTGVSRKR*LLSEAR
Trigger: TCTAGCTTCAGACAACAGCCAGCGCTTTCGGGAAAC...GCCGGTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp AGACAACCAAACGGCTTGTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATAAGGACAGGTCCTCTTaGCAGGGGGTTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RQPNGLFSRGDMTKATGHKDRSS*QGVLPP
Trigger: AGGAGGAAGAACCCCCTGCCAAGAGGACCTGTCCTT...ATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAACAAGCCGTTTGGTTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp CCATCAGTTGCCATCTATCTCCCACTGTCAGAGCATGCTTTCTTCTCTGCGGACGAGTGCAGGAGGTCCTaGTCATCTGAGACCGCCGCT +
Preference number: 4 (lower is better)
Translates to: PSVAIYLPLSEHAFFSADECRRS*SSETAA
Trigger: AGCGGCGGTCTCAGATGACCAGGACCTCCTGCACTC...GTCCGCAGAGAAGAAAGCATGCTCTGACAGTGGGAGATAGATGGCAACTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR GCA 90 bp GTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTATTCCTCCAGTTACCGAGCTGCTGATCTGCTaGACCTGTTGTGGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: VLPWGHDQSHRASIPPVTELLIC*TCCGVK
Trigger: CTTGACACCACAACAGGTGCAGCAGATCAGCAGCTC...GGTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR GCA 90 bp CTTCCTTCTTTTCTTTCGGTGGAACGGAACGACCTCTGCCAGCTCCACACCCCAATGGAGCTGCTGATCTaGTGCACCTGTTGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LPSFLSVERNDLCQLHTPMELLI*CTCCGV
Trigger: GACACCACAACAGGTGCAGCAGATCAGCAGCTCCAT...TGGGGTGTGGAGCTGGCAGAGGTCGTTCCGTTCCACCGAAAGAAAAGAAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR GCA 90 bp CAATGGGTGGAGCACATACAGAAGTGGAGAGGGCTGACTCCACACAGCTGTCCTATGGAGCTGCTGATCTaGTGCACCTGTTGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: QWVEHIQKWRGLTPHSCPMELLI*CTCCGV
Trigger: GACACCACAACAGGTGCAGCAGATCAGCAGCTCCAT...AGGACAGCTGTGTGGAGTCAGCCCTCTCCACTTCTGTATGTGCTCCACCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR GCA 90 bp AGACAACCAAACGGCTTGTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATAAAAACCGGGAGGAGTaGAGGAGGTCCTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: RQPNGLFSRGDMTKATGHKNREE*RRSWSS
Trigger: AGATGACCAGGACCTCCTGCACTCCTCCCGGTTTTT...ATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAACAAGCCGTTTGGTTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR GCA 90 bp CCTTCTTTTCTTTCGGTGGAACGGAACGACCTCTGCCAGCTCCACACCCCACGGTGGTCGAGAAACATCTaGGAGGAGGTATACGGGAAA +
Preference number: 4 (lower is better)
Translates to: PSFLSVERNDLCQLHTPRWSRNI*EEVYGK
Trigger: TTTCCCGTATACCTCCTCGCAGATGTTTCTCGACCA...CCGTGGGGTGTGGAGCTGGCAGAGGTCGTTCCGTTCCACCGAAAGAAAAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR GCA 90 bp CCCTCCTGGCTGAATGGCTACTTTATTGATGGTGTGTGCTTACAGAAAGACGGGACGCTGTGTCTGCGCTaGTCCTGCTGGCCACACCAT +
Preference number: 4 (lower is better)
Translates to: PSWLNGYFIDGVCLQKDGTLCLR*SCWPHH
Trigger: ATGGTGTGGCCAGCAGGAGCAGCGCAGACACAGCGT...CCCGTCTTTCTGTAAGCACACACCATCAATAAAGTAGCCATTCAGCCAGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp GGAGCACATACAGAAGTGGAGAGGGCTGACTCCACACAGCTGTCCTTTGACTTCAAGGACAGGTCCTCTTaGCAGGGGGTTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GAHTEVERADSTQLSFDFKDRSS*QGVLPP
Trigger: AGGAGGAAGAACCCCCTGCCAAGAGGACCTGTCCTT...GAAGTCAAAGGACAGCTGTGTGGAGTCAGCCCTCTCCACTTCTGTATGTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CCA 90 bp CCCCTAGCTGGTCTCCTTCCTTTTCCAACAGTCCACTTCAAATGTCAGTGTTGCTACAGCAGGAAGGCTTaGGGTGCGGGACACAGGCGA +
Preference number: 4 (lower is better)
Translates to: PLAGLLPFPTVHFKCQCCYSRKA*GAGHRR
Trigger: TCGCCTGTGTCCCGCACCCCAAGCCTTCCTGCTGTA...GCAACACTGACATTTGAAGTGGACTGTTGGAAAAGGAAGGAGACCAGCTAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp GTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTATTCCTCCAGTTACCCGGAGGCATAGGACTTaGATGTACGTTGGGGATAGA +
Preference number: 4 (lower is better)
Translates to: VLPWGHDQSHRASIPPVTRRHRT*MYVGDR
Trigger: TCTATCCCCAACGTACATTCAAGTCCTATGCCTCCG...GGTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR GCA 90 bp AAAAGACAAATTCATCACACACACCCTCCCTCAGGTCTACACAGGTCAGGCAGGGTGGGAGCAGGTAAGTaGCCGACAGGGGATTGTCAG +
Preference number: 4 (lower is better)
Translates to: KRQIHHTHPPSGLHRSGRVGAGK*PTGDCQ
Trigger: CTGACAATCCCCTGTCGGGCACTTACCTGCTCCCAC...CCTGCCTGACCTGTGTAGACCTGAGGGAGGGTGTGTGTGATGAATTTGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CCA 90 bp GTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTATTCCTCCAGTTACCCTGTGGAATGGTGGATaGAGAAAGAGTCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: VLPWGHDQSHRASIPPVTLWNGG*RKSRRH
Trigger: ATGCCTCCGACTCTTTCTCCATCCACCATTCCACAG...GGTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp CTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTATTCCTCCAGTTACCGGCTATTTGGTACTGTCGTaGACAATCGGACAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LPWGHDQSHRASIPPVTGYLVLS*TIGQVR
Trigger: CCTCACTTGTCCGATTGTCCACGACAGTACCAAATA...GCCGGTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp CCTAGCTGGTCTCCTTCCTTTTCCAACAGTCCACTTCAAATGTCAGTGTTGCTTGACTGGGTGCAGCGCTaGCGTGAGATGTGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: PSWSPSFSNSPLQMSVLLDWVQR*REMWEF
Trigger: GAACTCCCACATCTCACGTCAGCGCTGCACCCAGTC...AAGCAACACTGACATTTGAAGTGGACTGTTGGAAAAGGAAGGAGACCAGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp CTACTAGCCACATCTTGTTTCCTGGAAGGTTTTCAGGACAGGGACCATGCCTGCTATCCATGGAGCTGCTaGTCTGCTGCACCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: LLATSCFLEGFQDRDHACYPWSC*SAAPVV
Trigger: CACAACAGGTGCAGCAGATCAGCAGCTCCATGGATA...GCAGGCATGGTCCCTGTCCTGAAAACCTTCCAGGAAACAAGATGTGGCTAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR GCA 90 bp GGTTTTCAGGACAGGGACCATGCCTGCTTCCGGATCCCCGATGACCTACTAGGGGGTAACCTGGAAGGCTaGAAGGTTTTGTATTCACTT +
Preference number: 4 (lower is better)
Translates to: GFQDRDHACFRIPDDLLGGNLEG*KVLYSL
Trigger: AAGTGAATACAAAACCTTGCAGCCTTCCAGGTTACC...CCCTAGTAGGTCATCGGGGATCCGGAAGCAGGCATGGTCCCTGTCCTGAAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp CCATCAGTTGCCATCTATCTCCCACTGTCAGAGCATGCTTTCTTCTCTGCGGACATTGGACCTGCACTGTaGAGTCACATTTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PSVAIYLPLSEHAFFSADIGPAL*SHIWSQ
Trigger: CTGGGACCAAATGTGACTTCACAGTGCAGGTCCAAT...GTCCGCAGAGAAGAAAGCATGCTCTGACAGTGGGAGATAGATGGCAACTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp CAAACTGAGGAGGAGGGGCGAGTGACGACAGAACAGCACATACAGGTACACAGGGGACAATCGGACAAGTaGGGTGATATTAATTGGTCG +
Preference number: 4 (lower is better)
Translates to: QTEEEGRVTTEQHIQVHRGQSDK*GDINWS
Trigger: CGACCAATTAATATCACCTCACTTGTCCGATTGTCC...CCTGTGTACCTGTATGTGCTGTTCTGTCGTCACTCGCCCCTCCTCCTCAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp AGACAACCAAACGGCTTGTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATTTTGCTCGTAACCTCTaGAGAAGAACTGTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: RQPNGLFSRGDMTKATGHFARNL*RRTVED
Trigger: GTCCTCAACAGTTCTTCTTCAGAGGTTACGAGCAAA...ATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAACAAGCCGTTTGGTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp ATCACACACACCCTCCCTCAGGTCTACACAGGTCAGGCAGGGGTTACAATCAGTAGGTGGAAGGTAACCTaGAAGGCTGCAAGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: ITHTLPQVYTGQAGVTISRWKVT*KAARFC
Trigger: ACAAAACCTTGCAGCCTTCCAGGTTACCTTCCACCT...ACTGATTGTAACCCCTGCCTGACCTGTGTAGACCTGAGGGAGGGTGTGTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CCA 90 bp CCTTCTTTTCTTTCGGTGGAACGGAACGACCTCTGCCAGCTCCACACCCCACGGAACAACAATGGTATTTaGTACTGTCGTGGACAATCG +
Preference number: 4 (lower is better)
Translates to: PSFLSVERNDLCQLHTPRNNNGI*YCRGQS
Trigger: CGATTGTCCACGACAGTACCAAATACCATTGTTGTT...CCGTGGGGTGTGGAGCTGGCAGAGGTCGTTCCGTTCCACCGAAAGAAAAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp GGGCCTTGCTTGGATTGTCCCTTTCCCAAAATCTCTTTGATCAGCCAGCTTGGTAGGTTGGGTGGGAAGTaGTCTTCTTGTGGACAACTG +
Preference number: 4 (lower is better)
Translates to: GPCLDCPFPKISLISQLGRLGGK*SSCGQL
Trigger: CAGTTGTCCACAAGAAGATCACTTCCCACCCAACCT...ACCAAGCTGGCTGATCAAAGAGATTTTGGGAAAGGGACAATCCAAGCAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp CCCCTAGCTGGTCTCCTTCCTTTTCCAACAGTCCACTTCAAATGTCAGTGTTGCTTGAACCTCCTTCTTTaGCCTCATTGGAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: PLAGLLPFPTVHFKCQCCLNLLL*PHWSPR
Trigger: TCGTGGGCTCCAATGAGGTCAAAGAAGGAGGTTCAA...GCAACACTGACATTTGAAGTGGACTGTTGGAAAAGGAAGGAGACCAGCTAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp CTTCCTTCTTTTCTTTCGGTGGAACGGAACGACCTCTGCCAGCTCCACACCCCATTTCTTGTTTTTATTTaGGGACTGGTTGTGGGACGC +
Preference number: 4 (lower is better)
Translates to: LPSFLSVERNDLCQLHTPFLVFI*GLVVGR
Trigger: GCGTCCCACAACCAGTCCTCAAATAAAAACAAGAAA...TGGGGTGTGGAGCTGGCAGAGGTCGTTCCGTTCCACCGAAAGAAAAGAAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR GCA 90 bp CTGAAGAAAATGTCTCCCCCATTAACCATTAACTGCCTACAAATCTTAGGCTTCCAGGAAGGCTTGGGGTaGGGGACACAGGCGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LKKMSPPLTINCLQILGFQEGLG*GTQARL
Trigger: AAGCCTCGCCTGTGTCCCGCACCCCAAGCCTTCCTG...GAAGCCTAAGATTTGTAGGCAGTTAATGGTTAATGGGGGAGACATTTTCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CCA 90 bp GAAGTGGAGAGGGCTGACTCCACACAGCTGTCCTTTGACTTCCAAATACATGCTCTGTGGAATGGTGGATaGAGAAAGAGTCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: EVERADSTQLSFDFQIHALWNGG*RKSRRH
Trigger: ATGCCTCCGACTCTTTCTCCATCCACCATTCCACAG...AGCATGTATTTGGAAGTCAAAGGACAGCTGTGTGGAGTCAGCCCTCTCCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CCA 90 bp CTACTAGCCACATCTTGTTTCCTGGAAGGTTTTCAGGACAGGGACCATGCCTGCCTGCTGCACCTGTTGTaGTGTCAAGGCAAATGCAAA +
Preference number: 4 (lower is better)
Translates to: LLATSCFLEGFQDRDHACLLHLL*CQGKCK
Trigger: TTTGCATTTGCCTTGACACCACAACAGGTGCAGCAG...GCAGGCATGGTCCCTGTCCTGAAAACCTTCCAGGAAACAAGATGTGGCTAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CCA 90 bp AAACAAGTTTACCACACACAAAGATGGTCCTTCCACAACTCTGAAAACATGAAGCTGCGCTGCTCCTGCTaGCCACACCATGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: KQVYHTQRWSFHNSENMKLRCSC*PHHGHG
Trigger: GCCATGGCCATGGTGTGGCCAGCAGGAGCAGCGCAG...CTTCATGTTTTCAGAGTTGTGGAAGGACCATCTTTGTGTGTGGTAAACTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR CAA 72 bp GGGTGCCCATTCTTCAGAACATGCTGTGGGCCTTGCTaGGATTGTCCCTTTCCCAAAATCTCTTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: GCPFFRTCCGPC*DCPFPKISLIS
Trigger: GCTGATCAAAGAGATTTTGGGAAAGGGACAATCCAAGCAAGGCCCACAGCATGTTCTGAAGAATGGGCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR CAA 72 bp GAGCGGGTGCCCATTCTTCAGAACATGCTGTGGGCCTaGCTTGGATTGTCCCTTTCCCAAAATCTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: ERVPILQNMLWA*LGLSLSQNLFD
Trigger: ATCAAAGAGATTTTGGGAAAGGGACAATCCAAGCAAGGCCCACAGCATGTTCTGAAGAATGGGCACCCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR CAA 72 bp TCAGGCAGGGGTTACAATCAGTCTACTAGCCACATCTaGTTTCCTGGAAGGTTTTCAGGACAGGGACCATGC +
Preference number: 4 (lower is better)
Translates to: SGRGYNQSTSHI*FPGRFSGQGPC
Trigger: GCATGGTCCCTGTCCTGAAAACCTTCCAGGAAACAAGATGTGGCTAGTAGACTGATTGTAACCCCTGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp CCTAGCTGGTCTCCTTCCTTTTCCAACAGTCCACTTCAAATGTCAGTGTTGCTTGGTGGCCATCATAAGTaGGCTGTGGAATGGTGGATG +
Preference number: 4 (lower is better)
Translates to: PSWSPSFSNSPLQMSVLLGGHHK*AVEWWM
Trigger: CATCCACCATTCCACAGCTCACTTATGATGGCCACC...AAGCAACACTGACATTTGAAGTGGACTGTTGGAAAAGGAAGGAGACCAGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp GAAGTGGAGAGGGCTGACTCCACACAGCTGTCCTTTGACTTCCAAATACATGCTCATTGTAGGAGGCAGTaGCTTCTTGAACCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EVERADSTQLSFDFQIHAHCRRQ*LLEPPS
Trigger: AGAAGGAGGTTCAAGAAGTCACTGCCTCCTACAATG...AGCATGTATTTGGAAGTCAAAGGACAGCTGTGTGGAGTCAGCCCTCTCCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp TACAATCAGTCTACTAGCCACATCTTGTTTCCTGGAAGGTTTTCAGGACAGGGATTGTGGGACGCTACCTaGTGCTCCAATGTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: YNQSTSHILFPGRFSGQGLWDAT*CSNVEL
Trigger: GAGCTCCACATTGGAGCATCAGGTAGCGTCCCACAA...TCCCTGTCCTGAAAACCTTCCAGGAAACAAGATGTGGCTAGTAGACTGATTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CCA 90 bp ACATGCTGTGGGCCTTGCTTGGATTGTCCCTTTCCCAAAATCTCTTTGATCAGCGTTTCCCGAAAGCGCTaGCTGTTGTCTGAAGCTAGA +
Preference number: 4 (lower is better)
Translates to: TCCGPCLDCPFPKISLISVSRKR*LLSEAR
Trigger: TCTAGCTTCAGACAACAGCCAGCGCTTTCGGGAAAC...GCTGATCAAAGAGATTTTGGGAAAGGGACAATCCAAGCAAGGCCCACAGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CCA 90 bp CAATGGGTGGAGCACATACAGAAGTGGAGAGGGCTGACTCCACACAGCTGTCCTAACAACAATGGTATTTaGTACTGTCGTGGACAATCG +
Preference number: 4 (lower is better)
Translates to: QWVEHIQKWRGLTPHSCPNNNGI*YCRGQS
Trigger: CGATTGTCCACGACAGTACCAAATACCATTGTTGTT...AGGACAGCTGTGTGGAGTCAGCCCTCTCCACTTCTGTATGTGCTCCACCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CCA 90 bp GTAAAACAGAGCATAGAGTTCTCTTCTGCCAAGTCATTTAATCTGGGATGGGGTCGCTACTGCTTCCGTTaGTGGCTGGCAGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: VKQSIEFSSAKSFNLGWGRYCFR*WLAEMC
Trigger: GCACATCTCTGCCAGCCACCAACGGAAGCAGTAGCG...ACCCCATCCCAGATTAAATGACTTGGCAGAAGAGAACTCTATGCTCTGTTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp CCCTCCTGGCTGAATGGCTACTTTATTGATGGTGTGTGCTTACAGAAAGACGGGTCTCTCTCAGACTGTTaGAAGACACAAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PSWLNGYFIDGVCLQKDGSLSDC*KTQGCC
Trigger: ACAGCAGCCTTGTGTCTTCCAACAGTCTGAGAGAGA...CCCGTCTTTCTGTAAGCACACACCATCAATAAAGTAGCCATTCAGCCAGGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR CAA 72 bp TACTGGCAATTCAGACTTAGAATCAACAGAAGTGTATaGTCATTCGAGGGCCTGCCCACAGACTGCGCATCC +
Preference number: 4 (lower is better)
Translates to: YWQFRLRINRSV*SFEGLPTDCAS
Trigger: GGATGCGCAGTCTGTGGGCAGGCCCTCGAATGACAATACACTTCTGTTGATTCTAAGTCTGAATTGCCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp ATAGACGAGGCTCATAACTTAAGGCTGGTAAAATCTACGCACACACAAACAGAAGGTGCAGCGCTGACGTaGGATGTGGGAGTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: IDEAHNLRLVKSTHTQTEGAALT*DVGVPV
Trigger: AACTGGAACTCCCACATCTCACGTCAGCGCTGCACC...TTCTGTTTGTGTGTGCGTAGATTTTACCAGCCTTAAGTTATGAGCCTCGTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp TATTTATATACATCTTCCCCTATGTTAATAAAACAGCAGCAGCACGCTCTGGGAGACTGGGTGCAGCGCTaGCGTGAGATGTGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: YLYTSSPMLIKQQQHALGDWVQR*REMWEF
Trigger: GAACTCCCACATCTCACGTCAGCGCTGCACCCAGTC...TCCCAGAGCGTGCTGCTGCTGTTTTATTAACATAGGGGAAGATGTATATAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp CCCCTAGCTGGTCTCCTTCCTTTTCCAACAGTCCACTTCAAATGTCAGTGTTGCTTTGCTCGTAACCTCTaGAGAAGAACTGTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: PLAGLLPFPTVHFKCQCCFARNL*RRTVED
Trigger: GTCCTCAACAGTTCTTCTTCAGAGGTTACGAGCAAA...GCAACACTGACATTTGAAGTGGACTGTTGGAAAAGGAAGGAGACCAGCTAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR GCA 90 bp ATCACACACACCCTCCCTCAGGTCTACACAGGTCAGGCAGGGGTTACAATCAGTAACCTTAATTGGACCTaGACTGTGAAGTCACATTTG +
Preference number: 4 (lower is better)
Translates to: ITHTLPQVYTGQAGVTISNLNWT*TVKSHL
Trigger: CAAATGTGACTTCACAGTGCAGGTCCAATTAAGGTT...ACTGATTGTAACCCCTGCCTGACCTGTGTAGACCTGAGGGAGGGTGTGTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR GCA 90 bp GCTGGCATGAAGAATGCAGAGAGCTGGTTTAAACTGGATTATTTTAAGTTTGTACAGGAAGGCTTGGGGTaGGGGACACAGGCGAGGCTT +
Preference number: 4 (lower is better)
Translates to: AGMKNAESWFKLDYFKFVQEGLG*GTQARL
Trigger: AAGCCTCGCCTGTGTCCCGCACCCCAAGCCTTCCTG...TACAAACTTAAAATAATCCAGTTTAAACCAGCTCTCTGCATTCTTCATGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR GCA 90 bp AAAAGCCATTTTACTGGTTTGGCATGCGGTATGGAAATTCTAAGAGAGAAAGTCTGTCTGCGCTGCTCCTaGTGGCCACACCATGGCCAT +
Preference number: 4 (lower is better)
Translates to: KSHFTGLACGMEILREKVCLRCS*WPHHGH
Trigger: ATGGCCATGGTGTGGCCAGCAGGAGCAGCGCAGACA...GACTTTCTCTCTTAGAATTTCCATACCGCATGCCAAACCAGTAAAATGGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp CCCTCCTGGCTGAATGGCTACTTTATTGATGGTGTGTGCTTACAGAAAGACGGGGTTCCAGTTCATGTTTaGGTCCCAGAAGAGAAACAG +
Preference number: 4 (lower is better)
Translates to: PSWLNGYFIDGVCLQKDGVPVHV*VPEEKQ
Trigger: CTGTTTCTCTTCTGGGACCCAAACATGAACTGGAAC...CCCGTCTTTCTGTAAGCACACACCATCAATAAAGTAGCCATTCAGCCAGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp AAAAGACAAATTCATCACACACACCCTCCCTCAGGTCTACACAGGTCAGGCAGGTACACAAAGGTTGGGTaGGAAGTGATCTTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: KRQIHHTHPPSGLHRSGRYTKVG*EVIFLW
Trigger: CCACAAGAAGATCACTTCCCACCCAACCTTTGTGTA...CCTGCCTGACCTGTGTAGACCTGAGGGAGGGTGTGTGTGATGAATTTGTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CCA 90 bp AACTATTTGAGATCAATGGGTGGAGCACATACAGAAGTGGAGAGGGCTGACTCCCCTGATGCTCCAATGTaGAGCTCAAGCAACCATCAA +
Preference number: 4 (lower is better)
Translates to: NYLRSMGGAHTEVERADSPDAPM*SSSNHQ
Trigger: TTGATGGTTGCTTGAGCTCCACATTGGAGCATCAGG...GGAGTCAGCCCTCTCCACTTCTGTATGTGCTCCACCCATTGATCTCAAATAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp AACTATTTGAGATCAATGGGTGGAGCACATACAGAAGTGGAGAGGGCTGACTCCGGACAATCGGACAAGTaGGGTGATATTAATTGGTCG +
Preference number: 4 (lower is better)
Translates to: NYLRSMGGAHTEVERADSGQSDK*GDINWS
Trigger: CGACCAATTAATATCACCTCACTTGTCCGATTGTCC...GGAGTCAGCCCTCTCCACTTCTGTATGTGCTCCACCCATTGATCTCAAATAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp CCATCAGTTGCCATCTATCTCCCACTGTCAGAGCATGCTTTCTTCTCTGCGGACCTGAAGAAGAACTGTTaGGGACAACTGTTTTACAAG +
Preference number: 4 (lower is better)
Translates to: PSVAIYLPLSEHAFFSADLKKNC*GQLFYK
Trigger: CTTGTAAAACAGTTGTCCTCAACAGTTCTTCTTCAG...GTCCGCAGAGAAGAAAGCATGCTCTGACAGTGGGAGATAGATGGCAACTGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp TACAATCAGTCTACTAGCCACATCTTGTTTCCTGGAAGGTTTTCAGGACAGGGAGAGGCAGTGACTTCTTaGACCTCCTTCTTTGACCTC +
Preference number: 4 (lower is better)
Translates to: YNQSTSHILFPGRFSGQGEAVTS*TSFFDL
Trigger: GAGGTCAAAGAAGGAGGTTCAAGAAGTCACTGCCTC...TCCCTGTCCTGAAAACCTTCCAGGAAACAAGATGTGGCTAGTAGACTGATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR GCA 90 bp GAAGTGGAGAGGGCTGACTCCACACAGCTGTCCTTTGACTTCCAAATACATGCTTGGTGTCAAGGCAAATaGAAAACAGGTTTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: EVERADSTQLSFDFQIHAWCQGK*KTGFPK
Trigger: TTTCGGGAAACCTGTTTTGCATTTGCCTTGACACCA...AGCATGTATTTGGAAGTCAAAGGACAGCTGTGTGGAGTCAGCCCTCTCCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR GCA 90 bp ATAGACGAGGCTCATAACTTAAGGCTGGTAAAATCTACGCACACACAAACAGAATGGCTGGCAGAGATGTaGTCCCTCCTGCACTTAGCT +
Preference number: 4 (lower is better)
Translates to: IDEAHNLRLVKSTHTQTEWLAEM*SLLHLA
Trigger: AGCTAAGTGCAGGAGGGAGCACATCTCTGCCAGCCA...TTCTGTTTGTGTGTGCGTAGATTTTACCAGCCTTAAGTTATGAGCCTCGTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp TTTTCTAAAAAGACAAATTCATCACACACACCCTCCCTCAGGTCTACACAGGTCCGGAGGCATAGGACTTaGATGTACGTTGGGGATAGA +
Preference number: 4 (lower is better)
Translates to: FSKKTNSSHTPSLRSTQVRRHRT*MYVGDR
Trigger: TCTATCCCCAACGTACATTCAAGTCCTATGCCTCCG...GACCTGTGTAGACCTGAGGGAGGGTGTGTGTGATGAATTTGTCTTTTTAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp TTTTCTAAAAAGACAAATTCATCACACACACCCTCCCTCAGGTCTACACAGGTCCTAGACTGGTGGGCTTaGTCAGTTCATCCAACAGGT +
Preference number: 4 (lower is better)
Translates to: FSKKTNSSHTPSLRSTQVLDWWA*SVHPTG
Trigger: ACCTGTTGGATGAACTGATCAAGCCCACCAGTCTAG...GACCTGTGTAGACCTGAGGGAGGGTGTGTGTGATGAATTTGTCTTTTTAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp TACAATCAGTCTACTAGCCACATCTTGTTTCCTGGAAGGTTTTCAGGACAGGGAGTTGCATCAAAACACTaGAGGTGGGAGCAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: YNQSTSHILFPGRFSGQGVASKH*RWEQVS
Trigger: ACTTACCTGCTCCCACCTTCAGTGTTTTGATGCAAC...TCCCTGTCCTGAAAACCTTCCAGGAAACAAGATGTGGCTAGTAGACTGATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp AAAAGCCATTTTACTGGTTTGGCATGCGGTATGGAAATTCTAAGAGAGAAAGTCTTGTGGGACGCTACCTaGTGCTCCAATGTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: KSHFTGLACGMEILREKVLWDAT*CSNVEL
Trigger: GAGCTCCACATTGGAGCATCAGGTAGCGTCCCACAA...GACTTTCTCTCTTAGAATTTCCATACCGCATGCCAAACCAGTAAAATGGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR GCA 90 bp GCTGGCATGAAGAATGCAGAGAGCTGGTTTAAACTGGATTATTTTAAGTTTGTAGTGGGAGCAGGTAAGTaGCCGACAGGGGATTGTCAG +
Preference number: 4 (lower is better)
Translates to: AGMKNAESWFKLDYFKFVVGAGK*PTGDCQ
Trigger: CTGACAATCCCCTGTCGGGCACTTACCTGCTCCCAC...TACAAACTTAAAATAATCCAGTTTAAACCAGCTCTCTGCATTCTTCATGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR GCA 90 bp ATCACACACACCCTCCCTCAGGTCTACACAGGTCAGGCAGGGGTTACAATCAGTGAGGAAGACTTAAAATaGCTTTATTACTTAGTGGTG +
Preference number: 4 (lower is better)
Translates to: ITHTLPQVYTGQAGVTISEEDLK*LYYLVV
Trigger: CACCACTAAGTAATAAAGGCATTTTAAGTCTTCCTC...ACTGATTGTAACCCCTGCCTGACCTGTGTAGACCTGAGGGAGGGTGTGTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR GCA 90 bp GCTGGCATGAAGAATGCAGAGAGCTGGTTTAAACTGGATTATTTTAAGTTTGTACAAGGCTGCTGTTGCTaGCGCTACTGCTTCCGTTGG +
Preference number: 4 (lower is better)
Translates to: AGMKNAESWFKLDYFKFVQGCCC*RYCFRW
Trigger: CCAACGGAAGCAGTAGCGGCAGCAACAGCAGCCTTG...TACAAACTTAAAATAATCCAGTTTAAACCAGCTCTCTGCATTCTTCATGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp CCCTCCTGGCTGAATGGCTACTTTATTGATGGTGTGTGCTTACAGAAAGACGGGCTTTTACACAAAGGTTaGGTGGGAAGTGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: PSWLNGYFIDGVCLQKDGLLHKG*VGSDLL
Trigger: AAGAAGATCACTTCCCACCCAACCTTTGTGTAAAAG...CCCGTCTTTCTGTAAGCACACACCATCAATAAAGTAGCCATTCAGCCAGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp GAAGTGGAGAGGGCTGACTCCACACAGCTGTCCTTTGACTTCCAAATACATGCTCTTTTACACAAAGGTTaGGTGGGAAGTGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: EVERADSTQLSFDFQIHALLHKG*VGSDLL
Trigger: AAGAAGATCACTTCCCACCCAACCTTTGTGTAAAAG...AGCATGTATTTGGAAGTCAAAGGACAGCTGTGTGGAGTCAGCCCTCTCCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CCA 90 bp CTAGCTGGTCTCCTTCCTTTTCCAACAGTCCACTTCAAATGTCAGTGTTGCTTATCGGCTAGGTCGCTTTaGTTCCACACCGTTTTTAGT +
Preference number: 4 (lower is better)
Translates to: LAGLLPFPTVHFKCQCCLSARSL*FHTVFS
Trigger: ACTAAAAACGGTGTGGAACCAAAGCGACCTAGCCGA...TAAGCAACACTGACATTTGAAGTGGACTGTTGGAAAAGGAAGGAGACCAGCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CCA 90 bp ATAGACGAGGCTCATAACTTAAGGCTGGTAAAATCTACGCACACACAAACAGAATCGCATTTTCCCAAGTaGACACAGCAGCGAAACCCG +
Preference number: 4 (lower is better)
Translates to: IDEAHNLRLVKSTHTQTESHFPK*TQQRNP
Trigger: CGGGTTTCGCTGCTGTGTCCACTTGGGAAAATGCGA...TTCTGTTTGTGTGTGCGTAGATTTTACCAGCCTTAAGTTATGAGCCTCGTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp TTACCACTGGCTATATCACTGAAGAAAATGTCTCCCCCATTAACCATTAACTGCTCGCATTTTCCCAAGTaGACACAGCAGCGAAACCCG +
Preference number: 4 (lower is better)
Translates to: LPLAISLKKMSPPLTINCSHFPK*TQQRNP
Trigger: CGGGTTTCGCTGCTGTGTCCACTTGGGAAAATGCGA...GCAGTTAATGGTTAATGGGGGAGACATTTTCTTCAGTGATATAGCCAGTGGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp GGTCTCCTTCCTTTTCCAACAGTCCACTTCAAATGTCAGTGTTGCTTACAGAGCTTTCTTGTTTTTATTTaGGGACTGGTTGTGGGACGC +
Preference number: 4 (lower is better)
Translates to: GLLPFPTVHFKCQCCLQSFLVFI*GLVVGR
Trigger: GCGTCCCACAACCAGTCCTCAAATAAAAACAAGAAA...GCTCTGTAAGCAACACTGACATTTGAAGTGGACTGTTGGAAAAGGAAGGAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CCA 90 bp GTAAAACAGAGCATAGAGTTCTCTTCTGCCAAGTCATTTAATCTGGGATGGGGTAGGTGGAAGGTAACCTaGAAGGCTGCAAGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: VKQSIEFSSAKSFNLGWGRWKVT*KAARFC
Trigger: ACAAAACCTTGCAGCCTTCCAGGTTACCTTCCACCT...ACCCCATCCCAGATTAAATGACTTGGCAGAAGAGAACTCTATGCTCTGTTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp TGTTACCCTGTTGCCAAAATGCAAGTGCTCACAGCCTTGGATTACATACAGAATTCGGCTAGGTCGCTTTaGTTCCACACCGTTTTTAGT +
Preference number: 4 (lower is better)
Translates to: CYPVAKMQVLTALDYIQNSARSL*FHTVFS
Trigger: ACTAAAAACGGTGTGGAACCAAAGCGACCTAGCCGA...ATTCTGTATGTAATCCAAGGCTGTGAGCACTTGCATTTTGGCAACAGGGTAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp CTACTAGCCACATCTTGTTTCCTGGAAGGTTTTCAGGACAGGGACCATGCCTGCCAAGATATACTGCCATaGAATAGGTTCTTCCAATTT +
Preference number: 4 (lower is better)
Translates to: LLATSCFLEGFQDRDHACQDILP*NRFFQF
Trigger: AAATTGGAAGAACCTATTCCATGGCAGTATATCTTG...GCAGGCATGGTCCCTGTCCTGAAAACCTTCCAGGAAACAAGATGTGGCTAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CCA 90 bp TCTTTCACATCCCATTTTGGTATGAAGATCCTCAAGGAAAACTTGTTACCCTGTCCTCCTGCACTTAGCTaGTCGAGAAACATCTGCGAG +
Preference number: 4 (lower is better)
Translates to: SFTSHFGMKILKENLLPCPPALS*SRNICE
Trigger: CTCGCAGATGTTTCTCGACCAGCTAAGTGCAGGAGG...ACAGGGTAACAAGTTTTCCTTGAGGATCTTCATACCAAAATGGGATGTGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
3UTR CAA 72 bp CCTTCCTTTTCCAACAGTCCACTTCAAATGTCAGTGTaGCTTACAGAGCACAGACAACTTACCACTGGCTAT +
Preference number: 4 (lower is better)
Translates to: PSFSNSPLQMSV*LTEHRQLTTGY
Trigger: ATAGCCAGTGGTAAGTTGTCTGTGCTCTGTAAGCAACACTGACATTTGAAGTGGACTGTTGGAAAAGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp TATTTATATACATCTTCCCCTATGTTAATAAAACAGCAGCAGCACGCTCTGGGACTAGACTGGTGGGCTTaGTCAGTTCATCCAACAGGT +
Preference number: 4 (lower is better)
Translates to: YLYTSSPMLIKQQQHALGLDWWA*SVHPTG
Trigger: ACCTGTTGGATGAACTGATCAAGCCCACCAGTCTAG...TCCCAGAGCGTGCTGCTGCTGTTTTATTAACATAGGGGAAGATGTATATAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp GCTGGCATGAAGAATGCAGAGAGCTGGTTTAAACTGGATTATTTTAAGTTTGTATATCCATGGAGCTGCTaGTCTGCTGCACCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: AGMKNAESWFKLDYFKFVYPWSC*SAAPVV
Trigger: CACAACAGGTGCAGCAGATCAGCAGCTCCATGGATA...TACAAACTTAAAATAATCCAGTTTAAACCAGCTCTCTGCATTCTTCATGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp AAACAAGTTTACCACACACAAAGATGGTCCTTCCACAACTCTGAAAACATGAAGAGGTTGGGTGGGAAGTaGTCTTCTTGTGGACAACTG +
Preference number: 4 (lower is better)
Translates to: KQVYHTQRWSFHNSENMKRLGGK*SSCGQL
Trigger: CAGTTGTCCACAAGAAGATCACTTCCCACCCAACCT...CTTCATGTTTTCAGAGTTGTGGAAGGACCATCTTTGTGTGTGGTAAACTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp TCTTTCACATCCCATTTTGGTATGAAGATCCTCAAGGAAAACTTGTTACCCTGTTTGAACCTCCTTCTTTaGCCTCATTGGAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: SFTSHFGMKILKENLLPCLNLLL*PHWSPR
Trigger: TCGTGGGCTCCAATGAGGTCAAAGAAGGAGGTTCAA...ACAGGGTAACAAGTTTTCCTTGAGGATCTTCATACCAAAATGGGATGTGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp TCTTTCACATCCCATTTTGGTATGAAGATCCTCAAGGAAAACTTGTTACCCTGTGAGGCAGTGACTTCTTaGACCTCCTTCTTTGACCTC +
Preference number: 4 (lower is better)
Translates to: SFTSHFGMKILKENLLPCEAVTS*TSFFDL
Trigger: GAGGTCAAAGAAGGAGGTTCAAGAAGTCACTGCCTC...ACAGGGTAACAAGTTTTCCTTGAGGATCTTCATACCAAAATGGGATGTGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp ATAGACGAGGCTCATAACTTAAGGCTGGTAAAATCTACGCACACACAAACAGAACATTGTAGGAGGCAGTaGCTTCTTGAACCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: IDEAHNLRLVKSTHTQTEHCRRQ*LLEPPS
Trigger: AGAAGGAGGTTCAAGAAGTCACTGCCTCCTACAATG...TTCTGTTTGTGTGTGCGTAGATTTTACCAGCCTTAAGTTATGAGCCTCGTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp CTAGCTGGTCTCCTTCCTTTTCCAACAGTCCACTTCAAATGTCAGTGTTGCTTAATCATAAGTGAGCTGTaGAATGGTGGATGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LAGLLPFPTVHFKCQCCLIISEL*NGGWRK
Trigger: CTTTCTCCATCCACCATTCCACAGCTCACTTATGAT...TAAGCAACACTGACATTTGAAGTGGACTGTTGGAAAAGGAAGGAGACCAGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CCA 90 bp GTAAAACAGAGCATAGAGTTCTCTTCTGCCAAGTCATTTAATCTGGGATGGGGTTACACAAAGGTTGGGTaGGAAGTGATCTTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: VKQSIEFSSAKSFNLGWGYTKVG*EVIFLW
Trigger: CCACAAGAAGATCACTTCCCACCCAACCTTTGTGTA...ACCCCATCCCAGATTAAATGACTTGGCAGAAGAGAACTCTATGCTCTGTTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp TCTTTCACATCCCATTTTGGTATGAAGATCCTCAAGGAAAACTTGTTACCCTGTGTTGCATCAAAACACTaGAGGTGGGAGCAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: SFTSHFGMKILKENLLPCVASKH*RWEQVS
Trigger: ACTTACCTGCTCCCACCTTCAGTGTTTTGATGCAAC...ACAGGGTAACAAGTTTTCCTTGAGGATCTTCATACCAAAATGGGATGTGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR GCA 90 bp TACCCTGTTGCCAAAATGCAAGTGCTCACAGCCTTGGATTACATACAGAATACTGGTAACCTGGAAGGCTaGAAGGTTTTGTATTCACTT +
Preference number: 4 (lower is better)
Translates to: YPVAKMQVLTALDYIQNTGNLEG*KVLYSL
Trigger: AAGTGAATACAAAACCTTGCAGCCTTCCAGGTTACC...AGTATTCTGTATGTAATCCAAGGCTGTGAGCACTTGCATTTTGGCAACAGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp GTAAAACAGAGCATAGAGTTCTCTTCTGCCAAGTCATTTAATCTGGGATGGGGTATCATAAGTGAGCTGTaGAATGGTGGATGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: VKQSIEFSSAKSFNLGWGIISEL*NGGWRK
Trigger: CTTTCTCCATCCACCATTCCACAGCTCACTTATGAT...ACCCCATCCCAGATTAAATGACTTGGCAGAAGAGAACTCTATGCTCTGTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp TTACCACTGGCTATATCACTGAAGAAAATGTCTCCCCCATTAACCATTAACTGCTATTTGGTACTGTCGTaGACAATCGGACAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LPLAISLKKMSPPLTINCYLVLS*TIGQVR
Trigger: CCTCACTTGTCCGATTGTCCACGACAGTACCAAATA...GCAGTTAATGGTTAATGGGGGAGACATTTTCTTCAGTGATATAGCCAGTGGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
3UTR CAA 72 bp TGTTACCCTGTTGCCAAAATGCAAGTGCTCACAGCCTaGGATTACATACAGAATACTGGCAATTCAGACTTA +
Preference number: 4 (lower is better)
Translates to: CYPVAKMQVLTA*DYIQNTGNSDL
Trigger: TAAGTCTGAATTGCCAGTATTCTGTATGTAATCCAAGGCTGTGAGCACTTGCATTTTGGCAACAGGGTAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000215501.2
CDS-3UTR TCA 90 bp TTACAGAGCACAGACAACTTACCACTGGCTATATCACTGAAGAAAATGTCTCCCCTGAAGAAGAACTGTTaGGGACAACTGTTTTACAAG +
Preference number: 4 (lower is better)
Translates to: LQSTDNLPLAISLKKMSPLKKNC*GQLFYK
Trigger: CTTGTAAAACAGTTGTCCTCAACAGTTCTTCTTCAG...GGGAGACATTTTCTTCAGTGATATAGCCAGTGGTAAGTTGTCTGTGCTCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp AGCACAGACAACTTACCACTGGCTATATCACTGAAGAAAATGTCTCCCCCATTAATTAAAGCTCTAGAATaGTCCGGATTCCTTATTCCC +
Preference number: 4 (lower is better)
Translates to: STDNLPLAISLKKMSPPLIKALE*SGFLIP
Trigger: GGGAATAAGGAATCCGGATCATTCTAGAGCTTTAAT...TAATGGGGGAGACATTTTCTTCAGTGATATAGCCAGTGGTAAGTTGTCTGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp TACCCTGTTGCCAAAATGCAAGTGCTCACAGCCTTGGATTACATACAGAATACTCAATGGTTAGGTCAATaGCCTCGACTTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: YPVAKMQVLTALDYIQNTQWLGQ*PRLSCF
Trigger: AAAACAAGAAAGTCGAGGTCATTGACCTAACCATTG...AGTATTCTGTATGTAATCCAAGGCTGTGAGCACTTGCATTTTGGCAACAGGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp TTTTCTAAAAAGACAAATTCATCACACACACCCTCCCTCAGGTCTACACAGGTCCAATGGTTAGGTCAATaGCCTCGACTTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: FSKKTNSSHTPSLRSTQVQWLGQ*PRLSCF
Trigger: AAAACAAGAAAGTCGAGGTCATTGACCTAACCATTG...GACCTGTGTAGACCTGAGGGAGGGTGTGTGTGATGAATTTGTCTTTTTAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR GCA 90 bp TGTTACCCTGTTGCCAAAATGCAAGTGCTCACAGCCTTGGATTACATACAGAATCCAGCCTTTAACAAATaGAGGGCTTTTGTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: CYPVAKMQVLTALDYIQNPAFNK*RAFVRS
Trigger: ACTTCTTACAAAAGCCCTGCATTTGTTAAAGGCTGG...ATTCTGTATGTAATCCAAGGCTGTGAGCACTTGCATTTTGGCAACAGGGTAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp GCTGGCATGAAGAATGCAGAGAGCTGGTTTAAACTGGATTATTTTAAGTTTGTACTGCTGCACCTGTTGTaGTGTCAAGGCAAATGCAAA +
Preference number: 4 (lower is better)
Translates to: AGMKNAESWFKLDYFKFVLLHLL*CQGKCK
Trigger: TTTGCATTTGCCTTGACACCACAACAGGTGCAGCAG...TACAAACTTAAAATAATCCAGTTTAAACCAGCTCTCTGCATTCTTCATGCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp GCTGGCATGAAGAATGCAGAGAGCTGGTTTAAACTGGATTATTTTAAGTTTGTACCTGATGCTCCAATGTaGAGCTCAAGCAACCATCAA +
Preference number: 4 (lower is better)
Translates to: AGMKNAESWFKLDYFKFVPDAPM*SSSNHQ
Trigger: TTGATGGTTGCTTGAGCTCCACATTGGAGCATCAGG...TACAAACTTAAAATAATCCAGTTTAAACCAGCTCTCTGCATTCTTCATGCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR GCA 90 bp CTGAAGAAAATGTCTCCCCCATTAACCATTAACTGCCTACAAATCTTAGGCTTCCCAGCCTTTAACAAATaGAGGGCTTTTGTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: LKKMSPPLTINCLQILGFPAFNK*RAFVRS
Trigger: ACTTCTTACAAAAGCCCTGCATTTGTTAAAGGCTGG...GAAGCCTAAGATTTGTAGGCAGTTAATGGTTAATGGGGGAGACATTTTCTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR GCA 90 bp TCTTTCACATCCCATTTTGGTATGAAGATCCTCAAGGAAAACTTGTTACCCTGTTGGTGTCAAGGCAAATaGAAAACAGGTTTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: SFTSHFGMKILKENLLPCWCQGK*KTGFPK
Trigger: TTTCGGGAAACCTGTTTTGCATTTGCCTTGACACCA...ACAGGGTAACAAGTTTTCCTTGAGGATCTTCATACCAAAATGGGATGTGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp TACCCTGTTGCCAAAATGCAAGTGCTCACAGCCTTGGATTACATACAGAATACTAAACAAAACCTTAATTaGACCTGCACTGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: YPVAKMQVLTALDYIQNTKQNLN*TCTVKS
Trigger: TGACTTCACAGTGCAGGTCCAATTAAGGTTTTGTTT...AGTATTCTGTATGTAATCCAAGGCTGTGAGCACTTGCATTTTGGCAACAGGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp AGCACAGACAACTTACCACTGGCTATATCACTGAAGAAAATGTCTCCCCCATTAAAACAAAACCTTAATTaGACCTGCACTGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: STDNLPLAISLKKMSPPLKQNLN*TCTVKS
Trigger: TGACTTCACAGTGCAGGTCCAATTAAGGTTTTGTTT...TAATGGGGGAGACATTTTCTTCAGTGATATAGCCAGTGGTAAGTTGTCTGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR TCA 90 bp AAAAGCCATTTTACTGGTTTGGCATGCGGTATGGAAATTCTAAGAGAGAAAGTCATTAAAGCTCTAGAATaGTCCGGATTCCTTATTCCC +
Preference number: 4 (lower is better)
Translates to: KSHFTGLACGMEILREKVIKALE*SGFLIP
Trigger: GGGAATAAGGAATCCGGATCATTCTAGAGCTTTAAT...GACTTTCTCTCTTAGAATTTCCATACCGCATGCCAAACCAGTAAAATGGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR TCA 90 bp GCTGGCATGAAGAATGCAGAGAGCTGGTTTAAACTGGATTATTTTAAGTTTGTATGGAGAACATGCACCTaGTTGTCTCCTGATAAGAAA +
Preference number: 4 (lower is better)
Translates to: AGMKNAESWFKLDYFKFVWRTCT*LSPDKK
Trigger: TTTCTTATCAGGAGACAATCAGGTGCATGTTCTCCA...TACAAACTTAAAATAATCCAGTTTAAACCAGCTCTCTGCATTCTTCATGCCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215501.2
CDS-3UTR GCA 90 bp AAACAAGTTTACCACACACAAAGATGGTCCTTCCACAACTCTGAAAACATGAAGAACCTTAATTGGACCTaGACTGTGAAGTCACATTTG +
Preference number: 4 (lower is better)
Translates to: KQVYHTQRWSFHNSENMKNLNWT*TVKSHL
Trigger: CAAATGTGACTTCACAGTGCAGGTCCAATTAAGGTT...CTTCATGTTTTCAGAGTTGTGGAAGGACCATCTTTGTGTGTGGTAAACTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR GCA 90 bp GTAAAACAGAGCATAGAGTTCTCTTCTGCCAAGTCATTTAATCTGGGATGGGGTGAGGAAGACTTAAAATaGCTTTATTACTTAGTGGTG +
Preference number: 4 (lower is better)
Translates to: VKQSIEFSSAKSFNLGWGEEDLK*LYYLVV
Trigger: CACCACTAAGTAATAAAGGCATTTTAAGTCTTCCTC...ACCCCATCCCAGATTAAATGACTTGGCAGAAGAGAACTCTATGCTCTGTTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CCA 90 bp TACCCTGTTGCCAAAATGCAAGTGCTCACAGCCTTGGATTACATACAGAATACTCAAGATATACTGCCATaGAATAGGTTCTTCCAATTT +
Preference number: 4 (lower is better)
Translates to: YPVAKMQVLTALDYIQNTQDILP*NRFFQF
Trigger: AAATTGGAAGAACCTATTCCATGGCAGTATATCTTG...AGTATTCTGTATGTAATCCAAGGCTGTGAGCACTTGCATTTTGGCAACAGGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS CCA 90 bp TGCGAGGAGGTATACGGGAAAAACCGGGAGGAGTGCAGGAGGTCCTaGTCATCTGAGACCGCCGCTGCAGCTGCGGCTAGCAGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: CEEVYGKNREECRRS*SSETAAAAAASREV
Trigger: CACCTCCCTGCTAGCCGCAGCTGCAGCGGCGGTCTCAGATGACCAGGACCTCCTGCACTCCTCCCGGTTTTTCCCGTATACCTCCTCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS GCA 90 bp TGCTGTTGCTGCCGCTACTGCTTCCGTTGGTGGCTGGCAGAGATGTaGTCCCTCCTGCACTTAGCTGGTCGAGAAACATCTGCGAGGAGG +
Preference number: 5 (lower is better)
Translates to: CCCCRYCFRWWLAEM*SLLHLAGRETSARR
Trigger: CCTCCTCGCAGATGTTTCTCGACCAGCTAAGTGCAGGAGGGAGCACATCTCTGCCAGCCACCAACGGAAGCAGTAGCGGCAGCAACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS GCA 90 bp GGCCATGGCTCTCTCTCAGACTGTTGGAAGACACAAGGCTGCTGTTaGTGCCGCTACTGCTTCCGTTGGTGGCTGGCAGAGATGTGCTCC +
Preference number: 5 (lower is better)
Translates to: GHGSLSDCWKTQGCC*CRYCFRWWLAEMCS
Trigger: GGAGCACATCTCTGCCAGCCACCAACGGAAGCAGTAGCGGCAGCAACAGCAGCCTTGTGTCTTCCAACAGTCTGAGAGAGAGCCATGGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS CCA 90 bp CCAAAGATGGACGCTGTGTCTGCGCTGCTCCTGCTGGCCACACCATaGCCATGGCTCTCTCTCAGACTGTTGGAAGACACAAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PKMDAVSALLLLATP*PWLSLRLLEDTRLL
Trigger: CAGCAGCCTTGTGTCTTCCAACAGTCTGAGAGAGAGCCATGGCCATGGTGTGGCCAGCAGGAGCAGCGCAGACACAGCGTCCATCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS GCA 90 bp GGCAGAGATGTGCTCCCTCCTGCACTTAGCTGGTCGAGAAACATCTaGGAGGAGGTATACGGGAAAAACCGGGAGGAGTGCAGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GRDVLPPALSWSRNI*EEVYGKNREECRRS
Trigger: GGACCTCCTGCACTCCTCCCGGTTTTTCCCGTATACCTCCTCGCAGATGTTTCTCGACCAGCTAAGTGCAGGAGGGAGCACATCTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS GCA 90 bp CATGGCTCTCTCTCAGACTGTTGGAAGACACAAGGCTGCTGTTGCTaGCGCTACTGCTTCCGTTGGTGGCTGGCAGAGATGTGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: HGSLSDCWKTQGCCC*RYCFRWWLAEMCSL
Trigger: GAGGGAGCACATCTCTGCCAGCCACCAACGGAAGCAGTAGCGGCAGCAACAGCAGCCTTGTGTCTTCCAACAGTCTGAGAGAGAGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS GCA 90 bp CACCATGGCCATGGCTCTCTCTCAGACTGTTGGAAGACACAAGGCTaGTGTTGCTGCCGCTACTGCTTCCGTTGGTGGCTGGCAGAGATG +
Preference number: 5 (lower is better)
Translates to: HHGHGSLSDCWKTQG*CCCRYCFRWWLAEM
Trigger: CATCTCTGCCAGCCACCAACGGAAGCAGTAGCGGCAGCAACAGCAGCCTTGTGTCTTCCAACAGTCTGAGAGAGAGCCATGGCCATGGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS CCA 90 bp TGGAAGACACAAGGCTGCTGTTGCTGCCGCTACTGCTTCCGTTGGTaGCTGGCAGAGATGTGCTCCCTCCTGCACTTAGCTGGTCGAGAA +
Preference number: 5 (lower is better)
Translates to: WKTQGCCCCRYCFRW*LAEMCSLLHLAGRE
Trigger: TTCTCGACCAGCTAAGTGCAGGAGGGAGCACATCTCTGCCAGCCACCAACGGAAGCAGTAGCGGCAGCAACAGCAGCCTTGTGTCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS CCA 90 bp TGTTGGAAGACACAAGGCTGCTGTTGCTGCCGCTACTGCTTCCGTTaGTGGCTGGCAGAGATGTGCTCCCTCCTGCACTTAGCTGGTCGA +
Preference number: 5 (lower is better)
Translates to: CWKTQGCCCCRYCFR*WLAEMCSLLHLAGR
Trigger: TCGACCAGCTAAGTGCAGGAGGGAGCACATCTCTGCCAGCCACCAACGGAAGCAGTAGCGGCAGCAACAGCAGCCTTGTGTCTTCCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS GCA 90 bp CTCTCAGACTGTTGGAAGACACAAGGCTGCTGTTGCTGCCGCTACTaGTTCCGTTGGTGGCTGGCAGAGATGTGCTCCCTCCTGCACTTA +
Preference number: 5 (lower is better)
Translates to: LSDCWKTQGCCCCRY*FRWWLAEMCSLLHL
Trigger: TAAGTGCAGGAGGGAGCACATCTCTGCCAGCCACCAACGGAAGCAGTAGCGGCAGCAACAGCAGCCTTGTGTCTTCCAACAGTCTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS CCA 90 bp CTTCCGTTGGTGGCTGGCAGAGATGTGCTCCCTCCTGCACTTAGCTaGTCGAGAAACATCTGCGAGGAGGTATACGGGAAAAACCGGGAG +
Preference number: 5 (lower is better)
Translates to: LPLVAGRDVLPPALS*SRNICEEVYGKNRE
Trigger: CTCCCGGTTTTTCCCGTATACCTCCTCGCAGATGTTTCTCGACCAGCTAAGTGCAGGAGGGAGCACATCTCTGCCAGCCACCAACGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CAA 90 bp CTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTATTCCTCCAGTTACCGGCCTCTCTCTCAGACTGTaGGAAGACACAAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LPWGHDQSHRASIPPVTGLSLRL*EDTRLL
Trigger: CAGCAGCCTTGTGTCTTCCAACAGTCTGAGAGAGAG...GCCGGTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CAA 90 bp AACTATTTGAGATCAATGGGTGGAGCACATACAGAAGTGGAGAGGGCTGACTCCCTACAGCAGGAAGGCTaGGGGTGCGGGACACAGGCG +
Preference number: 5 (lower is better)
Translates to: NYLRSMGGAHTEVERADSLQQEG*GCGTQA
Trigger: CGCCTGTGTCCCGCACCCCAAGCCTTCCTGCTGTAG...GGAGTCAGCCCTCTCCACTTCTGTATGTGCTCCACCCATTGATCTCAAATAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CAA 90 bp CCATCAGTTGCCATCTATCTCCCACTGTCAGAGCATGCTTTCTTCTCTGCGGACCCGCTACTGCTTCCGTaGGTGGCTGGCAGAGATGTG +
Preference number: 5 (lower is better)
Translates to: PSVAIYLPLSEHAFFSADPLLLP*VAGRDV
Trigger: CACATCTCTGCCAGCCACCAACGGAAGCAGTAGCGG...GTCCGCAGAGAAGAAAGCATGCTCTGACAGTGGGAGATAGATGGCAACTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS TCA 90 bp GCTTCTGCAGCTTTATGTCCGGGTGGACTGGGTGCAGCGCTGACGTaGGATGTGGGAGTTCCAGTTCATGTTTGGGTCCCAGAAGAGAAA +
Preference number: 5 (lower is better)
Translates to: ASAALCPGGLGAALT*DVGVPVHVWVPEEK
Trigger: TTTCTCTTCTGGGACCCAAACATGAACTGGAACTCCCACATCTCACGTCAGCGCTGCACCCAGTCCACCCGGACATAAAGCTGCAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
ENSMUST00000216209.2
CDS-3UTR CAA 90 bp CAAACTGAGGAGGAGGGGCGAGTGACGACAGAACAGCACATACAGGTACACAGGGTAAGAAGTTCGTGTTaGCGTCCGTGCTTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: QTEEEGRVTTEQHIQVHRVRSSC*RPCLFL
Trigger: GAGGAACAAGCACGGACGCAAACACGAACTTCTTAC...CCTGTGTACCTGTATGTGCTGTTCTGTCGTCACTCGCCCCTCCTCCTCAGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CAA 90 bp AACTATTTGAGATCAATGGGTGGAGCACATACAGAAGTGGAGAGGGCTGACTCCGAAGGACAGGTCCTCTaGGCAGGGGGTTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: NYLRSMGGAHTEVERADSEGQVL*AGGSSS
Trigger: GGAGGAAGAACCCCCTGCCAAGAGGACCTGTCCTTC...GGAGTCAGCCCTCTCCACTTCTGTATGTGCTCCACCCATTGATCTCAAATAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS TCA 90 bp CCAATGTGGAGCTCAAGCAACCATCAACTCCATTGTAGGAGGCAGTaGCTTCTTGAACCTCCTTCTTTGACCTCATTGGAGCCCACGAGC +
Preference number: 5 (lower is better)
Translates to: PMWSSSNHQLHCRRQ*LLEPPSLTSLEPTS
Trigger: GCTCGTGGGCTCCAATGAGGTCAAAGAAGGAGGTTCAAGAAGTCACTGCCTCCTACAATGGAGTTGATGGTTGCTTGAGCTCCACATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
CDS-3UTR CAA 90 bp GGGCCTTGCTTGGATTGTCCCTTTCCCAAAATCTCTTTGATCAGCCAGCTTGGTGCTAGACTGGTGGGCTaGATCAGTTCATCCAACAGG +
Preference number: 5 (lower is better)
Translates to: GPCLDCPFPKISLISQLGARLVG*ISSSNR
Trigger: CCTGTTGGATGAACTGATCAAGCCCACCAGTCTAGC...ACCAAGCTGGCTGATCAAAGAGATTTTGGGAAAGGGACAATCCAAGCAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CAA 90 bp CCCCTAGCTGGTCTCCTTCCTTTTCCAACAGTCCACTTCAAATGTCAGTGTTGCGATCTGCTGCACCTGTaGTGGTGTCAAGGCAAATGC +
Preference number: 5 (lower is better)
Translates to: PLAGLLPFPTVHFKCQCCDLLHL*WCQGKC
Trigger: GCATTTGCCTTGACACCACAACAGGTGCAGCAGATC...GCAACACTGACATTTGAAGTGGACTGTTGGAAAAGGAAGGAGACCAGCTAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CAA 90 bp ATAGACGAGGCTCATAACTTAAGGCTGGTAAAATCTACGCACACACAAACAGAACTACAGCAGGAAGGCTaGGGGTGCGGGACACAGGCG +
Preference number: 5 (lower is better)
Translates to: IDEAHNLRLVKSTHTQTELQQEG*GCGTQA
Trigger: CGCCTGTGTCCCGCACCCCAAGCCTTCCTGCTGTAG...TTCTGTTTGTGTGTGCGTAGATTTTACCAGCCTTAAGTTATGAGCCTCGTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CAA 90 bp GGAGCACATACAGAAGTGGAGAGGGCTGACTCCACACAGCTGTCCTTTGACTTCGTAGCCCAACAGTACTaGGAGTTCAGAAACTCTAAG +
Preference number: 5 (lower is better)
Translates to: GAHTEVERADSTQLSFDFVAQQY*EFRNSK
Trigger: CTTAGAGTTTCTGAACTCCAAGTACTGTTGGGCTAC...GAAGTCAAAGGACAGCTGTGTGGAGTCAGCCCTCTCCACTTCTGTATGTGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CAA 90 bp ACAGAGCACAGACAACTTACCACTGGCTATATCACTGAAGAAAATGTCTCCCCCCGAAAGCGCTGGCTGTaGTCTGAAGCTAGACTGGTG +
Preference number: 5 (lower is better)
Translates to: TEHRQLTTGYITEENVSPRKRWL*SEARLV
Trigger: CACCAGTCTAGCTTCAGACAACAGCCAGCGCTTTCG...GGGGGAGACATTTTCTTCAGTGATATAGCCAGTGGTAAGTTGTCTGTGCTCTGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CAA 90 bp AGACAACCAAACGGCTTGTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTTTCTTGTTTTTATTaGAGGACTGGTTGTGGGACG +
Preference number: 5 (lower is better)
Translates to: RQPNGLFSRGDMTKATGHLSCFY*RTGCGT
Trigger: CGTCCCACAACCAGTCCTCAAATAAAAACAAGAAAG...ATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAACAAGCCGTTTGGTTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CAA 90 bp TGTTACCCTGTTGCCAAAATGCAAGTGCTCACAGCCTTGGATTACATACAGAATGACACAAGGCTGCTGTaGCTGCCGCTACTGCTTCCG +
Preference number: 5 (lower is better)
Translates to: CYPVAKMQVLTALDYIQNDTRLL*LPLLLP
Trigger: CGGAAGCAGTAGCGGCAGCAACAGCAGCCTTGTGTC...ATTCTGTATGTAATCCAAGGCTGTGAGCACTTGCATTTTGGCAACAGGGTAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS TCA 90 bp GAGCTGTGGAATGGTGGATGGAGAAAGAGTCGGAGGCATAGGACTTaGATGTACGTTGGGGATAGACAAGTCCGCAGGCGTCATAATTTT +
Preference number: 5 (lower is better)
Translates to: ELWNGGWRKSRRHRT*MYVGDRQVRRRHNF
Trigger: AAAATTATGACGCCTGCGGACTTGTCTATCCCCAACGTACATTCAAGTCCTATGCCTCCGACTCTTTCTCCATCCACCATTCCACAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
ENSMUST00000216209.2
CDS-3UTR CAA 90 bp ACATGCTGTGGGCCTTGCTTGGATTGTCCCTTTCCCAAAATCTCTTTGATCAGCGTAAGAAGTTCGTGTTaGCGTCCGTGCTTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: TCCGPCLDCPFPKISLISVRSSC*RPCLFL
Trigger: GAGGAACAAGCACGGACGCAAACACGAACTTCTTAC...GCTGATCAAAGAGATTTTGGGAAAGGGACAATCCAAGCAAGGCCCACAGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CAA 90 bp GTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTATTCCTCCAGTTACCATGACCTCGACTTTCTaGTTTTTATTTGAGGACTGG +
Preference number: 5 (lower is better)
Translates to: VLPWGHDQSHRASIPPVTMTSTF*FLFEDW
Trigger: CCAGTCCTCAAATAAAAACAAGAAAGTCGAGGTCAT...GGTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CAA 90 bp GTTCTCCCGTGGGGACATGACCAAAGCCACAGGGCATCTATTCCTCCAGTTACCTTCTTTAATTTTCATTaGTACAGCAGGACTACAGCC +
Preference number: 5 (lower is better)
Translates to: VLPWGHDQSHRASIPPVTFFNFH*YSRTTA
Trigger: GGCTGTAGTCCTGCTGTACAAATGAAAATTAAAGAA...GGTAACTGGAGGAATAGATGCCCTGTGGCTTTGGTCATGTCCCCACGGGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CAA 90 bp GGAGCACATACAGAAGTGGAGAGGGCTGACTCCACACAGCTGTCCTTTGACTTCATGACCTCGACTTTCTaGTTTTTATTTGAGGACTGG +
Preference number: 5 (lower is better)
Translates to: GAHTEVERADSTQLSFDFMTSTF*FLFEDW
Trigger: CCAGTCCTCAAATAAAAACAAGAAAGTCGAGGTCAT...GAAGTCAAAGGACAGCTGTGTGGAGTCAGCCCTCTCCACTTCTGTATGTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CAA 90 bp AAAAGCCATTTTACTGGTTTGGCATGCGGTATGGAAATTCTAAGAGAGAAAGTCGAAGGACAGGTCCTCTaGGCAGGGGGTTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: KSHFTGLACGMEILREKVEGQVL*AGGSSS
Trigger: GGAGGAAGAACCCCCTGCCAAGAGGACCTGTCCTTC...GACTTTCTCTCTTAGAATTTCCATACCGCATGCCAAACCAGTAAAATGGCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CAA 90 bp ATAGACGAGGCTCATAACTTAAGGCTGGTAAAATCTACGCACACACAAACAGAACGAAAGCGCTGGCTGTaGTCTGAAGCTAGACTGGTG +
Preference number: 5 (lower is better)
Translates to: IDEAHNLRLVKSTHTQTERKRWL*SEARLV
Trigger: CACCAGTCTAGCTTCAGACAACAGCCAGCGCTTTCG...TTCTGTTTGTGTGTGCGTAGATTTTACCAGCCTTAAGTTATGAGCCTCGTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CAA 90 bp GTAAAACAGAGCATAGAGTTCTCTTCTGCCAAGTCATTTAATCTGGGATGGGGTGATCTGCTGCACCTGTaGTGGTGTCAAGGCAAATGC +
Preference number: 5 (lower is better)
Translates to: VKQSIEFSSAKSFNLGWGDLLHL*WCQGKC
Trigger: GCATTTGCCTTGACACCACAACAGGTGCAGCAGATC...ACCCCATCCCAGATTAAATGACTTGGCAGAAGAGAACTCTATGCTCTGTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CAA 90 bp GAAGTGGAGAGGGCTGACTCCACACAGCTGTCCTTTGACTTCCAAATACATGCTGATTCCTTATTCCCTTaGCTCGTAACCTCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: EVERADSTQLSFDFQIHADSLFP*LVTSEE
Trigger: TTCTTCAGAGGTTACGAGCAAAGGGAATAAGGAATC...AGCATGTATTTGGAAGTCAAAGGACAGCTGTGTGGAGTCAGCCCTCTCCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CAA 90 bp CCCCTAGCTGGTCTCCTTCCTTTTCCAACAGTCCACTTCAAATGTCAGTGTTGCCTTTCTTGTTTTTATTaGAGGACTGGTTGTGGGACG +
Preference number: 5 (lower is better)
Translates to: PLAGLLPFPTVHFKCQCCLSCFY*RTGCGT
Trigger: CGTCCCACAACCAGTCCTCAAATAAAAACAAGAAAG...GCAACACTGACATTTGAAGTGGACTGTTGGAAAAGGAAGGAGACCAGCTAGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS TCA 90 bp AGAAACAACAATGGTATTTGGTACTGTCGTGGACAATCGGACAAGTaGGGTGATATTAATTGGTCGGCTAGGTCGCTTTGGTTCCACACC +
Preference number: 5 (lower is better)
Translates to: RNNNGIWYCRGQSDK*GDINWSARSLWFHT
Trigger: GGTGTGGAACCAAAGCGACCTAGCCGACCAATTAATATCACCTCACTTGTCCGATTGTCCACGACAGTACCAAATACCATTGTTGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
CDS-3UTR CAA 90 bp AGCACAGACAACTTACCACTGGCTATATCACTGAAGAAAATGTCTCCCCCATTAGGACTTGAATGTACGTaGGGGATAGACAAGTCCGCA +
Preference number: 5 (lower is better)
Translates to: STDNLPLAISLKKMSPPLGLECT*GIDKSA
Trigger: TGCGGACTTGTCTATCCCCAACGTACATTCAAGTCC...TAATGGGGGAGACATTTTCTTCAGTGATATAGCCAGTGGTAAGTTGTCTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CAA 90 bp TCTTTCACATCCCATTTTGGTATGAAGATCCTCAAGGAAAACTTGTTACCCTGTGCTAGACTGGTGGGCTaGATCAGTTCATCCAACAGG +
Preference number: 5 (lower is better)
Translates to: SFTSHFGMKILKENLLPCARLVG*ISSSNR
Trigger: CCTGTTGGATGAACTGATCAAGCCCACCAGTCTAGC...ACAGGGTAACAAGTTTTCCTTGAGGATCTTCATACCAAAATGGGATGTGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CAA 90 bp CCCTCCTGGCTGAATGGCTACTTTATTGATGGTGTGTGCTTACAGAAAGACGGGTCTGAAGAAGAACTGTaGAGGACAACTGTTTTACAA +
Preference number: 5 (lower is better)
Translates to: PSWLNGYFIDGVCLQKDGSEEEL*RTTVLQ
Trigger: TTGTAAAACAGTTGTCCTCAACAGTTCTTCTTCAGA...CCCGTCTTTCTGTAAGCACACACCATCAATAAAGTAGCCATTCAGCCAGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS TCA 90 bp GGTAGACAGCAGATCACAGAGGATCTGGGATGGAGAACATGCACCTaGTTGTCTCCTGATAAGAAAGGAAAGAAATCTAATCCTTGTAAG +
Preference number: 5 (lower is better)
Translates to: GRQQITEDLGWRTCT*LSPDKKGKKSNPCK
Trigger: CTTACAAGGATTAGATTTCTTTCCTTTCTTATCAGGAGACAATCAGGTGCATGTTCTCCATCCCAGATCCTCTGTGATCTGCTGTCTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215501.2
CDS-3UTR CAA 90 bp AAACAAGTTTACCACACACAAAGATGGTCCTTCCACAACTCTGAAAACATGAAGGGACTTGAATGTACGTaGGGGATAGACAAGTCCGCA +
Preference number: 5 (lower is better)
Translates to: KQVYHTQRWSFHNSENMKGLECT*GIDKSA
Trigger: TGCGGACTTGTCTATCCCCAACGTACATTCAAGTCC...CTTCATGTTTTCAGAGTTGTGGAAGGACCATCTTTGTGTGTGGTAAACTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CAA 90 bp AGCACAGACAACTTACCACTGGCTATATCACTGAAGAAAATGTCTCCCCCATTAAGTTCCAGTTCATGTTaGGGTCCCAGAAGAGAAACA +
Preference number: 5 (lower is better)
Translates to: STDNLPLAISLKKMSPPLSSSSC*GPRRET
Trigger: TGTTTCTCTTCTGGGACCCAAACATGAACTGGAACT...TAATGGGGGAGACATTTTCTTCAGTGATATAGCCAGTGGTAAGTTGTCTGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS GCA 90 bp TTAATTTTCATTTGTACAGCAGGACTACAGCCAGCCTTTAACAAATaGAGGGCTTTTGTAAGAAGTTCGTGTTTGCGTCCGTGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: LIFICTAGLQPAFNK*RAFVRSSCLRPCLF
Trigger: GAACAAGCACGGACGCAAACACGAACTTCTTACAAAAGCCCTGCATTTGTTAAAGGCTGGCTGTAGTCCTGCTGTACAAATGAAAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
ENSMUST00000216209.2
CDS-3UTR CAA 90 bp ATAGACGAGGCTCATAACTTAAGGCTGGTAAAATCTACGCACACACAAACAGAAGTAGCCCAACAGTACTaGGAGTTCAGAAACTCTAAG +
Preference number: 5 (lower is better)
Translates to: IDEAHNLRLVKSTHTQTEVAQQY*EFRNSK
Trigger: CTTAGAGTTTCTGAACTCCAAGTACTGTTGGGCTAC...TTCTGTTTGTGTGTGCGTAGATTTTACCAGCCTTAAGTTATGAGCCTCGTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CAA 90 bp GGTCTCCTTCCTTTTCCAACAGTCCACTTCAAATGTCAGTGTTGCTTACAGAGCTCTGAAGAAGAACTGTaGAGGACAACTGTTTTACAA +
Preference number: 5 (lower is better)
Translates to: GLLPFPTVHFKCQCCLQSSEEEL*RTTVLQ
Trigger: TTGTAAAACAGTTGTCCTCAACAGTTCTTCTTCAGA...GCTCTGTAAGCAACACTGACATTTGAAGTGGACTGTTGGAAAAGGAAGGAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214830.2
CDS-3UTR CAA 90 bp AAACAAGTTTACCACACACAAAGATGGTCCTTCCACAACTCTGAAAACATGAAGAGTTCCAGTTCATGTTaGGGTCCCAGAAGAGAAACA +
Preference number: 5 (lower is better)
Translates to: KQVYHTQRWSFHNSENMKSSSSC*GPRRET
Trigger: TGTTTCTCTTCTGGGACCCAAACATGAACTGGAACT...CTTCATGTTTTCAGAGTTGTGGAAGGACCATCTTTGTGTGTGGTAAACTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS-3UTR CAA 90 bp GCTGGCATGAAGAATGCAGAGAGCTGGTTTAAACTGGATTATTTTAAGTTTGTAGATTCCTTATTCCCTTaGCTCGTAACCTCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: AGMKNAESWFKLDYFKFVDSLFP*LVTSEE
Trigger: TTCTTCAGAGGTTACGAGCAAAGGGAATAAGGAATC...TACAAACTTAAAATAATCCAGTTTAAACCAGCTCTCTGCATTCTTCATGCCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS CCA 72 bp GTATACGGGAAAAACCGGGAGGAGTGCAGGAGGTCCTaGTCATCTGAGACCGCCGCTGCAGCTGCGGCTAGC +
Preference number: 6 (lower is better)
Translates to: VYGKNREECRRS*SSETAAAAAAS
Trigger: GCTAGCCGCAGCTGCAGCGGCGGTCTCAGATGACCAGGACCTCCTGCACTCCTCCCGGTTTTTCCCGTATAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS CCA 72 bp GACGCTGTGTCTGCGCTGCTCCTGCTGGCCACACCATaGCCATGGCTCTCTCTCAGACTGTTGGAAGACACA +
Preference number: 6 (lower is better)
Translates to: DAVSALLLLATP*PWLSLRLLEDT
Trigger: TGTGTCTTCCAACAGTCTGAGAGAGAGCCATGGCCATGGTGTGGCCAGCAGGAGCAGCGCAGACACAGCGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS CCA 72 bp TGCCAAAGATGGACGCTGTGTCTGCGCTGCTCCTGCTaGCCACACCATGGCCATGGCTCTCTCTCAGACTGT +
Preference number: 6 (lower is better)
Translates to: CQRWTLCLRCSC*PHHGHGSLSDC
Trigger: ACAGTCTGAGAGAGAGCCATGGCCATGGTGTGGCCAGCAGGAGCAGCGCAGACACAGCGTCCATCTTTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS CAA 90 bp CTGTTGGAAGACACAAGGCTGCTGTTGCTGCCGCTACTGCTTCCGTaGGTGGCTGGCAGAGATGTGCTCCCTCCTGCACTTAGCTGGTCG +
Preference number: 6 (lower is better)
Translates to: LLEDTRLLLLPLLLP*VAGRDVLPPALSWS
Trigger: CGACCAGCTAAGTGCAGGAGGGAGCACATCTCTGCCAGCCACCAACGGAAGCAGTAGCGGCAGCAACAGCAGCCTTGTGTCTTCCAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS CAA 90 bp CTGCTCCTGCTGGCCACACCATGGCCATGGCTCTCTCTCAGACTGTaGGAAGACACAAGGCTGCTGTTGCTGCCGCTACTGCTTCCGTTG +
Preference number: 6 (lower is better)
Translates to: LLLLATPWPWLSLRL*EDTRLLLLPLLLPL
Trigger: CAACGGAAGCAGTAGCGGCAGCAACAGCAGCCTTGTGTCTTCCAACAGTCTGAGAGAGAGCCATGGCCATGGTGTGGCCAGCAGGAGCAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS CAA 90 bp TGGCCATGGCTCTCTCTCAGACTGTTGGAAGACACAAGGCTGCTGTaGCTGCCGCTACTGCTTCCGTTGGTGGCTGGCAGAGATGTGCTC +
Preference number: 6 (lower is better)
Translates to: WPWLSLRLLEDTRLL*LPLLLPLVAGRDVL
Trigger: GAGCACATCTCTGCCAGCCACCAACGGAAGCAGTAGCGGCAGCAACAGCAGCCTTGTGTCTTCCAACAGTCTGAGAGAGAGCCATGGCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS GCA 72 bp TGTTGGAAGACACAAGGCTGCTGTTGCTGCCGCTACTaGTTCCGTTGGTGGCTGGCAGAGATGTGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: CWKTQGCCCCRY*FRWWLAEMCSL
Trigger: GAGGGAGCACATCTCTGCCAGCCACCAACGGAAGCAGTAGCGGCAGCAACAGCAGCCTTGTGTCTTCCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS CAA 72 bp CTGGCCACACCATGGCCATGGCTCTCTCTCAGACTGTaGGAAGACACAAGGCTGCTGTTGCTGCCGCTACTG +
Preference number: 6 (lower is better)
Translates to: LATPWPWLSLRL*EDTRLLLLPLL
Trigger: CAGTAGCGGCAGCAACAGCAGCCTTGTGTCTTCCAACAGTCTGAGAGAGAGCCATGGCCATGGTGTGGCCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS TCA 72 bp GCTTTATGTCCGGGTGGACTGGGTGCAGCGCTGACGTaGGATGTGGGAGTTCCAGTTCATGTTTGGGTCCCA +
Preference number: 6 (lower is better)
Translates to: ALCPGGLGAALT*DVGVPVHVWVP
Trigger: TGGGACCCAAACATGAACTGGAACTCCCACATCTCACGTCAGCGCTGCACCCAGTCCACCCGGACATAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
ENSMUST00000216209.2
CDS TCA 72 bp CTGCAGCTTTATGTCCGGGTGGACTGGGTGCAGCGCTaGCGTGAGATGTGGGAGTTCCAGTTCATGTTTGGG +
Preference number: 6 (lower is better)
Translates to: LQLYVRVDWVQR*REMWEFQFMFG
Trigger: CCCAAACATGAACTGGAACTCCCACATCTCACGTCAGCGCTGCACCCAGTCCACCCGGACATAAAGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
ENSMUST00000216209.2
CDS GCA 72 bp GTGCTCCCTCCTGCACTTAGCTGGTCGAGAAACATCTaGGAGGAGGTATACGGGAAAAACCGGGAGGAGTGC +
Preference number: 6 (lower is better)
Translates to: VLPPALSWSRNI*EEVYGKNREEC
Trigger: GCACTCCTCCCGGTTTTTCCCGTATACCTCCTCGCAGATGTTTCTCGACCAGCTAAGTGCAGGAGGGAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS GCA 72 bp TGCCGCTACTGCTTCCGTTGGTGGCTGGCAGAGATGTaGTCCCTCCTGCACTTAGCTGGTCGAGAAACATCT +
Preference number: 6 (lower is better)
Translates to: CRYCFRWWLAEM*SLLHLAGRETS
Trigger: AGATGTTTCTCGACCAGCTAAGTGCAGGAGGGAGCACATCTCTGCCAGCCACCAACGGAAGCAGTAGCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS GCA 72 bp CTCTCAGACTGTTGGAAGACACAAGGCTGCTGTTGCTaGCGCTACTGCTTCCGTTGGTGGCTGGCAGAGATG +
Preference number: 6 (lower is better)
Translates to: LSDCWKTQGCCC*RYCFRWWLAEM
Trigger: CATCTCTGCCAGCCACCAACGGAAGCAGTAGCGGCAGCAACAGCAGCCTTGTGTCTTCCAACAGTCTGAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS GCA 72 bp TCTCTCTCAGACTGTTGGAAGACACAAGGCTGCTGTTaGTGCCGCTACTGCTTCCGTTGGTGGCTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: SLSDCWKTQGCC*CRYCFRWWLAE
Trigger: CTCTGCCAGCCACCAACGGAAGCAGTAGCGGCAGCAACAGCAGCCTTGTGTCTTCCAACAGTCTGAGAGAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS GCA 72 bp CATGGCTCTCTCTCAGACTGTTGGAAGACACAAGGCTaGTGTTGCTGCCGCTACTGCTTCCGTTGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: HGSLSDCWKTQG*CCCRYCFRWWL
Trigger: CAGCCACCAACGGAAGCAGTAGCGGCAGCAACAGCAGCCTTGTGTCTTCCAACAGTCTGAGAGAGAGCCATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS GCA 72 bp AATGTCTGGTATGATGCCAAAGATGGACGCTGTGTCTaGGCTGCTCCTGCTGGCCACACCATGGCCATGGCT +
Preference number: 6 (lower is better)
Translates to: NVWYDAKDGRCV*AAPAGHTMAMA
Trigger: AGCCATGGCCATGGTGTGGCCAGCAGGAGCAGCGCAGACACAGCGTCCATCTTTGGCATCATACCAGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS CAA 72 bp CTCTCTCTCAGACTGTTGGAAGACACAAGGCTGCTGTaGCTGCCGCTACTGCTTCCGTTGGTGGCTGGCAGA +
Preference number: 6 (lower is better)
Translates to: LSLRLLEDTRLL*LPLLLPLVAGR
Trigger: TCTGCCAGCCACCAACGGAAGCAGTAGCGGCAGCAACAGCAGCCTTGTGTCTTCCAACAGTCTGAGAGAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS CCA 72 bp GGTGTTGATGTAGCTTGTATCTACAGCAGGAAGGCTTaGGGTGCGGGACACAGGCGAGGCTTGATGAGGAAG +
Preference number: 6 (lower is better)
Translates to: GVDVACIYSRKA*GAGHRRGLMRK
Trigger: CTTCCTCATCAAGCCTCGCCTGTGTCCCGCACCCCAAGCCTTCCTGCTGTAGATACAAGCTACATCAACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
CDS CCA 72 bp GTGGCTGGCAGAGATGTGCTCCCTCCTGCACTTAGCTaGTCGAGAAACATCTGCGAGGAGGTATACGGGAAA +
Preference number: 6 (lower is better)
Translates to: VAGRDVLPPALS*SRNICEEVYGK
Trigger: TTTCCCGTATACCTCCTCGCAGATGTTTCTCGACCAGCTAAGTGCAGGAGGGAGCACATCTCTGCCAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098651.6
CDS CCA 72 bp AGGACTGGTTGTGGGACGCTACCTGATGCTCCAATGTaGAGCTCAAGCAACCATCAACTCCATTGTAGGAGG +
Preference number: 6 (lower is better)
Translates to: RTGCGTLPDAPM*SSSNHQLHCRR
Trigger: CCTCCTACAATGGAGTTGATGGTTGCTTGAGCTCCACATTGGAGCATCAGGTAGCGTCCCACAACCAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
CDS CAA 72 bp AGCGCTGACGTGAGATGTGGGAGTTCCAGTTCATGTTaGGGTCCCAGAAGAGAAACAGGGAGTAGTGGGGAT +
Preference number: 6 (lower is better)
Translates to: SADVRCGSSSSC*GPRRETGSSGD
Trigger: ATCCCCACTACTCCCTGTTTCTCTTCTGGGACCCAAACATGAACTGGAACTCCCACATCTCACGTCAGCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
ENSMUST00000216209.2
CDS TCA 72 bp AATGGTGGATGGAGAAAGAGTCGGAGGCATAGGACTTaGATGTACGTTGGGGATAGACAAGTCCGCAGGCGT +
Preference number: 6 (lower is better)
Translates to: NGGWRKSRRHRT*MYVGDRQVRRR
Trigger: ACGCCTGCGGACTTGTCTATCCCCAACGTACATTCAAGTCCTATGCCTCCGACTCTTTCTCCATCCACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
ENSMUST00000216209.2
CDS CCA 72 bp GTCAAGGCAAATGCAAAACAGGTTTCCCGAAAGCGCTaGCTGTTGTCTGAAGCTAGACTGGTGGGCTTGATC +
Preference number: 6 (lower is better)
Translates to: VKANAKQVSRKR*LLSEARLVGLI
Trigger: GATCAAGCCCACCAGTCTAGCTTCAGACAACAGCCAGCGCTTTCGGGAAACCTGTTTTGCATTTGCCTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
ENSMUST00000216209.2
CDS TCA 72 bp AGCGCTGGCTGTTGTCTGAAGCTAGACTGGTGGGCTTaGTCAGTTCATCCAACAGGTCATAGAATGGTAGCT +
Preference number: 6 (lower is better)
Translates to: SAGCCLKLDWWA*SVHPTGHRMVA
Trigger: AGCTACCATTCTATGACCTGTTGGATGAACTGATCAAGCCCACCAGTCTAGCTTCAGACAACAGCCAGCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
ENSMUST00000216209.2
CDS CAA 72 bp GCAAATGCAAAACAGGTTTCCCGAAAGCGCTGGCTGTaGTCTGAAGCTAGACTGGTGGGCTTGATCAGTTCA +
Preference number: 6 (lower is better)
Translates to: ANAKQVSRKRWL*SEARLVGLISS
Trigger: TGAACTGATCAAGCCCACCAGTCTAGCTTCAGACAACAGCCAGCGCTTTCGGGAAACCTGTTTTGCATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
ENSMUST00000216209.2
CDS CAA 72 bp TCCGTGCTTGTTCCTCCCAGCGTAGCCCAACAGTACTaGGAGTTCAGAAACTCTAAGGCTCATAACCATTTG +
Preference number: 6 (lower is better)
Translates to: SVLVPPSVAQQY*EFRNSKAHNHL
Trigger: CAAATGGTTATGAGCCTTAGAGTTTCTGAACTCCAAGTACTGTTGGGCTACGCTGGGAGGAACAAGCACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
CDS CAA 72 bp GGAGAAAGAGTCGGAGGCATAGGACTTGAATGTACGTaGGGGATAGACAAGTCCGCAGGCGTCATAATTTTC +
Preference number: 6 (lower is better)
Translates to: GERVGGIGLECT*GIDKSAGVIIF
Trigger: GAAAATTATGACGCCTGCGGACTTGTCTATCCCCAACGTACATTCAAGTCCTATGCCTCCGACTCTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
ENSMUST00000216209.2
CDS CAA 72 bp AGAAATATCCATGGAGCTGCTGATCTGCTGCACCTGTaGTGGTGTCAAGGCAAATGCAAAACAGGTTTCCCG +
Preference number: 6 (lower is better)
Translates to: RNIHGAADLLHL*WCQGKCKTGFP
Trigger: CGGGAAACCTGTTTTGCATTTGCCTTGACACCACAACAGGTGCAGCAGATCAGCAGCTCCATGGATATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
ENSMUST00000216209.2
CDS GCA 72 bp CATTTGGTCCCAGAAATATCCATGGAGCTGCTGATCTaGTGCACCTGTTGTGGTGTCAAGGCAAATGCAAAA +
Preference number: 6 (lower is better)
Translates to: HLVPEISMELLI*CTCCGVKANAK
Trigger: TTTTGCATTTGCCTTGACACCACAACAGGTGCAGCAGATCAGCAGCTCCATGGATATTTCTGGGACCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
ENSMUST00000216209.2
CDS CCA 72 bp AATATCCATGGAGCTGCTGATCTGCTGCACCTGTTGTaGTGTCAAGGCAAATGCAAAACAGGTTTCCCGAAA +
Preference number: 6 (lower is better)
Translates to: NIHGAADLLHLL*CQGKCKTGFPK
Trigger: TTTCGGGAAACCTGTTTTGCATTTGCCTTGACACCACAACAGGTGCAGCAGATCAGCAGCTCCATGGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
ENSMUST00000216209.2
CDS TCA 72 bp AATGGTATTTGGTACTGTCGTGGACAATCGGACAAGTaGGGTGATATTAATTGGTCGGCTAGGTCGCTTTGG +
Preference number: 6 (lower is better)
Translates to: NGIWYCRGQSDK*GDINWSARSLW
Trigger: CCAAAGCGACCTAGCCGACCAATTAATATCACCTCACTTGTCCGATTGTCCACGACAGTACCAAATACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
CDS TCA 72 bp TTGTTTTTATTTGAGGACTGGTTGTGGGACGCTACCTaGTGCTCCAATGTGGAGCTCAAGCAACCATCAACT +
Preference number: 6 (lower is better)
Translates to: LFLFEDWLWDAT*CSNVELKQPST
Trigger: AGTTGATGGTTGCTTGAGCTCCACATTGGAGCATCAGGTAGCGTCCCACAACCAGTCCTCAAATAAAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
CDS GCA 72 bp ATTTGTACAGCAGGACTACAGCCAGCCTTTAACAAATaGAGGGCTTTTGTAAGAAGTTCGTGTTTGCGTCCG +
Preference number: 6 (lower is better)
Translates to: ICTAGLQPAFNK*RAFVRSSCLRP
Trigger: CGGACGCAAACACGAACTTCTTACAAAAGCCCTGCATTTGTTAAAGGCTGGCTGTAGTCCTGCTGTACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
ENSMUST00000216209.2
CDS CAA 72 bp GAGCTGTCAATGGTTAGGTCAATGACCTCGACTTTCTaGTTTTTATTTGAGGACTGGTTGTGGGACGCTACC +
Preference number: 6 (lower is better)
Translates to: ELSMVRSMTSTF*FLFEDWLWDAT
Trigger: GGTAGCGTCCCACAACCAGTCCTCAAATAAAAACAAGAAAGTCGAGGTCATTGACCTAACCATTGACAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
CDS TCA 72 bp CCTCTTCATCTGACGAGCTGTCAATGGTTAGGTCAATaGCCTCGACTTTCTTGTTTTTATTTGAGGACTGGT +
Preference number: 6 (lower is better)
Translates to: PLHLTSCQWLGQ*PRLSCFYLRTG
Trigger: ACCAGTCCTCAAATAAAAACAAGAAAGTCGAGGTCATTGACCTAACCATTGACAGCTCGTCAGATGAAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
CDS CCA 72 bp GGCTGCAAGGTTTTGTATTCACTTTTACACAAAGGTTaGGTGGGAAGTGATCTTCTTGTGGACAACTGGTTT +
Preference number: 6 (lower is better)
Translates to: GCKVLYSLLHKG*VGSDLLVDNWF
Trigger: AAACCAGTTGTCCACAAGAAGATCACTTCCCACCCAACCTTTGTGTAAAAGTGAATACAAAACCTTGCAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
ENSMUST00000216209.2
CDS CAA 90 bp CCGGATTCCTTATTCCCTTTGCTCGTAACCTCTGAAGAAGAACTGTaGAGGACAACTGTTTTACAAGATATACTGCCATGGAATAGGTTC +
Preference number: 6 (lower is better)
Translates to: PDSLFPLLVTSEEEL*RTTVLQDILPWNRF
Trigger: GAACCTATTCCATGGCAGTATATCTTGTAAAACAGTTGTCCTCAACAGTTCTTCTTCAGAGGTTACGAGCAAAGGGAATAAGGAATCCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
CDS TCA 72 bp CAGATCACAGAGGATCTGGGATGGAGAACATGCACCTaGTTGTCTCCTGATAAGAAAGGAAAGAAATCTAAT +
Preference number: 6 (lower is better)
Translates to: QITEDLGWRTCT*LSPDKKGKKSN
Trigger: ATTAGATTTCTTTCCTTTCTTATCAGGAGACAATCAGGTGCATGTTCTCCATCCCAGATCCTCTGTGATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215501.2
CDS CAA 72 bp TTATTCCCTTTGCTCGTAACCTCTGAAGAAGAACTGTaGAGGACAACTGTTTTACAAGATATACTGCCATGG +
Preference number: 6 (lower is better)
Translates to: LFPLLVTSEEEL*RTTVLQDILPW
Trigger: CCATGGCAGTATATCTTGTAAAACAGTTGTCCTCAACAGTTCTTCTTCAGAGGTTACGAGCAAAGGGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
CDS TCA 72 bp TCTGCAGTTAACTTCTCTTTAATTAAAGCTCTAGAATaGTCCGGATTCCTTATTCCCTTTGCTCGTAACCTC +
Preference number: 6 (lower is better)
Translates to: SAVNFSLIKALE*SGFLIPFARNL
Trigger: GAGGTTACGAGCAAAGGGAATAAGGAATCCGGATCATTCTAGAGCTTTAATTAAAGAGAAGTTAACTGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
CDS TCA 72 bp TTTGTATTCACTTTTACACAAAGGTTGGGTGGGAAGTaGTCTTCTTGTGGACAACTGGTTTCTGATAAACAA +
Preference number: 6 (lower is better)
Translates to: FVFTFTQRLGGK*SSCGQLVSDKQ
Trigger: TTGTTTATCAGAAACCAGTTGTCCACAAGAAGATCACTTCCCACCCAACCTTTGTGTAAAAGTGAATACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098651.6
ENSMUST00000214830.2
ENSMUST00000216209.2