Pregenerated sensors for PI15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067780Ensembl transcript IDs: ENSMUST00000088476.4
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGCCCTTGATCCTGTGAAGGCTCAATGCCCCAGTGTAGGGGAATaGCAGAACAGGGAACTGGGAGTGGGTAGGTTAGTGAGCAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: EALDPVKAQCPSVGE*QNRELGVGRLVSRG Trigger: CCCCCTGCTCACTAACCTACCCACTCCCAGTTCCCTGTTCTGGCATTCCCCTACACTGGGGCATTGAGCCTTCACAGGATCAAGGGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR GCA 90 bp | CAGATATCAATGGGAGGAGAGGCCCTTGATCCTGTGAAGGCTCAATaGCCCAGTGTAGGGGAATGCCAGAACAGGGAACTGGGAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: QISMGGEALDPVKAQ*PSVGECQNRELGVG Trigger: ACCCACTCCCAGTTCCCTGTTCTGGCATTCCCCTACACTGGGGCATTGAGCCTTCACAGGATCAAGGGCCTCTCCTCCCATTGATATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR CCA 90 bp | ACACATGGAGGGACCCATGGCTCCAGCTGCATATGTAGCAGAGGATaGCCTTGTCAGATATCAATGGGAGGAGAGGCCCTTGATCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: THGGTHGSSCICSRG*PCQISMGGEALDPV Trigger: CACAGGATCAAGGGCCTCTCCTCCCATTGATATCTGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCCATGGGTCCCTCCATGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR GCA 90 bp | AATCACCAACCAAAGAGTACACATGGAGGGACCCATGGCTCCAGCTaGATATGTAGCAGAGGATGGCCTTGTCAGATATCAATGGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: NHQPKSTHGGTHGSS*ICSRGWPCQISMGG Trigger: TCCTCCCATTGATATCTGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCCATGGGTCCCTCCATGTGTACTCTTTGGTTGGTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR CCA 90 bp | CAAATTTGTCTTTTGAAACACCAGAGGGCGCCACGGCCTGCAGCATaGTTAACACGGGTAATTTTACCTTTCAGGCCATACATCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: QICLLKHQRAPRPAA*LTRVILPFRPYISL Trigger: GAGAGAGATGTATGGCCTGAAAGGTAAAATTACCCGTGTTAACCATGCTGCAGGCCGTGGCGCCCTCTGGTGTTTCAAAAGACAAATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR GCA 90 bp | TTTAAATGTTTTAAAAGCCAAGGACAAGCCCAGTCTCACTCACTCTaGCTCCTGCCTGTAAATAAGCTCTCAACTATGGCTCCAGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: FKCFKSQGQAQSHSL*LLPVNKLSTMAPVP Trigger: AGGCACTGGAGCCATAGTTGAGAGCTTATTTACAGGCAGGAGGCAGAGTGAGTGAGACTGGGCTTGTCCTTGGCTTTTAAAACATTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR TCA 90 bp | ACAAATGCTGTAATAAGCAGCCAGGGACAAAATGAGCCCAGTGTTTaGTTCCCTTCAAAACTAGTAGATTGCCAGCACAGTCAGAGTGAA | + |
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Preference number: 1 (lower is better) Translates to: TNAVISSQGQNEPSV*FPSKLVDCQHSQSE Trigger: TTCACTCTGACTGTGCTGGCAATCTACTAGTTTTGAAGGGAATCAAACACTGGGCTCATTTTGTCCCTGGCTGCTTATTACAGCATTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR GCA 90 bp | AAATATACAAATTTGTCTTTTGAAACACCAGAGGGCGCCACGGCCTaGAGCATGGTTAACACGGGTAATTTTACCTTTCAGGCCATACAT | + |
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Preference number: 1 (lower is better) Translates to: KYTNLSFETPEGATA*SMVNTGNFTFQAIH Trigger: ATGTATGGCCTGAAAGGTAAAATTACCCGTGTTAACCATGCTGCAGGCCGTGGCGCCCTCTGGTGTTTCAAAAGACAAATTTGTATATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR CCA 90 bp | AACCCACTCACAAAAGAACACACATGGTATGCACTCACTGATAAGTaGATATTAGCCCAGAAGCTCAGTATACCCAAGATACAATTCACA | + |
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Preference number: 1 (lower is better) Translates to: NPLTKEHTWYALTDK*ILAQKLSIPKIQFT Trigger: TGTGAATTGTATCTTGGGTATACTGAGCTTCTGGGCTAATATCCACTTATCAGTGAGTGCATACCATGTGTGTTCTTTTGTGAGTGGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR TCA 90 bp | TTGTATATTGAAGCTGGAGTCTCTTGGGAAACAGGCACTTTAATGTaGGACAGTAGAGTTTACCAATTATCCTATCTGTATGTGGTTACT | + |
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Preference number: 1 (lower is better) Translates to: LYIEAGVSWETGTLM*DSRVYQLSYLYVVT Trigger: AGTAACCACATACAGATAGGATAATTGGTAAACTCTACTGTCTCACATTAAAGTGCCTGTTTCCCAAGAGACTCCAGCTTCAATATACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR CCA 90 bp | AGCATAGATGGCTCCGTGGTATATGTAACTAGTTACTATTTTATATaGTCTCCTATTACGATATGTCCTGAGCTAAGTAAAACAACAACT | + |
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Preference number: 1 (lower is better) Translates to: SIDGSVVYVTSYYFI*SPITICPELSKTTT Trigger: AGTTGTTGTTTTACTTAGCTCAGGACATATCGTAATAGGAGACCATATAAAATAGTAACTAGTTACATATACCACGGAGCCATCTATGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGACTAAATCACCAACCAAAGAGTACACATGGAGGGACCCATGGCTCCAGGGTCTTAGAATTGGATaGAACAACTGTGGGTACATA | + |
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Preference number: 2 (lower is better) Translates to: TGTKSPTKEYTWRDPWLQGLRIG*NNCGYI Trigger: TATGTACCCACAGTTGTTGCATCCAATTCTAAGACC...CTGGAGCCATGGGTCCCTCCATGTGTACTCTTTGGTTGGTGATTTAGTCCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCAGATATCAATGGGAGGATGGATGCAACAACTGTaGGTACATAGCTACATATGT | + |
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Preference number: 2 (lower is better) Translates to: GSSCICSRGWPCQISMGGWMQQL*VHSYIC Trigger: ACATATGTAGCTATGTACCCACAGTTGTTGCATCCA...TCCTCCCATTGATATCTGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR-3UTR TCA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTGCCTTGCTTCCTGCCTaGACAGCTCCAACTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: IVLVLVLPSFRKTFISSIALLPA*TAPTLH Trigger: GTGGAGAGTTGGAGCTGTTCAGGCAGGAAGCAAGGC...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR CAA 90 bp | CTGCAGCTGTGTATGGAGTTTAAATATGTAGCTTTCTTCTCCTGTTaGCCCTCTGAAAGGACCAGGCTTACTTACTTTCTAAGTCTATGC | + |
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Preference number: 2 (lower is better) Translates to: LQLCMEFKYVAFFSC*PSERTRLTYFLSLC Trigger: GCATAGACTTAGAAAGTAAGTAAGCCTGGTCCTTTCAGAGGGCAAACAGGAGAAGAAAGCTACATATTTAAACTCCATACACAGCTGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR-3UTR TCA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTGTTTGGAGCAGAGACTaGAGAAACGGCCACTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: IVLVLVLPSFRKTFISSIVWSRD*RNGHSE Trigger: CTCTGAGTGGCCGTTTCTTCAGTCTCTGCTCCAAAC...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR CAA 90 bp | GAACACATGAAGCTCAAGAAGAAGGGAGACCAAAGTGTGCATACTTaGGTCCTTCTTATAAGGGGAAACAAAATACCTATGGAAGGACAA | + |
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Preference number: 2 (lower is better) Translates to: EHMKLKKKGDQSVHT*VLLIRGNKIPMEGQ Trigger: TTGTCCTTCCATAGGTATTTTGTTTCCCCTTATAAGAAGGACCAAAGTATGCACACTTTGGTCTCCCTTCTTCTTGAGCTTCATGTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR-3UTR TCA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTCATGGACTAGCCTTCTaGAAGTGTAGGGAAGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: IVLVLVLPSFRKTFISSIHGLAF*KCREVS Trigger: GGAGACTTCCCTACACTTTCAGAAGGCTAGTCCATG...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR-3UTR GCA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTCTTTCTTCTCCTGTTTaGCCTCTGAAAGGACCAGGC | + |
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Preference number: 2 (lower is better) Translates to: IVLVLVLPSFRKTFISSILSSPV*PLKGPG Trigger: GCCTGGTCCTTTCAGAGGGCAAACAGGAGAAGAAAG...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR-3UTR TCA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTAATTCACAGAACACATaGAGCTCAAGAAGAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: IVLVLVLPSFRKTFISSINSQNT*SSRRRE Trigger: CTCCCTTCTTCTTGAGCTTCATGTGTTCTGTGAATT...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR-3UTR GCA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTATCCACCTAAGGAACTaGAGCTGTGTATGGAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: IVLVLVLPSFRKTFISSIIHLRN*SCVWSL Trigger: TAAACTCCATACACAGCTGCAGTTCCTTAGGTGGAT...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR-3UTR GCA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTTTGAAAGAGTTGTTTTaGATGCTTGAAGACCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: IVLVLVLPSFRKTFISSILKELF*MLEDPK Trigger: CTTGGGGTCTTCAAGCATGCAAAACAACTCTTTCAA...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR CAA 90 bp | AATAATAGTGCTAATCATCTTGGCTTCTGTGTTATTAAATCAAGCTaGTCTGTCATTACAAGAATGCTAAGACCACACCTGCACAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: NNSANHLGFCVIKSS*SVITRMLRPHLHSL Trigger: TAAACTGTGCAGGTGTGGTCTTAGCATTCTTGTAATGACAGACAAGCTTGATTTAATAACACAGAAGCCAAGATGATTAGCACTATTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR-3UTR CCA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTTATCCTATCTGTATGTaGTTACTATGTGTGTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: IVLVLVLPSFRKTFISSIYPICM*LLCVFP Trigger: AGGGAACACACATAGTAACCACATACAGATAGGATA...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR-3UTR CCA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTCCAGTATCCAGATTGTaGATATATCTCCTATTGAAT | + |
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Preference number: 2 (lower is better) Translates to: IVLVLVLPSFRKTFISSIPVSRL*IYLLLN Trigger: ATTCAATAGGAGATATATCCACAATCTGGATACTGG...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR GCA 72 bp | ATGGGAGGAGAGGCCCTTGATCCTGTGAAGGCTCAATaGCCCAGTGTAGGGGAATGCCAGAACAGGGAACTG | + |
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Preference number: 3 (lower is better) Translates to: MGGEALDPVKAQ*PSVGECQNREL Trigger: CAGTTCCCTGTTCTGGCATTCCCCTACACTGGGGCATTGAGCCTTCACAGGATCAAGGGCCTCTCCTCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR CCA 72 bp | GGGACCCATGGCTCCAGCTGCATATGTAGCAGAGGATaGCCTTGTCAGATATCAATGGGAGGAGAGGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: GTHGSSCICSRG*PCQISMGGEAL Trigger: AAGGGCCTCTCCTCCCATTGATATCTGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCCATGGGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR TCA 72 bp | ATGGCCTTGTCAGATATCAATGGGAGGAGAGGCCCTTaGTCCTGTGAAGGCTCAATGCCCCAGTGTAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: MALSDINGRRGP*SCEGSMPQCRG Trigger: TCCCCTACACTGGGGCATTGAGCCTTCACAGGATCAAGGGCCTCTCCTCCCATTGATATCTGACAAGGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR TCA 72 bp | GCTCTCAACTATGGCTCCAGTGCCTTGCTTCCTGCCTaGACAGCTCCAACTCTCCACCATGATGATCATGGA | + |
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Preference number: 3 (lower is better) Translates to: ALNYGSSALLPA*TAPTLHHDDHG Trigger: TCCATGATCATCATGGTGGAGAGTTGGAGCTGTTCAGGCAGGAAGCAAGGCACTGGAGCCATAGTTGAGAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR GCA 72 bp | CCAAAGAGTACACATGGAGGGACCCATGGCTCCAGCTaGATATGTAGCAGAGGATGGCCTTGTCAGATATCA | + |
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Preference number: 3 (lower is better) Translates to: PKSTHGGTHGSS*ICSRGWPCQIS Trigger: TGATATCTGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCCATGGGTCCCTCCATGTGTACTCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR TCA 72 bp | AAATACCTATGGAAGGACAAAGTTTGGAGCAGAGACTaGAGAAACGGCCACTCAGAGACTTCCCCACTTGGG | + |
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Preference number: 3 (lower is better) Translates to: KYLWKDKVWSRD*RNGHSETSPLG Trigger: CCCAAGTGGGGAAGTCTCTGAGTGGCCGTTTCTTCAGTCTCTGCTCCAAACTTTGTCCTTCCATAGGTATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR TCA 72 bp | ATTGTGAATGCCAACAAGTGCTTGCTGACAGAAGCCTaGTATAGCTATTTCCTGAGAGGCTCTGCCAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: IVNANKCLLTEA*YSYFLRGSASV Trigger: GACACTGGCAGAGCCTCTCAGGAAATAGCTATATCAGGCTTCTGTCAGCAAGCACTTGTTGGCATTCACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR GCA 72 bp | TTTAAAAGCCAAGGACAAGCCCAGTCTCACTCACTCTaGCTCCTGCCTGTAAATAAGCTCTCAACTATGGCT | + |
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Preference number: 3 (lower is better) Translates to: FKSQGQAQSHSL*LLPVNKLSTMA Trigger: AGCCATAGTTGAGAGCTTATTTACAGGCAGGAGGCAGAGTGAGTGAGACTGGGCTTGTCCTTGGCTTTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR GCA 72 bp | AATTTGTCTTTTGAAACACCAGAGGGCGCCACGGCCTaGAGCATGGTTAACACGGGTAATTTTACCTTTCAG | + |
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Preference number: 3 (lower is better) Translates to: NLSFETPEGATA*SMVNTGNFTFQ Trigger: CTGAAAGGTAAAATTACCCGTGTTAACCATGCTGCAGGCCGTGGCGCCCTCTGGTGTTTCAAAAGACAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR CCA 72 bp | AGACTGAAGAAACGGCCACTCAGAGACTTCCCCACTTaGGTATTCATCCCATATACAGTTACCAAACCCAGA | + |
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Preference number: 3 (lower is better) Translates to: RLKKRPLRDFPT*VFIPYTVTKPR Trigger: TCTGGGTTTGGTAACTGTATATGGGATGAATACCCAAGTGGGGAAGTCTCTGAGTGGCCGTTTCTTCAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR TCA 72 bp | GTAATAAGCAGCCAGGGACAAAATGAGCCCAGTGTTTaGTTCCCTTCAAAACTAGTAGATTGCCAGCACAGT | + |
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Preference number: 3 (lower is better) Translates to: VISSQGQNEPSV*FPSKLVDCQHS Trigger: ACTGTGCTGGCAATCTACTAGTTTTGAAGGGAATCAAACACTGGGCTCATTTTGTCCCTGGCTGCTTATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR TCA 72 bp | AAAGGAGCACCTGTTCACCAATGCAACTCTACAGAATaGATTGCAGCCAGCCGTCATATTTATGCTTACAAT | + |
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Preference number: 3 (lower is better) Translates to: KGAPVHQCNSTE*IAASRHIYAYN Trigger: ATTGTAAGCATAAATATGACGGCTGGCTGCAATTCATTCTGTAGAGTTGCATTGGTGAACAGGTGCTCCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR TCA 72 bp | GAAGCTGGAGTCTCTTGGGAAACAGGCACTTTAATGTaGGACAGTAGAGTTTACCAATTATCCTATCTGTAT | + |
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Preference number: 3 (lower is better) Translates to: EAGVSWETGTLM*DSRVYQLSYLY Trigger: ATACAGATAGGATAATTGGTAAACTCTACTGTCTCACATTAAAGTGCCTGTTTCCCAAGAGACTCCAGCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR-3UTR CAA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTGTAGTTTTGAAAGAGTaGTTTTGCATGCTTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: IVLVLVLPSFRKTFISSIVVLKE*FCMLED Trigger: GTCTTCAAGCATGCAAAACAACTCTTTCAAAACTAC...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR CCA 72 bp | GGCTCCGTGGTATATGTAACTAGTTACTATTTTATATaGTCTCCTATTACGATATGTCCTGAGCTAAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: GSVVYVTSYYFI*SPITICPELSK Trigger: TTTACTTAGCTCAGGACATATCGTAATAGGAGACCATATAAAATAGTAACTAGTTACATATACCACGGAGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR CCA 90 bp | ACAGGGACTAAATCACCAACCAAAGAGTACACATGGAGGGACCCATGGCTCCAGGCCCAAAGCATCGCATaGGACACCGAGGGTTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: TGTKSPTKEYTWRDPWLQAQSIA*DTEGCS Trigger: ACTGCAACCCTCGGTGTCCCATGCGATGCTTTGGGC...CTGGAGCCATGGGTCCCTCCATGTGTACTCTTTGGTTGGTGATTTAGTCCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR GCA 90 bp | ACAGGGACTAAATCACCAACCAAAGAGTACACATGGAGGGACCCATGGCTCCAGGTCCCAAATGCAAGTTaGTGCCCATGCCTCAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: TGTKSPTKEYTWRDPWLQVPNAS*CPCLSR Trigger: TCGGCTGAGGCATGGGCAGCAACTTGCATTTGGGAC...CTGGAGCCATGGGTCCCTCCATGTGTACTCTTTGGTTGGTGATTTAGTCCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR CCA 90 bp | GGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCAGATATCAATGGGAGGAGCTTCCGCCTGGCTTTaGGGATATCCGCAGACTCTA | + |
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Preference number: 4 (lower is better) Translates to: GSSCICSRGWPCQISMGGASAWL*GYPQTL Trigger: TAGAGTCTGCGGATATCCCCAAAGCCAGGCGGAAGC...TCCTCCCATTGATATCTGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR CCA 90 bp | GGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCAGATATCAATGGGAGGATGTAACGCTTCCGCCTaGCTTTGGGGATATCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: GSSCICSRGWPCQISMGGCNASA*LWGYPQ Trigger: CTGCGGATATCCCCAAAGCCAGGCGGAAGCGTTACA...TCCTCCCATTGATATCTGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR GCA 90 bp | ACAGGGACTAAATCACCAACCAAAGAGTACACATGGAGGGACCCATGGCTCCAGGCACACCAAGTACACTaGTCTTCGCCACACAGATCC | + |
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Preference number: 4 (lower is better) Translates to: TGTKSPTKEYTWRDPWLQAHQVH*SSPHRS Trigger: GGATCTGTGTGGCGAAGAGCAGTGTACTTGGTGTGC...CTGGAGCCATGGGTCCCTCCATGTGTACTCTTTGGTTGGTGATTTAGTCCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR GCA 90 bp | GGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCAGATATCAATGGGAGGACCAAATGCAAGTTGCTaGCCATGCCTCAGCCGATTT | + |
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Preference number: 4 (lower is better) Translates to: GSSCICSRGWPCQISMGGPNASC*PCLSRF Trigger: AAATCGGCTGAGGCATGGGCAGCAACTTGCATTTGG...TCCTCCCATTGATATCTGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR TCA 90 bp | ACAGGGACTAAATCACCAACCAAAGAGTACACATGGAGGGACCCATGGCTCCAGACTTGGAGGACACGATaGACATGGCACTCCAACTTT | + |
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Preference number: 4 (lower is better) Translates to: TGTKSPTKEYTWRDPWLQTWRTR*TWHSNF Trigger: AAAGTTGGAGTGCCATGTTCATCGTGTCCTCCAAGT...CTGGAGCCATGGGTCCCTCCATGTGTACTCTTTGGTTGGTGATTTAGTCCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR GCA 90 bp | GGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCAGATATCAATGGGAGGACTGGTGGGAACACTTTaGCCCGGACTTGATTATGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSCICSRGWPCQISMGGLVGTL*PGLDYD Trigger: ATCATAATCAAGTCCGGGGCAAAGTGTTCCCACCAG...TCCTCCCATTGATATCTGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR GCA 90 bp | ACAGGGACTAAATCACCAACCAAAGAGTACACATGGAGGGACCCATGGCTCCAGTGCCTCAGCCGATTTTaGAAGATTTTCATCCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TGTKSPTKEYTWRDPWLQCLSRF*KIFIPD Trigger: GTCTGGGATGAAAATCTTGCAAAATCGGCTGAGGCA...CTGGAGCCATGGGTCCCTCCATGTGTACTCTTTGGTTGGTGATTTAGTCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR CCA 90 bp | ACAGGGACTAAATCACCAACCAAAGAGTACACATGGAGGGACCCATGGCTCCAGCATGGCTTGACCAACTaGAGGATAGAGCGATATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGTKSPTKEYTWRDPWLQHGLTN*RIERYL Trigger: AAGATATCGCTCTATCCTCCAGTTGGTCAAGCCATG...CTGGAGCCATGGGTCCCTCCATGTGTACTCTTTGGTTGGTGATTTAGTCCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR CCA 90 bp | GGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCAGATATCAATGGGAGGAGACTTCATCATACCATaGCTTGACCAACTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSCICSRGWPCQISMGGDFIIP*LDQLED Trigger: ATCCTCCAGTTGGTCAAGCCATGGTATGATGAAGTC...TCCTCCCATTGATATCTGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR CCA 90 bp | GGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCAGATATCAATGGGAGGAAGTACAGGTAGTTTGTaGTTACCCCTGGAAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GSSCICSRGWPCQISMGGSTGSL*LPLEST Trigger: TGTGCTTTCCAGGGGTAACCACAAACTACCTGTACT...TCCTCCCATTGATATCTGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR GCA 90 bp | ACAGGGACTAAATCACCAACCAAAGAGTACACATGGAGGGACCCATGGCTCCAGTCCAACTTTGTATGGTaGTTCTCCTATCCAGTTACC | + |
|
Preference number: 4 (lower is better) Translates to: TGTKSPTKEYTWRDPWLQSNFVW*FSYPVT Trigger: GGTAACTGGATAGGAGAAGCACCATACAAAGTTGGA...CTGGAGCCATGGGTCCCTCCATGTGTACTCTTTGGTTGGTGATTTAGTCCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR CCA 90 bp | ACAGGGACTAAATCACCAACCAAAGAGTACACATGGAGGGACCCATGGCTCCAGGCAGAGATGAGTCAGTaGGATTTAGTAAAACGACAG | + |
|
Preference number: 4 (lower is better) Translates to: TGTKSPTKEYTWRDPWLQAEMSQ*DLVKRQ Trigger: CTGTCGTTTTACTAAATCCCACTGACTCATCTCTGC...CTGGAGCCATGGGTCCCTCCATGTGTACTCTTTGGTTGGTGATTTAGTCCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR CCA 90 bp | GGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCAGATATCAATGGGAGGATATCCAGTTACCCTTTaGAGCATAGTTGCACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: GSSCICSRGWPCQISMGGYPVTL*SIVAHQ Trigger: TTGGTGTGCAACTATGCTCCAAAGGGTAACTGGATA...TCCTCCCATTGATATCTGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR TCA 90 bp | GGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCAGATATCAATGGGAGGACGTACAGACAAATTCTaGCCCAAAAATCTCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSSCICSRGWPCQISMGGRTDKF*PKNLSK Trigger: TTTGCTGAGATTTTTGGGTCAGAATTTGTCTGTACG...TCCTCCCATTGATATCTGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR CCA 90 bp | GGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCAGATATCAATGGGAGGATATGATAATCGAGAATaGCGATCATGTCATTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSSCICSRGWPCQISMGGYDNRE*RSCHSE Trigger: CTCAGAATGACATGATCGCCATTCTCGATTATCATA...TCCTCCCATTGATATCTGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
||
| CDS-3UTR GCA 90 bp | ACAGGGACTAAATCACCAACCAAAGAGTACACATGGAGGGACCCATGGCTCCAGAATCACAAGGCTGACTaGAGAGTTCATTATCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: TGTKSPTKEYTWRDPWLQNHKAD*RVHYHF Trigger: AAAATGATAATGAACTCTGCAGTCAGCCTTGTGATT...CTGGAGCCATGGGTCCCTCCATGTGTACTCTTTGGTTGGTGATTTAGTCCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR CAA 72 bp | GCCATGCCACAACTTTTAAAAGGCCTTGCCATAGGTTaGAATATCTTCACACACACACACACACACACACAC | + |
|
Preference number: 4 (lower is better) Translates to: AMPQLLKGLAIG*NIFTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGAAGATATTCAAACCTATGGCAAGGCCTTTTAAAAGTTGTGGCATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
||
| CDS-3UTR GCA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTGCAAGTTGCTGCCCATaGCTCAGCCGATTTTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IVLVLVLPSFRKTFISSIASCCP*LSRFCK Trigger: CTTGCAAAATCGGCTGAGGCATGGGCAGCAACTTGC...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR GCA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTGTCCATGGTCCCAAATaGAAGTTGCTGCCCATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IVLVLVLPSFRKTFISSIVHGPK*KLLPMP Trigger: AGGCATGGGCAGCAACTTGCATTTGGGACCATGGAC...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
||
| CDS-3UTR CCA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTTTCCATGTTTGCTGCTaGTGGGAACACTTTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: IVLVLVLPSFRKTFISSIFHVCC*WEHFAP Trigger: CGGGGCAAAGTGTTCCCACCAGCAGCAAACATGGAA...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR CAA 72 bp | AAGCTCAAGAAGAAGGGAGACCAAAGTGTGCATACTTaGGTCCTTCTTATAAGGGGAAACAAAATACCTATG | + |
|
Preference number: 4 (lower is better) Translates to: KLKKKGDQSVHT*VLLIRGNKIPM Trigger: CATAGGTATTTTGTTTCCCCTTATAAGAAGGACCAAAGTATGCACACTTTGGTCTCCCTTCTTCTTGAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
||
| CDS-3UTR GCA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTATATTCCATGTTTGCTaGTGGTGGGAACACTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IVLVLVLPSFRKTFISSIIFHVC*WWEHFA Trigger: GGCAAAGTGTTCCCACCAGCAGCAAACATGGAATAT...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR CAA 72 bp | GCTAATCATCTTGGCTTCTGTGTTATTAAATCAAGCTaGTCTGTCATTACAAGAATGCTAAGACCACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ANHLGFCVIKSS*SVITRMLRPHL Trigger: CAGGTGTGGTCTTAGCATTCTTGTAATGACAGACAAGCTTGATTTAATAACACAGAAGCCAAGATGATTAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR TCA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTAAAGAATCACAAGGCTaGCTGCAGAGTTCATTATCA | + |
|
Preference number: 4 (lower is better) Translates to: IVLVLVLPSFRKTFISSIKESQG*LQSSLS Trigger: TGATAATGAACTCTGCAGTCAGCCTTGTGATTCTTT...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR GCA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTCATATATTCCATGTTTaGTGCTGGTGGGAACACTTT | + |
|
Preference number: 4 (lower is better) Translates to: IVLVLVLPSFRKTFISSIHIFHV*CWWEHF Trigger: AAAGTGTTCCCACCAGCAGCAAACATGGAATATATG...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR GCA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTTTGGCAAGTGTGAATTaGACATCCTATTCGATTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IVLVLVLPSFRKTFISSILASVN*TSYSIR Trigger: TCTAATCGAATAGGATGTGCAATTCACACTTGCCAA...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| 3UTR CAA 72 bp | AAAGTTATAAATAAGCTACTGGTTCTAGCTGTAGTTTaGAAAGAGTTGTTTTGCATGCTTGAAGACCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KVINKLLVLAVV*KELFCMLEDPK Trigger: CTTGGGGTCTTCAAGCATGCAAAACAACTCTTTCAAAACTACAGCTAGAACCAGTAGCTTATTTATAACTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR CAA 90 bp | GGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCAGATATCAATGGGAGGACCTGGAAAGCACAGATaGTCAGTACAGGCTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GSSCICSRGWPCQISMGGPGKHR*SVQAPP Trigger: TGGTGGAGCCTGTACTGACAATCTGTGCTTTCCAGG...TCCTCCCATTGATATCTGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR CAA 90 bp | GGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCAGATATCAATGGGAGGAACCAGTACAGGTAGTTaGTGGTTACCCCTGGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSCICSRGWPCQISMGGTSTGS*WLPLES Trigger: GCTTTCCAGGGGTAACCACAAACTACCTGTACTGGT...TCCTCCCATTGATATCTGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS GCA 90 bp | TCCTATCCAGTTACCCTTTGGAGCATAGTTGCACACCAAGTACACTaGTCTTCGCCACACAGATCCCCAGACGTTCATGTTTTGGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SYPVTLWSIVAHQVH*SSPHRSPDVHVLAS Trigger: ACTTGCCAAAACATGAACGTCTGGGGATCTGTGTGGCGAAGAGCAGTGTACTTGGTGTGCAACTATGCTCCAAAGGGTAACTGGATAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR CAA 90 bp | ACAGGGACTAAATCACCAACCAAAGAGTACACATGGAGGGACCCATGGCTCCAGATGCCTCAGCCGATTTaGCAAGATTTTCATCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TGTKSPTKEYTWRDPWLQMPQPI*QDFHPR Trigger: TCTGGGATGAAAATCTTGCAAAATCGGCTGAGGCAT...CTGGAGCCATGGGTCCCTCCATGTGTACTCTTTGGTTGGTGATTTAGTCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS GCA 90 bp | TCCATGGTCCCAAATGCAAGTTGCTGCCCATGCCTCAGCCGATTTTaGAAGATTTTCATCCCAGACCATATATTCCATGTTTGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SMVPNASCCPCLSRF*KIFIPDHIFHVCCW Trigger: CCAGCAGCAAACATGGAATATATGGTCTGGGATGAAAATCTTGCAAAATCGGCTGAGGCATGGGCAGCAACTTGCATTTGGGACCATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS CCA 90 bp | CTGGTGGGAACACTTTGCCCCGGACTTGATTATGATAATCGAGAATaGCGATCATGTCATTCTGAGAAATGTAACGCTTCCGCCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LVGTLCPGLDYDNRE*RSCHSEKCNASAWL Trigger: AAGCCAGGCGGAAGCGTTACATTTCTCAGAATGACATGATCGCCATTCTCGATTATCATAATCAAGTCCGGGGCAAAGTGTTCCCACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR CAA 90 bp | GGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTCAGATATCAATGGGAGGACACTTTGCCCCGGACTaGATTATGATAATCGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GSSCICSRGWPCQISMGGHFAPD*IMIIEN Trigger: ATTCTCGATTATCATAATCAAGTCCGGGGCAAAGTG...TCCTCCCATTGATATCTGACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS TCA 90 bp | CGACAGTATGTGCTTCACAGAGAAGGGACAAAAGAATCACAAGGCTaGCTGCAGAGTTCATTATCATTTTCAGGGATGGAGAAGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RQYVLHREGTKESQG*LQSSLSFSGMEKSS Trigger: GGAGGACTTCTCCATCCCTGAAAATGATAATGAACTCTGCAGTCAGCCTTGTGATTCTTTTGTCCCTTCTCTGTGAAGCACATACTGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS GCA 90 bp | CAGCAAATAAGAAGGTCCATGGTCCCAAATGCAAGTTGCTGCCCATaGCTCAGCCGATTTTGCAAGATTTTCATCCCAGACCATATATTC | + |
|
Preference number: 5 (lower is better) Translates to: QQIRRSMVPNASCCP*LSRFCKIFIPDHIF Trigger: GAATATATGGTCTGGGATGAAAATCTTGCAAAATCGGCTGAGGCATGGGCAGCAACTTGCATTTGGGACCATGGACCTTCTTATTTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS GCA 90 bp | AAATCTCAGCAAATAAGAAGGTCCATGGTCCCAAATGCAAGTTGCTaGCCATGCCTCAGCCGATTTTGCAAGATTTTCATCCCAGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: KSQQIRRSMVPNASC*PCLSRFCKIFIPDH Trigger: ATGGTCTGGGATGAAAATCTTGCAAAATCGGCTGAGGCATGGGCAGCAACTTGCATTTGGGACCATGGACCTTCTTATTTGCTGAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR CAA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTCGCTTCCGCCTGGCTTaGGGGATATCCGCAGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: IVLVLVLPSFRKTFISSIRFRLA*GISADS Trigger: AGAGTCTGCGGATATCCCCAAAGCCAGGCGGAAGCG...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR CAA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTTCATCATACCATGGCTaGACCAACTGGAGGATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: IVLVLVLPSFRKTFISSISSYHG*TNWRIE Trigger: CTCTATCCTCCAGTTGGTCAAGCCATGGTATGATGA...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS-3UTR CAA 90 bp | ATAGTACTGGTTTTAGTACTGCCTTCCTTTAGGAAAACTTTCATCTCATCCATTCATGGCACTCCAACTTaGTATGGTGCTTCTCCTATC | + |
|
Preference number: 5 (lower is better) Translates to: IVLVLVLPSFRKTFISSIHGTPT*YGASPI Trigger: GATAGGAGAAGCACCATACAAAGTTGGAGTGCCATG...AATGGATGAGATGAAAGTTTTCCTAAAGGAAGGCAGTACTAAAACCAGTACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS CCA 72 bp | AAGTGGCCCAAACCATCTGTGTATAATGAGTGCACATaGGCCCAAAGCATCGCATGGGACACCGAGGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: KWPKPSVYNECT*AQSIAWDTEGC Trigger: GCAACCCTCGGTGTCCCATGCGATGCTTTGGGCCCATGTGCACTCATTATACACAGATGGTTTGGGCCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS GCA 72 bp | AGAAGGTCCATGGTCCCAAATGCAAGTTGCTGCCCATaGCTCAGCCGATTTTGCAAGATTTTCATCCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RRSMVPNASCCP*LSRFCKIFIPD Trigger: GTCTGGGATGAAAATCTTGCAAAATCGGCTGAGGCATGGGCAGCAACTTGCATTTGGGACCATGGACCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS GCA 72 bp | GTTACCCTTTGGAGCATAGTTGCACACCAAGTACACTaGTCTTCGCCACACAGATCCCCAGACGTTCATGTT | + |
|
Preference number: 6 (lower is better) Translates to: VTLWSIVAHQVH*SSPHRSPDVHV Trigger: AACATGAACGTCTGGGGATCTGTGTGGCGAAGAGCAGTGTACTTGGTGTGCAACTATGCTCCAAAGGGTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS GCA 72 bp | GTGCTTCTCCTATCCAGTTACCCTTTGGAGCATAGTTaGACACCAAGTACACTGCTCTTCGCCACACAGATC | + |
|
Preference number: 6 (lower is better) Translates to: VLLLSSYPLEHS*TPSTLLFATQI Trigger: GATCTGTGTGGCGAAGAGCAGTGTACTTGGTGTGCAACTATGCTCCAAAGGGTAACTGGATAGGAGAAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS CAA 90 bp | GACTCTAGTGGTGTGCTGAGGGCGGCTTCAGTATCAGTGAAGTTATaGGCTGGCAGAGATGAGTCAGTGGGATTTAGTAAAACGACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: DSSGVLRAASVSVKL*AGRDESVGFSKTTV Trigger: TACTGTCGTTTTACTAAATCCCACTGACTCATCTCTGCCAGCCAATAACTTCACTGATACTGAAGCCGCCCTCAGCACACCACTAGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS CAA 90 bp | GTCCATGGTCCCAAATGCAAGTTGCTGCCCATGCCTCAGCCGATTTaGCAAGATTTTCATCCCAGACCATATATTCCATGTTTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VHGPKCKLLPMPQPI*QDFHPRPYIPCLLL Trigger: CAGCAGCAAACATGGAATATATGGTCTGGGATGAAAATCTTGCAAAATCGGCTGAGGCATGGGCAGCAACTTGCATTTGGGACCATGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS CAA 90 bp | CAAGTACACTGCTCTTCGCCACACAGATCCCCAGACGTTCATGTTTaGGCAAGTGTGAATTGCACATCCTATTCGATTAGAAGTGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QVHCSSPHRSPDVHV*ASVNCTSYSIRSGP Trigger: TGGGCCACTTCTAATCGAATAGGATGTGCAATTCACACTTGCCAAAACATGAACGTCTGGGGATCTGTGTGGCGAAGAGCAGTGTACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS CAA 90 bp | TTACCCCTGGAAAGCACAGATTGTCAGTACAGGCTCCACCATAACTaGGAGGACACGATGAACATGGCACTCCAACTTTGTATGGTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LPLESTDCQYRLHHN*EDTMNMALQLCMVL Trigger: AAGCACCATACAAAGTTGGAGTGCCATGTTCATCGTGTCCTCCAAGTTATGGTGGAGCCTGTACTGACAATCTGTGCTTTCCAGGGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
||
| CDS GCA 72 bp | CAGCAAATAAGAAGGTCCATGGTCCCAAATGCAAGTTaGTGCCCATGCCTCAGCCGATTTTGCAAGATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: QQIRRSMVPNAS*CPCLSRFCKIF Trigger: GAAAATCTTGCAAAATCGGCTGAGGCATGGGCAGCAACTTGCATTTGGGACCATGGACCTTCTTATTTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS CAA 72 bp | GAAAGCACAGATTGTCAGTACAGGCTCCACCATAACTaGGAGGACACGATGAACATGGCACTCCAACTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: ESTDCQYRLHHN*EDTMNMALQLC Trigger: ACAAAGTTGGAGTGCCATGTTCATCGTGTCCTCCAAGTTATGGTGGAGCCTGTACTGACAATCTGTGCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
||
| CDS GCA 72 bp | CAAATAAGAAGGTCCATGGTCCCAAATGCAAGTTGCTaGCCATGCCTCAGCCGATTTTGCAAGATTTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: QIRRSMVPNASC*PCLSRFCKIFI Trigger: GATGAAAATCTTGCAAAATCGGCTGAGGCATGGGCAGCAACTTGCATTTGGGACCATGGACCTTCTTATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
||
| CDS GCA 72 bp | AAAATCTCAGCAAATAAGAAGGTCCATGGTCCCAAATaGAAGTTGCTGCCCATGCCTCAGCCGATTTTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: KISANKKVHGPK*KLLPMPQPILQ Trigger: TTGCAAAATCGGCTGAGGCATGGGCAGCAACTTGCATTTGGGACCATGGACCTTCTTATTTGCTGAGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
||
| CDS CAA 72 bp | CATGTTTGCTGCTGGTGGGAACACTTTGCCCCGGACTaGATTATGATAATCGAGAATGGCGATCATGTCATT | + |
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Preference number: 6 (lower is better) Translates to: HVCCWWEHFAPD*IMIIENGDHVI Trigger: AATGACATGATCGCCATTCTCGATTATCATAATCAAGTCCGGGGCAAAGTGTTCCCACCAGCAGCAAACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS CAA 72 bp | CCCAAATGCAAGTTGCTGCCCATGCCTCAGCCGATTTaGCAAGATTTTCATCCCAGACCATATATTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: PKCKLLPMPQPI*QDFHPRPYIPC Trigger: ACATGGAATATATGGTCTGGGATGAAAATCTTGCAAAATCGGCTGAGGCATGGGCAGCAACTTGCATTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS CAA 72 bp | TCAGCAAATAAGAAGGTCCATGGTCCCAAATGCAAGTaGCTGCCCATGCCTCAGCCGATTTTGCAAGATTTT | + |
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Preference number: 6 (lower is better) Translates to: SANKKVHGPKCK*LPMPQPILQDF Trigger: AAAATCTTGCAAAATCGGCTGAGGCATGGGCAGCAACTTGCATTTGGGACCATGGACCTTCTTATTTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS GCA 72 bp | AGATCCCCAGACGTTCATGTTTTGGCAAGTGTGAATTaGACATCCTATTCGATTAGAAGTGGCCCAAACCAT | + |
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Preference number: 6 (lower is better) Translates to: RSPDVHVLASVN*TSYSIRSGPNH Trigger: ATGGTTTGGGCCACTTCTAATCGAATAGGATGTGCAATTCACACTTGCCAAAACATGAACGTCTGGGGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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| CDS CCA 72 bp | TTATTTAAACCAGTACAGGTAGTTTGTGGTTACCCCTaGAAAGCACAGATTGTCAGTACAGGCTCCACCATA | + |
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Preference number: 6 (lower is better) Translates to: LFKPVQVVCGYP*KAQIVSTGSTI Trigger: TATGGTGGAGCCTGTACTGACAATCTGTGCTTTCCAGGGGTAACCACAAACTACCTGTACTGGTTTAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088476.4 |
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