Pregenerated sensors for PI16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024011Ensembl transcript IDs: ENSMUST00000114699.9, ENSMUST00000114701.10, ENSMUST00000155348.3, ENSMUST00000234618.2, ENSMUST00000234782.2
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCACTCAGAGATaGGGAGCCCTAGAGCCTGCAGGCAGACAGCCCCTCCCCCACCCC | + |
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Preference number: 1 (lower is better) Translates to: PALRVCCPSYMGTQR*GALEPAGRQPLPHP Trigger: GGGGTGGGGGAGGGGCTGTCTGCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR CCA 90 bp | TGCCTCACTCAGATGGCTCAAGAAAGAGCTCAGGGAAGCCGGGCGTaGTGGCGCACATGCTCCCAGCACTCAGGAGGCAGAGGCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: CLTQMAQERAQGSRA*WRTCSQHSGGRGRQ Trigger: CTGCCTGCCTCTGCCTCCTGAGTGCTGGGAGCATGTGCGCCACCACGCCCGGCTTCCCTGAGCTCTTTCTTGAGCCATCTGAGTGAGGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR CCA 90 bp | GGAGGGCACGGGTGGCCGGGGGAGCATGACCTGCTCCAGAAGCTCTaGCTTGGAAAGAGATTCCAGAATGGGCATGAGGCCAGTCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: GGHGWPGEHDLLQKL*LGKRFQNGHEASLL Trigger: GAGGAGACTGGCCTCATGCCCATTCTGGAATCTCTTTCCAAGCCAGAGCTTCTGGAGCAGGTCATGCTCCCCCGGCCACCCGTGCCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR GCA 90 bp | ATGGCTCAAGAAAGAGCTCAGGGAAGCCGGGCGTGGTGGCGCACATaGTCCCAGCACTCAGGAGGCAGAGGCAGGCAGATTTCTGAGTTC | + |
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Preference number: 1 (lower is better) Translates to: MAQERAQGSRAWWRT*SQHSGGRGRQISEF Trigger: GAACTCAGAAATCTGCCTGCCTCTGCCTCCTGAGTGCTGGGAGCATGTGCGCCACCACGCCCGGCTTCCCTGAGCTCTTTCTTGAGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR TCA 90 bp | GAACTCCACTGTAAAGGGCAAGGGAGGGCCCTGGTGTGCAGTTACTaGTGGGCTGGACCACACAGCCTTTCCCTTCCAGACGGGCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: ELHCKGQGRALVCSY*WAGPHSLSLPDGLW Trigger: CCAAAGCCCGTCTGGAAGGGAAAGGCTGTGTGGTCCAGCCCATCAGTAACTGCACACCAGGGCCCTCCCTTGCCCTTTACAGTGGAGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR TCA 90 bp | CAGGCGGTGGTATCTTGTTTGAGCGATAGGATAGGACACAGCAGTTaGTCAGCTGACCTCTTCTCCCTGGGAAGGCAGCAGGCACTTCAG | + |
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Preference number: 1 (lower is better) Translates to: QAVVSCLSDRIGHSS*SADLFSLGRQQALQ Trigger: CTGAAGTGCCTGCTGCCTTCCCAGGGAGAAGAGGTCAGCTGATCAACTGCTGTGTCCTATCCTATCGCTCAAACAAGATACCACCGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR TCA 90 bp | CAGACCAGCTTTCTCACAACACCCACCCTACCTCATGCAAAGCACTaGGACAGGCTCTCAGACAGGCTTTATTCAGGAGTCAAGGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: QTSFLTTPTLPHAKH*DRLSDRLYSGVKAA Trigger: GGCAGCCTTGACTCCTGAATAAAGCCTGTCTGAGAGCCTGTCTCAGTGCTTTGCATGAGGTAGGGTGGGTGTTGTGAGAAAGCTGGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
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| 3UTR GCA 90 bp | CATGGGTGGGCAGACCAGCTTTCTCACAACACCCACCCTACCTCATaGAAAGCACTGAGACAGGCTCTCAGACAGGCTTTATTCAGGAGT | + |
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Preference number: 1 (lower is better) Translates to: HGWADQLSHNTHPTS*KALRQALRQALFRS Trigger: ACTCCTGAATAAAGCCTGTCTGAGAGCCTGTCTCAGTGCTTTGCATGAGGTAGGGTGGGTGTTGTGAGAAAGCTGGTCTGCCCACCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
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| 3UTR TCA 90 bp | CAAGACTCCTTCCTAGCCCCTCTTACTTCCTGTCCCTTGTGTTCCTaGCCACACAGAACTTCTGGACCACTCCATTCTGATCCCCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: QDSFLAPLTSCPLCS*PHRTSGPLHSDPQR Trigger: TCTCTGGGGATCAGAATGGAGTGGTCCAGAAGTTCTGTGTGGTCAGGAACACAAGGGACAGGAAGTAAGAGGGGCTAGGAAGGAGTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| 3UTR GCA 90 bp | CTCTGTCTCAGGGCTCCTTCAAAGCACCTAAGTTGCCCAAAACCTTaGCAAGTTGAAACTTGTGACCAGGACAGGCCTGAGCATCAGTCC | + |
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Preference number: 1 (lower is better) Translates to: LCLRAPSKHLSCPKP*QVETCDQDRPEHQS Trigger: GGACTGATGCTCAGGCCTGTCCTGGTCACAAGTTTCAACTTGGCAAGGTTTTGGGCAACTTAGGTGCTTTGAAGGAGCCCTGAGACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| 3UTR CCA 90 bp | AACTTTTGGTCCTTCCTTCTGCTCTTCTTCCTGCAAGGCAACCTGTaGCTTGGCTTGGGTGGAGTGGAAGTTACCAGAAGGAATGGGATG | + |
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Preference number: 1 (lower is better) Translates to: NFWSFLLLFFLQGNL*LGLGGVEVTRRNGM Trigger: CATCCCATTCCTTCTGGTAACTTCCACTCCACCCAAGCCAAGCCACAGGTTGCCTTGCAGGAAGAAGAGCAGAAGGAAGGACCAAAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| 3UTR CCA 90 bp | GACTTCTGGGTCTTTATTGAGAGAAGTAGCCATGCTGTACTAGCCTaGCCAAGACTCCTTCCTAGCCCCTCTTACTTCCTGTCCCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: DFWVFIERSSHAVLA*PRLLPSPSYFLSLV Trigger: CACAAGGGACAGGAAGTAAGAGGGGCTAGGAAGGAGTCTTGGCCAGGCTAGTACAGCATGGCTACTTCTCTCAATAAAGACCCAGAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| 3UTR CCA 90 bp | GGAGCAGCAGTGGGCGGGGTGTGGAGACAGATCCCTGAAGCTCATTaGATAACCATCCTAGGCAAACTAAGCCTCAGTATTTGTAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: GAAVGGVWRQIPEAH*ITILGKLSLSICKR Trigger: TCTCTTACAAATACTGAGGCTTAGTTTGCCTAGGATGGTTATCCAATGAGCTTCAGGGATCTGTCTCCACACCCCGCCCACTGCTGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| 3UTR CCA 90 bp | ATGGAGGATGGAGGGCTGTGTGCTTTTACCCATGAGCTGTCACATTaGCCCCAGACACATAGATCAATGGGTGACTTCTGGGTCTTTATT | + |
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Preference number: 1 (lower is better) Translates to: MEDGGLCAFTHELSH*PQTHRSMGDFWVFI Trigger: AATAAAGACCCAGAAGTCACCCATTGATCTATGTGTCTGGGGCCAATGTGACAGCTCATGGGTAAAAGCACACAGCCCTCCATCCTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| 3UTR CCA 90 bp | CTTTTACCCATGAGCTGTCACATTGGCCCCAGACACATAGATCAATaGGTGACTTCTGGGTCTTTATTGAGAGAAGTAGCCATGCTGTAC | + |
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Preference number: 1 (lower is better) Translates to: LLPMSCHIGPRHIDQ*VTSGSLLREVAMLY Trigger: GTACAGCATGGCTACTTCTCTCAATAAAGACCCAGAAGTCACCCATTGATCTATGTGTCTGGGGCCAATGTGACAGCTCATGGGTAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| 3UTR CCA 90 bp | ATAAAGATGATGGGAACACGGTACTTGTGTACTGTTACACATGAATaGAGGATGGAGGGCTGTGTGCTTTTACCCATGAGCTGTCACATT | + |
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Preference number: 1 (lower is better) Translates to: IKMMGTRYLCTVTHE*RMEGCVLLPMSCHI Trigger: AATGTGACAGCTCATGGGTAAAAGCACACAGCCCTCCATCCTCCATTCATGTGTAACAGTACACAAGTACCGTGTTCCCATCATCTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| 3UTR-3UTR GCA 90 bp | TCAAGAAAGAGCTCAGGGAAGCCGGGCGTGGTGGCGCACATGCTCCCAGCACTCGGGAGCCCTAGAGCCTaGAGGCAGACAGCCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SRKSSGKPGVVAHMLPALGSPRA*RQTAPP Trigger: GGGAGGGGCTGTCTGCCTGCAGGCTCTAGGGCTCCC...GAGTGCTGGGAGCATGTGCGCCACCACGCCCGGCTTCCCTGAGCTCTTTCTTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR-3UTR GCA 90 bp | CCCACTTCGTTGGGGCTTGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCTGGGAGCCCTAGAGCCTaGAGGCAGACAGCCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: PTSLGLVLHLPSGSAVQAGSPRA*RQTAPP Trigger: GGGAGGGGCTGTCTGCCTGCAGGCTCTAGGGCTCCC...AGCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACAAGCCCCAACGAAGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR-3UTR TCA 90 bp | CATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCAGACAGCCCCTCCCCAGCAGTTGATCAGCTaGCCTCTTCTCCCAGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: HGHSEMGSPRACRQTAPPQQLIS*PLLPGL Trigger: AAGGCCTGGGAGAAGAGGTCAGCTGATCAACTGCTG...GGGAGGGGCTGTCTGCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 |
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| 3UTR-3UTR TCA 90 bp | CATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCAGACAGCCCCTCCCATTCCAGAATGGGCATaGGGCCAGTCTCCTCACCAG | + |
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Preference number: 2 (lower is better) Translates to: HGHSEMGSPRACRQTAPPIPEWA*GQSPHQ Trigger: CTGGTGAGGAGACTGGCCTCATGCCCATTCTGGAAT...GGGAGGGGCTGTCTGCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR-3UTR CCA 90 bp | CTACATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCAGACAGCCCCTGGCAAGGGAGGGCCCTaGTGTGCAGTTACTGATGGG | + |
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Preference number: 2 (lower is better) Translates to: LHGHSEMGSPRACRQTAPGKGGP*CAVTDG Trigger: CCCATCAGTAACTGCACACCAGGGCCCTCCCTTGCC...AGGGGCTGTCTGCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR-3UTR CCA 90 bp | CATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCAGACAGCCCCTCCCAGAACCCCACTTCGTTaGGGCTTGTTCTTCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: HGHSEMGSPRACRQTAPPRTPLR*GLFFTC Trigger: GCAGGTGAAGAACAAGCCCCAACGAAGTGGGGTTCT...GGGAGGGGCTGTCTGCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCTCAAGAAAGAGCTCAGGGAAGCCGGGCGTGGTGGCGCACATGCTCCCAGCCAGTTACTGATGGGCTaGACCACACAGCCTTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: WLKKELREAGRGGAHAPSQLLMG*TTQPFP Trigger: AGGGAAAGGCTGTGTGGTCCAGCCCATCAGTAACTG...GCTGGGAGCATGTGCGCCACCACGCCCGGCTTCCCTGAGCTCTTTCTTGAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGAAGGCAGCAGGCACTTCAGATATTCCTTGCCTCACTCAGATGGCTCAACAGGGAAGCCGGGCGTaGTGGCGCACATGCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PGKAAGTSDIPCLTQMAQQGSRA*WRTCSQ Trigger: CTGGGAGCATGTGCGCCACCACGCCCGGCTTCCCTG...TTGAGCCATCTGAGTGAGGCAAGGAATATCTGAAGTGCCTGCTGCCTTCCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR-3UTR TCA 90 bp | TCACCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCACTCAGAGATGGGGACTGGTGTGCAGTTACTaGTGGGCTGGACCACACAGC | + |
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Preference number: 2 (lower is better) Translates to: SPALRVCCPSYMGTQRWGLVCSY*WAGPHS Trigger: GCTGTGTGGTCCAGCCCATCAGTAACTGCACACCAG...TCCCCATCTCTGAGTGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCACCCTACCTCATGCAAAGCACTGAGACAGGCTCTCAGACAGGCTTTATTCGGGAGCCCTAGAGCCTaGAGGCAGACAGCCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: THPTSCKALRQALRQALFGSPRA*RQTAPP Trigger: GGGAGGGGCTGTCTGCCTGCAGGCTCTAGGGCTCCC...GAATAAAGCCTGTCTGAGAGCCTGTCTCAGTGCTTTGCATGAGGTAGGGTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
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| 3UTR-3UTR CCA 90 bp | CTACATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCAGACAGCCCCTCAGTTACTGATGGGCTaGACCACACAGCCTTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LHGHSEMGSPRACRQTAPQLLMG*TTQPFP Trigger: AGGGAAAGGCTGTGTGGTCCAGCCCATCAGTAACTG...AGGGGCTGTCTGCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR-3UTR CCA 90 bp | TCACCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCACTCAGAGATGGGGACACCCCTCCATCCCCTaGGAAGCAGACAAGTATCCC | + |
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Preference number: 2 (lower is better) Translates to: SPALRVCCPSYMGTQRWGHPSIP*EADKYP Trigger: GGGATACTTGTCTGCTTCCCAGGGGATGGAGGGGTG...TCCCCATCTCTGAGTGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCACTCAGAGATGGCACCCCTCCATCCCCTaGGAAGCAGACAAGTATCCC | + |
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Preference number: 2 (lower is better) Translates to: SSPALRVCCPSYMGTQRWHPSIP*EADKYP Trigger: GGGATACTTGTCTGCTTCCCAGGGGATGGAGGGGTG...CCATCTCTGAGTGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCATTAGGAGCAGCAGTGGGCGGGGTGTGGAGACAGATCCCTGAAGCTCATGCTGTCCAAGCTACATaGGCACTCAGAGATGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PALGAAVGGVWRQIPEAHAVQAT*ALRDGE Trigger: CTCCCCATCTCTGAGTGCCCATGTAGCTTGGACAGC...ATGAGCTTCAGGGATCTGTCTCCACACCCCGCCCACTGCTGCTCCTAATGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| 3UTR-3UTR CCA 90 bp | CCCCACTTCGTTGGGGCTTGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCAGAACCCCACTTCGTTaGGGCTTGTTCTTCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: PHFVGACSSPALRVCCPSRTPLR*GLFFTC Trigger: GCAGGTGAAGAACAAGCCCCAACGAAGTGGGGTTCT...GCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACAAGCCCCAACGAAGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR CAA 90 bp | CTGACCTCTTCTCCCTGGGAAGGCAGCAGGCACTTCAGATATTCCTaGCCTCACTCAGATGGCTCAAGAAAGAGCTCAGGGAAGCCGGGC | + |
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Preference number: 2 (lower is better) Translates to: LTSSPWEGSRHFRYS*PHSDGSRKSSGKPG Trigger: GCCCGGCTTCCCTGAGCTCTTTCTTGAGCCATCTGAGTGAGGCAAGGAATATCTGAAGTGCCTGCTGCCTTCCCAGGGAGAAGAGGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCATTAGGAGCAGCAGTGGGCGGGGTGTGGAGACAGATCCCTGAAGCTCATGTGTGCTTTTACCCATaGGCTGTCACATTGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: PALGAAVGGVWRQIPEAHVCFYP*AVTLAP Trigger: TGGGGCCAATGTGACAGCTCATGGGTAAAAGCACAC...ATGAGCTTCAGGGATCTGTCTCCACACCCCGCCCACTGCTGCTCCTAATGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGGAGGGCCCTGGTGTGCAGTTACTGATGGGCTGGACCACACAGCCTTTCCTGCTCCAGAAGCTCTaGCTTGGAAAGAGATTCCAG | + |
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Preference number: 2 (lower is better) Translates to: AREGPGVQLLMGWTTQPFLLQKL*LGKRFQ Trigger: CTGGAATCTCTTTCCAAGCCAGAGCTTCTGGAGCAG...GAAAGGCTGTGTGGTCCAGCCCATCAGTAACTGCACACCAGGGCCCTCCCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGACAGAAGAGTTGCATGGGTGGGCAGACCAGCTTTCTCACAACACCCACCCCAGCAGTTGATCAGCTaGCCTCTTCTCCCAGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: EDRRVAWVGRPAFSQHPPQQLIS*PLLPGL Trigger: AAGGCCTGGGAGAAGAGGTCAGCTGATCAACTGCTG...GGGTGGGTGTTGTGAGAAAGCTGGTCTGCCCACCCATGCAACTCTTCTGTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| 3UTR-3UTR TCA 90 bp | ACCTGTGGCTTGGCTTGGGTGGAGTGGAAGTTACCAGAAGGAATGGGATGGCTCATTCCAGAATGGGCATaGGGCCAGTCTCCTCACCAG | + |
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Preference number: 2 (lower is better) Translates to: TCGLAWVEWKLPEGMGWLIPEWA*GQSPHQ Trigger: CTGGTGAGGAGACTGGCCTCATGCCCATTCTGGAAT...GAGCCATCCCATTCCTTCTGGTAACTTCCACTCCACCCAAGCCAAGCCACAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155348.3 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGACCTCTTCTCCCTGGGAAGGCAGCAGGCACTTCAGATATTCCTTGCCTAGGCAGGCAGATTTCTaGGTTCGAGGTCAGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: QLTSSPWEGSRHFRYSLPRQADF*VRGQPG Trigger: ACCAGGCTGACCTCGAACTCAGAAATCTGCCTGCCT...AGGCAAGGAATATCTGAAGTGCCTGCTGCCTTCCCAGGGAGAAGAGGTCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCACTTCGTTGGGGCTTGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCCCAGAAGCTCTGGCTTaGAAAGAGATTCCAGAATGG | + |
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Preference number: 2 (lower is better) Translates to: PHFVGACSSPALRVCCPSPEALA*KEIPEW Trigger: CCATTCTGGAATCTCTTTCCAAGCCAGAGCTTCTGG...GCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACAAGCCCCAACGAAGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCATCCCCTGGGAAGCAGACAAGTATCCCCAGAATCATGTCCTCTGTAGAACTGGTGTGCAGTTACTaGTGGGCTGGACCACACAGC | + |
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Preference number: 2 (lower is better) Translates to: PPSPGKQTSIPRIMSSVELVCSY*WAGPHS Trigger: GCTGTGTGGTCCAGCCCATCAGTAACTGCACACCAG...TTCTACAGAGGACATGATTCTGGGGATACTTGTCTGCTTCCCAGGGGATGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCACTCAGAGACAGTTACTGATGGGCTaGACCACACAGCCTTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: CSSPALRVCCPSYMGTQRQLLMG*TTQPFP Trigger: AGGGAAAGGCTGTGTGGTCCAGCCCATCAGTAACTG...TCTCTGAGTGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGTGGAGTGGAAGTTACCAGAAGGAATGGGATGGCTCAGAGAGTTGGAGGGCTGTCCAAGCTACATaGGCACTCAGAGATGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LGWSGSYQKEWDGSESWRAVQAT*ALRDGE Trigger: CTCCCCATCTCTGAGTGCCCATGTAGCTTGGACAGC...CCTCCAACTCTCTGAGCCATCCCATTCCTTCTGGTAACTTCCACTCCACCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCCTTCTGCTCTTCTTCCTGCAAGGCAACCTGTGGCTTGGCTTGGGTGGACCAGAAGGAATGGGATaGCTCAGAGAGTTGGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SFLLLFFLQGNLWLGLGGPEGMG*LRELEG Trigger: ACCCTCCAACTCTCTGAGCCATCCCATTCCTTCTGG...TCCACCCAAGCCAAGCCACAGGTTGCCTTGCAGGAAGAAGAGCAGAAGGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGCATTAGGAGCAGCAGTGGGCGGGGTGTGGAGACAGATCCCTGAAGCTCATACTGTTACACATGAATaGAGGATGGAGGGCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: PALGAAVGGVWRQIPEAHTVTHE*RMEGCV Trigger: CACACAGCCCTCCATCCTCCATTCATGTGTAACAGT...ATGAGCTTCAGGGATCTGTCTCCACACCCCGCCCACTGCTGCTCCTAATGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| 3UTR-3UTR CCA 90 bp | ACCCCACTTCGTTGGGGCTTGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCCAGAAGCTCTGGCTTaGAAAGAGATTCCAGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: TPLRWGLFFTCPQGLLSKPEALA*KEIPEW Trigger: CCATTCTGGAATCTCTTTCCAAGCCAGAGCTTCTGG...CTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACAAGCCCCAACGAAGTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| 3UTR CAA 90 bp | TTTGGTCCTTCCTTCTGCTCTTCTTCCTGCAAGGCAACCTGTGGCTaGGCTTGGGTGGAGTGGAAGTTACCAGAAGGAATGGGATGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: FGPSFCSSSCKATCG*AWVEWKLPEGMGWL Trigger: GAGCCATCCCATTCCTTCTGGTAACTTCCACTCCACCCAAGCCAAGCCACAGGTTGCCTTGCAGGAAGAAGAGCAGAAGGAAGGACCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| 3UTR-3UTR GCA 90 bp | GCAGGCACTTCAGATATTCCTTGCCTCACTCAGATGGCTCAAGAAAGAGCTCAGGGCTTGTTCTTCACCTaGCCTCAGGGTCTGCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: AGTSDIPCLTQMAQERAQGLFFT*PQGLLS Trigger: GGACAGCAGACCCTGAGGGCAGGTGAAGAACAAGCC...CTGAGCTCTTTCTTGAGCCATCTGAGTGAGGCAAGGAATATCTGAAGTGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCTCTCAGACAGGCTTTATTCAGGAGTCAAGGCTGCCTCCATTCCCTGTCTCCTTCTGCTCTTCTTCCTaGAAGGCAACCTGTGGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: GSQTGFIQESRLPPFPVSFCSSS*KATCGL Trigger: CAAGCCACAGGTTGCCTTGCAGGAAGAAGAGCAGAA...GGAGACAGGGAATGGAGGCAGCCTTGACTCCTGAATAAAGCCTGTCTGAGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
||
| 3UTR-3UTR GCA 90 bp | CCCCACTTCGTTGGGGCTTGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCAGTTGCCCAAAACCTTaGCAAGTTGAAACTTGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: PHFVGACSSPALRVCCPSSCPKP*QVETCD Trigger: GTCACAAGTTTCAACTTGGCAAGGTTTTGGGCAACT...GCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACAAGCCCCAACGAAGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGGAAGGCAGCAGGCACTTCAGATATTCCTTGCCTCACTCAGATGGCTCAAGAAGAGTTGCATGGGTaGGCAGACCAGCTTTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: PGKAAGTSDIPCLTQMAQEELHG*ADQLSH Trigger: GTGAGAAAGCTGGTCTGCCCACCCATGCAACTCTTC...TTGAGCCATCTGAGTGAGGCAAGGAATATCTGAAGTGCCTGCTGCCTTCCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155348.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAGCCAAGTTCCTGAGGAGGCTAAGATCCTCTGTCCTTAAGAAACTAGGTACACTGGTGTGCAGTTACTaGTGGGCTGGACCACACAGC | + |
|
Preference number: 2 (lower is better) Translates to: RAKFLRRLRSSVLKKLGTLVCSY*WAGPHS Trigger: GCTGTGTGGTCCAGCCCATCAGTAACTGCACACCAG...TGTACCTAGTTTCTTAAGGACAGAGGATCTTAGCCTCCTCAGGAACTTGGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCCCCTGGGAAGCAGACAAGTATCCCCAGAATCATGTCCTCTGTAGAACTCCACAGTTACTGATGGGCTaGACCACACAGCCTTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: IPWEADKYPQNHVLCRTPQLLMG*TTQPFP Trigger: AGGGAAAGGCTGTGTGGTCCAGCCCATCAGTAACTG...TGGAGTTCTACAGAGGACATGATTCTGGGGATACTTGTCTGCTTCCCAGGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGGAAGGCAGCAGGCACTTCAGATATTCCTTGCCTCACTCAGATGGCTCAAGACTGCTCCAGAAGCTCTaGCTTGGAAAGAGATTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: WEGSRHFRYSLPHSDGSRLLQKL*LGKRFQ Trigger: CTGGAATCTCTTTCCAAGCCAGAGCTTCTGGAGCAG...TCTTGAGCCATCTGAGTGAGGCAAGGAATATCTGAAGTGCCTGCTGCCTTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| 3UTR-3UTR GCA 90 bp | TATGCACAGCGCATACAAGGATGGGTGGACCTTGAAGAGATGTTAGGTAGTCACACCCACCCTACCTCATaGAAAGCACTGAGACAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: YAQRIQGWVDLEEMLGSHTHPTS*KALRQA Trigger: AGCCTGTCTCAGTGCTTTGCATGAGGTAGGGTGGGT...GTGACTACCTAACATCTCTTCAAGGTCCACCCATCCTTGTATGCGCTGTGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| 3UTR-3UTR CCA 90 bp | TATGCACAGCGCATACAAGGATGGGTGGACCTTGAAGAGATGTTAGGTAGTCACAGAACCCCACTTCGTTaGGGCTTGTTCTTCACCTGC | + |
|
Preference number: 2 (lower is better) Translates to: YAQRIQGWVDLEEMLGSHRTPLR*GLFFTC Trigger: GCAGGTGAAGAACAAGCCCCAACGAAGTGGGGTTCT...GTGACTACCTAACATCTCTTCAAGGTCCACCCATCCTTGTATGCGCTGTGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| 3UTR-3UTR CCA 90 bp | TGTACTGTTACACATGAATGGAGGATGGAGGGCTGTGTGCTTTTACCCATGAGCCCAGAAGGAATGGGATaGCTCAGAGAGTTGGAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: CTVTHEWRMEGCVLLPMSPEGMG*LRELEG Trigger: ACCCTCCAACTCTCTGAGCCATCCCATTCCTTCTGG...GCTCATGGGTAAAAGCACACAGCCCTCCATCCTCCATTCATGTGTAACAGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| 3UTR-3UTR CCA 90 bp | TATGCACAGCGCATACAAGGATGGGTGGACCTTGAAGAGATGTTAGGTAGTCACTTGGCTTGGGTGGAGTaGAAGTTACCAGAAGGAATG | + |
|
Preference number: 2 (lower is better) Translates to: YAQRIQGWVDLEEMLGSHLAWVE*KLPEGM Trigger: CATTCCTTCTGGTAACTTCCACTCCACCCAAGCCAA...GTGACTACCTAACATCTCTTCAAGGTCCACCCATCCTTGTATGCGCTGTGCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| 3UTR-3UTR CCA 90 bp | CAAATACACTCAAATAAAGATGATGGGAACACGGTACTTGTGTACTGTTACACAGAAGAGTTGCATGGGTaGGCAGACCAGCTTTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: QIHSNKDDGNTVLVYCYTEELHG*ADQLSH Trigger: GTGAGAAAGCTGGTCTGCCCACCCATGCAACTCTTC...TGTGTAACAGTACACAAGTACCGTGTTCCCATCATCTTTATTTGAGTGTATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| 3UTR CAA 90 bp | AACAACAACAAATACACTCAAATAAAGATGATGGGAACACGGTACTaGTGTACTGTTACACATGAATGGAGGATGGAGGGCTGTGTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: NNNKYTQIKMMGTRY*CTVTHEWRMEGCVL Trigger: AAGCACACAGCCCTCCATCCTCCATTCATGTGTAACAGTACACAAGTACCGTGTTCCCATCATCTTTATTTGAGTGTATTTGTTGTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| 3UTR CCA 72 bp | ATGGCTCAAGAAAGAGCTCAGGGAAGCCGGGCGTGGTaGCGCACATGCTCCCAGCACTCAGGAGGCAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: MAQERAQGSRAW*RTCSQHSGGRG Trigger: GCCTCTGCCTCCTGAGTGCTGGGAGCATGTGCGCCACCACGCCCGGCTTCCCTGAGCTCTTTCTTGAGCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| 3UTR TCA 72 bp | AGAGGAGAGGGGAGGGCACGGGTGGCCGGGGGAGCATaGCCTGCTCCAGAAGCTCTGGCTTGGAAAGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: RGEGRARVAGGA*PAPEALAWKEI Trigger: AATCTCTTTCCAAGCCAGAGCTTCTGGAGCAGGTCATGCTCCCCCGGCCACCCGTGCCCTCCCCTCTCCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| 3UTR CCA 72 bp | AGGGTCTGCTGTCCAAGCTACATGGGCACTCAGAGATaGGGAGCCCTAGAGCCTGCAGGCAGACAGCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RVCCPSYMGTQR*GALEPAGRQPL Trigger: GAGGGGCTGTCTGCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAGCTTGGACAGCAGACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| 3UTR CCA 72 bp | CAGATGGCTCAAGAAAGAGCTCAGGGAAGCCGGGCGTaGTGGCGCACATGCTCCCAGCACTCAGGAGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QMAQERAQGSRA*WRTCSQHSGGR Trigger: TCTGCCTCCTGAGTGCTGGGAGCATGTGCGCCACCACGCCCGGCTTCCCTGAGCTCTTTCTTGAGCCATCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| 3UTR GCA 72 bp | CACAGAACCCCACTTCGTTGGGGCTTGTTCTTCACCTaGCCTCAGGGTCTGCTGTCCAAGCTACATGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: HRTPLRWGLFFT*PQGLLSKLHGH Trigger: GTGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACAAGCCCCAACGAAGTGGGGTTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCATTAGGAGCAGCAGTGGGCGGGGTGTGGAGACAGATCCCTGAAGCTCATAAGAAGACAGAAGAGTaGCATGGGTGGGCAGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: PALGAAVGGVWRQIPEAHKKTEE*HGWADQ Trigger: CTGGTCTGCCCACCCATGCAACTCTTCTGTCTTCTT...ATGAGCTTCAGGGATCTGTCTCCACACCCCGCCCACTGCTGCTCCTAATGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGCAACCTGTGGCTTGGCTTGGGTGGAGTGGAAGTTACCAGAAGGAATGGGAAGGCAACCTGTGGCTaGGCTTGGGTGGAGTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: QGNLWLGLGGVEVTRRNGKATCG*AWVEWK Trigger: CTTCCACTCCACCCAAGCCAAGCCACAGGTTGCCTT...CCCATTCCTTCTGGTAACTTCCACTCCACCCAAGCCAAGCCACAGGTTGCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCTCAAGAAAGAGCTCAGGGAAGCCGGGCGTGGTGGCGCACATGCTCCCAGTCCAGAAGCTCTGGCTaGGAAAGAGATTCCAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: MAQERAQGSRAWWRTCSQSRSSG*ERDSRM Trigger: CATTCTGGAATCTCTTTCCAAGCCAGAGCTTCTGGA...CTGGGAGCATGTGCGCCACCACGCCCGGCTTCCCTGAGCTCTTTCTTGAGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGTCAGCCTGGTCTACAAAGCAGAACCCCACTTCGTaGGGGCTTGTTCTTCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: QEAEAGRFLSSRSAWSTKQNPTS*GLVLHL Trigger: CAGGTGAAGAACAAGCCCCAACGAAGTGGGGTTCTG...CTTTGTAGACCAGGCTGACCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| 3UTR TCA 72 bp | TTCCTGACCACACAGAACTTCTGGACCACTCCATTCTaGTCCCCAGAGAGGTTTCTGGGCCTCGGAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: FLTTQNFWTTPF*SPERFLGLGAL Trigger: CAGAGCTCCGAGGCCCAGAAACCTCTCTGGGGATCAGAATGGAGTGGTCCAGAAGTTCTGTGTGGTCAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| 3UTR CCA 72 bp | GCTTGGGTGGAGTGGAAGTTACCAGAAGGAATGGGATaGCTCAGAGAGTTGGAGGGTAGTGGGGAAAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: AWVEWKLPEGMG*LRELEGSGERG Trigger: TCCTCTTTCCCCACTACCCTCCAACTCTCTGAGCCATCCCATTCCTTCTGGTAACTTCCACTCCACCCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
||
| 3UTR CCA 72 bp | TCCTTCCTTCTGCTCTTCTTCCTGCAAGGCAACCTGTaGCTTGGCTTGGGTGGAGTGGAAGTTACCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SFLLLFFLQGNL*LGLGGVEVTRR Trigger: CCTTCTGGTAACTTCCACTCCACCCAAGCCAAGCCACAGGTTGCCTTGCAGGAAGAAGAGCAGAAGGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAAGGCAGCAGGCACTTCAGATATTCCTTGCCTCACTCAGATGGCTCAAGACAGAACCCCACTTCGTaGGGGCTTGTTCTTCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: WEGSRHFRYSLPHSDGSRQNPTS*GLVLHL Trigger: CAGGTGAAGAACAAGCCCCAACGAAGTGGGGTTCTG...TCTTGAGCCATCTGAGTGAGGCAAGGAATATCTGAAGTGCCTGCTGCCTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| 3UTR GCA 72 bp | GCAGACCAGCTTTCTCACAACACCCACCCTACCTCATaGAAAGCACTGAGACAGGCTCTCAGACAGGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: ADQLSHNTHPTS*KALRQALRQAL Trigger: TAAAGCCTGTCTGAGAGCCTGTCTCAGTGCTTTGCATGAGGTAGGGTGGGTGTTGTGAGAAAGCTGGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
||
| 3UTR CCA 72 bp | GGAGGGCTGTGTGCTTTTACCCATGAGCTGTCACATTaGCCCCAGACACATAGATCAATGGGTGACTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GGLCAFTHELSH*PQTHRSMGDFW Trigger: CCAGAAGTCACCCATTGATCTATGTGTCTGGGGCCAATGTGACAGCTCATGGGTAAAAGCACACAGCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGAATCATGTCCTCTGTAGAACTCCACTGTAAAGGGCAAGGGAGGGCCCTGCACTTCAGATATTCCTaGCCTCACTCAGATGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PRIMSSVELHCKGQGRALHFRYS*PHSDGS Trigger: TGAGCCATCTGAGTGAGGCAAGGAATATCTGAAGTG...CAGGGCCCTCCCTTGCCCTTTACAGTGGAGTTCTACAGAGGACATGATTCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| 3UTR TCA 72 bp | GTATCTTGTTTGAGCGATAGGATAGGACACAGCAGTTaGTCAGCTGACCTCTTCTCCCTGGGAAGGCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VSCLSDRIGHSS*SADLFSLGRQQ Trigger: CTGCTGCCTTCCCAGGGAGAAGAGGTCAGCTGATCAACTGCTGTGTCCTATCCTATCGCTCAAACAAGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| 3UTR GCA 72 bp | AGGGCTCCTTCAAAGCACCTAAGTTGCCCAAAACCTTaGCAAGTTGAAACTTGTGACCAGGACAGGCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RAPSKHLSCPKP*QVETCDQDRPE Trigger: CTCAGGCCTGTCCTGGTCACAAGTTTCAACTTGGCAAGGTTTTGGGCAACTTAGGTGCTTTGAAGGAGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| 3UTR CCA 72 bp | GTGGGCGGGGTGTGGAGACAGATCCCTGAAGCTCATTaGATAACCATCCTAGGCAAACTAAGCCTCAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: VGGVWRQIPEAH*ITILGKLSLSI Trigger: AATACTGAGGCTTAGTTTGCCTAGGATGGTTATCCAATGAGCTTCAGGGATCTGTCTCCACACCCCGCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| 3UTR TCA 72 bp | GTATCTTGTTTGAGCGATAGGATAGGACACAGCAGTTaGTCAGCTGACCTCTTCTCCCAGGCCTTTGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: VSCLSDRIGHSS*SADLFSQAFGC Trigger: ACACCCAAAGGCCTGGGAGAAGAGGTCAGCTGATCAACTGCTGTGTCCTATCCTATCGCTCAAACAAGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 |
||
| 3UTR TCA 72 bp | TTTCTCACAACACCCACCCTACCTCATGCAAAGCACTaGGACAGGCTCTCAGACAGGCTTTATTCAGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: FLTTPTLPHAKH*DRLSDRLYSGV Trigger: GACTCCTGAATAAAGCCTGTCTGAGAGCCTGTCTCAGTGCTTTGCATGAGGTAGGGTGGGTGTTGTGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
||
| 3UTR CCA 72 bp | GTCTTTATTGAGAGAAGTAGCCATGCTGTACTAGCCTaGCCAAGACTCCTTCCTAGCCCCTCTTACTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VFIERSSHAVLA*PRLLPSPSYFL Trigger: CAGGAAGTAAGAGGGGCTAGGAAGGAGTCTTGGCCAGGCTAGTACAGCATGGCTACTTCTCTCAATAAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| 3UTR TCA 72 bp | AAAAACACTTGTCACACAAGCAGAAGGACCCGAGTTTaGGCTAGCACCCACACCAAAGCTAGGTGCAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: KNTCHTSRRTRV*ASTHTKARCSD Trigger: ATCACTGCACCTAGCTTTGGTGTGGGTGCTAGCTCAAACTCGGGTCCTTCTGCTTGTGTGACAAGTGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| 3UTR TCA 72 bp | TTAAATGAAAGTCAAAGACCAGCAAGTGCAGGCCCATaGAATGGCTCAGCGGGTGAAGGTGTTTGTTACCGA | + |
|
Preference number: 3 (lower is better) Translates to: LNESQRPASAGP*NGSAGEGVCYR Trigger: TCGGTAACAAACACCTTCACCCGCTGAGCCATTTCATGGGCCTGCACTTGCTGGTCTTTGACTTTCATTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR CCA 90 bp | CATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCAGACAGCCCCTCCCTCTGAGCGTAGGCCTTaGCGAAGGCGGCCAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HGHSEMGSPRACRQTAPPSERRP*RRRPAR Trigger: ACGAGCTGGCCGCCTTCGCCAAGGCCTACGCTCAGA...GGGAGGGGCTGTCTGCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCTCAAGAAAGAGCTCAGGGAAGCCGGGCGTGGTGGCGCACATGCTCCCAGCAGCAGGAGGAGCAGTaGCGGCGGCAACATCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: MAQERAQGSRAWWRTCSQQQEEQ*RRQHHP Trigger: TGGGTGATGTTGCCGCCGCCACTGCTCCTCCTGCTG...CTGGGAGCATGTGCGCCACCACGCCCGGCTTCCCTGAGCTCTTTCTTGAGCCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCAAGGGAGGGCCCTGGTGTGCAGTTACTGATGGGCTGGACCACACAGCCTTCTGAGCGTAGGCCTTaGCGAAGGCGGCCAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RAREGPGVQLLMGWTTQPSERRP*RRRPAR Trigger: ACGAGCTGGCCGCCTTCGCCAAGGCCTACGCTCAGA...AGGCTGTGTGGTCCAGCCCATCAGTAACTGCACACCAGGGCCCTCCCTTGCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR TCA 90 bp | CATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCAGACAGCCCCTCCCCCATGCCCTCGTCCGTaGTGGCAAACAAGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HGHSEMGSPRACRQTAPPPCPRP*WQTSSL Trigger: GAGAGAACTTGTTTGCCATCACGGACGAGGGCATGG...GGGAGGGGCTGTCTGCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCCAAGCTACATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCTCTGAGCGTAGGCCTTaGCGAAGGCGGCCAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: CCPSYMGTQRWGALEPAGSERRP*RRRPAR Trigger: ACGAGCTGGCCGCCTTCGCCAAGGCCTACGCTCAGA...GCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAGCTTGGACAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTCAAGAAAGAGCTCAGGGAAGCCGGGCGTGGTGGCGCACATGCTCCCAGCCAGCACCGGTTTCCCTaGAGCTTGGGGCTTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WLKKELREAGRGGAHAPSQHRFP*SLGLQL Trigger: CAACTGAAGCCCCAAGCTCCAGGGAAACCGGTGCTG...GCTGGGAGCATGTGCGCCACCACGCCCGGCTTCCCTGAGCTCTTTCTTGAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234782.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCAAGGGAGGGCCCTGGTGTGCAGTTACTGATGGGCTGGACCACACAGCCTCTTGGAGGCGAATCCTaGGCCTTTTCCGGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RAREGPGVQLLMGWTTQPLGGES*AFSGFL Trigger: GAGAAACCCGGAAAAGGCGCAGGATTCGCCTCCAAG...AGGCTGTGTGGTCCAGCCCATCAGTAACTGCACACCAGGGCCCTCCCTTGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000234782.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCATTAGGAGCAGCAGTGGGCGGGGTGTGGAGACAGATCCCTGAAGCTCATAGCCTGAGCCTCTGTTaGCATGGAGGAGGGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PALGAAVGGVWRQIPEAHSLSLC*HGGGAF Trigger: GAAGGCCCCTCCTCCATGGCAACAGAGGCTCAGGCT...ATGAGCTTCAGGGATCTGTCTCCACACCCCGCCCACTGCTGCTCCTAATGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR CCA 90 bp | ACCCCACTTCGTTGGGGCTTGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCTGTGGTGGGGCCAGTaGCAATCAGCAGCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TPLRWGLFFTCPQGLLSKLWWGQ*QSAAAG Trigger: TCCTGCTGCTGCTGATTGCCACTGGCCCCACCACAG...CTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACAAGCCCCAACGAAGTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGCAAGGGAGGGCCCTGGTGTGCAGTTACTGATGGGCTGGACCACACAGCCAGCGTCTCGCAGAAGTaGGAGCCACAGCCAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KGKGGPWCAVTDGLDHTASVSQK*EPQPIL Trigger: GAGAATTGGCTGTGGCTCCCACTTCTGCGAGACGCT...GGCTGTGTGGTCCAGCCCATCAGTAACTGCACACCAGGGCCCTCCCTTGCCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR CCA 90 bp | AGCTACATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCAGACAGCCCAGCGTCTCGCAGAAGTaGGAGCCACAGCCAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SYMGTQRWGALEPAGRQPSVSQK*EPQPIL Trigger: GAGAATTGGCTGTGGCTCCCACTTCTGCGAGACGCT...GGGCTGTCTGCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCACTCAGAGATGGTGCCCACCACGCTCCTaGGCTGGAAGAACTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SSPALRVCCPSYMGTQRWCPPRS*AGRTGT Trigger: GGTCCCAGTTCTTCCAGCCCAGGAGCGTGGTGGGCA...CCATCTCTGAGTGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCCAAGCTACATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCCAGCACCGGTTTCCCTaGAGCTTGGGGCTTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CCPSYMGTQRWGALEPAGQHRFP*SLGLQL Trigger: CAACTGAAGCCCCAAGCTCCAGGGAAACCGGTGCTG...GCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAGCTTGGACAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114699.9 ENSMUST00000234782.2 |
||
| 3UTR CAA 72 bp | GGCCGGGGGAGCATGACCTGCTCCAGAAGCTCTGGCTaGGAAAGAGATTCCAGAATGGGCATGAGGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRGSMTCSRSSG*ERDSRMGMRPV Trigger: GACTGGCCTCATGCCCATTCTGGAATCTCTTTCCAAGCCAGAGCTTCTGGAGCAGGTCATGCTCCCCCGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGTCCAAGCTACATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCCCATGCCCTCGTCCGTaGTGGCAAACAAGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CCPSYMGTQRWGALEPAGPCPRP*WQTSSL Trigger: GAGAGAACTTGTTTGCCATCACGGACGAGGGCATGG...GCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAGCTTGGACAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR TCA 90 bp | ACCTGTGGCTTGGCTTGGGTGGAGTGGAAGTTACCAGAAGGAATGGGATGGCTCGCCAGAGTGTTCCAGTaGGGCCTTCTGCCCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: TCGLAWVEWKLPEGMGWLARVFQ*GLLPTT Trigger: CGTGGTGGGCAGAAGGCCTCACTGGAACACTCTGGC...GAGCCATCCCATTCCTTCTGGTAACTTCCACTCCACCCAAGCCAAGCCACAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR GCA 90 bp | AGCTACATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCAGACAGCCCTCATCCCACCTCATCTaGAGCATATCTGAGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SYMGTQRWGALEPAGRQPSSHLI*SISEAG Trigger: GCCAGCCTCAGATATGCTGCAGATGAGGTGGGATGA...GGGCTGTCTGCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR GCA 90 bp | CTACATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCAGACAGCCCCTTCATCCCACCTCATCTaGAGCATATCTGAGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHGHSEMGSPRACRQTAPSSHLI*SISEAG Trigger: GCCAGCCTCAGATATGCTGCAGATGAGGTGGGATGA...AGGGGCTGTCTGCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGTCCAAGCTACATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCCTTGGAGGCGAATCCTaGGCCTTTTCCGGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CCPSYMGTQRWGALEPAGLGGES*AFSGFL Trigger: GAGAAACCCGGAAAAGGCGCAGGATTCGCCTCCAAG...GCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAGCTTGGACAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000234782.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCACTCAGAGACAGCAGGAGGAGCAGTaGCGGCGGCAACATCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSSPALRVCCPSYMGTQRQQEEQ*RRQHHP Trigger: TGGGTGATGTTGCCGCCGCCACTGCTCCTCCTGCTG...TCTCTGAGTGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGTGGCTTGGCTTGGGTGGAGTGGAAGTTACCAGAAGGAATGGGATGGCTCCAGCAGGAGGAGCAGTaGCGGCGGCAACATCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TCGLAWVEWKLPEGMGWLQQEEQ*RRQHHP Trigger: TGGGTGATGTTGCCGCCGCCACTGCTCCTCCTGCTG...GAGCCATCCCATTCCTTCTGGTAACTTCCACTCCACCCAAGCCAAGCCACAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
||
| CDS-3UTR CCA 90 bp | GAAGACAGAAGAGTTGCATGGGTGGGCAGACCAGCTTTCTCACAACACCCACCCCAGCAGGAGGAGCAGTaGCGGCGGCAACATCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: EDRRVAWVGRPAFSQHPPQQEEQ*RRQHHP Trigger: TGGGTGATGTTGCCGCCGCCACTGCTCCTCCTGCTG...GGGTGGGTGTTGTGAGAAAGCTGGTCTGCCCACCCATGCAACTCTTCTGTCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
||
| CDS-3UTR CCA 90 bp | GCAAGGGAGGGCCCTGGTGTGCAGTTACTGATGGGCTGGACCACACAGCCTTTCGAGTACCGGTTTCCCTaGAGCTTGGGGCTTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AREGPGVQLLMGWTTQPFEYRFP*SLGLQL Trigger: CAACTGAAGCCCCAAGCTCCAGGGAAACCGGTACTC...GAAAGGCTGTGTGGTCCAGCCCATCAGTAACTGCACACCAGGGCCCTCCCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR CCA 90 bp | TTGGGGCTTGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCAGAGCCTCTGTTGCCATaGAGGAGGGGCCTTCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLVLHLPSGSAVQATWAEPLLP*RRGLRL Trigger: CAACCGAAGGCCCCTCCTCCATGGCAACAGAGGCTC...TGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACAAGCCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR GCA 90 bp | AGCTACATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCAGACAGCCCCCGGAGGCTCATAGTTaGACACCAGCAAATGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SYMGTQRWGALEPAGRQPPEAHS*TPANGC Trigger: ACATCCATTTGCTGGTGTGCAACTATGAGCCTCCGG...GGGCTGTCTGCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| CDS-3UTR CCA 90 bp | CTTCTCCCTGGGAAGGCAGCAGGCACTTCAGATATTCCTTGCCTCACTCAGATGTCTGAGCGTAGGCCTTaGCGAAGGCGGCCAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPGKAAGTSDIPCLTQMSERRP*RRRPAR Trigger: ACGAGCTGGCCGCCTTCGCCAAGGCCTACGCTCAGA...CATCTGAGTGAGGCAAGGAATATCTGAAGTGCCTGCTGCCTTCCCAGGGAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| CDS-3UTR CCA 90 bp | TTGGGGCTTGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCAGCTTCTTCCACTCCCTaGAGCGTCTCGCAGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLVLHLPSGSAVQATWAASSTP*SVSQKW Trigger: CCACTTCTGCGAGACGCTCCAGGGAGTGGAAGAAGC...TGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACAAGCCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| CDS-3UTR TCA 90 bp | CCCCACTTCGTTGGGGCTTGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCTCAGTTACAAAAGCCTaGGCCTCTGTTGCCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PHFVGACSSPALRVCCPSSVTKA*ASVAME Trigger: CTCCATGGCAACAGAGGCTCAGGCTTTTGTAACTGA...GCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACAAGCCCCAACGAAGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| CDS-3UTR GCA 90 bp | CAGGGTCTGCTGTCCAAGCTACATGGGCACTCAGAGATGGGGAGCCCTAGAGCCCCGGAGGCTCATAGTTaGACACCAGCAAATGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: QGLLSKLHGHSEMGSPRAPEAHS*TPANGC Trigger: ACATCCATTTGCTGGTGTGCAACTATGAGCCTCCGG...GGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAGCTTGGACAGCAGACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| CDS-3UTR CCA 90 bp | TTGGGGCTTGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCAAGCGTCTCGCAGAAGTaGGAGCCACAGCCAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLVLHLPSGSAVQATWASVSQK*EPQPIL Trigger: GAGAATTGGCTGTGGCTCCCACTTCTGCGAGACGCT...TGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACAAGCCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| CDS-3UTR CCA 90 bp | CCCAGAATCATGTCCTCTGTAGAACTCCACTGTAAAGGGCAAGGGAGGGCCCTGGCTTCTTCCACTCCCTaGAGCGTCTCGCAGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRIMSSVELHCKGQGRALASSTP*SVSQKW Trigger: CCACTTCTGCGAGACGCTCCAGGGAGTGGAAGAAGC...CAGGGCCCTCCCTTGCCCTTTACAGTGGAGTTCTACAGAGGACATGATTCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| CDS-3UTR CCA 90 bp | GGCTCTCAGACAGGCTTTATTCAGGAGTCAAGGCTGCCTCCATTCCCTGTCTCCGCTTCTTCCACTCCCTaGAGCGTCTCGCAGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSQTGFIQESRLPPFPVSASSTP*SVSQKW Trigger: CCACTTCTGCGAGACGCTCCAGGGAGTGGAAGAAGC...GGAGACAGGGAATGGAGGCAGCCTTGACTCCTGAATAAAGCCTGTCTGAGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
||
| CDS-3UTR TCA 90 bp | CAAGGCAACCTGTGGCTTGGCTTGGGTGGAGTGGAAGTTACCAGAAGGAATGGGCCATGCCCTCGTCCGTaGTGGCAAACAAGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGNLWLGLGGVEVTRRNGPCPRP*WQTSSL Trigger: GAGAGAACTTGTTTGCCATCACGGACGAGGGCATGG...CCCATTCCTTCTGGTAACTTCCACTCCACCCAAGCCAAGCCACAGGTTGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
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| CDS-3UTR TCA 90 bp | CAGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGTCAGCCTGGTCTACAAAGCCATGCCCTCGTCCGTaGTGGCAAACAAGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QEAEAGRFLSSRSAWSTKPCPRP*WQTSSL Trigger: GAGAGAACTTGTTTGCCATCACGGACGAGGGCATGG...CTTTGTAGACCAGGCTGACCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| CDS-3UTR TCA 90 bp | GGCTCTCAGACAGGCTTTATTCAGGAGTCAAGGCTGCCTCCATTCCCTGTCTCCTGTTTCTACTGCAGGTaGGGACTCGGTTGCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSQTGFIQESRLPPFPVSCFYCR*GLGCQG Trigger: TCCCTGGCAACCGAGTCCTCACCTGCAGTAGAAACA...GGAGACAGGGAATGGAGGCAGCCTTGACTCCTGAATAAAGCCTGTCTGAGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR GCA 90 bp | TGCTGTCCAAGCTACATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCAGATCCACCATAGTTTaGTTCTCGTCCTCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CCPSYMGTQRWGALEPAGRSTIV*FSSSVR Trigger: CCTCACAGAGGACGAGAAGCAAACTATGGTGGATCT...GCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAGCTTGGACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| CDS-3UTR GCA 90 bp | AAGGGCAAGGGAGGGCCCTGGTGTGCAGTTACTGATGGGCTGGACCACACAGCCCAATTCTCTCAGTCTTaGTCCACACTACCTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGKGGPWCAVTDGLDHTAQFSQS*STLPEC Trigger: ACACTCAGGTAGTGTGGAGCAAGACTGAGAGAATTG...GGCTGTGTGGTCCAGCCCATCAGTAACTGCACACCAGGGCCCTCCCTTGCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| CDS-3UTR GCA 90 bp | TGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCACTCAGAGACTTGGAGGCGAATCCTaGGCCTTTTCCGGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSSPALRVCCPSYMGTQRLGGES*AFSGFL Trigger: GAGAAACCCGGAAAAGGCGCAGGATTCGCCTCCAAG...TCTCTGAGTGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000234782.2 |
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| CDS-3UTR CCA 90 bp | CTTGGGTGGAGTGGAAGTTACCAGAAGGAATGGGATGGCTCAGAGAGTTGGAGGGCTTCTTCCACTCCCTaGAGCGTCTCGCAGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGWSGSYQKEWDGSESWRASSTP*SVSQKW Trigger: CCACTTCTGCGAGACGCTCCAGGGAGTGGAAGAAGC...CCTCCAACTCTCTGAGCCATCCCATTCCTTCTGGTAACTTCCACTCCACCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCTTCTGCTCTTCTTCCTGCAAGGCAACCTGTGGCTTGGCTTGGGTGGACAGACAACTCGTCCTTaGGTTCAGCCTCCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFLLLFFLQGNLWLGLGGQTTRP*VQPPPG Trigger: TCCAGGAGGAGGCTGAACCCAAGGACGAGTTGTCTG...TCCACCCAAGCCAAGCCACAGGTTGCCTTGCAGGAAGAAGAGCAGAAGGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR CCA 90 bp | CCACACAGAACTTCTGGACCACTCCATTCTGATCCCCAGAGAGGTTTCTGGGCCCTGGGCTGGAAGAACTaGGACCAAAGCCTCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PHRTSGPLHSDPQRGFWALGWKN*DQSLTG Trigger: TCCAGTGAGGCTTTGGTCCCAGTTCTTCCAGCCCAG...GGCCCAGAAACCTCTCTGGGGATCAGAATGGAGTGGTCCAGAAGTTCTGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR GCA 90 bp | TCACCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCACTCAGAGATGGGGAAGATCCACCATAGTTTaGTTCTCGTCCTCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPALRVCCPSYMGTQRWGRSTIV*FSSSVR Trigger: CCTCACAGAGGACGAGAAGCAAACTATGGTGGATCT...TCCCCATCTCTGAGTGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR GCA 90 bp | TTGGGGCTTGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCACCGGAGGCTCATAGTTaGACACCAGCAAATGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LGLVLHLPSGSAVQATWAPEAHS*TPANGC Trigger: ACATCCATTTGCTGGTGTGCAACTATGAGCCTCCGG...TGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACAAGCCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGCTTGGGTGGAGTGGAAGTTACCAGAAGGAATGGGATGGCTCAGAGAGTTGGGCTGCATGTGCCTTaGAGAAACCAAGGGGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLGGVEVTRRNGMAQRVGLHVP*RNQGDL Trigger: GAGGTCCCCTTGGTTTCTGCAAGGCACATGCAGCCC...AACTCTCTGAGCCATCCCATTCCTTCTGGTAACTTCCACTCCACCCAAGCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR CCA 90 bp | TCACCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCACTCAGAGATGGGGACTGTCAGGGACATCTTaGGGTACAGCGATTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPALRVCCPSYMGTQRWGLSGTS*GTAISL Trigger: CAAAGAAATCGCTGTACCCCAAGATGTCCCTGACAG...TCCCCATCTCTGAGTGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR CCA 90 bp | ACCCACCCTACCTCATGCAAAGCACTGAGACAGGCTCTCAGACAGGCTTTATTCACCACGCTCCTGGGCTaGAAGAACTGGGACCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: THPTSCKALRQALRQALFTTLLG*KNWDQS Trigger: GCTTTGGTCCCAGTTCTTCCAGCCCAGGAGCGTGGT...GAATAAAGCCTGTCTGAGAGCCTGTCTCAGTGCTTTGCATGAGGTAGGGTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR GCA 90 bp | CCCACTTCGTTGGGGCTTGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCTCAATTCTCTCAGTCTTaGTCCACACTACCTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTSLGLVLHLPSGSAVQAQFSQS*STLPEC Trigger: ACACTCAGGTAGTGTGGAGCAAGACTGAGAGAATTG...AGCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACAAGCCCCAACGAAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| 3UTR CAA 72 bp | TCCTTCTGCTCTTCTTCCTGCAAGGCAACCTGTGGCTaGGCTTGGGTGGAGTGGAAGTTACCAGAAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SFCSSSCKATCG*AWVEWKLPEGM Trigger: CATTCCTTCTGGTAACTTCCACTCCACCCAAGCCAAGCCACAGGTTGCCTTGCAGGAAGAAGAGCAGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
||
| CDS-3UTR GCA 90 bp | TGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCACTCAGAGAAGATCCACCATAGTTTaGTTCTCGTCCTCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSSPALRVCCPSYMGTQRRSTIV*FSSSVR Trigger: CCTCACAGAGGACGAGAAGCAAACTATGGTGGATCT...TCTCTGAGTGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGGTGGAGTGGAAGTTACCAGAAGGAATGGGATGGCTCAGAGAGTTGGAGGCCGGAGGCTCATAGTTaGACACCAGCAAATGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LGWSGSYQKEWDGSESWRPEAHS*TPANGC Trigger: ACATCCATTTGCTGGTGTGCAACTATGAGCCTCCGG...CCTCCAACTCTCTGAGCCATCCCATTCCTTCTGGTAACTTCCACTCCACCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
||
| CDS-3UTR GCA 90 bp | CCACACAGAACTTCTGGACCACTCCATTCTGATCCCCAGAGAGGTTTCTGGGCCCAATTCTCTCAGTCTTaGTCCACACTACCTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PHRTSGPLHSDPQRGFWAQFSQS*STLPEC Trigger: ACACTCAGGTAGTGTGGAGCAAGACTGAGAGAATTG...GGCCCAGAAACCTCTCTGGGGATCAGAATGGAGTGGTCCAGAAGTTCTGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR GCA 90 bp | CCCAGAATCATGTCCTCTGTAGAACTCCACTGTAAAGGGCAAGGGAGGGCCCTGCAATTCTCTCAGTCTTaGTCCACACTACCTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRIMSSVELHCKGQGRALQFSQS*STLPEC Trigger: ACACTCAGGTAGTGTGGAGCAAGACTGAGAGAATTG...CAGGGCCCTCCCTTGCCCTTTACAGTGGAGTTCTACAGAGGACATGATTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR CCA 90 bp | AGATCAATGGGTGACTTCTGGGTCTTTATTGAGAGAAGTAGCCATGCTGTACTAAGCGTCTCGCAGAAGTaGGAGCCACAGCCAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSMGDFWVFIERSSHAVLSVSQK*EPQPIL Trigger: GAGAATTGGCTGTGGCTCCCACTTCTGCGAGACGCT...TAGTACAGCATGGCTACTTCTCTCAATAAAGACCCAGAAGTCACCCATTGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| 3UTR CAA 72 bp | AAATACACTCAAATAAAGATGATGGGAACACGGTACTaGTGTACTGTTACACATGAATGGAGGATGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KYTQIKMMGTRY*CTVTHEWRMEG Trigger: GCCCTCCATCCTCCATTCATGTGTAACAGTACACAAGTACCGTGTTCCCATCATCTTTATTTGAGTGTATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR CAA 90 bp | CATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCAGACAGCCCCTCCCCGGTTTCCCTGGAGCTaGGGGCTTCAGTTGCGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: HGHSEMGSPRACRQTAPPRFPWS*GLQLRG Trigger: CCCGCGCAACTGAAGCCCCAAGCTCCAGGGAAACCG...GGGAGGGGCTGTCTGCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000234782.2 |
||
| CDS-3UTR CAA 90 bp | AGCTACATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCAGACAGCCCTCTGGCGACTCGGCCTaGGGAGACTCAGCCTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SYMGTQRWGALEPAGRQPSGDSA*GDSASG Trigger: GCCCGAGGCTGAGTCTCCCAAGGCCGAGTCGCCAGA...GGGCTGTCTGCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS TCA 90 bp | CGTGCCAGTTCCCCACGGCCAGCGGCACGTCCATGCCCTCGTCCGTaGTGGCAAACAAGTTCTCTCCGCGCCGCCCGCGTTCTTTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RASSPRPAARPCPRP*WQTSSLRAARVLCC Trigger: ACAACAAAGAACGCGGGCGGCGCGGAGAGAACTTGTTTGCCATCACGGACGAGGGCATGGACGTGCCGCTGGCCGTGGGGAACTGGCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234618.2 ENSMUST00000234782.2 |
||
| CDS CCA 90 bp | TGGGACCAAAGCCTCACTGGAAAGAGGCGACTCAGCCTCTGCCTCTaGCGACTCGGCCTTGGGAGACTCAGCCTCGGGCTCCCGCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: WDQSLTGKRRLSLCL*RLGLGRLSLGLPQL Trigger: GAGTTGCGGGAGCCCGAGGCTGAGTCTCCCAAGGCCGAGTCGCCAGAGGCAGAGGCTGAGTCGCCTCTTTCCAGTGAGGCTTTGGTCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR CAA 90 bp | CTACATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCAGACAGCCCCTGGACCTCGGTCACCCTaGGAGGCGAATCCTGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LHGHSEMGSPRACRQTAPGPRSP*EANPAP Trigger: AGGCGCAGGATTCGCCTCCAAGGGTGACCGAGGTCC...AGGGGCTGTCTGCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000234782.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCAAGGGAGGGCCCTGGTGTGCAGTTACTGATGGGCTGGACCACACAGCCTGGACCTCGGTCACCCTaGGAGGCGAATCCTGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RAREGPGVQLLMGWTTQPGPRSP*EANPAP Trigger: AGGCGCAGGATTCGCCTCCAAGGGTGACCGAGGTCC...AGGCTGTGTGGTCCAGCCCATCAGTAACTGCACACCAGGGCCCTCCCTTGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000234782.2 |
||
| CDS GCA 90 bp | AAGAACTGGGACCAAAGCCTCACTGGAAAGAGGCGACTCAGCCTCTaGCTCTGGCGACTCGGCCTTGGGAGACTCAGCCTCGGGCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: KNWDQSLTGKRRLSL*LWRLGLGRLSLGLP Trigger: CGGGAGCCCGAGGCTGAGTCTCCCAAGGCCGAGTCGCCAGAGGCAGAGGCTGAGTCGCCTCTTTCCAGTGAGGCTTTGGTCCCAGTTCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS CCA 90 bp | ACTCGACCTCTGCCTCAGTCGGTGCGGCCTCTGCCTCGGGCAATATaGCCTCGGGCTCAGACAACTCGTCCTTGGGTTCAGCCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TRPLPQSVRPLPRAI*PRAQTTRPWVQPPP Trigger: AGGAGGAGGCTGAACCCAAGGACGAGTTGTCTGAGCCCGAGGCCATATTGCCCGAGGCAGAGGCCGCACCGACTGAGGCAGAGGTCGAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR CAA 90 bp | CTCAAGAAAGAGCTCAGGGAAGCCGGGCGTGGTGGCGCACATGCTCCCAGCACTCGCCCGCGTTCTTTGTaGTGGCCCCACACGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKKELREAGRGGAHAPSTRPRSL*WPHTHF Trigger: GAAGTGCGTGTGGGGCCACAACAAAGAACGCGGGCG...AGTGCTGGGAGCATGTGCGCCACCACGCCCGGCTTCCCTGAGCTCTTTCTTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR CAA 90 bp | TGCTGTCCAAGCTACATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCCGGTTTCCCTGGAGCTaGGGGCTTCAGTTGCGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: CCPSYMGTQRWGALEPAGRFPWS*GLQLRG Trigger: CCCGCGCAACTGAAGCCCCAAGCTCCAGGGAAACCG...GCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAGCTTGGACAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000234782.2 |
||
| CDS-3UTR CAA 90 bp | TGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCACTCAGAGACGCCGCCCGCGTTCTTaGTTGTGGCCCCACACGCAC | + |
|
Preference number: 5 (lower is better) Translates to: CSSPALRVCCPSYMGTQRRRPRS*LWPHTH Trigger: GTGCGTGTGGGGCCACAACAAAGAACGCGGGCGGCG...TCTCTGAGTGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR CAA 90 bp | AAGGGCAAGGGAGGGCCCTGGTGTGCAGTTACTGATGGGCTGGACCACACAGCCAGGGCTGCATGTGCCTaGCAGAAACCAAGGGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: KGKGGPWCAVTDGLDHTARAACA*QKPRGP Trigger: AGGTCCCCTTGGTTTCTGCAAGGCACATGCAGCCCT...GGCTGTGTGGTCCAGCCCATCAGTAACTGCACACCAGGGCCCTCCCTTGCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS CCA 90 bp | CCTCTGCCTCGGGCAATATGGCCTCGGGCTCAGACAACTCGTCCTTaGGTTCAGCCTCCTCCTGGATTTGGGGTACGGACTCTCCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: PLPRAIWPRAQTTRP*VQPPPGFGVRTLLT Trigger: AGTCAGGAGAGTCCGTACCCCAAATCCAGGAGGAGGCTGAACCCAAGGACGAGTTGTCTGAGCCCGAGGCCATATTGCCCGAGGCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR CAA 90 bp | TCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCACTCAGAGATGGCGCCCGCGTTCTTTGTaGTGGCCCCACACGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSPALRVCCPSYMGTQRWRPRSL*WPHTHF Trigger: GAAGTGCGTGTGGGGCCACAACAAAGAACGCGGGCG...CCATCTCTGAGTGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR CAA 90 bp | TGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCTACATGGGCACTCAGAGAGGACCTCGGTCACCCTaGGAGGCGAATCCTGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CSSPALRVCCPSYMGTQRGPRSP*EANPAP Trigger: AGGCGCAGGATTCGCCTCCAAGGGTGACCGAGGTCC...TCTCTGAGTGCCCATGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000234782.2 |
||
| CDS-3UTR CAA 90 bp | CCACACAGAACTTCTGGACCACTCCATTCTGATCCCCAGAGAGGTTTCTGGGCCCGGTTTCCCTGGAGCTaGGGGCTTCAGTTGCGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PHRTSGPLHSDPQRGFWARFPWS*GLQLRG Trigger: CCCGCGCAACTGAAGCCCCAAGCTCCAGGGAAACCG...GGCCCAGAAACCTCTCTGGGGATCAGAATGGAGTGGTCCAGAAGTTCTGTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR CAA 90 bp | ACCTGTGGCTTGGCTTGGGTGGAGTGGAAGTTACCAGAAGGAATGGGATGGCTCCGCCCGCGTTCTTTGTaGTGGCCCCACACGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TCGLAWVEWKLPEGMGWLRPRSL*WPHTHF Trigger: GAAGTGCGTGTGGGGCCACAACAAAGAACGCGGGCG...GAGCCATCCCATTCCTTCTGGTAACTTCCACTCCACCCAAGCCAAGCCACAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114701.10 ENSMUST00000155348.3 |
||
| CDS-3UTR CAA 90 bp | CCCCACTTCGTTGGGGCTTGTTCTTCACCTGCCCTCAGGGTCTGCTGTCCAAGCGTAGAGTCTCAGAGGTaGCTAGGGATGGAGTACCGG | + |
|
Preference number: 5 (lower is better) Translates to: PHFVGACSSPALRVCCPSVESQR*LGMEYR Trigger: CCGGTACTCCATCCCTAGCAACCTCTGAGACTCTAC...GCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACAAGCCCCAACGAAGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS TCA 90 bp | GAGTGTAGTGGCCGCACATCTGGTTCGGATCGCAGGTGGCCGTGCTaGAATTGTAATACTCATGCTCCTCGTGCCAGTTCCCCACGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ECSGRTSGSDRRWPC*NCNTHAPRASSPRP Trigger: TGGCCGTGGGGAACTGGCACGAGGAGCATGAGTATTACAATTTCAGCACGGCCACCTGCGATCCGAACCAGATGTGCGGCCACTACACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234618.2 ENSMUST00000234782.2 |
||
| CDS TCA 90 bp | AGCATATCTGAGGCTGGCGGGGACACCTGGGCACGGTACTGGTTGTaGAGATCCACCATAGTTTGCTTCTCGTCCTCTGTGAGGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SISEAGGDTWARYWL*RSTIVCFSSSVRAV Trigger: CACAGCCCTCACAGAGGACGAGAAGCAAACTATGGTGGATCTTCACAACCAGTACCGTGCCCAGGTGTCCCCGCCAGCCTCAGATATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS TCA 90 bp | GTCCTTGGGTTCAGCCTCCTCCTGGATTTGGGGTACGGACTCTCCTaGCTCTGTCAGGGACATCTTGGGGTACAGCGATTTCTTTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLGFSLLLDLGYGLS*LCQGHLGVQRFLWA Trigger: AGCCCAAAGAAATCGCTGTACCCCAAGATGTCCCTGACAGAGTCAGGAGAGTCCGTACCCCAAATCCAGGAGGAGGCTGAACCCAAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS GCA 90 bp | CAGGGACATCTTGGGGTACAGCGATTTCTTTGGGCTCACGGAGGTTaGGCTCGACTTGCTGGCTTCTTCGTCCATAGATTTGGGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QGHLGVQRFLWAHGG*ARLAGFFVHRFGDR Trigger: CCTGTCCCCAAATCTATGGACGAAGAAGCCAGCAAGTCGAGCGCAACCTCCGTGAGCCCAAAGAAATCGCTGTACCCCAAGATGTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR CAA 90 bp | ATCCCCTGGGAAGCAGACAAGTATCCCCAGAATCATGTCCTCTGTAGAACTCCACGCCCGCGTTCTTTGTaGTGGCCCCACACGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: IPWEADKYPQNHVLCRTPRPRSL*WPHTHF Trigger: GAAGTGCGTGTGGGGCCACAACAAAGAACGCGGGCG...TGGAGTTCTACAGAGGACATGATTCTGGGGATACTTGTCTGCTTCCCAGGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS-3UTR CAA 90 bp | TGCTGTCCAAGCTACATGGGCACTCAGAGATGGGGAGCCCTAGAGCCTGCAGGCTCTTCGTCCATAGATTaGGGGACAGGGATATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CCPSYMGTQRWGALEPAGSSSID*GTGICV Trigger: AACACATATCCCTGTCCCCAAATCTATGGACGAAGA...GCCTGCAGGCTCTAGGGCTCCCCATCTCTGAGTGCCCATGTAGCTTGGACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS GCA 90 bp | TGTGTTGATGTGAGGAAGTTAACTGGCCCTTCATCCACCGAGGGCTaGATGTGCCTTGCAGAAACCAAGGGGACCTCAGTTACAAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CVDVRKLTGPSSTEG*MCLAETKGTSVTKA Trigger: GGCTTTTGTAACTGAGGTCCCCTTGGTTTCTGCAAGGCACATGCAGCCCTCGGTGGATGAAGGGCCAGTTAACTTCCTCACATCAACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS-3UTR CAA 90 bp | TATGCACAGCGCATACAAGGATGGGTGGACCTTGAAGAGATGTTAGGTAGTCACTCTGTCAGGGACATCTaGGGGTACAGCGATTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: YAQRIQGWVDLEEMLGSHSVRDI*GYSDFF Trigger: AAAGAAATCGCTGTACCCCAAGATGTCCCTGACAGA...GTGACTACCTAACATCTCTTCAAGGTCCACCCATCCTTGTATGCGCTGTGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS GCA 72 bp | CTCGGGCTCCCGCAACTCGACCTCTGCCTCAGTCGGTaGGGCCTCTGCCTCGGGCAATATGGCCTCGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LGLPQLDLCLSR*GLCLGQYGLGL Trigger: GAGCCCGAGGCCATATTGCCCGAGGCAGAGGCCGCACCGACTGAGGCAGAGGTCGAGTTGCGGGAGCCCGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS TCA 72 bp | TCCCCACGGCCAGCGGCACGTCCATGCCCTCGTCCGTaGTGGCAAACAAGTTCTCTCCGCGCCGCCCGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: SPRPAARPCPRP*WQTSSLRAARV Trigger: AACGCGGGCGGCGCGGAGAGAACTTGTTTGCCATCACGGACGAGGGCATGGACGTGCCGCTGGCCGTGGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234618.2 ENSMUST00000234782.2 |
||
| CDS CCA 72 bp | AGCCTCACTGGAAAGAGGCGACTCAGCCTCTGCCTCTaGCGACTCGGCCTTGGGAGACTCAGCCTCGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLTGKRRLSLCL*RLGLGRLSLGL Trigger: GAGCCCGAGGCTGAGTCTCCCAAGGCCGAGTCGCCAGAGGCAGAGGCTGAGTCGCCTCTTTCCAGTGAGGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS GCA 72 bp | TTGGCGAAGGCGGCCAGCTCGTCATCCCACCTCATCTaGAGCATATCTGAGGCTGGCGGGGACACCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LAKAASSSSHLI*SISEAGGDTWA Trigger: TGCCCAGGTGTCCCCGCCAGCCTCAGATATGCTGCAGATGAGGTGGGATGACGAGCTGGCCGCCTTCGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS CAA 72 bp | TCTCAGCACCGGTTTCCCTGGAGCTTGGGGCTTCAGTaGCGCGGGTGGAAGGGACCTCGGTCACCCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SQHRFPWSLGLQ*RGWKGPRSPLE Trigger: CTCCAAGGGTGACCGAGGTCCCTTCCACCCGCGCAACTGAAGCCCCAAGCTCCAGGGAAACCGGTGCTGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114699.9 ENSMUST00000234782.2 |
||
| CDS TCA 72 bp | GGCCAGCTCGTCATCCCACCTCATCTGCAGCATATCTaGGGCTGGCGGGGACACCTGGGCACGGTACTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GQLVIPPHLQHI*GWRGHLGTVLV Trigger: AACCAGTACCGTGCCCAGGTGTCCCCGCCAGCCTCAGATATGCTGCAGATGAGGTGGGATGACGAGCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS GCA 72 bp | GACCAAAGCCTCACTGGAAAGAGGCGACTCAGCCTCTaGCTCTGGCGACTCGGCCTTGGGAGACTCAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DQSLTGKRRLSL*LWRLGLGRLSL Trigger: GAGGCTGAGTCTCCCAAGGCCGAGTCGCCAGAGGCAGAGGCTGAGTCGCCTCTTTCCAGTGAGGCTTTGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS CCA 72 bp | CTTTTCGGGGTTCTCAGCACCGGTTTCCCTGGAGCTTaGGGCTTCAGTTGCGCGGGTGGAAGGGACCTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: LFGVLSTGFPGA*GFSCAGGRDLG Trigger: ACCGAGGTCCCTTCCACCCGCGCAACTGAAGCCCCAAGCTCCAGGGAAACCGGTGCTGAGAACCCCGAAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114699.9 ENSMUST00000234782.2 |
||
| CDS CAA 72 bp | CTTCAGTTGCGCGGGTGGAAGGGACCTCGGTCACCCTaGGAGGCGAATCCTGCGCCTTTTCCGGGTTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LQLRGWKGPRSP*EANPAPFPGFS Trigger: TGAGAAACCCGGAAAAGGCGCAGGATTCGCCTCCAAGGGTGACCGAGGTCCCTTCCACCCGCGCAACTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000234782.2 |
||
| CDS GCA 72 bp | GTGGAAGGGACCTCGGTCACCCTTGGAGGCGAATCCTaGGCCTTTTCCGGGTTTCTCATGGGCTCACAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VEGTSVTLGGES*AFSGFLMGSQR Trigger: TCTCTGTGAGCCCATGAGAAACCCGGAAAAGGCGCAGGATTCGCCTCCAAGGGTGACCGAGGTCCCTTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000234782.2 |
||
| CDS CAA 72 bp | TCGGGCAATATGGCCTCGGGCTCAGACAACTCGTCCTaGGGTTCAGCCTCCTCCTGGATTTGGGGTACGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SGNMASGSDNSS*GSASSWIWGTD Trigger: GTCCGTACCCCAAATCCAGGAGGAGGCTGAACCCAAGGACGAGTTGTCTGAGCCCGAGGCCATATTGCCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS CAA 90 bp | CGGGGACACCTGGGCACGGTACTGGTTGTGAAGATCCACCATAGTTaGCTTCTCGTCCTCTGTGAGGGCTGTGGTGGGGCCAGTGGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: RGHLGTVLVVKIHHS*LLVLCEGCGGASGN Trigger: ATTGCCACTGGCCCCACCACAGCCCTCACAGAGGACGAGAAGCAAACTATGGTGGATCTTCACAACCAGTACCGTGCCCAGGTGTCCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
||
| CDS CCA 72 bp | GGCTCAGACAACTCGTCCTTGGGTTCAGCCTCCTCCTaGATTTGGGGTACGGACTCTCCTGACTCTGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSDNSSLGSASS*IWGTDSPDSVR Trigger: CCTGACAGAGTCAGGAGAGTCCGTACCCCAAATCCAGGAGGAGGCTGAACCCAAGGACGAGTTGTCTGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
||
| CDS CAA 72 bp | CTGGGCACGGTACTGGTTGTGAAGATCCACCATAGTTaGCTTCTCGTCCTCTGTGAGGGCTGTGGTGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LGTVLVVKIHHS*LLVLCEGCGGA Trigger: GGCCCCACCACAGCCCTCACAGAGGACGAGAAGCAAACTATGGTGGATCTTCACAACCAGTACCGTGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234618.2 ENSMUST00000234782.2 |
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| CDS CAA 90 bp | ATCCCACCTCTGGGCACGGTACTGGTTGTGAAGATCCACCATAGTTaGCTTCTCGTCCTCTGTGAGGGCTGTGGTGGGGCCAGTGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: IPPLGTVLVVKIHHS*LLVLCEGCGGASGN Trigger: ATTGCCACTGGCCCCACCACAGCCCTCACAGAGGACGAGAAGCAAACTATGGTGGATCTTCACAACCAGTACCGTGCCCAGAGGTGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234618.2 |
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| CDS CCA 72 bp | CTCTGTCAGGGACATCTTGGGGTACAGCGATTTCTTTaGGCTCACGGAGGTTGCGCTCGACTTGCTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LCQGHLGVQRFL*AHGGCARLAGF Trigger: GAAGCCAGCAAGTCGAGCGCAACCTCCGTGAGCCCAAAGAAATCGCTGTACCCCAAGATGTCCCTGACAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| CDS CAA 72 bp | AGGAGGGGCCTTCGGTTGCTAAGGAAGATGGTGCCTTaGTTTCTACTGCAGGTGAGGACTCGGTTGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: RRGLRLLRKMVP*FLLQVRTRLPG Trigger: CCCTGGCAACCGAGTCCTCACCTGCAGTAGAAACAAAGGCACCATCTTCCTTAGCAACCGAAGGCCCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| CDS CAA 90 bp | ACTCTCCTGACTCTGTCAGGGACATCTTGGGGTACAGCGATTTCTTaGGGCTCACGGAGGTTGCGCTCGACTTGCTGGCTTCTTCGTCCA | + |
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Preference number: 6 (lower is better) Translates to: TLLTLSGTSWGTAIS*GSRRLRSTCWLLRP Trigger: TGGACGAAGAAGCCAGCAAGTCGAGCGCAACCTCCGTGAGCCCAAAGAAATCGCTGTACCCCAAGATGTCCCTGACAGAGTCAGGAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| CDS GCA 72 bp | AACTGGCCCTTCATCCACCGAGGGCTGCATGTGCCTTaGAGAAACCAAGGGGACCTCAGTTACAAAAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: NWPFIHRGLHVP*RNQGDLSYKSL Trigger: CAGGCTTTTGTAACTGAGGTCCCCTTGGTTTCTGCAAGGCACATGCAGCCCTCGGTGGATGAAGGGCCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| CDS GCA 72 bp | GTGAGGAAGTTAACTGGCCCTTCATCCACCGAGGGCTaGATGTGCCTTGCAGAAACCAAGGGGACCTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: VRKLTGPSSTEG*MCLAETKGTSV Trigger: AACTGAGGTCCCCTTGGTTTCTGCAAGGCACATGCAGCCCTCGGTGGATGAAGGGCCAGTTAACTTCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| CDS CCA 72 bp | TTAGCTTCTTCCACTCCCTGGAGCGTCTCGCAGAAGTaGGAGCCACAGCCAATTCTCTCAGTCTTGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LASSTPWSVSQK*EPQPILSVLLH Trigger: GTGGAGCAAGACTGAGAGAATTGGCTGTGGCTCCCACTTCTGCGAGACGCTCCAGGGAGTGGAAGAAGCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114699.9 ENSMUST00000114701.10 ENSMUST00000155348.3 ENSMUST00000234782.2 |
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| CDS CAA 72 bp | ACTCTGTCAGGGACATCTTGGGGTACAGCGATTTCTTaGGGCTCACGGAGGTTGCGCTCGACTTGCTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: TLSGTSWGTAIS*GSRRLRSTCWL Trigger: AAGCCAGCAAGTCGAGCGCAACCTCCGTGAGCCCAAAGAAATCGCTGTACCCCAAGATGTCCCTGACAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| CDS TCA 72 bp | TTCAGCCTCCTCCTGGATTTGGGGTACGGACTCTCCTaGCTCTGTCAGGGACATCTTGGGGTACAGCGATTT | + |
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Preference number: 6 (lower is better) Translates to: FSLLLDLGYGLS*LCQGHLGVQRF Trigger: AAATCGCTGTACCCCAAGATGTCCCTGACAGAGTCAGGAGAGTCCGTACCCCAAATCCAGGAGGAGGCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| CDS TCA 72 bp | AGCTCGTCATCCCACCTCTGGGCACGGTACTGGTTGTaGAGATCCACCATAGTTTGCTTCTCGTCCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSSSHLWARYWL*RSTIVCFSSSV Trigger: CACAGAGGACGAGAAGCAAACTATGGTGGATCTTCACAACCAGTACCGTGCCCAGAGGTGGGATGACGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234618.2 |
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| CDS CAA 72 bp | CAGGTGAGGACTCGGTTGCCAGGGAGTCCGAGACCTTaGTTACCGAGAAATGTAGAGTCTCAGAGGTTGCTA | + |
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Preference number: 6 (lower is better) Translates to: QVRTRLPGSPRP*LPRNVESQRLL Trigger: TAGCAACCTCTGAGACTCTACATTTCTCGGTAACAAAGGTCTCGGACTCCCTGGCAACCGAGTCCTCACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| CDS CAA 90 bp | TTTCTACTGCAGGTGAGGACTCGGTTGCCAGGGAGTCCGAGACCTTaGTTACCGAGAAATGTAGAGTCTCAGAGGTTGCTAGGGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: FLLQVRTRLPGSPRP*LPRNVESQRLLGME Trigger: CTCCATCCCTAGCAACCTCTGAGACTCTACATTTCTCGGTAACAAAGGTCTCGGACTCCCTGGCAACCGAGTCCTCACCTGCAGTAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| CDS CAA 90 bp | TTACAAAAGCCTGAGCCTCTGTTGCCATGGAGGAGGGGCCTTCGGTaGCTAAGGAAGATGGTGCCTTTGTTTCTACTGCAGGTGAGGACT | + |
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Preference number: 6 (lower is better) Translates to: LQKPEPLLPWRRGLR*LRKMVPLFLLQVRT Trigger: AGTCCTCACCTGCAGTAGAAACAAAGGCACCATCTTCCTTAGCAACCGAAGGCCCCTCCTCCATGGCAACAGAGGCTCAGGCTTTTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| CDS GCA 72 bp | AAGTTAACTGGCCCTTCATCCACCGAGGGCTGCATGTaGCTTGCAGAAACCAAGGGGACCTCAGTTACAAAA | + |
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Preference number: 6 (lower is better) Translates to: KLTGPSSTEGCM*LAETKGTSVTK Trigger: TTTTGTAACTGAGGTCCCCTTGGTTTCTGCAAGGCACATGCAGCCCTCGGTGGATGAAGGGCCAGTTAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| CDS CAA 72 bp | AGACCTTTGTTACCGAGAAATGTAGAGTCTCAGAGGTaGCTAGGGATGGAGTACCGGTTTCCCTGGAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: RPLLPRNVESQR*LGMEYRFPWSL Trigger: CAAGCTCCAGGGAAACCGGTACTCCATCCCTAGCAACCTCTGAGACTCTACATTTCTCGGTAACAAAGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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| CDS CAA 72 bp | GTTGCGCTCGACTTGCTGGCTTCTTCGTCCATAGATTaGGGGACAGGGATATGTGTTGATGTGAGGAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: VALDLLASSSID*GTGICVDVRKL Trigger: TAACTTCCTCACATCAACACATATCCCTGTCCCCAAATCTATGGACGAAGAAGCCAGCAAGTCGAGCGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114701.10 |
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