Pregenerated sensors for PHYKPL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020359Ensembl transcript IDs: ENSMUST00000020625.7, ENSMUST00000101250.12, ENSMUST00000167797.8
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGATGTGCCTGTGGAGGACAGATGGCCAACAGGGCTGTGCTGAGGTaGCAAGGAGCTGGGAGGTTGAGTCCTCACCTTGGGCCTATGGTT | + |
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Preference number: 1 (lower is better) Translates to: GCACGGQMANRAVLR*QGAGRLSPHLGPMV Trigger: AACCATAGGCCCAAGGTGAGGACTCAACCTCCCAGCTCCTTGTCACCTCAGCACAGCCCTGTTGGCCATCTGTCCTCCACAGGCACATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR GCA 90 bp | ACCTGGATCTCATCTGCCACAAAGAGCCCTCCGGCTCTGTGGATGTaGCTGTGGAGGACAGATGGCCAACAGGGCTGTGCTGAGGTGACA | + |
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Preference number: 1 (lower is better) Translates to: TWISSATKSPPALWM*LWRTDGQQGCAEVT Trigger: TGTCACCTCAGCACAGCCCTGTTGGCCATCTGTCCTCCACAGGCACATCCACAGAGCCGGAGGGCTCTTTGTGGCAGATGAGATCCAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR CCA 90 bp | ATCTCATCTGCCACAAAGAGCCCTCCGGCTCTGTGGATGTGCCTGTaGAGGACAGATGGCCAACAGGGCTGTGCTGAGGTGACAAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: ISSATKSPPALWMCL*RTDGQQGCAEVTRS Trigger: GCTCCTTGTCACCTCAGCACAGCCCTGTTGGCCATCTGTCCTCCACAGGCACATCCACAGAGCCGGAGGGCTCTTTGTGGCAGATGAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR GCA 90 bp | TGTAGTTGGGATTTGGAATTGACCCCAGGAAACCCAGGTACAGTTTaGCCTCCCTTGGGCAGAGCCTGCCCGTCTACTCACTCAGCCACC | + |
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Preference number: 1 (lower is better) Translates to: CSWDLELTPGNPGTV*PPLGRACPSTHSAT Trigger: GGTGGCTGAGTGAGTAGACGGGCAGGCTCTGCCCAAGGGAGGGCAAACTGTACCTGGGTTTCCTGGGGTCAATTCCAAATCCCAACTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR GCA 90 bp | CCAAAAGTGCTTGCCTATGCGGCCAAAACCAACCTGGATCTCATCTaGCACAAAGAGCCCTCCGGCTCTGTGGATGTGCCTGTGGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: PKVLAYAAKTNLDLI*HKEPSGSVDVPVED Trigger: GTCCTCCACAGGCACATCCACAGAGCCGGAGGGCTCTTTGTGGCAGATGAGATCCAGGTTGGTTTTGGCCGCATAGGCAAGCACTTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR GCA 90 bp | CAAAGTCTTCTCCCTCCAGCTGGAAGGCCCAAAAGTGCTTGCCTATaGGGCCAAAACCAACCTGGATCTCATCTGCCACAAAGAGCCCTC | + |
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Preference number: 1 (lower is better) Translates to: QSLLPPAGRPKSACL*GQNQPGSHLPQRAL Trigger: GAGGGCTCTTTGTGGCAGATGAGATCCAGGTTGGTTTTGGCCGCATAGGCAAGCACTTTTGGGCCTTCCAGCTGGAGGGAGAAGACTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR CCA 90 bp | CGGGTTTTGTTTCAGAAATTTCTGGCAGGCAGGCTGGACTGTAGTTaGGATTTGGAATTGACCCCAGGAAACCCAGGTACAGTTTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: RVLFQKFLAGRLDCS*DLELTPGNPGTVCP Trigger: AGGGCAAACTGTACCTGGGTTTCCTGGGGTCAATTCCAAATCCCAACTACAGTCCAGCCTGCCTGCCAGAAATTTCTGAAACAAAACCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR CCA 90 bp | GCTGGGAGGTTGAGTCCTCACCTTGGGCCTATGGTTGGCCTTCTCTaGGCCATTATTTCTTTACGGGTTTTGTTTCAGAAATTTCTGGCA | + |
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Preference number: 1 (lower is better) Translates to: AGRLSPHLGPMVGLL*AIISLRVLFQKFLA Trigger: TGCCAGAAATTTCTGAAACAAAACCCGTAAAGAAATAATGGCCCAGAGAAGGCCAACCATAGGCCCAAGGTGAGGACTCAACCTCCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR TCA 90 bp | GAAAACAGCAGGTGTATAGGAGGCAAAGAGGAAGCCTGGTTTCTGTaGATAGAGCTGTTGACTAGATGCTTCAGTGTTAGAGGTTATGAG | + |
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Preference number: 1 (lower is better) Translates to: ENSRCIGGKEEAWFL*IELLTRCFSVRGYE Trigger: CTCATAACCTCTAACACTGAAGCATCTAGTCAACAGCTCTATTCACAGAAACCAGGCTTCCTCTTTGCCTCCTATACACCTGCTGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGCTGGAAGGCCCAAAAGTGCTTGCCTATGCGGCCAAAACCAACCTGGATCTCCCTTGGGCAGAGCCTaGCCGTCTACTCACTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: PAGRPKSACLCGQNQPGSPLGRA*PSTHSA Trigger: GGCTGAGTGAGTAGACGGGCAGGCTCTGCCCAAGGG...AGATCCAGGTTGGTTTTGGCCGCATAGGCAAGCACTTTTGGGCCTTCCAGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTGGGAGGTTGAGTCCTCACCTTGGGCCTATGGTTGGCCTTCTCTGGGCCTCTGTCCACTCACACTaGGCAGAGACTCAGCGAAGA | + |
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Preference number: 2 (lower is better) Translates to: GAGRLSPHLGPMVGLLWASVHSH*AETQRR Trigger: TCTTCGCTGAGTCTCTGCCCAGTGTGAGTGGACAGA...GGCCCAGAGAAGGCCAACCATAGGCCCAAGGTGAGGACTCAACCTCCCAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR GCA 90 bp | AGGACTGCTAGCCCCACAGCACAGGATACGGGGTTGCCACCAAACGTGTTGAAGTGGAAGGCCCAAAAGTaGTTGCCTATGCGGCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: RTASPTAQDTGLPPNVLKWKAQK*LPMRPK Trigger: TTTTGGCCGCATAGGCAAGCACTTTTGGGCCTTCCA...CTTCAACACGTTTGGTGGCAACCCCGTATCCTGTGCTGTGGGGCTAGCAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR GCA 90 bp | ACTGCTAGCCCCACAGCACAGGATACGGGGTTGCCACCAAACGTGTTGAAGTATCTCAGCGAAGAAGGCTaGGATTCTGTAGACCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: TASPTAQDTGLPPNVLKYLSEEG*DSVDQA Trigger: AGCCTGGTCTACAGAATCGCAGCCTTCTTCGCTGAG...ATACTTCAACACGTTTGGTGGCAACCCCGTATCCTGTGCTGTGGGGCTAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR GCA 90 bp | CTCATCTTTGATGAGATCCACACCGATGAAGAGTCCAGTGCCCCTGACATCTCCCAACAGGGTGACCATTaGCGATGGACTTGCCCATGG | + |
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Preference number: 2 (lower is better) Translates to: LIFDEIHTDEESSAPDISQQGDH*RWTCPW Trigger: CCATGGGCAAGTCCATCGGCAATGGTCACCCTGTTG...GGAGATGTCAGGGGCACTGGACTCTTCATCGGTGTGGATCTCATCAAAGATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR CCA 90 bp | GAGACCAAATATTCCGCCTCTTCAGTTGCTGGTGTCCTCAGGGTCTCATCTTTGCTGTGGATGTGCCTGTaGAGGACAGATGGCCAACAG | + |
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Preference number: 2 (lower is better) Translates to: ETKYSASSVAGVLRVSSLLWMCL*RTDGQQ Trigger: CTGTTGGCCATCTGTCCTCCACAGGCACATCCACAG...CAAAGATGAGACCCTGAGGACACCAGCAACTGAAGAGGCGGAATATTTGGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGGAGGACTCTGGTCCTTCTCTAACACCCACAAGAGGCTCACAACCACCTGTTTCTACCTCCCAGTaGGATGAGACTAAAGGCATG | + |
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Preference number: 2 (lower is better) Translates to: LQEDSGPSLTPTRGSQPPVSTSQ*DETKGM Trigger: CATGCCTTTAGTCTCATCTCACTGGGAGGTAGAAAC...AGGTGGTTGTGAGCCTCTTGTGGGTGTTAGAGAAGGACCAGAGTCCTCCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
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| 3UTR-3UTR GCA 90 bp | CGTGAGCCTGGAGCTGTTCTGTTTTCAAGACATCTAGGACTGCTAGCCCCACAGAAAAGTGCTTGCCTATaGGGCCAAAACCAACCTGGA | + |
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Preference number: 2 (lower is better) Translates to: REPGAVLFSRHLGLLAPQKSACL*GQNQPG Trigger: TCCAGGTTGGTTTTGGCCGCATAGGCAAGCACTTTT...CTGTGGGGCTAGCAGTCCTAGATGTCTTGAAAACAGAACAGCTCCAGGCTCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGGAGACCAAATATTCCGCCTCTTCAGTTGCTGGTGTCCTCAGGGTCTCAAGGCTGGACTGTAGTTaGGATTTGGAATTGACCCCA | + |
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Preference number: 2 (lower is better) Translates to: SLETKYSASSVAGVLRVSRLDCS*DLELTP Trigger: TGGGGTCAATTCCAAATCCCAACTACAGTCCAGCCT...TGAGACCCTGAGGACACCAGCAACTGAAGAGGCGGAATATTTGGTCTCCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR CAA 90 bp | TTGTTTCAGAAATTTCTGGCAGGCAGGCTGGACTGTAGTTGGGATTaGGAATTGACCCCAGGAAACCCAGGTACAGTTTGCCCTCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LFQKFLAGRLDCSWD*ELTPGNPGTVCPPL Trigger: CAAGGGAGGGCAAACTGTACCTGGGTTTCCTGGGGTCAATTCCAAATCCCAACTACAGTCCAGCCTGCCTGCCAGAAATTTCTGAAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR CAA 90 bp | AAATATTCCGCCTCTTCAGTTGCTGGTGTCCTCAGGGTCTCATCTTaGATGAGATCCACACCGATGAAGAGTCCAGTGCCCCTGACATCT | + |
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Preference number: 2 (lower is better) Translates to: KYSASSVAGVLRVSS*MRSTPMKSPVPLTS Trigger: AGATGTCAGGGGCACTGGACTCTTCATCGGTGTGGATCTCATCAAAGATGAGACCCTGAGGACACCAGCAACTGAAGAGGCGGAATATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR TCA 90 bp | TTACGGGTTTTGTTTCAGAAATTTCTGGCAGGCAGGCTGGACTGTAGTTGGGATAGCCAGCAGGAGGAATaGTCTGTCCACTCACACTGG | + |
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Preference number: 2 (lower is better) Translates to: LRVLFQKFLAGRLDCSWDSQQEE*SVHSHW Trigger: CCAGTGTGAGTGGACAGATCATTCCTCCTGCTGGCT...ATCCCAACTACAGTCCAGCCTGCCTGCCAGAAATTTCTGAAACAAAACCCGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR GCA 90 bp | CAATCCAGTGAAGCCTCACACACTTGTTTTATCTGTAAGGTGGGTGTCAATCTTCCGGCTCTGTGGATGTaGCTGTGGAGGACAGATGGC | + |
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Preference number: 2 (lower is better) Translates to: QSSEASHTCFICKVGVNLPALWM*LWRTDG Trigger: GCCATCTGTCCTCCACAGGCACATCCACAGAGCCGG...AAGATTGACACCCACCTTACAGATAAAACAAGTGTGTGAGGCTTCACTGGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR CCA 90 bp | TGCATTGTCAACGTTGAAGCACATTGGGGGCTTGAACTTCAGAATATTCTTTCCAGCCCTCCGGCTCTGTaGATGTGCCTGTGGAGGACA | + |
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Preference number: 2 (lower is better) Translates to: CIVNVEAHWGLELQNILSSPPAL*MCLWRT Trigger: TGTCCTCCACAGGCACATCCACAGAGCCGGAGGGCT...GGAAAGAATATTCTGAAGTTCAAGCCCCCAATGTGCTTCAACGTTGACAATGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR TCA 90 bp | TTGTCAACGTTGAAGCACATTGGGGGCTTGAACTTCAGAATATTCTTTCCAGGGTGGCTTTCTGCTGGGTaGGGTGCTCCAGAAGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: LSTLKHIGGLNFRIFFPGWLSAG*GAPEGN Trigger: GTTTCCTTCTGGAGCACCTCACCCAGCAGAAAGCCA...CCCTGGAAAGAATATTCTGAAGTTCAAGCCCCCAATGTGCTTCAACGTTGACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR CCA 90 bp | CTTTGCTACCACATGTTGTGCATTGTCAACGTTGAAGCACATTGGGGGCTTGAATCTTCTCCCTCCAGCTaGAAGGCCCAAAAGTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: LCYHMLCIVNVEAHWGLESSPSS*KAQKCL Trigger: CAAGCACTTTTGGGCCTTCCAGCTGGAGGGAGAAGA...TTCAAGCCCCCAATGTGCTTCAACGTTGACAATGCACAACATGTGGTAGCAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR GCA 90 bp | ATGTACACCATCCTCAAAGTTTTCAGGCATAAAAGTCTGACTGGGTCTTGTTTTAAATCCGCCTGCCTCTaGCTCCCAAGTGCAGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: MYTILKVFRHKSLTGSCFKSACL*LPSAVV Trigger: GACCACTGCACTTGGGAGGCAGAGGCAGGCGGATTT...AAAACAAGACCCAGTCAGACTTTTATGCCTGAAAACTTTGAGGATGGTGTACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
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| 3UTR CAA 90 bp | ACTGTCAGTGGAAGCAAGGTAAGGTGTCAAAACTGTCACCTGCTTTaGGCTCTTGGAGGCATAGATTACATTAGACTACCTGTGAGATCC | + |
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Preference number: 2 (lower is better) Translates to: TVSGSKVRCQNCHLL*ALGGIDYIRLPVRS Trigger: GGATCTCACAGGTAGTCTAATGTAATCTATGCCTCCAAGAGCCAAAAGCAGGTGACAGTTTTGACACCTTACCTTGCTTCCACTGACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
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| 3UTR-3UTR TCA 90 bp | CAATCCAGTGAAGCCTCACACACTTGTTTTATCTGTAAGGTGGGTGTCAATCTTTGGACTTGCCCATGGTaGCAATGTCGGGAACAAAGT | + |
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Preference number: 2 (lower is better) Translates to: QSSEASHTCFICKVGVNLWTCPW*QCREQS Trigger: ACTTTGTTCCCGACATTGTCACCATGGGCAAGTCCA...AAGATTGACACCCACCTTACAGATAAAACAAGTGTGTGAGGCTTCACTGGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR TCA 90 bp | ATGTACACCATCCTCAAAGTTTTCAGGCATAAAAGTCTGACTGGGTCTTGTTTTAGACCAGGCTGGTCTTaGACTCAGAAATCCGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: MYTILKVFRHKSLTGSCFRPGWS*TQKSAA Trigger: GGCAGCGGATTTCTGAGTTCAAGACCAGCCTGGTCT...AAAACAAGACCCAGTCAGACTTTTATGCCTGAAAACTTTGAGGATGGTGTACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
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| 3UTR CAA 90 bp | GCTACCACATGTTGTGCATTGTCAACGTTGAAGCACATTGGGGGCTaGAACTTCAGAATATTCTTTCCAGGGCCATCAATGCTCAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: ATTCCALSTLKHIGG*NFRIFFPGPSMLSK Trigger: TTTACTGAGCATTGATGGCCCTGGAAAGAATATTCTGAAGTTCAAGCCCCCAATGTGCTTCAACGTTGACAATGCACAACATGTGGTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR CAA 90 bp | AGAATGTCATCCAGCTTTGCTACCACATGTTGTGCATTGTCAACGTaGAAGCACATTGGGGGCTTGAACTTCAGAATATTCTTTCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RMSSSFATTCCALST*KHIGGLNFRIFFPG Trigger: CCCTGGAAAGAATATTCTGAAGTTCAAGCCCCCAATGTGCTTCAACGTTGACAATGCACAACATGTGGTAGCAAAGCTGGATGACATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR CCA 90 bp | TTTCATACTGTCAGTGGAAGCAAGGTAAGGTGTCAAAACTGTCACCTGCTTTTGGCCTCCCAAGTGCAGTaGTCAGTTTTCTGGAACTTA | + |
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Preference number: 2 (lower is better) Translates to: FHTVSGSKVRCQNCHLLLASQVQ*SVFWNL Trigger: TAAGTTCCAGAAAACTGACCACTGCACTTGGGAGGC...CAAAAGCAGGTGACAGTTTTGACACCTTACCTTGCTTCCACTGACAGTATGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGTTGACTAGATGCTTCAGTGTTAGAGGTTATGAGACTTGCAGTGGTCTTCACTGTAGATCAGGTTaGCCTCAAACTCAGAAATCC | + |
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Preference number: 2 (lower is better) Translates to: ELLTRCFSVRGYETCSGLHCRSG*PQTQKS Trigger: GGATTTCTGAGTTTGAGGCCAACCTGATCTACAGTG...AAGACCACTGCAAGTCTCATAACCTCTAACACTGAAGCATCTAGTCAACAGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTCAACGTTGAAGCACATTGGGGGCTTGAACTTCAGAATATTCTTTCCAGGGAGTTTTCCTTTAGCCTaGAGACCAAATATTCCGCCT | + |
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Preference number: 2 (lower is better) Translates to: LSTLKHIGGLNFRIFFPGSFPLA*RPNIPP Trigger: AGGCGGAATATTTGGTCTCCAGGCTAAAGGAAAACT...CCCTGGAAAGAATATTCTGAAGTTCAAGCCCCCAATGTGCTTCAACGTTGACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR CAA 90 bp | ATGTCTGTTAGAATGTCATCCAGCTTTGCTACCACATGTTGTGCATaGTCAACGTTGAAGCACATTGGGGGCTTGAACTTCAGAATATTC | + |
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Preference number: 2 (lower is better) Translates to: MSVRMSSSFATTCCA*STLKHIGGLNFRIF Trigger: GAATATTCTGAAGTTCAAGCCCCCAATGTGCTTCAACGTTGACAATGCACAACATGTGGTAGCAAAGCTGGATGACATTCTAACAGACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR GCA 90 bp | GAGCTGTTGACTAGATGCTTCAGTGTTAGAGGTTATGAGACTTGCAGTGGTCTTCAGAGGAAGCTTTGCTaGTGTAGTCAACTCTATTTT | + |
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Preference number: 2 (lower is better) Translates to: ELLTRCFSVRGYETCSGLQRKLC*CSQLYF Trigger: AAAATAGAGTTGACTACAGCAGCAAAGCTTCCTCTG...AAGACCACTGCAAGTCTCATAACCTCTAACACTGAAGCATCTAGTCAACAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCATACTGTCAGTGGAAGCAAGGTAAGGTGTCAAAACTGTCACCTGCTTTTGATTCAGAGGAAGCTTTaGTGCTGTAGTCAACTCTAT | + |
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Preference number: 2 (lower is better) Translates to: FHTVSGSKVRCQNCHLLLIQRKL*CCSQLY Trigger: ATAGAGTTGACTACAGCAGCAAAGCTTCCTCTGAAT...CAAAAGCAGGTGACAGTTTTGACACCTTACCTTGCTTCCACTGACAGTATGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGAGCTGTTGACTAGATGCTTCAGTGTTAGAGGTTATGAGACTTGCAGTGGTCTGATAAGTTTTTCTTaGTTCAGAGGAAGCTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: IELLTRCFSVRGYETCSGLISFS*FRGSFA Trigger: AGCAAAGCTTCCTCTGAATCAAGAAAAACTTATCAG...ACCACTGCAAGTCTCATAACCTCTAACACTGAAGCATCTAGTCAACAGCTCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
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| 3UTR TCA 72 bp | TGTGGAGGACAGATGGCCAACAGGGCTGTGCTGAGGTaGCAAGGAGCTGGGAGGTTGAGTCCTCACCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: CGGQMANRAVLR*QGAGRLSPHLG Trigger: CCCAAGGTGAGGACTCAACCTCCCAGCTCCTTGTCACCTCAGCACAGCCCTGTTGGCCATCTGTCCTCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR CCA 72 bp | GATGGCCAACAGGGCTGTGCTGAGGTGACAAGGAGCTaGGAGGTTGAGTCCTCACCTTGGGCCTATGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: DGQQGCAEVTRS*EVESSPWAYGW Trigger: CCAACCATAGGCCCAAGGTGAGGACTCAACCTCCCAGCTCCTTGTCACCTCAGCACAGCCCTGTTGGCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR CAA 90 bp | TCCAGTGCCCCTGACATCTCCAATGATAGGGTGCTTGGCTTTCTGCTGGGTGAGCAAGGAGCTGGGAGGTaGAGTCCTCACCTTGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: SSAPDISNDRVLGFLLGEQGAGR*SPHLGP Trigger: AGGCCCAAGGTGAGGACTCAACCTCCCAGCTCCTTG...CTCACCCAGCAGAAAGCCAAGCACCCTATCATTGGAGATGTCAGGGGCACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR GCA 72 bp | CTTGCCTATGCGGCCAAAACCAACCTGGATCTCATCTaGCACAAAGAGCCCTCCGGCTCTGTGGATGTGCCT | + |
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Preference number: 3 (lower is better) Translates to: LAYAAKTNLDLI*HKEPSGSVDVP Trigger: AGGCACATCCACAGAGCCGGAGGGCTCTTTGTGGCAGATGAGATCCAGGTTGGTTTTGGCCGCATAGGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR-3UTR CAA 90 bp | GAGACCAAATATTCCGCCTCTTCAGTTGCTGGTGTCCTCAGGGTCTCATCTTTGACAGTTTGCCCTCCCTaGGGCAGAGCCTGCCCGTCT | + |
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Preference number: 3 (lower is better) Translates to: ETKYSASSVAGVLRVSSLTVCPP*GRACPS Trigger: AGACGGGCAGGCTCTGCCCAAGGGAGGGCAAACTGT...CAAAGATGAGACCCTGAGGACACCAGCAACTGAAGAGGCGGAATATTTGGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR TCA 72 bp | TGGCAGGCAGGCTGGACTGTAGTTGGGATTTGGAATTaGCCCCAGGAAACCCAGGTACAGTTTGCCCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: WQAGWTVVGIWN*PQETQVQFALP Trigger: AGGGAGGGCAAACTGTACCTGGGTTTCCTGGGGTCAATTCCAAATCCCAACTACAGTCCAGCCTGCCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR GCA 72 bp | CTCCCTCCAGCTGGAAGGCCCAAAAGTGCTTGCCTATaGGGCCAAAACCAACCTGGATCTCATCTGCCACAA | + |
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Preference number: 3 (lower is better) Translates to: LPPAGRPKSACL*GQNQPGSHLPQ Trigger: TTGTGGCAGATGAGATCCAGGTTGGTTTTGGCCGCATAGGCAAGCACTTTTGGGCCTTCCAGCTGGAGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR GCA 72 bp | CCCCTGACATCTCCAATGATAGGGTGCTTGGCTTTCTaGTGGGTGAGGTGCTCCAGAAGGAAACTGCCCACA | + |
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Preference number: 3 (lower is better) Translates to: PLTSPMIGCLAF*WVRCSRRKLPT Trigger: TGTGGGCAGTTTCCTTCTGGAGCACCTCACCCAGCAGAAAGCCAAGCACCCTATCATTGGAGATGTCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| 3UTR GCA 72 bp | AAGAGTCCAGTGCCCCTGACATCTCCAATGATAGGGTaGTTGGCTTTCTGCTGGGTGAGGTGCTCCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KSPVPLTSPMIG*LAFCWVRCSRR Trigger: CCTTCTGGAGCACCTCACCCAGCAGAAAGCCAAGCACCCTATCATTGGAGATGTCAGGGGCACTGGACTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| 3UTR CCA 72 bp | GCTGGACTGGAAACAGCTGGCTCTTCAGGAGGACTCTaGTCCTTCTCTAACACCCACAAGAGGCTCACAACC | + |
|
Preference number: 3 (lower is better) Translates to: AGLETAGSSGGL*SFSNTHKRLTT Trigger: GGTTGTGAGCCTCTTGTGGGTGTTAGAGAAGGACCAGAGTCCTCCTGAAGAGCCAGCTGTTTCCAGTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGGAAGGCCCAAAAGTGCTTGCCTATGCGGCCAAAACCAACCTGGATCTCAACCTTGGGCCTATGGTaGGCCTTCTCTGGGCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: SWKAQKCLPMRPKPTWISTLGLW*AFSGPL Trigger: TAATGGCCCAGAGAAGGCCAACCATAGGCCCAAGGT...TGAGATCCAGGTTGGTTTTGGCCGCATAGGCAAGCACTTTTGGGCCTTCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| 3UTR GCA 72 bp | AGTCTTCTCCCTCCAGCTGGAAGGCCCAAAAGTGCTTaGCTATGCGGCCAAAACCAACCTGGATCTCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLLPPAGRPKSA*LCGQNQPGSHL Trigger: CAGATGAGATCCAGGTTGGTTTTGGCCGCATAGGCAAGCACTTTTGGGCCTTCCAGCTGGAGGGAGAAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| 3UTR GCA 72 bp | TCAGGTTGGCCTCAAACTCAGAAATCCGCCTGCCTCTaGCTCCCAAGTGCAGTGGTCAGTTTTCTGGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: SGWPQTQKSACL*LPSAVVSFLEL Trigger: AAGTTCCAGAAAACTGACCACTGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| 3UTR CCA 72 bp | GTAATAGAATTGAAGGTGTGGCTGGCTGTGGCTGAGTaGAGCTTACTAGAGAACTGGCAGCCCACTGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: VIELKVWLAVAE*SLLENWQPTEL Trigger: GAGCTCAGTGGGCTGCCAGTTCTCTAGTAAGCTCCACTCAGCCACAGCCAGCCACACCTTCAATTCTATTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| 3UTR TCA 72 bp | AGGTGCTCCAGAAGGAAACTGCCCACATTAGTGGCGTaGGCCTGGAGCTGTTCTGTTTTCAAGACATCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: RCSRRKLPTLVA*AWSCSVFKTSR Trigger: CCTAGATGTCTTGAAAACAGAACAGCTCCAGGCTCACGCCACTAATGTGGGCAGTTTCCTTCTGGAGCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| 3UTR CCA 72 bp | CTGACATCTCCAATGATAGGGTGCTTGGCTTTCTGCTaGGTGAGGTGCTCCAGAAGGAAACTGCCCACATTA | + |
|
Preference number: 3 (lower is better) Translates to: LTSPMIGCLAFC*VRCSRRKLPTL Trigger: TAATGTGGGCAGTTTCCTTCTGGAGCACCTCACCCAGCAGAAAGCCAAGCACCCTATCATTGGAGATGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGCTACCACATGTTGTGCATTGTCAACGTTGAAGCACATTGGGGGCTTGAACCATTGCCGATGGACTaGCCCATGGTGACAATGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LCYHMLCIVNVEAHWGLEPLPMD*PMVTMS Trigger: CGACATTGTCACCATGGGCAAGTCCATCGGCAATGG...TTCAAGCCCCCAATGTGCTTCAACGTTGACAATGCACAACATGTGGTAGCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| 3UTR CCA 72 bp | AGCTTACTAGAGAACTGGCAGCCCACTGAGCTCGGGTaGGGTTCCAGAAAGATTCTTTGCCATTGTTTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SLLENWQPTELG*GSRKILCHCFW Trigger: CCAAAAACAATGGCAAAGAATCTTTCTGGAACCCCACCCGAGCTCAGTGGGCTGCCAGTTCTCTAGTAAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| 3UTR CCA 72 bp | GAGTGGTACATTAGTGGAGTAATAGAATTGAAGGTGTaGCTGGCTGTGGCTGAGTGGAGCTTACTAGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: EWYISGVIELKV*LAVAEWSLLEN Trigger: GTTCTCTAGTAAGCTCCACTCAGCCACAGCCAGCCACACCTTCAATTCTATTACTCCACTAATGTACCACTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCATTGTCAACGTTGAAGCACATTGGGGGCTTGAACTTCAGAATATTCTTTCCCTCAGGGTCTCATCTTaGATGAGATCCACACCGATG | + |
|
Preference number: 3 (lower is better) Translates to: CIVNVEAHWGLELQNILSLRVSS*MRSTPM Trigger: CATCGGTGTGGATCTCATCAAAGATGAGACCCTGAG...GGAAAGAATATTCTGAAGTTCAAGCCCCCAATGTGCTTCAACGTTGACAATGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGTAGTCAACTCTATTTTAGGCAAAGACCTAAAAGCTTCCTGGGATCCTGCAGTGGAGTAATAGAATaGAAGGTGTGGCTGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CCSQLYFRQRPKSFLGSCSGVIE*KVWLAV Trigger: CACAGCCAGCCACACCTTCAATTCTATTACTCCACT...GCAGGATCCCAGGAAGCTTTTAGGTCTTTGCCTAAAATAGAGTTGACTACAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| 3UTR TCA 72 bp | TATTACAACCTAGAACCACGCACTTTTCAACGGACCTaGTGCTCTTTGGTGGCTTCTGTAGGCACCATATAC | + |
|
Preference number: 3 (lower is better) Translates to: YYNLEPRTFQRT*CSLVASVGTIY Trigger: GTATATGGTGCCTACAGAAGCCACCAAAGAGCATCAGGTCCGTTGAAAAGTGCGTGGTTCTAGGTTGTAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGAGCTGTTGACTAGATGCTTCAGTGTTAGAGGTTATGAGACTTGCAGTGGTAGTAGTAGGAGAGCTTaGAGCCTCTATGGTAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: IELLTRCFSVRGYETCSGSSRRA*SLYGSE Trigger: TTCACTACCATAGAGGCTCAAAGCTCTCCTACTACT...ACCACTGCAAGTCTCATAACCTCTAACACTGAAGCATCTAGTCAACAGCTCTAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTACACCATCCTCAAAGTTTTCAGGCATAAAAGTCTGACTGGGTCTTGTTTTTTCCAGAAAGATTCTTaGCCATTGTTTTTGGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: MYTILKVFRHKSLTGSCFFQKDS*PLFLGV Trigger: AACTCCCAAAAACAATGGCAAAGAATCTTTCTGGAA...AAAACAAGACCCAGTCAGACTTTTATGCCTGAAAACTTTGAGGATGGTGTACAT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| 3UTR GCA 72 bp | ACTGATAAGTTTTTCTTGATTCAGAGGAAGCTTTGCTaGTGTAGTCAACTCTATTTTAGGCAAAGACCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: TDKFFLIQRKLC*CSQLYFRQRPK Trigger: TTTAGGTCTTTGCCTAAAATAGAGTTGACTACAGCAGCAAAGCTTCCTCTGAATCAAGAAAAACTTATCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CCA 90 bp | CTCCGGCTCTGTGGATGTGCCTGTGGAGGACAGATGGCCAACAGGGCTGTGCTGAGGCCTCTGCTGGGTTaGGGTGGTCCTCCCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRLCGCACGGQMANRAVLRPLLG*GGPPCK Trigger: CTTACAGGGAGGACCACCCCAACCCAGCAGAGGCCT...CAGCACAGCCCTGTTGGCCATCTGTCCTCCACAGGCACATCCACAGAGCCGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS-3UTR GCA 90 bp | CTGCCACAAAGAGCCCTCCGGCTCTGTGGATGTGCCTGTGGAGGACAGATGGCCCCTGCCCTTCTGCTGTaGACTGCTGATGACGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPQRALRLCGCACGGQMAPALLL*TADDVL Trigger: AAGCACGTCATCAGCAGTGCACAGCAGAAGGGCAGG...GGCCATCTGTCCTCCACAGGCACATCCACAGAGCCGGAGGGCTCTTTGTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS-3UTR CCA 90 bp | GAGAGATCACCGTACTGCTGCCCTGGCTGCCCTATACAAAACCAGGCTGGTCTCGGCATAGGCCTCTGCTaGGTTGGGGTGGTCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERSPYCCPGCPIQNQAGLGIGLC*VGVVLP Trigger: AGGGAGGACCACCCCAACCCAGCAGAGGCCTATGCC...GAGACCAGCCTGGTTTTGTATAGGGCAGCCAGGGCAGCAGTACGGTGATCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101250.12 ENSMUST00000167797.8 |
||
| CDS-3UTR GCA 90 bp | ATCTCATCTGCCACAAAGAGCCCTCCGGCTCTGTGGATGTGCCTGTGGAGGACAGTTGGCATAGGCCTCTaGTGGGTTGGGGTGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISSATKSPPALWMCLWRTVGIGL*WVGVVL Trigger: GAGGACCACCCCAACCCAGCAGAGGCCTATGCCAAC...TGTCCTCCACAGGCACATCCACAGAGCCGGAGGGCTCTTTGTGGCAGATGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS-3UTR GCA 90 bp | GAGAGATCACCGTACTGCTGCCCTGGCTGCCCTATACAAAACCAGGCTGGTCTCGTTGGCATAGGCCTCTaGTGGGTTGGGGTGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ERSPYCCPGCPIQNQAGLVGIGL*WVGVVL Trigger: GAGGACCACCCCAACCCAGCAGAGGCCTATGCCAAC...GAGACCAGCCTGGTTTTGTATAGGGCAGCCAGGGCAGCAGTACGGTGATCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101250.12 ENSMUST00000167797.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGATCACCGTACTGCTGCCCTGGCTGCCCTATACAAAACCAGGCTGGTCTCCCGGCTCTGTGGATGTaGTCAGCCACCTGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ERSPYCCPGCPIQNQAGLPALWM*SATWEK Trigger: CTTCTCCCAGGTGGCTGAGCACATCCACAGAGCCGG...GAGACCAGCCTGGTTTTGTATAGGGCAGCCAGGGCAGCAGTACGGTGATCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGGAAGGCCCAAAAGTGCTTGCCTATGCGGCCAAAACCAACCTGGATCTCAGCCCCGGTAGGTGTCTaGGAGAGGAGCCACATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SWKAQKCLPMRPKPTWISAPVGV*ERSHMD Trigger: GTCCATGTGGCTCCTCTCCCAGACACCTACCGGGGC...TGAGATCCAGGTTGGTTTTGGCCGCATAGGCAAGCACTTTTGGGCCTTCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS-3UTR GCA 90 bp | GAGAGATCACCGTACTGCTGCCCTGGCTGCCCTATACAAAACCAGGCTGGTCTCCCTGCCCTTCTGCTGTaGACTGCTGATGACGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ERSPYCCPGCPIQNQAGLPALLL*TADDVL Trigger: AAGCACGTCATCAGCAGTGCACAGCAGAAGGGCAGG...GAGACCAGCCTGGTTTTGTATAGGGCAGCCAGGGCAGCAGTACGGTGATCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101250.12 ENSMUST00000167797.8 |
||
| 3UTR CAA 72 bp | GGATTTGGAATTGACCCCAGGAAACCCAGGTACAGTTaGCCCTCCCTTGGGCAGAGCCTGCCCGTCTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GFGIDPRKPRYS*PSLGQSLPVYS Trigger: TGAGTAGACGGGCAGGCTCTGCCCAAGGGAGGGCAAACTGTACCTGGGTTTCCTGGGGTCAATTCCAAATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| 3UTR CAA 72 bp | CTGGCAGGCAGGCTGGACTGTAGTTGGGATTTGGAATaGACCCCAGGAAACCCAGGTACAGTTTGCCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LAGRLDCSWDLE*TPGNPGTVCPP Trigger: GGGAGGGCAAACTGTACCTGGGTTTCCTGGGGTCAATTCCAAATCCCAACTACAGTCCAGCCTGCCTGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS-3UTR CCA 90 bp | TCCAGTGCCCCTGACATCTCCAATGATAGGGTGCTTGGCTTTCTGCTGGGTGAGTGGACCCATTCCTTCTaGCCACCCAGATTCCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSAPDISNDRVLGFLLGEWTHSF*PPRFRN Trigger: GTTCCGGAATCTGGGTGGCCAGAAGGAATGGGTCCA...CTCACCCAGCAGAAAGCCAAGCACCCTATCATTGGAGATGTCAGGGGCACTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS-3UTR TCA 90 bp | GAGACCAAATATTCCGCCTCTTCAGTTGCTGGTGTCCTCAGGGTCTCATCTTTGGTCTGCAGGAAGAGCTaGGCAGCCGACGTCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETKYSASSVAGVLRVSSLVCRKS*AADVSG Trigger: ACCTGAGACGTCGGCTGCTCAGCTCTTCCTGCAGAC...CAAAGATGAGACCCTGAGGACACCAGCAACTGAAGAGGCGGAATATTTGGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS-3UTR CCA 90 bp | AGGACTGCTAGCCCCACAGCACAGGATACGGGGTTGCCACCAAACGTGTTGAAGCTGTCTCCCAAGTGCTaGATTAAAGGCATGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RTASPTAQDTGLPPNVLKLSPKC*IKGMLH Trigger: GTGGAGCATGCCTTTAATCCAGCACTTGGGAGACAG...CTTCAACACGTTTGGTGGCAACCCCGTATCCTGTGCTGTGGGGCTAGCAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| 3UTR CAA 72 bp | AGTCCAGTGCCCCTGACATCTCCAATGATAGGGTGCTaGGCTTTCTGCTGGGTGAGGTGCTCCAGAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPVPLTSPMIGC*AFCWVRCSRRK Trigger: TTTCCTTCTGGAGCACCTCACCCAGCAGAAAGCCAAGCACCCTATCATTGGAGATGTCAGGGGCACTGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| 3UTR CAA 72 bp | AAGTCTTCTCCCTCCAGCTGGAAGGCCCAAAAGTGCTaGCCTATGCGGCCAAAACCAACCTGGATCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KSSPSSWKAQKC*PMRPKPTWISS Trigger: AGATGAGATCCAGGTTGGTTTTGGCCGCATAGGCAAGCACTTTTGGGCCTTCCAGCTGGAGGGAGAAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| 3UTR CAA 72 bp | TCTAGGACTGCTAGCCCCACAGCACAGGATACGGGGTaGCCACCAAACGTGTTGAAGTATTCTACACCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SRTASPTAQDTG*PPNVLKYSTPV Trigger: TACCGGTGTAGAATACTTCAACACGTTTGGTGGCAACCCCGTATCCTGTGCTGTGGGGCTAGCAGTCCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS-3UTR TCA 90 bp | GGAGTAATAGAATTGAAGGTGTGGCTGGCTGTGGCTGAGTGGAGCTTACTAGAGAGCCAGCAGGAGGAATaGTCTGTCCACTCACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVIELKVWLAVAEWSLLESQQEE*SVHSHW Trigger: CCAGTGTGAGTGGACAGATCATTCCTCCTGCTGGCT...CTCTAGTAAGCTCCACTCAGCCACAGCCAGCCACACCTTCAATTCTATTACTCC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTAATAGAATTGAAGGTGTGGCTGGCTGTGGCTGAGTGGAGCTTACTAGAGAACCTGGATCTCATCTaGCACAAAGAGCCCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVIELKVWLAVAEWSLLENLDLI*HKEPSG Trigger: GCCGGAGGGCTCTTTGTGGCAGATGAGATCCAGGTT...CTCTAGTAAGCTCCACTCAGCCACAGCCAGCCACACCTTCAATTCTATTACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGATCACCGTACTGCTGCCCTGGCTGCCCTATACAAAACCAGGCTGGTCTCTACAGGTACTGCCCTTaGCCTCGGATAATCTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: ERSPYCCPGCPIQNQAGLYRYCP*PRIILT Trigger: TGTTAAGATTATCCGAGGCCAAGGGCAGTACCTGTA...GAGACCAGCCTGGTTTTGTATAGGGCAGCCAGGGCAGCAGTACGGTGATCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101250.12 ENSMUST00000167797.8 |
||
| CDS-3UTR CCA 90 bp | CACCGTACTGCTGCCCTGGCTGCCCTATACAAAACCAGGCTGGTCTCAAACTTAAATACCACCACATCCTaGTGTCCCGTGTACTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: HRTAALAALYKTRLVSNLNTTTS*CPVYCR Trigger: TCGACAGTACACGGGACACCAGGATGTGGTGGTATT...TAAGTTTGAGACCAGCCTGGTTTTGTATAGGGCAGCCAGGGCAGCAGTACGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101250.12 ENSMUST00000167797.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTGTTGACTAGATGCTTCAGTGTTAGAGGTTATGAGACTTGCAGTGGTCTTGCCCCGGTAGGTGTCTaGGAGAGGAGCCACATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ELLTRCFSVRGYETCSGLAPVGV*ERSHMD Trigger: GTCCATGTGGCTCCTCTCCCAGACACCTACCGGGGC...AAGACCACTGCAAGTCTCATAACCTCTAACACTGAAGCATCTAGTCAACAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTAGTCAACTCTATTTTAGGCAAAGACCTAAAAGCTTCCTGGGATCCTGCGTCTGCAGGAAGAGCTaGGCAGCCGACGTCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CCSQLYFRQRPKSFLGSCVCRKS*AADVSG Trigger: ACCTGAGACGTCGGCTGCTCAGCTCTTCCTGCAGAC...GCAGGATCCCAGGAAGCTTTTAGGTCTTTGCCTAAAATAGAGTTGACTACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGATCACCGTACTGCTGCCCTGGCTGCCCTATACAAAACCAGGCTGGTCTCAGCACATTGGGGGCTTaGACTTCAGAATATTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ERSPYCCPGCPIQNQAGLSTLGA*TSEYSF Trigger: GAAAGAATATTCTGAAGTTCAAGCCCCCAATGTGCT...GAGACCAGCCTGGTTTTGTATAGGGCAGCCAGGGCAGCAGTACGGTGATCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CCA 90 bp | TTTCATACTGTCAGTGGAAGCAAGGTAAGGTGTCAAAACTGTCACCTGCTTTTGAGCCCTCCGGCTCTGTaGATGTGCTCAGCCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHTVSGSKVRCQNCHLLLSPPAL*MCSATW Trigger: CCAGGTGGCTGAGCACATCCACAGAGCCGGAGGGCT...CAAAAGCAGGTGACAGTTTTGACACCTTACCTTGCTTCCACTGACAGTATGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| 3UTR CAA 72 bp | CCCACAGCACAGGATACGGGGTTGCCACCAAACGTGTaGAAGTATTCTACACCGGTAGCTTCAAATGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PTAQDTGLPPNV*KYSTPVASNAL Trigger: AAGGGCATTTGAAGCTACCGGTGTAGAATACTTCAACACGTTTGGTGGCAACCCCGTATCCTGTGCTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS-3UTR TCA 90 bp | GGAGTAATAGAATTGAAGGTGTGGCTGGCTGTGGCTGAGTGGAGCTTACTAGAGTGGACTTGCCCATGGTaGCAATGTCGGGAACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVIELKVWLAVAEWSLLEWTCPW*QCREQS Trigger: ACTTTGTTCCCGACATTGTCACCATGGGCAAGTCCA...CTCTAGTAAGCTCCACTCAGCCACAGCCAGCCACACCTTCAATTCTATTACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGAGACCAAATATTCCGCCTCTTCAGTTGCTGGTGTCCTCAGGGTCTCATACAGGTACTGCCCTTaGCCTCGGATAATCTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: SLETKYSASSVAGVLRVSYRYCP*PRIILT Trigger: TGTTAAGATTATCCGAGGCCAAGGGCAGTACCTGTA...TGAGACCCTGAGGACACCAGCAACTGAAGAGGCGGAATATTTGGTCTCCAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS-3UTR CCA 90 bp | TTTCATACTGTCAGTGGAAGCAAGGTAAGGTGTCAAAACTGTCACCTGCTTTTGAGGCCTCTGCTGGGTTaGGGTGGTCCTCCCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FHTVSGSKVRCQNCHLLLRPLLG*GGPPCK Trigger: CTTACAGGGAGGACCACCCCAACCCAGCAGAGGCCT...CAAAAGCAGGTGACAGTTTTGACACCTTACCTTGCTTCCACTGACAGTATGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGGATCTCATCTGCCACAAAGAGCCCTCCGGCTCTGTGGATGTGCCTGTGGGTCATCTTGGGAAATTaGTTCTTTAGAACTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TWISSATKSPPALWMCLWVILGN*FFRTVF Trigger: GAAGACAGTTCTAAAGAACCAATTTCCCAAGATGAC...CCACAGGCACATCCACAGAGCCGGAGGGCTCTTTGTGGCAGATGAGATCCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| 3UTR CAA 72 bp | AAATTTCTGGCAGGCAGGCTGGACTGTAGTTGGGATTaGGAATTGACCCCAGGAAACCCAGGTACAGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KFLAGRLDCSWD*ELTPGNPGTVC Trigger: GCAAACTGTACCTGGGTTTCCTGGGGTCAATTCCAAATCCCAACTACAGTCCAGCCTGCCTGCCAGAAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS-3UTR TCA 90 bp | GAGACCAAATATTCCGCCTCTTCAGTTGCTGGTGTCCTCAGGGTCTCATCTTTGCAGGTCGTTGGCTTCTaGCCCAGAATTCAAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ETKYSASSVAGVLRVSSLQVVGF*PRIQEV Trigger: TACTTCTTGAATTCTGGGTCAGAAGCCAACGACCTG...CAAAGATGAGACCCTGAGGACACCAGCAACTGAAGAGGCGGAATATTTGGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS-3UTR TCA 90 bp | TGCTGTAGTCAACTCTATTTTAGGCAAAGACCTAAAAGCTTCCTGGGATCCTGCCCCACATTAGTGGCGTaGGCCTGGAGCTGTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CCSQLYFRQRPKSFLGSCPTLVA*AWSCSV Trigger: AACAGAACAGCTCCAGGCTCACGCCACTAATGTGGG...GCAGGATCCCAGGAAGCTTTTAGGTCTTTGCCTAAAATAGAGTTGACTACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTGTTGACTAGATGCTTCAGTGTTAGAGGTTATGAGACTTGCAGTGGTCTTTGGCTTTCTGCTGGGTaGGGTGCTCCAGAAGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ELLTRCFSVRGYETCSGLWLSAG*GAPEGN Trigger: GTTTCCTTCTGGAGCACCTCACCCAGCAGAAAGCCA...AAGACCACTGCAAGTCTCATAACCTCTAACACTGAAGCATCTAGTCAACAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTAATAGAATTGAAGGTGTGGCTGGCTGTGGCTGAGTGGAGCTTACTAGAGAAAAGTGCTTGCCTATaGGGCCAAAACCAACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVIELKVWLAVAEWSLLEKSACL*GQNQPG Trigger: TCCAGGTTGGTTTTGGCCGCATAGGCAAGCACTTTT...CTCTAGTAAGCTCCACTCAGCCACAGCCAGCCACACCTTCAATTCTATTACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAGTATGTCAGGTCTGTCTTTAAAACATGTTCTTTTGAAGCATGTACACCAGGCATAGGCCTCTGCTaGGTTGGGGTGGTCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WEYVRSVFKTCSFEACTPGIGLC*VGVVLP Trigger: AGGGAGGACCACCCCAACCCAGCAGAGGCCTATGCC...TGGTGTACATGCTTCAAAAGAACATGTTTTAAAGACAGACCTGACATACTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000101250.12 ENSMUST00000167797.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAGGAGGACTCTGGTCCTTCTCTAACACCCACAAGAGGCTCACAACCACCTAGTTTTCCTTTAGCCTaGAGACCAAATATTCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQEDSGPSLTPTRGSQPPSFPLA*RPNIPP Trigger: AGGCGGAATATTTGGTCTCCAGGCTAAAGGAAAACT...AGGTGGTTGTGAGCCTCTTGTGGGTGTTAGAGAAGGACCAGAGTCCTCCTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTTAGCCTGGAGACCAAATATTCCGCCTCTTCAGTTGCTGGTGTCCTCAGGAGGCATGCTCCACTATaGTCATCTTGGGAAATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFSLETKYSASSVAGVLRRHAPL*SSWEIG Trigger: ACCAATTTCCCAAGATGACCATAGTGGAGCATGCCT...CCTGAGGACACCAGCAACTGAAGAGGCGGAATATTTGGTCTCCAGGCTAAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS-3UTR GCA 90 bp | TTTCATACTGTCAGTGGAAGCAAGGTAAGGTGTCAAAACTGTCACCTGCTTTTGCAACAGGGTGACCATTaGCGATGGACTTGCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: FHTVSGSKVRCQNCHLLLQQGDH*RWTCPW Trigger: CCATGGGCAAGTCCATCGGCAATGGTCACCCTGTTG...CAAAAGCAGGTGACAGTTTTGACACCTTACCTTGCTTCCACTGACAGTATGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR GCA 90 bp | ATAGAGCTGTTGACTAGATGCTTCAGTGTTAGAGGTTATGAGACTTGCAGTGGTTTCCGCCTCTTCAGTTaGTGGTGTCCTCAGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IELLTRCFSVRGYETCSGFRLFS*WCPQGL Trigger: GAGACCCTGAGGACACCAGCAACTGAAGAGGCGGAA...ACCACTGCAAGTCTCATAACCTCTAACACTGAAGCATCTAGTCAACAGCTCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTGTTGACTAGATGCTTCAGTGTTAGAGGTTATGAGACTTGCAGTGGTCTTTGGAAGGCCCAAAAGTaGTTGCCTATGCGGCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ELLTRCFSVRGYETCSGLWKAQK*LPMRPK Trigger: TTTTGGCCGCATAGGCAAGCACTTTTGGGCCTTCCA...AAGACCACTGCAAGTCTCATAACCTCTAACACTGAAGCATCTAGTCAACAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR GCA 90 bp | ATGTACACCATCCTCAAAGTTTTCAGGCATAAAAGTCTGACTGGGTCTTGTTTTGGGTGCTTGGCTTTCTaGTGGGTGAGGTGCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MYTILKVFRHKSLTGSCFGCLAF*WVRCSR Trigger: TCTGGAGCACCTCACCCAGCAGAAAGCCAAGCACCC...AAAACAAGACCCAGTCAGACTTTTATGCCTGAAAACTTTGAGGATGGTGTACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CCA 90 bp | TTTCATACTGTCAGTGGAAGCAAGGTAAGGTGTCAAAACTGTCACCTGCTTTTGTCTTCTCCCTCCAGCTaGAAGGCCCAAAAGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FHTVSGSKVRCQNCHLLLSSPSS*KAQKCL Trigger: CAAGCACTTTTGGGCCTTCCAGCTGGAGGGAGAAGA...CAAAAGCAGGTGACAGTTTTGACACCTTACCTTGCTTCCACTGACAGTATGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| 3UTR CAA 72 bp | GTTGGCCTTCTCTGGGCCATTATTTCTTTACGGGTTTaGTTTCAGAAATTTCTGGCAGGCAGGCTGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGLLWAIISLRV*FQKFLAGRLDC Trigger: ACAGTCCAGCCTGCCTGCCAGAAATTTCTGAAACAAAACCCGTAAAGAAATAATGGCCCAGAGAAGGCCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS-3UTR TCA 90 bp | GAGCTGTTGACTAGATGCTTCAGTGTTAGAGGTTATGAGACTTGCAGTGGTCTTCAGGTCGTTGGCTTCTaGCCCAGAATTCAAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ELLTRCFSVRGYETCSGLQVVGF*PRIQEV Trigger: TACTTCTTGAATTCTGGGTCAGAAGCCAACGACCTG...AAGACCACTGCAAGTCTCATAACCTCTAACACTGAAGCATCTAGTCAACAGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CCA 90 bp | TTTCATACTGTCAGTGGAAGCAAGGTAAGGTGTCAAAACTGTCACCTGCTTTTGCGGCCAAAACCAACCTaGATCTCATCTGCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FHTVSGSKVRCQNCHLLLRPKPT*ISSATK Trigger: CTTTGTGGCAGATGAGATCCAGGTTGGTTTTGGCCG...CAAAAGCAGGTGACAGTTTTGACACCTTACCTTGCTTCCACTGACAGTATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CCA 90 bp | CTCATCTTTGATGAGATCCACACCGATGAAGAGTCCAGTGCCCCTGACATCTCCCCACTATGGTCATCTTaGGAAATTGGTTCTTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LIFDEIHTDEESSAPDISPLWSS*EIGSLE Trigger: TTCTAAAGAACCAATTTCCCAAGATGACCATAGTGG...GGAGATGTCAGGGGCACTGGACTCTTCATCGGTGTGGATCTCATCAAAGATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| 3UTR CAA 72 bp | AGAATGTCATCCAGCTTTGCTACCACATGTTGTGCATaGTCAACGTTGAAGCACATTGGGGGCTTGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RMSSSFATTCCA*STLKHIGGLNF Trigger: GAAGTTCAAGCCCCCAATGTGCTTCAACGTTGACAATGCACAACATGTGGTAGCAAAGCTGGATGACATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| 3UTR CAA 72 bp | TGTTTAGTGGAGTGGTACATTAGTGGAGTAATAGAATaGAAGGTGTGGCTGGCTGTGGCTGAGTGGAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: CLVEWYISGVIE*KVWLAVAEWSL Trigger: TAAGCTCCACTCAGCCACAGCCAGCCACACCTTCAATTCTATTACTCCACTAATGTACCACTCCACTAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR TCA 90 bp | ATGTACACCATCCTCAAAGTTTTCAGGCATAAAAGTCTGACTGGGTCTTGTTTTGGAACTTGTAGGGACTaGTGTCGATCAGGGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MYTILKVFRHKSLTGSCFGTCRD*CRSGSS Trigger: TGAGCTCCCTGATCGACATCAGTCCCTACAAGTTCC...AAAACAAGACCCAGTCAGACTTTTATGCCTGAAAACTTTGAGGATGGTGTACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000101250.12 ENSMUST00000167797.8 |
||
| CDS-3UTR CCA 90 bp | ATGTACACCATCCTCAAAGTTTTCAGGCATAAAAGTCTGACTGGGTCTTGTTTTTCTGTCCACTCACACTaGGCAGAGACTCAGCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: MYTILKVFRHKSLTGSCFSVHSH*AETQRR Trigger: TCTTCGCTGAGTCTCTGCCCAGTGTGAGTGGACAGA...AAAACAAGACCCAGTCAGACTTTTATGCCTGAAAACTTTGAGGATGGTGTACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| 3UTR CAA 72 bp | TGTTGTGCATTGTCAACGTTGAAGCACATTGGGGGCTaGAACTTCAGAATATTCTTTCCAGGGCCATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: CCALSTLKHIGG*NFRIFFPGPSM Trigger: CATTGATGGCCCTGGAAAGAATATTCTGAAGTTCAAGCCCCCAATGTGCTTCAACGTTGACAATGCACAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| 3UTR CAA 72 bp | TCCAGCTTTGCTACCACATGTTGTGCATTGTCAACGTaGAAGCACATTGGGGGCTTGAACTTCAGAATATTC | + |
|
Preference number: 4 (lower is better) Translates to: SSFATTCCALST*KHIGGLNFRIF Trigger: GAATATTCTGAAGTTCAAGCCCCCAATGTGCTTCAACGTTGACAATGCACAACATGTGGTAGCAAAGCTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS-3UTR CCA 90 bp | TGGGAGTATGTCAGGTCTGTCTTTAAAACATGTTCTTTTGAAGCATGTACACCAAATACCACCACATCCTaGTGTCCCGTGTACTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WEYVRSVFKTCSFEACTPNTTTS*CPVYCR Trigger: TCGACAGTACACGGGACACCAGGATGTGGTGGTATT...TGGTGTACATGCTTCAAAAGAACATGTTTTAAAGACAGACCTGACATACTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101250.12 ENSMUST00000167797.8 |
||
| CDS-3UTR GCA 90 bp | TTTCATACTGTCAGTGGAAGCAAGGTAAGGTGTCAAAACTGTCACCTGCTTTTGTTCCAGGGCCATCAATaGTCAGTAAAATGTAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FHTVSGSKVRCQNCHLLLFQGHQ*SVKCSF Trigger: AAAACTACATTTTACTGAGCATTGATGGCCCTGGAA...CAAAAGCAGGTGACAGTTTTGACACCTTACCTTGCTTCCACTGACAGTATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAGTATGTCAGGTCTGTCTTTAAAACATGTTCTTTTGAAGCATGTACACCAAACGTTGAAGCACATTaGGGGCTTGAACTTCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: WEYVRSVFKTCSFEACTPNVEAH*GLELQN Trigger: ATTCTGAAGTTCAAGCCCCCAATGTGCTTCAACGTT...TGGTGTACATGCTTCAAAAGAACATGTTTTAAAGACAGACCTGACATACTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAGTATGTCAGGTCTGTCTTTAAAACATGTTCTTTTGAAGCATGTACACCAAATGTCATCCAGCTTTaGTACCACATGTTGTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: WEYVRSVFKTCSFEACTPNVIQL*YHMLCI Trigger: AATGCACAACATGTGGTAGCAAAGCTGGATGACATT...TGGTGTACATGCTTCAAAAGAACATGTTTTAAAGACAGACCTGACATACTCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CAA 90 bp | ATCTCATCTGCCACAAAGAGCCCTCCGGCTCTGTGGATGTGCCTGTGGAGGACATCCAGAGTGACGGCCTaGGCGCGCGTGTCCGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ISSATKSPPALWMCLWRTSRVTA*ARVSAA Trigger: GGCCGCGGACACGCGCGCCAAGGCCGTCACTCTGGA...TGTCCTCCACAGGCACATCCACAGAGCCGGAGGGCTCTTTGTGGCAGATGAGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS GCA 90 bp | CTGTGCACTGCTGATGACGTGCTTCACCTCGTTGGCATAGGCCTCTaGTGGGTTGGGGTGGTCCTCCCTGTAAGGGCCCCGGTAGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LCTADDVLHLVGIGL*WVGVVLPVRAPVGV Trigger: GACACCTACCGGGGCCCTTACAGGGAGGACCACCCCAACCCAGCAGAGGCCTATGCCAACGAGGTGAAGCACGTCATCAGCAGTGCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020625.7 ENSMUST00000101250.12 ENSMUST00000167797.8 |
||
| CDS CCA 90 bp | TGCACTGCTGATGACGTGCTTCACCTCGTTGGCATAGGCCTCTGCTaGGTTGGGGTGGTCCTCCCTGTAAGGGCCCCGGTAGGTGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CTADDVLHLVGIGLC*VGVVLPVRAPVGVW Trigger: CCAGACACCTACCGGGGCCCTTACAGGGAGGACCACCCCAACCCAGCAGAGGCCTATGCCAACGAGGTGAAGCACGTCATCAGCAGTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020625.7 ENSMUST00000101250.12 ENSMUST00000167797.8 |
||
| CDS TCA 90 bp | TGTTCATGTGCGGCTTGGACCACGGTAGGGTGGCAGTGCCCAACATaGGCCACGTTGTTGATACAGTCCAGGTACTCTCGCCCTTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSCAAWTTVGWQCPT*ATLLIQSRYSRPCS Trigger: TGAGCAAGGGCGAGAGTACCTGGACTGTATCAACAACGTGGCTCATGTTGGGCACTGCCACCCTACCGTGGTCCAAGCCGCACATGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020625.7 ENSMUST00000101250.12 ENSMUST00000167797.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGATCACCGTACTGCTGCCCTGGCTGCCCTATACAAAACCAGGCTGGTCTCCCATTGCCGATGGACTaGCCCATGGTGACAATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: ERSPYCCPGCPIQNQAGLPLPMD*PMVTMS Trigger: CGACATTGTCACCATGGGCAAGTCCATCGGCAATGG...GAGACCAGCCTGGTTTTGTATAGGGCAGCCAGGGCAGCAGTACGGTGATCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAGGAGGACTCTGGTCCTTCTCTAACACCCACAAGAGGCTCACAACCACCTCCAATGATAGGGTGCTaGGCTTTCTGCTGGGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQEDSGPSLTPTRGSQPPPMIGC*AFCWVR Trigger: CCTCACCCAGCAGAAAGCCAAGCACCCTATCATTGG...AGGTGGTTGTGAGCCTCTTGTGGGTGTTAGAGAAGGACCAGAGTCCTCCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAGGAGGACTCTGGTCCTTCTCTAACACCCACAAGAGGCTCACAACCACCTATTCCGCCTCTTCAGTaGCTGGTGTCCTCAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LQEDSGPSLTPTRGSQPPIPPLQ*LVSSGS Trigger: AGACCCTGAGGACACCAGCAACTGAAGAGGCGGAAT...AGGTGGTTGTGAGCCTCTTGTGGGTGTTAGAGAAGGACCAGAGTCCTCCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS TCA 90 bp | GGACCCATTCCTTCTGGCCACCCAGATTCCGGAACTTGTAGGGACTaGTGTCGATCAGGGAGCTCAGGTGACCATGATAAGCATGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: GPIPSGHPDSGTCRD*CRSGSSGDHDKHGL Trigger: TAGACCATGCTTATCATGGTCACCTGAGCTCCCTGATCGACATCAGTCCCTACAAGTTCCGGAATCTGGGTGGCCAGAAGGAATGGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020625.7 ENSMUST00000101250.12 ENSMUST00000167797.8 |
||
| CDS-3UTR CAA 90 bp | ATGTACACCATCCTCAAAGTTTTCAGGCATAAAAGTCTGACTGGGTCTTGTTTTTCCAGAGTGACGGCCTaGGCGCGCGTGTCCGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: MYTILKVFRHKSLTGSCFSRVTA*ARVSAA Trigger: GGCCGCGGACACGCGCGCCAAGGCCGTCACTCTGGA...AAAACAAGACCCAGTCAGACTTTTATGCCTGAAAACTTTGAGGATGGTGTACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000101250.12 ENSMUST00000167797.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTGGAGACCAAATATTCCGCCTCTTCAGTTGCTGGTGTCCTCAGGGTCTCAGTACAGGTACTGCCCTaGGCCTCGGATAATCTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLETKYSASSVAGVLRVSVQVLP*ASDNLN Trigger: GTTAAGATTATCCGAGGCCAAGGGCAGTACCTGTAC...TGAGACCCTGAGGACACCAGCAACTGAAGAGGCGGAATATTTGGTCTCCAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS-3UTR CAA 90 bp | CACCGTACTGCTGCCCTGGCTGCCCTATACAAAACCAGGCTGGTCTCAAACTTACTCAGGGTCTCATCTTaGATGAGATCCACACCGATG | + |
|
Preference number: 5 (lower is better) Translates to: HRTAALAALYKTRLVSNLLRVSS*MRSTPM Trigger: CATCGGTGTGGATCTCATCAAAGATGAGACCCTGAG...TAAGTTTGAGACCAGCCTGGTTTTGTATAGGGCAGCCAGGGCAGCAGTACGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CAA 90 bp | TGCATTGTCAACGTTGAAGCACATTGGGGGCTTGAACTTCAGAATATTCTTTCCCTCAAGGCCAGGTCGTaGGCTTCTGACCCAGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: CIVNVEAHWGLELQNILSLKARS*ASDPEF Trigger: GAATTCTGGGTCAGAAGCCAACGACCTGGCCTTGAG...GGAAAGAATATTCTGAAGTTCAAGCCCCCAATGTGCTTCAACGTTGACAATGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
||
| CDS-3UTR CAA 90 bp | CACCGTACTGCTGCCCTGGCTGCCCTATACAAAACCAGGCTGGTCTCAAACTTAAAGCACATTGGGGGCTaGAACTTCAGAATATTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HRTAALAALYKTRLVSNLKHIGG*NFRIFF Trigger: AAAGAATATTCTGAAGTTCAAGCCCCCAATGTGCTT...TAAGTTTGAGACCAGCCTGGTTTTGTATAGGGCAGCCAGGGCAGCAGTACGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CAA 90 bp | TTTCATACTGTCAGTGGAAGCAAGGTAAGGTGTCAAAACTGTCACCTGCTTTTGGTACAGGTACTGCCCTaGGCCTCGGATAATCTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: FHTVSGSKVRCQNCHLLLVQVLP*ASDNLN Trigger: GTTAAGATTATCCGAGGCCAAGGGCAGTACCTGTAC...CAAAAGCAGGTGACAGTTTTGACACCTTACCTTGCTTCCACTGACAGTATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS-3UTR CAA 90 bp | ATAGAGCTGTTGACTAGATGCTTCAGTGTTAGAGGTTATGAGACTTGCAGTGGTTGTGCATTGTCAACGTaGAAGCACATTGGGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IELLTRCFSVRGYETCSGCALST*KHIGGL Trigger: CAAGCCCCCAATGTGCTTCAACGTTGACAATGCACA...ACCACTGCAAGTCTCATAACCTCTAACACTGAAGCATCTAGTCAACAGCTCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167797.8 |
||
| CDS GCA 72 bp | GCTGATGACGTGCTTCACCTCGTTGGCATAGGCCTCTaGTGGGTTGGGGTGGTCCTCCCTGTAAGGGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: ADDVLHLVGIGL*WVGVVLPVRAP Trigger: CGGGGCCCTTACAGGGAGGACCACCCCAACCCAGCAGAGGCCTATGCCAACGAGGTGAAGCACGTCATCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020625.7 ENSMUST00000101250.12 ENSMUST00000167797.8 |
||
| CDS CCA 72 bp | CGTGCTTCACCTCGTTGGCATAGGCCTCTGCTGGGTTaGGGTGGTCCTCCCTGTAAGGGCCCCGGTAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RASPRWHRPLLG*GGPPCKGPGRC Trigger: ACACCTACCGGGGCCCTTACAGGGAGGACCACCCCAACCCAGCAGAGGCCTATGCCAACGAGGTGAAGCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020625.7 ENSMUST00000101250.12 ENSMUST00000167797.8 |
||
| CDS GCA 72 bp | CTTGCCTATGCGGCCAAAACCAACCTGGATCTCATCTaGCACAAAGAGCCCTCCGGCTCTGTGGATGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LAYAAKTNLDLI*HKEPSGSVDVL Trigger: GAGCACATCCACAGAGCCGGAGGGCTCTTTGTGGCAGATGAGATCCAGGTTGGTTTTGGCCGCATAGGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020625.7 ENSMUST00000167797.8 |
||
| CDS GCA 72 bp | GCCACGTTGTTGATACAGTCCAGGTACTCTCGCCCTTaGTCATCGTACAGGTACTGCCCTTGGCCTCGGATA | + |
|
Preference number: 6 (lower is better) Translates to: ATLLIQSRYSRP*SSYRYCPWPRI Trigger: TATCCGAGGCCAAGGGCAGTACCTGTACGATGAGCAAGGGCGAGAGTACCTGGACTGTATCAACAACGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020625.7 ENSMUST00000101250.12 ENSMUST00000167797.8 |
||
| CDS GCA 72 bp | AGCGAAGAAGGCTGCGATCTTCCTGCCCTTCTGCTGTaGACTGCTGATGACGTGCTTCACCTCGTTGGCATA | + |
|
Preference number: 6 (lower is better) Translates to: SEEGCDLPALLL*TADDVLHLVGI Trigger: TATGCCAACGAGGTGAAGCACGTCATCAGCAGTGCACAGCAGAAGGGCAGGAAGATCGCAGCCTTCTTCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020625.7 ENSMUST00000167797.8 |
||
| CDS CAA 72 bp | AGCCACGTTGTTGATACAGTCCAGGTACTCTCGCCCTaGCTCATCGTACAGGTACTGCCCTTGGCCTCGGAT | + |
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Preference number: 6 (lower is better) Translates to: SHVVDTVQVLSP*LIVQVLPLASD Trigger: ATCCGAGGCCAAGGGCAGTACCTGTACGATGAGCAAGGGCGAGAGTACCTGGACTGTATCAACAACGTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020625.7 ENSMUST00000101250.12 ENSMUST00000167797.8 |
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| CDS TCA 72 bp | CCACGATGTTGTCATGCAGGTAGCGGCTGTTGGTGTTaGGCACTAGGTTCTGTTCATGTGCGGCTTGGACCA | + |
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Preference number: 6 (lower is better) Translates to: PRCCHAGSGCWC*ALGSVHVRLGP Trigger: TGGTCCAAGCCGCACATGAACAGAACCTAGTGCTCAACACCAACAGCCGCTACCTGCATGACAACATCGTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020625.7 ENSMUST00000101250.12 ENSMUST00000167797.8 |
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| CDS TCA 72 bp | CCTTCTGGCCACCCAGATTCCGGAACTTGTAGGGACTaGTGTCGATCAGGGAGCTCAGGTGACCATGATAAG | + |
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Preference number: 6 (lower is better) Translates to: PSGHPDSGTCRD*CRSGSSGDHDK Trigger: CTTATCATGGTCACCTGAGCTCCCTGATCGACATCAGTCCCTACAAGTTCCGGAATCTGGGTGGCCAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020625.7 ENSMUST00000101250.12 ENSMUST00000167797.8 |
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| CDS GCA 72 bp | TCCAGGTACTCTCGCCCTTGCTCATCGTACAGGTACTaGCCTTGGCCTCGGATAATCTTAACAGGATCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SRYSRPCSSYRY*PWPRIILTGSS Trigger: TGAGGATCCTGTTAAGATTATCCGAGGCCAAGGGCAGTACCTGTACGATGAGCAAGGGCGAGAGTACCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020625.7 ENSMUST00000101250.12 ENSMUST00000167797.8 |
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| CDS CAA 90 bp | CCCAACATGAGCCACGTTGTTGATACAGTCCAGGTACTCTCGCCCTaGCTCATCGTACAGGTACTGCCCTTGGCCTCGGATAATCTTAAC | + |
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Preference number: 6 (lower is better) Translates to: PNMSHVVDTVQVLSP*LIVQVLPLASDNLN Trigger: GTTAAGATTATCCGAGGCCAAGGGCAGTACCTGTACGATGAGCAAGGGCGAGAGTACCTGGACTGTATCAACAACGTGGCTCATGTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020625.7 ENSMUST00000101250.12 ENSMUST00000167797.8 |
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| CDS CAA 72 bp | GTACTCTCGCCCTTGCTCATCGTACAGGTACTGCCCTaGGCCTCGGATAATCTTAACAGGATCCTCAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: VLSPLLIVQVLP*ASDNLNRILRK Trigger: TTTCCTGAGGATCCTGTTAAGATTATCCGAGGCCAAGGGCAGTACCTGTACGATGAGCAAGGGCGAGAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020625.7 ENSMUST00000101250.12 ENSMUST00000167797.8 |
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| CDS CCA 72 bp | TACTCTCGCCCTTGCTCATCGTACAGGTACTGCCCTTaGCCTCGGATAATCTTAACAGGATCCTCAGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: YSRPCSSYRYCP*PRIILTGSSGK Trigger: TTTTCCTGAGGATCCTGTTAAGATTATCCGAGGCCAAGGGCAGTACCTGTACGATGAGCAAGGGCGAGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020625.7 ENSMUST00000101250.12 ENSMUST00000167797.8 |
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| CDS CAA 90 bp | TGTCTCCCAAGTGCTGGATTAAAGGCATGCTCCACTATGGTCATCTaGGGAAATTGGTTCTTTAGAACTGTCTTCCTGCCCTTCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: CLPSAGLKACSTMVI*GNWFFRTVFLPFCC Trigger: ACAGCAGAAGGGCAGGAAGACAGTTCTAAAGAACCAATTTCCCAAGATGACCATAGTGGAGCATGCCTTTAATCCAGCACTTGGGAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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| CDS CAA 72 bp | AGTGCTGGATTAAAGGCATGCTCCACTATGGTCATCTaGGGAAATTGGTTCTTTAGAACTGTCTTCCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SAGLKACSTMVI*GNWFFRTVFLP Trigger: GGGCAGGAAGACAGTTCTAAAGAACCAATTTCCCAAGATGACCATAGTGGAGCATGCCTTTAATCCAGCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101250.12 |
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