Pregenerated sensors for PI4K2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029186Ensembl transcript IDs: ENSMUST00000031081.11, ENSMUST00000031082.8, ENSMUST00000131526.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTCCAGTCAGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTaGGTCAGAAGAGGTAGGAGGACGAGTTTCCAACTGACTCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: TPVRLPLSQTPANGR*VRRGRRTSFQLTPQ Trigger: CTGAGGAGTCAGTTGGAAACTCGTCCTCCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCTGACTGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR CCA 90 bp | AGTTGCTTTACTATCACTGTCCGCTCTACCCACTGGGTCCTCTGTTaGGAGTCTACAAGAGCAGTTTCTGGCTTGGCCATCCTCAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: SCFTITVRSTHWVLC*ESTRAVSGLAILKS Trigger: AGACTTGAGGATGGCCAAGCCAGAAACTGCTCTTGTAGACTCCCAACAGAGGACCCAGTGGGTAGAGCGGACAGTGATAGTAAAGCAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR CCA 90 bp | CTCTACCCACTGGGTCCTCTGTTGGGAGTCTACAAGAGCAGTTTCTaGCTTGGCCATCCTCAAGTCTTTTGGAATGAATGCAAGAAGATT | + |
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Preference number: 1 (lower is better) Translates to: LYPLGPLLGVYKSSF*LGHPQVFWNECKKI Trigger: AATCTTCTTGCATTCATTCCAAAAGACTTGAGGATGGCCAAGCCAGAAACTGCTCTTGTAGACTCCCAACAGAGGACCCAGTGGGTAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR GCA 90 bp | GTATTTACCAACAGCTGGTGGTATAGTTTGATACTCCAGTCAGGTTaGCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: VFTNSWWYSLILQSG*HYLKPQLMGGGSEE Trigger: CTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCTGACTGGAGTATCAAACTATACCACCAGCTGTTGGTAAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR CCA 90 bp | GGAGTCTACAAGAGCAGTTTCTGGCTTGGCCATCCTCAAGTCTTTTaGAATGAATGCAAGAAGATTCTTCTCGTGTTTAAAAAGTATACA | + |
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Preference number: 1 (lower is better) Translates to: GVYKSSFWLGHPQVF*NECKKILLVFKKYT Trigger: TGTATACTTTTTAAACACGAGAAGAATCTTCTTGCATTCATTCCAAAAGACTTGAGGATGGCCAAGCCAGAAACTGCTCTTGTAGACTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGGGACGAGTTTCCAACTaGCTCCTCAGGGCAGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: RLPLSQTPANGRWVRRGRGRVSN*LLRAVV Trigger: TACCACTGCCCTGAGGAGTCAGTTGGAAACTCGTCC...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGGTCCGCTCTACCCACTaGGTCCTCTGTTGGGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQVRSTH*VLCWES Trigger: AGACTCCCAACAGAGGACCCAGTGGGTAGAGCGGAC...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGTGGCTTGCTTTGAAGTaGTGTTCCATACTGACTAGA | + |
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Preference number: 2 (lower is better) Translates to: RLPLSQTPANGRWVRRGRWLALK*CSILTR Trigger: TCTAGTCAGTATGGAACATCACTTCAAAGCAAGCCA...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGCTTCAGGGAATGGCTTaGTTTGAAGTGATGTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: RLPLSQTPANGRWVRRGRLQGMA*FEVMFH Trigger: ATGGAACATCACTTCAAAGCAAGCCATTCCCTGAAG...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGGTCTTTTGGAATGAATaGAAGAAGATTCTTCTCGTG | + |
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Preference number: 2 (lower is better) Translates to: RLPLSQTPANGRWVRRGRVFWNE*KKILLV Trigger: CACGAGAAGAATCTTCTTGCATTCATTCCAAAAGAC...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGTACAGGAATTCTAGCTaGAATTCTCTAGAACTACAG | + |
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Preference number: 2 (lower is better) Translates to: RLPLSQTPANGRWVRRGRYRNSS*NSLELQ Trigger: CTGTAGTTCTAGAGAATTCCAGCTAGAATTCCTGTA...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGCATCCTCAAGTCTTTTaGAATGAATGCAAGAAGATT | + |
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Preference number: 2 (lower is better) Translates to: RLPLSQTPANGRWVRRGRHPQVF*NECKKI Trigger: AATCTTCTTGCATTCATTCCAAAAGACTTGAGGATG...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR-3UTR CCA 90 bp | AATTGCACTGTAGTTAAATGTCTCACTGACAAGCCAAACCACCTTTGTTTTAGGCGTACTTGGTCCACTTaGGGTTCAGCTGGCCATAAG | + |
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Preference number: 2 (lower is better) Translates to: NCTVVKCLTDKPNHLCFRRTWST*GSAGHK Trigger: CTTATGGCCAGCTGAACCCCAAGTGGACCAAGTACG...CCTAAAACAAAGGTGGTTTGGCTTGTCAGTGAGACATTTAACTACAGTGCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131526.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGGTCTTTTGGAATGAATaGAAGAAGATTCTTCTCGTG | + |
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Preference number: 2 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQVFWNE*KKILLV Trigger: CACGAGAAGAATCTTCTTGCATTCATTCCAAAAGAC...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGTACAGGAATTCTAGCTaGAATTCTCTAGAACTACAG | + |
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Preference number: 2 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQYRNSS*NSLELQ Trigger: CTGTAGTTCTAGAGAATTCCAGCTAGAATTCCTGTA...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGCATCCTCAAGTCTTTTaGAATGAATGCAAGAAGATT | + |
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Preference number: 2 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQHPQVF*NECKKI Trigger: AATCTTCTTGCATTCATTCCAAAAGACTTGAGGATG...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR TCA 72 bp | GGTGGGTCAGAAGAGGTAGGAGGACGAGTTTCCAACTaGCTCCTCAGGGCAGTGGTATCTCACTCCTTACCT | + |
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Preference number: 3 (lower is better) Translates to: GGSEEVGGRVSN*LLRAVVSHSLP Trigger: AGGTAAGGAGTGAGATACCACTGCCCTGAGGAGTCAGTTGGAAACTCGTCCTCCTACCTCTTCTGACCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR CCA 72 bp | CAAAGCAGCAGGGACAGCAAACCTTATGGACGTACTTaGTCCACTTGGGGTTCAGCTGGCCATAAGGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: QSSRDSKPYGRT*STWGSAGHKAL Trigger: AAGAGCCTTATGGCCAGCTGAACCCCAAGTGGACCAAGTACGTCCATAAGGTTTGCTGTCCCTGCTGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131526.2 |
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| 3UTR-3UTR CAA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGAGAGCAGTTTCTGGCTaGGCCATCCTCAAGTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: RLPLSQTPANGRWVRRGRRAVSG*AILKSF Trigger: AAAAGACTTGAGGATGGCCAAGCCAGAAACTGCTCT...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR-3UTR CAA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGAAAGACTTGAATTATTaGAGGTTCTGGCGACTGGTG | + |
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Preference number: 3 (lower is better) Translates to: RLPLSQTPANGRWVRRGRKDLNY*RFWRLV Trigger: CACCAGTCGCCAGAACCTCAAATAATTCAAGTCTTT...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR-3UTR CAA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGACCACCTTTGGGCACTaGATTCCAGTTTTAAAACAG | + |
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Preference number: 3 (lower is better) Translates to: RLPLSQTPANGRWVRRGRTTFGH*IPVLKQ Trigger: CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGT...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR CCA 72 bp | TATAGTTGCTTTACTATCACTGTCCGCTCTACCCACTaGGTCCTCTGTTGGGAGTCTACAAGAGCAGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: YSCFTITVRSTH*VLCWESTRAVS Trigger: AGAAACTGCTCTTGTAGACTCCCAACAGAGGACCCAGTGGGTAGAGCGGACAGTGATAGTAAAGCAACTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR-3UTR CAA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGAGAGCAGTTTCTGGCTaGGCCATCCTCAAGTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQRAVSG*AILKSF Trigger: AAAAGACTTGAGGATGGCCAAGCCAGAAACTGCTCT...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR TCA 72 bp | GTATGCGCTCTACTGCAGAAGAAAGGCACAAATCAATaGCTAGTATTTACCAACAGCTGGTGGTATAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: VCALLQKKGTNQ*LVFTNSWWYSL Trigger: CAAACTATACCACCAGCTGTTGGTAAATACTAGTCATTGATTTGTGCCTTTCTTCTGCAGTAGAGCGCATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR TCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGAGTGGACCGTCTGGGTaGAGGAGCTGCCCAGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: RLPLSQTPANGRWVRRGRSGPSG*RSCPGV Trigger: TACACCTGGGCAGCTCCTTCACCCAGACGGTCCACT...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR GCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGCCACACGGCCCTGGCTaGCACTTTTGCTGCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: RLPLSQTPANGRWVRRGRPHGPG*HFCCTP Trigger: TGGAGTGCAGCAAAAGTGGCAGCCAGGGCCGTGTGG...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR TCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGACAAAGTTCAGGACCTaGGCTCGTAGTGCGGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: RLPLSQTPANGRWVRRGRTKFRT*ARSAGP Trigger: CGGACCCGCACTACGAGCTCAGGTCCTGAACTTTGT...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031082.8 |
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| CDS-3UTR CCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGTGTACCACACGGCCCTaGCTGCCACTTTTGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: RLPLSQTPANGRWVRRGRCTTRP*LPLLLH Trigger: GTGCAGCAAAAGTGGCAGCCAGGGCCGTGTGGTACA...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| 3UTR CAA 72 bp | TACTATCACTGTCCGCTCTACCCACTGGGTCCTCTGTaGGGAGTCTACAAGAGCAGTTTCTGGCTTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: YYHCPLYPLGPL*GVYKSSFWLGH Trigger: ATGGCCAAGCCAGAAACTGCTCTTGTAGACTCCCAACAGAGGACCCAGTGGGTAGAGCGGACAGTGATAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR TCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGCCGTCTCTCAGTGCCTaGGTGAGGTTTAAGATCTGG | + |
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Preference number: 4 (lower is better) Translates to: RLPLSQTPANGRWVRRGRPSLSA*VRFKIW Trigger: CCAGATCTTAAACCTCACTCAGGCACTGAGAGACGG...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR CCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGCGTACTTGGTCCACTTaGGGTTCAGCTGGCCATAAG | + |
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Preference number: 4 (lower is better) Translates to: RLPLSQTPANGRWVRRGRRTWST*GSAGHK Trigger: CTTATGGCCAGCTGAACCCCAAGTGGACCAAGTACG...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR CCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGTCAGAAAGGTACCCCTaGTTAGGAAGCAGGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: RLPLSQTPANGRWVRRGRSERYP*LGSRQP Trigger: AGGCTGCCTGCTTCCTAACCAGGGGTACCTTTCTGA...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR GCA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGCCACACGGCCCTGGCTaGCACTTTTGCTGCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQPHGPG*HFCCTP Trigger: TGGAGTGCAGCAAAAGTGGCAGCCAGGGCCGTGTGG...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR CCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGCCAAGCCCAGTGAAATaGATATGCTCGCCATTCATC | + |
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Preference number: 4 (lower is better) Translates to: RLPLSQTPANGRWVRRGRPSPVK*ICSPFI Trigger: GATGAATGGCGAGCATATCCATTTCACTGGGCTTGG...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR GCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGCCAGTGAAATGGATATaGTCGCCATTCATCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: RLPLSQTPANGRWVRRGRPVKWI*SPFIRM Trigger: CATCCTGATGAATGGCGAGCATATCCATTTCACTGG...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR GCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGAGAAAAAGGAACCTTTaGTTGAGGAAGCCAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: RLPLSQTPANGRWVRRGRRKRNL*LRKPSP Trigger: TGGGCTTGGCTTCCTCAAGCAAAGGTTCCTTTTTCT...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR GCA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGGGCATCTGTGCCAGCTaGATAGGACTCTTCCCGTCT | + |
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Preference number: 4 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQGICAS*IGLFPS Trigger: AGACGGGAAGAGTCCTATGCAGCTGGCACAGATGCC...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR TCA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGGGAAGCCAAGCCCAGTaGAATGGATATGCTCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQGSQAQ*NGYARH Trigger: ATGGCGAGCATATCCATTTCACTGGGCTTGGCTTCC...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR TCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGCTCATCACAGACATCTaGTTTTCAAAAGCAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RLPLSQTPANGRWVRRGRLITDI*FSKAAL Trigger: CAGAGCTGCTTTTGAAAATCAGATGTCTGTGATGAG...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR GCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGTCCGATGGAACTTTCTaGCTACTTTTGGCACTTTCT | + |
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Preference number: 4 (lower is better) Translates to: RLPLSQTPANGRWVRRGRSDGTF*LLLALS Trigger: AGAAAGTGCCAAAAGTAGGCAGAAAGTTCCATCGGA...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR CCA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGCGTACTTGGTCCACTTaGGGTTCAGCTGGCCATAAG | + |
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Preference number: 4 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQRTWST*GSAGHK Trigger: CTTATGGCCAGCTGAACCCCAAGTGGACCAAGTACG...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR CCA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGTCAGAAAGGTACCCCTaGTTAGGAAGCAGGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQSERYP*LGSRQP Trigger: AGGCTGCCTGCTTCCTAACCAGGGGTACCTTTCTGA...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR TCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGATACTTTTTGCCTCTTaGTTTTGCACGGTCAATTGC | + |
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Preference number: 4 (lower is better) Translates to: RLPLSQTPANGRWVRRGRILFAS*FCTVNC Trigger: GCAATTGACCGTGCAAAATCAAGAGGCAAAAAGTAT...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR TCA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGGCCATAAGGCTCTTCTaGTTTGGGTTTAAACACGCC | + |
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Preference number: 4 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQAIRLF*FGFKHA Trigger: GGCGTGTTTAAACCCAAATCAGAAGAGCCTTATGGC...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR GCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGTTTTGCACGGTCAATTaGACTGTAGTTAAATGTCTC | + |
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Preference number: 4 (lower is better) Translates to: RLPLSQTPANGRWVRRGRFCTVN*TVVKCL Trigger: GAGACATTTAACTACAGTGCAATTGACCGTGCAAAA...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR GCA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGCGCCATTCATCAGGATaGTTAAAGGGAAATGCTAGC | + |
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Preference number: 4 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQRHSSG*LKGNAS Trigger: GCTAGCATTTCCCTTTAAGCATCCTGATGAATGGCG...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR GCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGTTCTATTGCTTGCTCTaGTTTCAATACAATATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLPLSQTPANGRWVRRGRFYCLL*FQYNIS Trigger: GCTGATATTGTATTGAAAGCAGAGCAAGCAATAGAA...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031081.11 |
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| CDS-3UTR GCA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGAACTCCAATTTCTATTaGTTGCTCTGCTTTCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: RLPLSQTPANGRWVRRGRNSNFY*LLCFQY Trigger: GTATTGAAAGCAGAGCAAGCAATAGAAATTGGAGTT...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031081.11 |
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| CDS-3UTR TCA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGCTCATCACAGACATCTaGTTTTCAAAAGCAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQLITDI*FSKAAL Trigger: CAGAGCTGCTTTTGAAAATCAGATGTCTGTGATGAG...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR TCA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGCTTCCACTTGACCCTTaGGAAATTCTTTCTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQLPLDP*EILSGK Trigger: TTTCCCAGAAAGAATTTCTCAAGGGTCAAGTGGAAG...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031081.11 |
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| CDS-3UTR TCA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGATACTTTTTGCCTCTTaGTTTTGCACGGTCAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQILFAS*FCTVNC Trigger: GCAATTGACCGTGCAAAATCAAGAGGCAAAAAGTAT...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR GCA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGCTAAGGCATACTTTTTaGCTCTTGATTTTGCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQLRHTF*LLILHG Trigger: ACCGTGCAAAATCAAGAGGCAAAAAGTATGCCTTAG...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR TCA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGAAAGTAACTTCCACTTaGCCCTTGAGAAATTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQKVTST*PLRNSF Trigger: GAAAGAATTTCTCAAGGGTCAAGTGGAAGTTACTTT...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031081.11 |
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| CDS CCA 90 bp | CACACGGCCCTGGCTGCCACTTTTGCTGCACTCCACGATCACACATaGCATCTGTGCCAGCTGCATAGGACTCTTCCCGTCTCTCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HTALAATFAALHDHT*HLCQLHRTLPVSQC Trigger: GCACTGAGAGACGGGAAGAGTCCTATGCAGCTGGCACAGATGCCATGTGTGATCGTGGAGTGCAGCAAAAGTGGCAGCCAGGGCCGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR CAA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGCCCTGGCTGCCACTTTaGCTGCACTCCACGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: RLPLSQTPANGRWVRRGRPWLPL*LHSTIT Trigger: TGTGATCGTGGAGTGCAGCAAAAGTGGCAGCCAGGG...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR CAA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGAAAAGGAACCTTTGCTaGAGGAAGCCAAGCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLPLSQTPANGRWVRRGRKRNLC*RKPSPV Trigger: CACTGGGCTTGGCTTCCTCAAGCAAAGGTTCCTTTT...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR CAA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGCAGAAAAAGGAACCTTaGCTTGAGGAAGCCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLPLSQTPANGRWVRRGRQKKEP*LEEAKP Trigger: GGGCTTGGCTTCCTCAAGCAAAGGTTCCTTTTTCTG...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR CAA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGCCCTGGCTGCCACTTTaGCTGCACTCCACGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQPWLPL*LHSTIT Trigger: TGTGATCGTGGAGTGCAGCAAAAGTGGCAGCCAGGG...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS TCA 90 bp | TACAATATCAGCAAATTCTGGATCTTCCAAGAATGTATTTGTTTCTaGGCTCGTAGTGCGGGTCCGATCCAGCTCGGTGGACAAGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: YNISKFWIFQECICF*ARSAGPIQLGGQAR Trigger: GCGAGCTTGTCCACCGAGCTGGATCGGACCCGCACTACGAGCTCAGAAACAAATACATTCTTGGAAGATCCAGAATTTGCTGATATTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031081.11 |
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| CDS-3UTR CAA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGTTTTGCCTCTTGATTTaGCACGGTCAATTGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLPLSQTPANGRWVRRGRFCLLI*HGQLHC Trigger: ACAGTGCAATTGACCGTGCAAAATCAAGAGGCAAAA...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR CAA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGACTTTCTGCCTACTTTaGGCACTTTCTCTAAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RLPLSQTPANGRWVRRGRTFCLL*ALSLRH Trigger: ATGCCTTAGAGAAAGTGCCAAAAGTAGGCAGAAAGT...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR CAA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGAAAAGGAACCTTTGCTaGAGGAAGCCAAGCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQKRNLC*RKPSPV Trigger: CACTGGGCTTGGCTTCCTCAAGCAAAGGTTCCTTTT...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR CAA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGCAGAAAAAGGAACCTTaGCTTGAGGAAGCCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQQKKEP*LEEAKP Trigger: GGGCTTGGCTTCCTCAAGCAAAGGTTCCTTTTTCTG...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR CAA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGGCTCTGTCAAATCCTTaGTCAGTCTTAAAAAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLPLSQTPANGRWVRRGRALSNP*SVLKSS Trigger: TGAACTTTTTAAGACTGACAAAGGATTTGACAGAGC...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR CAA 90 bp | AGGTTGCCATTATCTCAAACCCCAGCTAATGGGAGGTGGGTCAGAAGAGGTAGGCAAAGTAACTTCCACTaGACCCTTGAGAAATTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RLPLSQTPANGRWVRRGRQSNFH*TLEKFF Trigger: AAAGAATTTCTCAAGGGTCAAGTGGAAGTTACTTTG...CCTACCTCTTCTGACCCACCTCCCATTAGCTGGGGTTTGAGATAATGGCAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031081.11 |
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| CDS-3UTR CAA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGTTTTGCCTCTTGATTTaGCACGGTCAATTGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQFCLLI*HGQLHC Trigger: ACAGTGCAATTGACCGTGCAAAATCAAGAGGCAAAA...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR CAA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGTCTAAGGCATACTTTTaGCCTCTTGATTTTGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQSKAYF*PLDFAR Trigger: CCGTGCAAAATCAAGAGGCAAAAAGTATGCCTTAGA...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR CAA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGACTTTCTGCCTACTTTaGGCACTTTCTCTAAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQTFCLL*ALSLRH Trigger: ATGCCTTAGAGAAAGTGCCAAAAGTAGGCAGAAAGT...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS-3UTR CAA 90 bp | TTCAGGTTCCCGGTAATGACCACCTTTGGGCACTTGATTCCAGTTTTAAAACAGATCTTCACACAAGTCTaGTACAAAGTTCATGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FRFPVMTTFGHLIPVLKQIFTQV*YKVHVR Trigger: TCTGACATGAACTTTGTACAAGACTTGTGTGAAGAT...CTGTTTTAAAACTGGAATCAAGTGCCCAAAGGTGGTCATTACCGGGAACCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS GCA 72 bp | GCGGGCTCGCGGAGGACATCCGCGCCCTCGTCCGCCTaGATTCTCACGGCGCTCCCGGGCGCGACCCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: AGSRRTSAPSSA*ILTALPGATLR Trigger: GCGGAGGGTCGCGCCCGGGAGCGCCGTGAGAATGCAGGCGGACGAGGGCGCGGATGTCCTCCGCGAGCCCGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 ENSMUST00000131526.2 |
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| CDS TCA 72 bp | AGGAGAAGAACGGTTTCCTGCAGTGGACCGTCTGGGTaGAGGAGCTGCCCAGGTGTACCACACGGCCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RRRTVSCSGPSG*RSCPGVPHGPG Trigger: GCCAGGGCCGTGTGGTACACCTGGGCAGCTCCTTCACCCAGACGGTCCACTGCAGGAAACCGTTCTTCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS CCA 72 bp | CAGGAGGAGAAGAACGGTTTCCTGCAGTGGACCGTCTaGGTGAAGGAGCTGCCCAGGTGTACCACACGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QEEKNGFLQWTV*VKELPRCTTRP Trigger: GGGCCGTGTGGTACACCTGGGCAGCTCCTTCACCCAGACGGTCCACTGCAGGAAACCGTTCTTCTCCTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS GCA 72 bp | CCAGGTGTACCACACGGCCCTGGCTGCCACTTTTGCTaGACTCCACGATCACACATGGCATCTGTGCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGVPHGPGCHFC*TPRSHMASVPA Trigger: AGCTGGCACAGATGCCATGTGTGATCGTGGAGTGCAGCAAAAGTGGCAGCCAGGGCCGTGTGGTACACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS CCA 72 bp | TGGGTGAAGGAGCTGCCCAGGTGTACCACACGGCCCTaGCTGCCACTTTTGCTGCACTCCACGATCACACAT | + |
|
Preference number: 6 (lower is better) Translates to: WVKELPRCTTRP*LPLLLHSTITH Trigger: ATGTGTGATCGTGGAGTGCAGCAAAAGTGGCAGCCAGGGCCGTGTGGTACACCTGGGCAGCTCCTTCACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS CCA 72 bp | CTGGCTGCCACTTTTGCTGCACTCCACGATCACACATaGCATCTGTGCCAGCTGCATAGGACTCTTCCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: LAATFAALHDHT*HLCQLHRTLPV Trigger: GACGGGAAGAGTCCTATGCAGCTGGCACAGATGCCATGTGTGATCGTGGAGTGCAGCAAAAGTGGCAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS TCA 72 bp | AGCAAATTCTGGATCTTCCAAGAATGTATTTGTTTCTaGGCTCGTAGTGCGGGTCCGATCCAGCTCGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SKFWIFQECICF*ARSAGPIQLGG Trigger: TCCACCGAGCTGGATCGGACCCGCACTACGAGCTCAGAAACAAATACATTCTTGGAAGATCCAGAATTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031081.11 |
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| CDS CAA 72 bp | CAAGTTTCGAGTCTCTTCAGAAAAAGGAACCTTTGCTaGAGGAAGCCAAGCCCAGTGAAATGGATATGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: QVSSLFRKRNLC*RKPSPVKWICS Trigger: CGAGCATATCCATTTCACTGGGCTTGGCTTCCTCAAGCAAAGGTTCCTTTTTCTGAAGAGACTCGAAACTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS TCA 72 bp | GGTCCACTTGGGGTTCAGCTGGCCATAAGGCTCTTCTaGTTTGGGTTTAAACACGCCAATAATATTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GPLGVQLAIRLF*FGFKHANNIPF Trigger: AAAAGGAATATTATTGGCGTGTTTAAACCCAAATCAGAAGAGCCTTATGGCCAGCTGAACCCCAAGTGGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031081.11 |
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| CDS GCA 72 bp | AATCAAGTTTCGAGTCTCTTCAGAAAAAGGAACCTTTaGTTGAGGAAGCCAAGCCCAGTGAAATGGATATGC | + |
|
Preference number: 6 (lower is better) Translates to: NQVSSLFRKRNL*LRKPSPVKWIC Trigger: GCATATCCATTTCACTGGGCTTGGCTTCCTCAAGCAAAGGTTCCTTTTTCTGAAGAGACTCGAAACTTGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS TCA 72 bp | GGTCCACTTGGGGTTCAGCTGGCCATAAGGCTCTTCTaGTTTGGGTTTAAACACGCCAATAATATTATAATA | + |
|
Preference number: 6 (lower is better) Translates to: GPLGVQLAIRLF*FGFKHANNIII Trigger: TATTATAATATTATTGGCGTGTTTAAACCCAAATCAGAAGAGCCTTATGGCCAGCTGAACCCCAAGTGGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031082.8 |
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| CDS CAA 90 bp | CACTTGACCCTTGAGAAATTCTTTCTGGGAAAACTCCAATTTCTATaGCTTGCTCTGCTTTCAATACAATATCAGCAAATTCTGGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: HLTLEKFFLGKLQFL*LALLSIQYQQILDL Trigger: AAGATCCAGAATTTGCTGATATTGTATTGAAAGCAGAGCAAGCAATAGAAATTGGAGTTTTCCCAGAAAGAATTTCTCAAGGGTCAAGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031081.11 |
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| CDS TCA 72 bp | TTTCAATTTTCTTTGCATACTTCATCTCATCATATTTaGCTAGCCAGTTATCATTTCCCCTGTCTGTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: FQFSLHTSSHHI*LASYHFPCLCS Trigger: GGAACACAGACAGGGGAAATGATAACTGGCTAGTCAAATATGATGAGATGAAGTATGCAAAGAAAATTGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031081.11 ENSMUST00000031082.8 |
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| CDS GCA 72 bp | TCTTTCTGGGAAAACTCCAATTTCTATTGCTTGCTCTaGTTTCAATACAATATCAGCAAATTCTGGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SFWENSNFYCLL*FQYNISKFWIF Trigger: GAAGATCCAGAATTTGCTGATATTGTATTGAAAGCAGAGCAAGCAATAGAAATTGGAGTTTTCCCAGAAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031081.11 |
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