Pregenerated sensors for PIANP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030329Ensembl transcript IDs: ENSMUST00000032479.11, ENSMUST00000159391.8, ENSMUST00000160666.2, ENSMUST00000160704.8, ENSMUST00000161292.2, ENSMUST00000162000.4, ENSMUST00000162170.8
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGCCCCCTTGGGAGGCCCAGGAACCAGGTCAGGAAGGGTGTCATaGACTGCATTAGGGAAGACCACCCACCCAGGAAAGATAACTGAA | + |
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Preference number: 1 (lower is better) Translates to: PAPLGGPGTRSGRVS*TALGKTTHPGKITE Trigger: TTCAGTTATCTTTCCTGGGTGGGTGGTCTTCCCTAATGCAGTCCATGACACCCTTCCTGACCTGGTTCCTGGGCCTCCCAAGGGGGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162000.4 |
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| 3UTR CCA 90 bp | AGTTCCTGGCAGCCTAGGTACATTAAGGGAGGCCTTAGGGGAGGGTaGGAGATGGAGGACCTGTTGAGGGGGCTCCGAATTCCATACAGA | + |
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Preference number: 1 (lower is better) Translates to: SSWQPRYIKGGLRGG*EMEDLLRGLRIPYR Trigger: TCTGTATGGAATTCGGAGCCCCCTCAACAGGTCCTCCATCTCCCACCCTCCCCTAAGGCCTCCCTTAATGTACCTAGGCTGCCAGGAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR CCA 90 bp | TGGGTGAGTGTGCAAGGCTTTCATGTGAATGTGCAAGGGTGGGAATaGGAGACCCCAGTCACTGGAGGACAAACGCTTGGGCTTGCCCAT | + |
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Preference number: 1 (lower is better) Translates to: WVSVQGFHVNVQGWE*ETPVTGGQTLGLAH Trigger: ATGGGCAAGCCCAAGCGTTTGTCCTCCAGTGACTGGGGTCTCCCATTCCCACCCTTGCACATTCACATGAAAGCCTTGCACACTCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR CCA 90 bp | AGGGTGTGGGTGAGTGTGCAAGGCTTTCATGTGAATGTGCAAGGGTaGGAATGGGAGACCCCAGTCACTGGAGGACAAACGCTTGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: RVWVSVQGFHVNVQG*EWETPVTGGQTLGL Trigger: AAGCCCAAGCGTTTGTCCTCCAGTGACTGGGGTCTCCCATTCCCACCCTTGCACATTCACATGAAAGCCTTGCACACTCACCCACACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR CCA 90 bp | TGGAATGGAATGGAAAGACACAGATGTGAATGGGGCCATGACAAATaGTACAAGGAGCCCCTAGCTCACCTCCCACCCACCTCTAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: WNGMERHRCEWGHDK*YKEPLAHLPPTSRA Trigger: TGCCCTAGAGGTGGGTGGGAGGTGAGCTAGGGGCTCCTTGTACCATTTGTCATGGCCCCATTCACATCTGTGTCTTTCCATTCCATTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR CCA 90 bp | TCCTGTGGGGGAGCCCTCAGTAATACCAGCATCCTTGGAATGGAATaGAAAGACACAGATGTGAATGGGGCCATGACAAATGGTACAAGG | + |
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Preference number: 1 (lower is better) Translates to: SCGGALSNTSILGME*KDTDVNGAMTNGTR Trigger: CCTTGTACCATTTGTCATGGCCCCATTCACATCTGTGTCTTTCCATTCCATTCCAAGGATGCTGGTATTACTGAGGGCTCCCCCACAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAACATGGGGGCTATGCTGGCCACTTaGCCTCCTGCTTGGCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: MVAMLATWPPAWQHPNMGAMLAT*PPAWQH Trigger: GTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGC...CCCCATGTTGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCTTCAGTTCCTGGCAGCCTAGGGGCCTTAGGGGAGGGTaGGAGATGGAGGACCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: GRAPNGLEPAGFSSWQPRGLRGG*EMEDLL Trigger: CAACAGGTCCTCCATCTCCCACCCTCCCCTAAGGCC...CCTAGGCTGCCAGGAACTGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTGCAAGGGTGGGAATGGGAGACCCCAGTCACTGGAGGACAAACGCTTGGGCTCTGACCAGCCCCCTTaGGAGGCCCAGGAACCAGGT | + |
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Preference number: 2 (lower is better) Translates to: MCKGGNGRPQSLEDKRLGSDQPP*EAQEPG Trigger: ACCTGGTTCCTGGGCCTCCCAAGGGGGCTGGTCAGA...GCCCAAGCGTTTGTCCTCCAGTGACTGGGGTCTCCCATTCCCACCCTTGCACAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162000.4 |
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| 3UTR-3UTR GCA 90 bp | GAGCAGCGTGGAGAGCGTGACTGTGCTATGGCCTGTGAGGGTGTGGGTGAGTGTAGTGGATGGTGGCTATaGTGGCCACTTGGCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: EQRGERDCAMACEGVGECSGWWL*WPLGLL Trigger: CAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACT...ACACTCACCCACACCCTCACAGGCCATAGCACAGTCACGCTCTCCACGCTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGAGAAGGGTGGATATGGAGGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCCCAATTCCCCAGGGTTaGCCCACCCTCAGTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: GEKGGYGGRAPNGLEPAGPIPQG*PTLSGW Trigger: CCATCCACTGAGGGTGGGGCAACCCTGGGGAATTGG...GCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCCTCCATATCCACCCTTCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCTTCAGTTCCTGGCAGCCTAGGTACATTAAGGGAGGCCTTAGGGGAGGGCCAATTCCCCAGGGTTaGCCCACCCTCAGTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: AGFSSWQPRYIKGGLRGGPIPQG*PTLSGW Trigger: CCATCCACTGAGGGTGGGGCAACCCTGGGGAATTGG...CCCTCCCCTAAGGCCTCCCTTAATGTACCTAGGCTGCCAGGAACTGAAGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGCGTGGAGAGCGTGACTGTGCTATGGCCTGTGAGGGTGTGGGTGAGTGTGTGCAAGGGTGGGAATaGGAGACCCCAGTCACTGGA | + |
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Preference number: 2 (lower is better) Translates to: EQRGERDCAMACEGVGECVQGWE*ETPVTG Trigger: TCCAGTGACTGGGGTCTCCCATTCCCACCCTTGCAC...ACACTCACCCACACCCTCACAGGCCATAGCACAGTCACGCTCTCCACGCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CCA 90 bp | CATGGGATTAGTGAGTGTCCCAGGTTGTGTGCAAGGACAGGAGCTAGGAGCCCCGCTATGCTGGCCACTTaGCCTCCTGCTTGGCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: HGISECPRLCARTGARSPAMLAT*PPAWQH Trigger: GTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGC...GGGGCTCCTAGCTCCTGTCCTTGCACACAACCTGGGACACTCACTAATCCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR TCA 90 bp | GACAGCCAGGACCGACAAAACAAGGGACTTGGGAGGGAAGGGAGGACATGGGAGTGCTCGTGCCCAGTCTaGGATGGGCACAGAGAATGT | + |
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Preference number: 2 (lower is better) Translates to: DSQDRQNKGLGREGRTWECSCPV*DGHREC Trigger: ACATTCTCTGTGCCCATCTCAGACTGGGCACGAGCA...CTCCCATGTCCTCCCTTCCCTCCCAAGTCCCTTGTTTTGTCGGTCCTGGCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCATGGGATTAGTGAGTGTCCCAGGTTGTGTGCAAGGACAGGAGCTAGGAGCGGATGGTGGCTATGCTaGCCACTTGGCCTCCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: AHGISECPRLCARTGARSGWWLC*PLGLLL Trigger: AAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCC...GCTCCTAGCTCCTGTCCTTGCACACAACCTGGGACACTCACTAATCCCATGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAGGGTGGATATGGAGGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCTTCAAGTGGATGGTGGCTATaGTGGCCACTTGGCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: RRVDMEAELPMALNQLASSGWWL*WPLGLL Trigger: CAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACT...TGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCCTCCATATCCACCCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CCA 90 bp | AGACCAGTGGGTGCTGATGAGGCAGAGTGGGCACACTATGCCATATATTGGAGCGCTATGCTGGCCACTTaGCCTCCTGCTTGGCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: RPVGADEAEWAHYAIYWSAMLAT*PPAWQH Trigger: GTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGC...GCTCCAATATATGGCATAGTGTGCCCACTCTGCCTCATCAGCACCCACTGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGGTGGATATGGAGGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCTTCAGGAGACCCCAGTCACTaGAGGACAAACGCTTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: RRVDMEAELPMALNQLASGDPSH*RTNAWA Trigger: AGCCCAAGCGTTTGTCCTCCAGTGACTGGGGTCTCC...TGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCCTCCATATCCACCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTACAAGGAGCCCCTAGCTCACCTCCCACCCACCTCTAGGGCAGCATGCAAGACAGAGTTTAACAACTaGGCCTCACTACCCCCGTTC | + |
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Preference number: 2 (lower is better) Translates to: WYKEPLAHLPPTSRAACKTEFNN*ASLPPF Trigger: GAACGGGGGTAGTGAGGCCCAGTTGTTAAACTCTGT...CTTGCATGCTGCCCTAGAGGTGGGTGGGAGGTGAGCTAGGGGCTCCTTGTACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGAAGGGTGGATATGGAGGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCAGAGAAGGGTGGATATaGAGGCAGAGCTCCCAATGG | + |
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Preference number: 2 (lower is better) Translates to: GEKGGYGGRAPNGLEPAGREGWI*RQSSQW Trigger: CCATTGGGAGCTCTGCCTCCATATCCACCCTTCTCT...GCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCCTCCATATCCACCCTTCTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR CAA 90 bp | CTCAGGGAGAGAAGGGTGGATATGGAGGCAGAGCTCCCAATGGCCTaGAACCAGCTGGCTTCAGTTCCTGGCAGCCTAGGTACATTAAGG | + |
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Preference number: 2 (lower is better) Translates to: LRERRVDMEAELPMA*NQLASVPGSLGTLR Trigger: CCTTAATGTACCTAGGCTGCCAGGAACTGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCCTCCATATCCACCCTTCTCTCCCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCTTCAGTTCCTGGCAGCCTAGGTGCAAGGCTTTCATGTaGATGTGCAAGGGTGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: GRAPNGLEPAGFSSWQPRCKAFM*MCKGGN Trigger: ATTCCCACCCTTGCACATTCACATGAAAGCCTTGCA...CCTAGGCTGCCAGGAACTGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAATGGCCTTGAACCAGCTGGCTTCAGTTCCTGGCAGCCTAGGTACATTAAGCCCACCCTCAGTGGATaGTGGCTATGCTGGCCACTT | + |
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Preference number: 2 (lower is better) Translates to: PNGLEPAGFSSWQPRYIKPTLSG*WLCWPL Trigger: AAGTGGCCAGCATAGCCACCATCCACTGAGGGTGGG...CTTAATGTACCTAGGCTGCCAGGAACTGAAGCCAGCTGGTTCAAGGCCATTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CCA 90 bp | ACTACCCCCGTTCCTGTGGGGGAGCCCTCAGTAATACCAGCATCCTTGGAATGGCAGAAGCTAGACCAGTaGGTGCTGATGAGGCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: TTPVPVGEPSVIPASLEWQKLDQ*VLMRQS Trigger: ACTCTGCCTCATCAGCACCCACTGGTCTAGCTTCTG...CCATTCCAAGGATGCTGGTATTACTGAGGGCTCCCCCACAGGAACGGGGGTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGAGGACCTGTTGAGGGGGCTCCGAATTCCATACAGACACATACACACAGACGGAGACCCCAGTCACTaGAGGACAAACGCTTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: MEDLLRGLRIPYRHIHTDGDPSH*RTNAWA Trigger: AGCCCAAGCGTTTGTCCTCCAGTGACTGGGGTCTCC...GTCTGTGTGTATGTGTCTGTATGGAATTCGGAGCCCCCTCAACAGGTCCTCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CCA 90 bp | CACTACCCCCGTTCCTGTGGGGGAGCCCTCAGTAATACCAGCATCCTTGGAATGAGACACAGATGTGAATaGGGCCATGACAAATGGTAC | + |
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Preference number: 2 (lower is better) Translates to: HYPRSCGGALSNTSILGMRHRCE*GHDKWY Trigger: GTACCATTTGTCATGGCCCCATTCACATCTGTGTCT...CATTCCAAGGATGCTGGTATTACTGAGGGCTCCCCCACAGGAACGGGGGTAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CCA 90 bp | GGATATGGAGGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCTTCAGTTCCTGGCCAGCATCCTTGGAATaGAATGGAAAGACACAGATG | + |
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Preference number: 2 (lower is better) Translates to: GYGGRAPNGLEPAGFSSWPASLE*NGKTQM Trigger: CATCTGTGTCTTTCCATTCCATTCCAAGGATGCTGG...CCAGGAACTGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCCTCCATATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR TCA 90 bp | AGACCAGTGGGTGCTGATGAGGCAGAGTGGGCACACTATGCCATATATTGGAGCTGCAAGGCTTTCATGTaGATGTGCAAGGGTGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: RPVGADEAEWAHYAIYWSCKAFM*MCKGGN Trigger: ATTCCCACCCTTGCACATTCACATGAAAGCCTTGCA...GCTCCAATATATGGCATAGTGTGCCCACTCTGCCTCATCAGCACCCACTGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGGTGGATATGGAGGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCTTCAAGACACAGATGTGAATaGGGCCATGACAAATGGTAC | + |
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Preference number: 2 (lower is better) Translates to: RRVDMEAELPMALNQLASRHRCE*GHDKWY Trigger: GTACCATTTGTCATGGCCCCATTCACATCTGTGTCT...TGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCCTCCATATCCACCCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGAAGGGTGGATATGGAGGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCATCCTTGGAATGGAATaGAAAGACACAGATGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: GEKGGYGGRAPNGLEPAGILGME*KDTDVN Trigger: ATTCACATCTGTGTCTTTCCATTCCATTCCAAGGAT...GCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCCTCCATATCCACCCTTCTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR CCA 72 bp | CAGGGTTGCCCCACCCTCAGTGGATGGTGGCTATGCTaGCCACTTGGCCTCCTGCTTGGCAGCACCCCAACA | + |
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Preference number: 3 (lower is better) Translates to: QGCPTLSGWWLC*PLGLLLGSTPT Trigger: TGTTGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTGAGGGTGGGGCAACCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR CCA 72 bp | CCAATTCCCCAGGGTTGCCCCACCCTCAGTGGATGGTaGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: PIPQGCPTLSGW*LCWPLGLLLGS Trigger: GCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTGAGGGTGGGGCAACCCTGGGGAATTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGAGAAGGGTGGATATGGAGGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCGGCTATGCTGGCCACTaGGCCTCCTGCTTGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: GEKGGYGGRAPNGLEPAGGYAGH*ASCLAA Trigger: TGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCC...GCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCCTCCATATCCACCCTTCTCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CAA 90 bp | ATGTGCAAGGGTGGGAATGGGAGACCCCAGTCACTGGAGGACAAACGCTTGGGCCCCAATTCCCCAGGGTaGCCCCACCCTCAGTGGATG | + |
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Preference number: 3 (lower is better) Translates to: MCKGGNGRPQSLEDKRLGPNSPG*PHPQWM Trigger: CATCCACTGAGGGTGGGGCAACCCTGGGGAATTGGG...GCCCAAGCGTTTGTCCTCCAGTGACTGGGGTCTCCCATTCCCACCCTTGCACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CAA 90 bp | ACTACCCCCGTTCCTGTGGGGGAGCCCTCAGTAATACCAGCATCCTTGGAATGGGGCTATGCTGGCCACTaGGCCTCCTGCTTGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: TTPVPVGEPSVIPASLEWGYAGH*ASCLAA Trigger: TGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCC...CCATTCCAAGGATGCTGGTATTACTGAGGGCTCCCCCACAGGAACGGGGGTAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CAA 90 bp | GGTGAGTGTGCAAGGCTTTCATGTGAATGTGCAAGGGTGGGAATGGGAGACCCCGGCTATGCTGGCCACTaGGCCTCCTGCTTGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: GECARLSCECARVGMGDPGYAGH*ASCLAA Trigger: TGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCC...GGGGTCTCCCATTCCCACCCTTGCACATTCACATGAAAGCCTTGCACACTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR-3UTR CAA 90 bp | TGGGAGATGGAGGACCTGTTGAGGGGGCTCCGAATTCCATACAGACACATACACCACTTGGCCTCCTGCTaGGCAGCACCCCAACATGGG | + |
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Preference number: 3 (lower is better) Translates to: WEMEDLLRGLRIPYRHIHHLASC*AAPQHG Trigger: CCCATGTTGGGGTGCTGCCAAGCAGGAGGCCAAGTG...GTGTATGTGTCTGTATGGAATTCGGAGCCCCCTCAACAGGTCCTCCATCTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR CCA 72 bp | CAGCCTAGGTACATTAAGGGAGGCCTTAGGGGAGGGTaGGAGATGGAGGACCTGTTGAGGGGGCTCCGAATT | + |
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Preference number: 3 (lower is better) Translates to: QPRYIKGGLRGG*EMEDLLRGLRI Trigger: AATTCGGAGCCCCCTCAACAGGTCCTCCATCTCCCACCCTCCCCTAAGGCCTCCCTTAATGTACCTAGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR CCA 72 bp | TTGGGAGGCCCAGGAACCAGGTCAGGAAGGGTGTCATaGACTGCATTAGGGAAGACCACCCACCCAGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: LGGPGTRSGRVS*TALGKTTHPGK Trigger: CTTTCCTGGGTGGGTGGTCTTCCCTAATGCAGTCCATGACACCCTTCCTGACCTGGTTCCTGGGCCTCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162000.4 |
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| 3UTR CCA 72 bp | CCCAAACCCAGACTTCTGATGACAGAGTTTAACAACTaGGCCTCACTACCCCCGTTCCTGTGGGGGAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: PKPRLLMTEFNN*ASLPPFLWGSP Trigger: AGGGCTCCCCCACAGGAACGGGGGTAGTGAGGCCCAGTTGTTAAACTCTGTCATCAGAAGTCTGGGTTTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR CCA 72 bp | GCTCCCAATGGCCTTGAACCAGCTGGCTTCAGTTCCTaGCAGCCTAGGTACATTAAGGGAGGCCTTAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: APNGLEPAGFSS*QPRYIKGGLRG Trigger: TCCCCTAAGGCCTCCCTTAATGTACCTAGGCTGCCAGGAACTGAAGCCAGCTGGTTCAAGGCCATTGGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| 3UTR GCA 72 bp | AGGCCCAGGAACCAGGTCAGGAAGGGTGTCATGGACTaGATTAGGGAAGACCACCCACCCAGGAAAGATAAC | + |
|
Preference number: 3 (lower is better) Translates to: RPRNQVRKGVMD*IREDHPPRKDN Trigger: GTTATCTTTCCTGGGTGGGTGGTCTTCCCTAATGCAGTCCATGACACCCTTCCTGACCTGGTTCCTGGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162000.4 |
||
| 3UTR CCA 72 bp | GTGCAAGGCTTTCATGTGAATGTGCAAGGGTGGGAATaGGAGACCCCAGTCACTGGAGGACAAACGCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VQGFHVNVQGWE*ETPVTGGQTLG Trigger: CCCAAGCGTTTGTCCTCCAGTGACTGGGGTCTCCCATTCCCACCCTTGCACATTCACATGAAAGCCTTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| 3UTR TCA 72 bp | TGCATTAGGGAAGACCACCCACCCAGGAAAGATAACTaGAGGTCTAGAGGTTCCCTCCTCACCCTCCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: CIREDHPPRKDN*RSRGSLLTLPS Trigger: GGATGGGAGGGTGAGGAGGGAACCTCTAGACCTTCAGTTATCTTTCCTGGGTGGGTGGTCTTCCCTAATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162000.4 |
||
| 3UTR CCA 72 bp | ATGGAAAGACACAGATGTGAATGGGGCCATGACAAATaGTACAAGGAGCCCCTAGCTCACCTCCCACCCACC | + |
|
Preference number: 3 (lower is better) Translates to: MERHRCEWGHDK*YKEPLAHLPPT Trigger: GGTGGGTGGGAGGTGAGCTAGGGGCTCCTTGTACCATTTGTCATGGCCCCATTCACATCTGTGTCTTTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCTTCAGTTCCTGGCAGCCTAGGGTAATACCAGCATCCTaGGAATGGAATGGAAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: GRAPNGLEPAGFSSWQPRVIPAS*EWNGKT Trigger: TGTCTTTCCATTCCATTCCAAGGATGCTGGTATTAC...CCTAGGCTGCCAGGAACTGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| 3UTR TCA 72 bp | GCCATATATTGGAGCCAGAAATGCTCGTGCCCAGTCTaGGATGGGCACAGAGAATGTAAAGGGGGCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: AIYWSQKCSCPV*DGHRECKGGRT Trigger: TGTCCTGCCCCCTTTACATTCTCTGTGCCCATCTCAGACTGGGCACGAGCATTTCTGGCTCCAATATATGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| 3UTR CCA 72 bp | ACAGAAGCTAGACCAGTGGGTGCTGATGAGGCAGAGTaGGCACACTATGCCATATATTGGAGCCAGAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: TEARPVGADEAE*AHYAIYWSQKC Trigger: GCATTTCTGGCTCCAATATATGGCATAGTGTGCCCACTCTGCCTCATCAGCACCCACTGGTCTAGCTTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAGGCACCTTGCTGCCCTaGGGGCCTGCGCCGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSGWWLCWPLGLLLGSTPGTLLP*GPAPLL Trigger: CAGAAGCGGCGCAGGCCCTCAGGGCAGCAAGGTGCC...TGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR GCA 90 bp | TCCCCAGGGTTGCCCCACCCTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCTGCTGCCCTGAGGGCCTaGGCCGCTTCTGGCTACGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGLPHPQWMVAMLATWPAALRA*AASGYG Trigger: ACCGTAGCCAGAAGCGGCGCAGGCCCTCAGGGCAGC...AGGCCAAGTGGCCAGCATAGCCACCATCCACTGAGGGTGGGGCAACCCTGGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCACTCAGGGCACCTTGCTaGCCTGAGGGCCTGCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSGWWLCWPLGLLLGSTPLRAPC*PEGLRR Trigger: GCGGCGCAGGCCCTCAGGGCAGCAAGGTGCCCTGAG...TGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAACCTCAGGGCACCTTGCTaGCCTGAGGGCCTGCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QWMVAMLATWPPAWQHPNLRAPC*PEGLRR Trigger: GCGGCGCAGGCCCTCAGGGCAGCAAGGTGCCCTGAG...GTTGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAACGCGGGCTGGGGCTGGTaGGGATCGATGGGAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QWMVAMLATWPPAWQHPNAGWGW*GSMGGA Trigger: GGCTCCTCCCATCGATCCCCACCAGCCCCAGCCCGC...GTTGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAGGAGCCCCCTTAGGCTaGGGCATCCCAGGCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSGWWLCWPLGLLLGSTPGAPLG*GIPGRG Trigger: ACCCCGGCCTGGGATGCCCCAGCCTAAGGGGGCTCC...TGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAACGGAGCCCCCTTAGGCTaGGGCATCCCAGGCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QWMVAMLATWPPAWQHPNGAPLG*GIPGRG Trigger: ACCCCGGCCTGGGATGCCCCAGCCTAAGGGGGCTCC...GTTGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCTTCAGTTCCTGGCAGCCTAGGGGCACCTTGCTGCCCTaGGGGCCTGCGCCGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRAPNGLEPAGFSSWQPRGTLLP*GPAPLL Trigger: CAGAAGCGGCGCAGGCCCTCAGGGCAGCAAGGTGCC...CCTAGGCTGCCAGGAACTGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR GCA 90 bp | GGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAACATGGGCTGCCCTGAGGGCCTaGGCCGCTTCTGGCTACGGT | + |
|
Preference number: 4 (lower is better) Translates to: GWWLCWPLGLLLGSTPTWAALRA*AASGYG Trigger: ACCGTAGCCAGAAGCGGCGCAGGCCCTCAGGGCAGC...CCATGTTGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR GCA 90 bp | CACCCTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACGCTGCCCTGAGGGCCTaGGCCGCTTCTGGCTACGGT | + |
|
Preference number: 4 (lower is better) Translates to: HPQWMVAMLATWPPAWQHAALRA*AASGYG Trigger: ACCGTAGCCAGAAGCGGCGCAGGCCCTCAGGGCAGC...GTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTGAGGGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | CCAATTCCCCAGGGTTGCCCCACCCTCAGTGGATGGTGGCTATGCTGGCCACTTGCGGGCTGGGGCTGGTaGGGATCGATGGGAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PIPQGCPTLSGWWLCWPLAGWGW*GSMGGA Trigger: GGCTCCTCCCATCGATCCCCACCAGCCCCAGCCCGC...AAGTGGCCAGCATAGCCACCATCCACTGAGGGTGGGGCAACCCTGGGGAATTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCACACAACCTGCCGACGTaGTCTTGGGACCCGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSGWWLCWPLGLLLGSTPHNLPT*SWDPWG Trigger: TCCCCACGGGTCCCAAGATCACGTCGGCAGGTTGTG...TGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR TCA 90 bp | GCCCATGGGATTAGTGAGTGTCCCAGGTTGTGTGCAAGGACAGGAGCTAGGAGCGGCACCTTGCTGCCCTaGGGGCCTGCGCCGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AHGISECPRLCARTGARSGTLLP*GPAPLL Trigger: CAGAAGCGGCGCAGGCCCTCAGGGCAGCAAGGTGCC...GCTCCTAGCTCCTGTCCTTGCACACAACCTGGGACACTCACTAATCCCATGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR GCA 90 bp | AGGGTTGCCCCACCCTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCGTGCCTGGCACAACCTaGCGACGTGATCTTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RVAPPSVDGGYAGHLASCVPGTT*RRDLGT Trigger: GGTCCCAAGATCACGTCGGCAGGTTGTGCCAGGCAC...GCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTGAGGGTGGGGCAACCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGCAAGGGTGGGAATGGGAGACCCCAGTCACTGGAGGACAAACGCTTGGGCGCTGCCCTGAGGGCCTaGGCCGCTTCTGGCTACGGT | + |
|
Preference number: 4 (lower is better) Translates to: MCKGGNGRPQSLEDKRLGAALRA*AASGYG Trigger: ACCGTAGCCAGAAGCGGCGCAGGCCCTCAGGGCAGC...GCCCAAGCGTTTGTCCTCCAGTGACTGGGGTCTCCCATTCCCACCCTTGCACAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | CACTACCCCCGTTCCTGTGGGGGAGCCCTCAGTAATACCAGCATCCTTGGAATGGGAGCCCCCTTAGGCTaGGGCATCCCAGGCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HYPRSCGGALSNTSILGMGAPLG*GIPGRG Trigger: ACCCCGGCCTGGGATGCCCCAGCCTAAGGGGGCTCC...CATTCCAAGGATGCTGGTATTACTGAGGGCTCCCCCACAGGAACGGGGGTAGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCACCCTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGTTCAACTGGAAGGCTaGAGCCCCCTTAGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: APPSVDGGYAGHLASCLAVQLEG*SPLRLG Trigger: CCCCAGCCTAAGGGGGCTCCAGCCTTCCAGTTGAAC...TGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTGAGGGTGGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR TCA 90 bp | TGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAACATGCACAACCTGCCGACGTaGTCTTGGGACCCGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WMVAMLATWPPAWQHPNMHNLPT*SWDPWG Trigger: TCCCCACGGGTCCCAAGATCACGTCGGCAGGTTGTG...CATGTTGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTTGCCCCACCCTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCGCAGAAATCCAGGATTaGCCGAGTTGGGGTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RVAPPSVDGGYAGHLASCAEIQD*PSWGPL Trigger: GAGGGGACCCCAACTCGGTCAATCCTGGATTTCTGC...GCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTGAGGGTGGGGCAACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGTGGATATGGAGGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCTTCAGGCACCTTGCTGCCCTaGGGGCCTGCGCCGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRVDMEAELPMALNQLASGTLLP*GPAPLL Trigger: CAGAAGCGGCGCAGGCCCTCAGGGCAGCAAGGTGCC...TGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCCTCCATATCCACCCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR GCA 90 bp | TGTGAATGTGCAAGGGTGGGAATGGGAGACCCCAGTCACTGGAGGACAAACGCTCTCAGGGCACCTTGCTaGCCTGAGGGCCTGCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CECARVGMGDPSHWRTNALRAPC*PEGLRR Trigger: GCGGCGCAGGCCCTCAGGGCAGCAAGGTGCCCTGAG...AGCGTTTGTCCTCCAGTGACTGGGGTCTCCCATTCCCACCCTTGCACATTCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR TCA 90 bp | GACAGCCAGGACCGACAAAACAAGGGACTTGGGAGGGAAGGGAGGACATGGGAGCACAACCTGCCGACGTaGTCTTGGGACCCGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSQDRQNKGLGREGRTWEHNLPT*SWDPWG Trigger: TCCCCACGGGTCCCAAGATCACGTCGGCAGGTTGTG...CTCCCATGTCCTCCCTTCCCTCCCAAGTCCCTTGTTTTGTCGGTCCTGGCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR GCA 90 bp | GCCCCCTTGGGAGGCCCAGGAACCAGGTCAGGAAGGGTGTCATGGACTGCATTAGTGCCTGGCACAACCTaGCGACGTGATCTTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: APLGGPGTRSGRVSWTALVPGTT*RRDLGT Trigger: GGTCCCAAGATCACGTCGGCAGGTTGTGCCAGGCAC...TAATGCAGTCCATGACACCCTTCCTGACCTGGTTCCTGGGCCTCCCAAGGGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162000.4 |
||
| CDS-3UTR CCA 90 bp | TGGGAGATGGAGGACCTGTTGAGGGGGCTCCGAATTCCATACAGACACATACACGGAGCCCCCTTAGGCTaGGGCATCCCAGGCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WEMEDLLRGLRIPYRHIHGAPLG*GIPGRG Trigger: ACCCCGGCCTGGGATGCCCCAGCCTAAGGGGGCTCC...GTGTATGTGTCTGTATGGAATTCGGAGCCCCCTCAACAGGTCCTCCATCTCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTTGCCCCACCCTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCGGAATCCGGTTCAACTaGAAGGCTGGAGCCCCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RVAPPSVDGGYAGHLASCGIRFN*KAGAPL Trigger: TAAGGGGGCTCCAGCCTTCCAGTTGAACCGGATTCC...GCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTGAGGGTGGGGCAACCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162170.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCTTCAGTTCCTGGCAGCCTAGGGCAGAAATCCAGGATTaGCCGAGTTGGGGTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRAPNGLEPAGFSSWQPRAEIQD*PSWGPL Trigger: GAGGGGACCCCAACTCGGTCAATCCTGGATTTCTGC...CCTAGGCTGCCAGGAACTGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGCAAGGGTGGGAATGGGAGACCCCAGTCACTGGAGGACAAACGCTTGGGCGTGCCTGGCACAACCTaGCGACGTGATCTTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: MCKGGNGRPQSLEDKRLGVPGTT*RRDLGT Trigger: GGTCCCAAGATCACGTCGGCAGGTTGTGCCAGGCAC...GCCCAAGCGTTTGTCCTCCAGTGACTGGGGTCTCCCATTCCCACCCTTGCACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAACCAGCCCATGTGGGGCTaGAAAACCATAGTCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QWMVAMLATWPPAWQHPNQPMWG*KTIVQR Trigger: CCTCTGGACTATGGTTTTGCAGCCCCACATGGGCTG...GTTGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR GCA 90 bp | ATTCCCCAGGGTTGCCCCACCCTCAGTGGATGGTGGCTATGCTGGCCACTTGGCGAGTCTGAGTTAGGGTaGGGAGTAGCCAGCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: IPQGCPTLSGWWLCWPLGESELG*GVASPC Trigger: ACATGGGCTGGCTACTCCGCACCCTAACTCAGACTC...GCCAAGTGGCCAGCATAGCCACCATCCACTGAGGGTGGGGCAACCCTGGGGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | TGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAACATGGGACAGCAACAGCAGTaGCCAGAGAGGGAGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WMVAMLATWPPAWQHPNMGQQQQ*PEREEL Trigger: CAACTCCTCCCTCTCTGGCCACTGCTGTTGCTGTCC...CATGTTGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAACATGGGGGAGTAGCCAGCCCATGTaGGGCTGCAAAACCATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WWLCWPLGLLLGSTPTWGSSQPM*GCKTIV Trigger: GACTATGGTTTTGCAGCCCCACATGGGCTGGCTACT...CCCCCATGTTGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | CCTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAGACAGGTCTGTCAGTaGTTGCTGACTCTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQWMVAMLATWPPAWQHPRQVCQ*LLTLLL Trigger: CAGGAGGAGAGTCAGCAACCACTGACAGACCTGTCT...GGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGCAAGGGTGGGAATGGGAGACCCCAGTCACTGGAGGACAAACGCTTGGGCGTTCAACTGGAAGGCTaGAGCCCCCTTAGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MCKGGNGRPQSLEDKRLGVQLEG*SPLRLG Trigger: CCCCAGCCTAAGGGGGCTCCAGCCTTCCAGTTGAAC...GCCCAAGCGTTTGTCCTCCAGTGACTGGGGTCTCCCATTCCCACCCTTGCACAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAACATGGGGGGAATCCGGTTCAACTaGAAGGCTGGAGCCCCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: MVAMLATWPPAWQHPNMGGIRFN*KAGAPL Trigger: TAAGGGGGCTCCAGCCTTCCAGTTGAACCGGATTCC...CCCCATGTTGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCAT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162170.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGTGGATATGGAGGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCTTCACACAACCTGCCGACGTaGTCTTGGGACCCGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRVDMEAELPMALNQLASHNLPT*SWDPWG Trigger: TCCCCACGGGTCCCAAGATCACGTCGGCAGGTTGTG...TGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCCTCCATATCCACCCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCTTCAGTTCCTGGCAGCCTAGGGAGTCTGAGTTAGGGTaGGGAGTAGCCAGCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GRAPNGLEPAGFSSWQPRESELG*GVASPC Trigger: ACATGGGCTGGCTACTCCGCACCCTAACTCAGACTC...CCTAGGCTGCCAGGAACTGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | GGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAACATGGAGACAGGTCTGTCAGTaGTTGCTGACTCTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GWWLCWPLGLLLGSTPTWRQVCQ*LLTLLL Trigger: CAGGAGGAGAGTCAGCAACCACTGACAGACCTGTCT...CCATGTTGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR TCA 90 bp | CATGGGATTAGTGAGTGTCCCAGGTTGTGTGCAAGGACAGGAGCTAGGAGCCCCGCAGAAATCCAGGATTaGCCGAGTTGGGGTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HGISECPRLCARTGARSPAEIQD*PSWGPL Trigger: GAGGGGACCCCAACTCGGTCAATCCTGGATTTCTGC...GGGGCTCCTAGCTCCTGTCCTTGCACACAACCTGGGACACTCACTAATCCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTGAACCAGCTGGCTTCAGTTCCTGGCAGCCTAGGTACATTAAGGGAGGCCGGACAGCAACAGCAGTaGCCAGAGAGGGAGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALNQLASVPGSLGTLREAGQQQQ*PEREEL Trigger: CAACTCCTCCCTCTCTGGCCACTGCTGTTGCTGTCC...GGCCTCCCTTAATGTACCTAGGCTGCCAGGAACTGAAGCCAGCTGGTTCAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | TGTGAATGTGCAAGGGTGGGAATGGGAGACCCCAGTCACTGGAGGACAAACGCTGTTCAACTGGAAGGCTaGAGCCCCCTTAGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CECARVGMGDPSHWRTNAVQLEG*SPLRLG Trigger: CCCCAGCCTAAGGGGGCTCCAGCCTTCCAGTTGAAC...AGCGTTTGTCCTCCAGTGACTGGGGTCTCCCATTCCCACCCTTGCACATTCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| 3UTR CAA 72 bp | GGAGGCCTTAGGGGAGGGTGGGAGATGGAGGACCTGTaGAGGGGGCTCCGAATTCCATACAGACACATACAC | + |
|
Preference number: 4 (lower is better) Translates to: GGLRGGWEMEDL*RGLRIPYRHIH Trigger: GTGTATGTGTCTGTATGGAATTCGGAGCCCCCTCAACAGGTCCTCCATCTCCCACCCTCCCCTAAGGCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTGAGTGTGCAAGGCTTTCATGTGAATGTGCAAGGGTGGGAATGGGAGACCGTGCCTGGCACAACCTaGCGACGTGATCTTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: WVSVQGFHVNVQGWEWETVPGTT*RRDLGT Trigger: GGTCCCAAGATCACGTCGGCAGGTTGTGCCAGGCAC...GGTCTCCCATTCCCACCCTTGCACATTCACATGAAAGCCTTGCACACTCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGGCTTTCATGTGAATGTGCAAGGGTGGGAATGGGAGACCCCAGTCACTGGGGACAGCAACAGCAGTaGCCAGAGAGGGAGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ARLSCECARVGMGDPSHWGQQQQ*PEREEL Trigger: CAACTCCTCCCTCTCTGGCCACTGCTGTTGCTGTCC...CCAGTGACTGGGGTCTCCCATTCCCACCCTTGCACATTCACATGAAAGCCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCTTCAGTTCCTGGCAGCCTAGGTACATTAAGGGAGGCCTTAGGGGAGGGAGTAGCCAGCCCATGTaGGGCTGCAAAACCATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AGFSSWQPRYIKGGLRGGSSQPM*GCKTIV Trigger: GACTATGGTTTTGCAGCCCCACATGGGCTGGCTACT...CCCTCCCCTAAGGCCTCCCTTAATGTACCTAGGCTGCCAGGAACTGAAGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTGAGTGTGCAAGGCTTTCATGTGAATGTGCAAGGGTGGGAATGGGAGACCGTTCAACTGGAAGGCTaGAGCCCCCTTAGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WVSVQGFHVNVQGWEWETVQLEG*SPLRLG Trigger: CCCCAGCCTAAGGGGGCTCCAGCCTTCCAGTTGAAC...GGTCTCCCATTCCCACCCTTGCACATTCACATGAAAGCCTTGCACACTCACCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| 3UTR CAA 72 bp | AGAAGGGTGGATATGGAGGCAGAGCTCCCAATGGCCTaGAACCAGCTGGCTTCAGTTCCTGGCAGCCTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRVDMEAELPMA*NQLASVPGSLG Trigger: ACCTAGGCTGCCAGGAACTGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCCTCCATATCCACCCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGTGGATATGGAGGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCTTCACCAAGGGTACTGAGATaGGGGAGGCCCCTCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RRVDMEAELPMALNQLASPRVLR*GRPLFK Trigger: TTTGAAGAGGGGCCTCCCTCATCTCAGTACCCTTGG...TGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCCTCCATATCCACCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | GCCCATGGGATTAGTGAGTGTCCCAGGTTGTGTGCAAGGACAGGAGCTAGGAGCAGTAGCCAGCCCATGTaGGGCTGCAAAACCATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AHGISECPRLCARTGARSSSQPM*GCKTIV Trigger: GACTATGGTTTTGCAGCCCCACATGGGCTGGCTACT...GCTCCTAGCTCCTGTCCTTGCACACAACCTGGGACACTCACTAATCCCATGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | GGTGAGTGTGCAAGGCTTTCATGTGAATGTGCAAGGGTGGGAATGGGAGACCCCGGAATCCGGTTCAACTaGAAGGCTGGAGCCCCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GECARLSCECARVGMGDPGIRFN*KAGAPL Trigger: TAAGGGGGCTCCAGCCTTCCAGTTGAACCGGATTCC...GGGGTCTCCCATTCCCACCCTTGCACATTCACATGAAAGCCTTGCACACTCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032479.11 ENSMUST00000162170.8 |
||
| CDS-3UTR GCA 90 bp | CCCAATGGCCTTGAACCAGCTGGCTTCAGTTCCTGGCAGCCTAGGTACATTAAGGAGTCTGAGTTAGGGTaGGGAGTAGCCAGCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PNGLEPAGFSSWQPRYIKESELG*GVASPC Trigger: ACATGGGCTGGCTACTCCGCACCCTAACTCAGACTC...CTTAATGTACCTAGGCTGCCAGGAACTGAAGCCAGCTGGTTCAAGGCCATTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGTGGATATGGAGGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCTTCAAGTAGCCAGCCCATGTaGGGCTGCAAAACCATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRVDMEAELPMALNQLASSSQPM*GCKTIV Trigger: GACTATGGTTTTGCAGCCCCACATGGGCTGGCTACT...TGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCCTCCATATCCACCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | GAGATGGGCACAGAGAATGTAAAGGGGGCAGGACATAGGCAACACGAGGGAGAGAGACAGGTCTGTCAGTaGTTGCTGACTCTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EMGTENVKGAGHRQHEGERQVCQ*LLTLLL Trigger: CAGGAGGAGAGTCAGCAACCACTGACAGACCTGTCT...CTCTCCCTCGTGTTGCCTATGTCCTGCCCCCTTTACATTCTCTGTGCCCATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGTGGATATGGAGGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCTTCAAGACAGGTCTGTCAGTaGTTGCTGACTCTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRVDMEAELPMALNQLASRQVCQ*LLTLLL Trigger: CAGGAGGAGAGTCAGCAACCACTGACAGACCTGTCT...TGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCCTCCATATCCACCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR GCA 90 bp | ATGGAGGACCTGTTGAGGGGGCTCCGAATTCCATACAGACACATACACACAGACGAGTCTGAGTTAGGGTaGGGAGTAGCCAGCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: MEDLLRGLRIPYRHIHTDESELG*GVASPC Trigger: ACATGGGCTGGCTACTCCGCACCCTAACTCAGACTC...GTCTGTGTGTATGTGTCTGTATGGAATTCGGAGCCCCCTCAACAGGTCCTCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CAA 90 bp | CACCCTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCTGCCGACGTGATCTaGGGACCCGTGGGGATCGGC | + |
|
Preference number: 5 (lower is better) Translates to: HPQWMVAMLATWPPAWQHPADVI*GPVGIG Trigger: GCCGATCCCCACGGGTCCCAAGATCACGTCGGCAGG...GTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTGAGGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| CDS-3UTR CAA 90 bp | TTGCCCCACCCTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCCTGCCGACGTGATCTaGGGACCCGTGGGGATCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPHPQWMVAMLATWPPAWPADVI*GPVGIG Trigger: GCCGATCCCCACGGGTCCCAAGATCACGTCGGCAGG...CCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTGAGGGTGGGGCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| CDS-3UTR CAA 90 bp | CATGGGATTAGTGAGTGTCCCAGGTTGTGTGCAAGGACAGGAGCTAGGAGCCCCCCTGCCGACGTGATCTaGGGACCCGTGGGGATCGGC | + |
|
Preference number: 5 (lower is better) Translates to: HGISECPRLCARTGARSPPADVI*GPVGIG Trigger: GCCGATCCCCACGGGTCCCAAGATCACGTCGGCAGG...GGGGCTCCTAGCTCCTGTCCTTGCACACAACCTGGGACACTCACTAATCCCATG 62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| CDS-3UTR CAA 90 bp | TGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAACATGGGGGCGGTCCCAGCAGAACTaGAAGATGATGCCGGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WWLCWPLGLLLGSTPTWGRSQQN*KMMPVA Trigger: GGCTACCGGCATCATCTTCAAGTTCTGCTGGGACCG...CCCCCATGTTGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| CDS-3UTR CAA 90 bp | CCCCACCCTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCGGTCCCAGCAGAACTaGAAGATGATGCCGGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PHPQWMVAMLATWPPAWQRSQQN*KMMPVA Trigger: GGCTACCGGCATCATCTTCAAGTTCTGCTGGGACCG...CTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTGAGGGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| CDS-3UTR CAA 90 bp | TCCCCAGGGTTGCCCCACCCTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCAGGTCTGTCAGTGGTaGCTGACTCTCCTCCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPGLPHPQWMVAMLATWPQVCQW*LTLLLP Trigger: AGGCAGGAGGAGAGTCAGCAACCACTGACAGACCTG...AGGCCAAGTGGCCAGCATAGCCACCATCCACTGAGGGTGGGGCAACCCTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| CDS-3UTR CAA 90 bp | TGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAACATGGGGGCAGGTCTGTCAGTGGTaGCTGACTCTCCTCCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: WWLCWPLGLLLGSTPTWGQVCQW*LTLLLP Trigger: AGGCAGGAGGAGAGTCAGCAACCACTGACAGACCTG...CCCCCATGTTGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| CDS-3UTR CAA 90 bp | CCCCACCCTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCAGGTCTGTCAGTGGTaGCTGACTCTCCTCCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PHPQWMVAMLATWPPAWQQVCQW*LTLLLP Trigger: AGGCAGGAGGAGAGTCAGCAACCACTGACAGACCTG...CTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTGAGGGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| CDS-3UTR CAA 90 bp | TGTGAATGTGCAAGGGTGGGAATGGGAGACCCCAGTCACTGGAGGACAAACGCTCCTGCCGACGTGATCTaGGGACCCGTGGGGATCGGC | + |
|
Preference number: 5 (lower is better) Translates to: CECARVGMGDPSHWRTNAPADVI*GPVGIG Trigger: GCCGATCCCCACGGGTCCCAAGATCACGTCGGCAGG...AGCGTTTGTCCTCCAGTGACTGGGGTCTCCCATTCCCACCCTTGCACATTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| CDS-3UTR CAA 90 bp | ATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAACATGGGGGGCAGAAATCCAGGATaGACCGAGTTGGGGTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: MVAMLATWPPAWQHPNMGGRNPG*TELGSP Trigger: AGGGGACCCCAACTCGGTCAATCCTGGATTTCTGCC...CCCCATGTTGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCAT 61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| CDS-3UTR CAA 90 bp | ATTCCCCAGGGTTGCCCCACCCTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCGGTCCCAGCAGAACTaGAAGATGATGCCGGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IPQGCPTLSGWWLCWPLGRSQQN*KMMPVA Trigger: GGCTACCGGCATCATCTTCAAGTTCTGCTGGGACCG...GCCAAGTGGCCAGCATAGCCACCATCCACTGAGGGTGGGGCAACCCTGGGGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| CDS-3UTR CAA 90 bp | CACCCTCAGTGGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCGGTCCCAGCAGAACTaGAAGATGATGCCGGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HPQWMVAMLATWPPAWQHRSQQN*KMMPVA Trigger: GGCTACCGGCATCATCTTCAAGTTCTGCTGGGACCG...GTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCCACTGAGGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| CDS-3UTR CAA 90 bp | GGATGGTGGCTATGCTGGCCACTTGGCCTCCTGCTTGGCAGCACCCCAACATGGCAGGTCTGTCAGTGGTaGCTGACTCTCCTCCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GWWLCWPLGLLLGSTPTWQVCQW*LTLLLP Trigger: AGGCAGGAGGAGAGTCAGCAACCACTGACAGACCTG...CCATGTTGGGGTGCTGCCAAGCAGGAGGCCAAGTGGCCAGCATAGCCACCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| CDS-3UTR CAA 90 bp | GCCCATGGGATTAGTGAGTGTCCCAGGTTGTGTGCAAGGACAGGAGCTAGGAGCCCAGGATTGACCGAGTaGGGGTCCCCTCCATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AHGISECPRLCARTGARSPGLTE*GSPPSS Trigger: GGAGGATGGAGGGGACCCCAACTCGGTCAATCCTGG...GCTCCTAGCTCCTGTCCTTGCACACAACCTGGGACACTCACTAATCCCATGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CAA 90 bp | GAGATGGGCACAGAGAATGTAAAGGGGGCAGGACATAGGCAACACGAGGGAGAGGGCAGAAATCCAGGATaGACCGAGTTGGGGTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: EMGTENVKGAGHRQHEGEGRNPG*TELGSP Trigger: AGGGGACCCCAACTCGGTCAATCCTGGATTTCTGCC...CTCTCCCTCGTGTTGCCTATGTCCTGCCCCCTTTACATTCTCTGTGCCCATCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGTGGATATGGAGGCAGAGCTCCCAATGGCCTTGAACCAGCTGGCTTCAGGCAGAAATCCAGGATaGACCGAGTTGGGGTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRVDMEAELPMALNQLASGRNPG*TELGSP Trigger: AGGGGACCCCAACTCGGTCAATCCTGGATTTCTGCC...TGAAGCCAGCTGGTTCAAGGCCATTGGGAGCTCTGCCTCCATATCCACCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS-3UTR CAA 90 bp | TGTGAATGTGCAAGGGTGGGAATGGGAGACCCCAGTCACTGGAGGACAAACGCTGGCAGAAATCCAGGATaGACCGAGTTGGGGTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CECARVGMGDPSHWRTNAGRNPG*TELGSP Trigger: AGGGGACCCCAACTCGGTCAATCCTGGATTTCTGCC...AGCGTTTGTCCTCCAGTGACTGGGGTCTCCCATTCCCACCCTTGCACATTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032479.11 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS CCA 72 bp | CGGCTTGGCGGAGGCGCCCGCTCCCAAACACACACATaGCGAGGGGCTGAGGGCCCACCCCGGACGCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RLGGGARSQTHT*RGAEGPPRTQG Trigger: CCCCTGCGTCCGGGGTGGGCCCTCAGCCCCTCGCCATGTGTGTGTTTGGGAGCGGGCGCCTCCGCCAAGCCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000032479.11 ENSMUST00000159391.8 ENSMUST00000160704.8 ENSMUST00000161292.2 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS CAA 72 bp | GAGGGGCAGTGCCTGGCACAACCTGCCGACGTGATCTaGGGACCCGTGGGGATCGGCTTGGCGGAGGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: EGQCLAQPADVI*GPVGIGLAEAP Trigger: GGGCGCCTCCGCCAAGCCGATCCCCACGGGTCCCAAGATCACGTCGGCAGGTTGTGCCAGGCACTGCCCCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032479.11 ENSMUST00000159391.8 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS CAA 90 bp | CTGGCACAACCTGCCGACGTGATCTTGGGACCCGTGGGGATCGGCTaGGCGGAGGCGCCCGCTCCCAAACACACACATGGCGAGGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LAQPADVILGPVGIG*AEAPAPKHTHGEGL Trigger: CAGCCCCTCGCCATGTGTGTGTTTGGGAGCGGGCGCCTCCGCCAAGCCGATCCCCACGGGTCCCAAGATCACGTCGGCAGGTTGTGCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032479.11 ENSMUST00000159391.8 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS TCA 72 bp | AGCAGGAGGGGCAGTGCCTGGCACAACCTGCCGACGTaGTCTTGGGACCCGTGGGGATCGGCTTGGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRRGSAWHNLPT*SWDPWGSAWRR Trigger: CCTCCGCCAAGCCGATCCCCACGGGTCCCAAGATCACGTCGGCAGGTTGTGCCAGGCACTGCCCCTCCTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032479.11 ENSMUST00000159391.8 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS CAA 72 bp | CCTGCCGACGTGATCTTGGGACCCGTGGGGATCGGCTaGGCGGAGGCGCCCGCTCCCAAACACACACATGGC | + |
|
Preference number: 6 (lower is better) Translates to: PADVILGPVGIG*AEAPAPKHTHG Trigger: GCCATGTGTGTGTTTGGGAGCGGGCGCCTCCGCCAAGCCGATCCCCACGGGTCCCAAGATCACGTCGGCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032479.11 ENSMUST00000159391.8 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
||
| CDS CCA 72 bp | AGGGCACCTTGCTGCCCTGAGGGCCTGCGCCGCTTCTaGCTACGGTCCCAGCAGAACTTGAAGATGATGCCG | + |
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Preference number: 6 (lower is better) Translates to: RAPCCPEGLRRF*LRSQQNLKMMP Trigger: CGGCATCATCTTCAAGTTCTGCTGGGACCGTAGCCAGAAGCGGCGCAGGCCCTCAGGGCAGCAAGGTGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032479.11 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| CDS TCA 72 bp | AAGGATGAGCCCGTCTCCGTCATCCCGCATGGAGTCTaGGTTAGGGTGCGGAGTAGCCAGCCCATGTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: KDEPVSVIPHGV*VRVRSSQPMWG Trigger: GCCCCACATGGGCTGGCTACTCCGCACCCTAACTCAGACTCCATGCGGGATGACGGAGACGGGCTCATCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032479.11 ENSMUST00000159391.8 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| CDS GCA 72 bp | CCGTCTCCGTCATCCCGCATGGAGTCTGAGTTAGGGTaGGGAGTAGCCAGCCCATGTGGGGCTGCAAAACCA | + |
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Preference number: 6 (lower is better) Translates to: PSPSSRMESELG*GVASPCGAAKP Trigger: TGGTTTTGCAGCCCCACATGGGCTGGCTACTCCGCACCCTAACTCAGACTCCATGCGGGATGACGGAGACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032479.11 ENSMUST00000159391.8 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| CDS TCA 72 bp | GATACTGTGGGACCCCACACTATAGCCCAAGGGTACTaGGATGAGGGAGGCCCCTCTTCAAAGCCTGATGGG | + |
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Preference number: 6 (lower is better) Translates to: DTVGPHTIAQGY*DEGGPSSKPDG Trigger: CCCATCAGGCTTTGAAGAGGGGCCTCCCTCATCTCAGTACCCTTGGGCTATAGTGTGGGGTCCCACAGTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032479.11 ENSMUST00000159391.8 ENSMUST00000160704.8 ENSMUST00000162000.4 ENSMUST00000162170.8 |
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| CDS CAA 72 bp | TCCCAATTTTCTTCCTCCTGGACAGAAGCCCAGAACTaGAAGATGATGCCGGTAGCCACAAGAACGATGATG | + |
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Preference number: 6 (lower is better) Translates to: SQFSSSWTEAQN*KMMPVATRTMM Trigger: CATCATCGTTCTTGTGGCTACCGGCATCATCTTCAAGTTCTGGGCTTCTGTCCAGGAGGAAGAAAATTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160666.2 |
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| CDS CAA 90 bp | AAAGAAAGCTCCCAATTTTCTTCCTCCTGGACAGAAGCCCAGAACTaGAAGATGATGCCGGTAGCCACAAGAACGATGATGATGGATATG | + |
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Preference number: 6 (lower is better) Translates to: KESSQFSSSWTEAQN*KMMPVATRTMMMDM Trigger: CATATCCATCATCATCGTTCTTGTGGCTACCGGCATCATCTTCAAGTTCTGGGCTTCTGTCCAGGAGGAAGAAAATTGGGAGCTTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160666.2 |
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