Pregenerated sensors for PHYHIPL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037747Ensembl transcript IDs: ENSMUST00000046513.10, ENSMUST00000162144.2, ENSMUST00000162251.8
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGAGGAGACACGGAAAGGCTCTGAATGACAGAGTTTGCTTTTGGTaGCAGCGGCATATGCATGCTTCAGTGGGGACATCTGATGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: KRRHGKALNDRVCFW*QRHMHASVGTSDGR Trigger: TCTGCCATCAGATGTCCCCACTGAAGCATGCATATGCCGCTGTCACCAAAAGCAAACTCTGTCATTCAGAGCCTTTCCGTGTCTCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| 3UTR GCA 90 bp | CAAGGCGGAAGTGCTGACAAGTCTAGGCTTTTAGGATTTAACTCATaGTGCAATTACTCTCTCTCATGCGGTTTGGAGTTATCCCGATAT | + |
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Preference number: 1 (lower is better) Translates to: QGGSADKSRLLGFNS*CNYSLSCGLELSRY Trigger: ATATCGGGATAACTCCAAACCGCATGAGAGAGAGTAATTGCAGCATGAGTTAAATCCTAAAAGCCTAGACTTGTCAGCACTTCCGCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
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| 3UTR GCA 90 bp | TCTAGGCTTTTAGGATTTAACTCATGCTGCAATTACTCTCTCTCATaGGGTTTGGAGTTATCCCGATATTTATTCAGTAGATTAAAATGG | + |
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Preference number: 1 (lower is better) Translates to: SRLLGFNSCCNYSLS*GLELSRYLFSRLKW Trigger: CCATTTTAATCTACTGAATAAATATCGGGATAACTCCAAACCGCATGAGAGAGAGTAATTGCAGCATGAGTTAAATCCTAAAAGCCTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
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| 3UTR-3UTR TCA 90 bp | CAAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGGGCGGTTCAGTGGGGACATCTaGTGGCAGATGGACAACAGA | + |
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Preference number: 2 (lower is better) Translates to: QTVSGQPGDIVESGGQGRFSGDI*WQMDNR Trigger: TCTGTTGTCCATCTGCCATCAGATGTCCCCACTGAA...CCGCCCTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGGCAAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGATATGCATGCTTCAGTaGGGACATCTGATGGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: LGKQCQDNLGTSLKVVDKICMLQ*GHLMAD Trigger: ATCTGCCATCAGATGTCCCCACTGAAGCATGCATAT...CTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTTGCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAAACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGTTCAGTGGGGACATCTaGTGGCAGATGGACAACAGA | + |
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Preference number: 2 (lower is better) Translates to: RKHKSIAASRQTVSGQPGFSGDI*WQMDNR Trigger: TCTGTTGTCCATCTGCCATCAGATGTCCCCACTGAA...CCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGGGACACGGAAAGGCTCTaGATGACAGAGTTTGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: GNIKALQHLGKQCQDNLGDTERL*MTEFAF Trigger: AAAAGCAAACTCTGTCATTCAGAGCCTTTCCGTGTC...CCCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAAACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGGACACGGAAAGGCTCTaGATGACAGAGTTTGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: RKHKSIAASRQTVSGQPGDTERL*MTEFAF Trigger: AAAAGCAAACTCTGTCATTCAGAGCCTTTCCGTGTC...CCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCTGCAATTACTCTCTCTCATGCGGTTTGGAGTTATCCCGATATTTATTCAGGGTGACAGCGGCATATaGATGCTTCAGTGGGGACAT | + |
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Preference number: 2 (lower is better) Translates to: MLQLLSLMRFGVIPIFIQGDSGI*MLQWGH Trigger: ATGTCCCCACTGAAGCATGCATATGCCGCTGTCACC...CTGAATAAATATCGGGATAACTCCAAACCGCATGAGAGAGAGTAATTGCAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTCTCTGTATTCACCTGCTGTTTATGAATCAGAGTAATGGCCTTCATAAACTCTCTCATGCGGTTTaGAGTTATCCCGATATTTAT | + |
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Preference number: 2 (lower is better) Translates to: CSLCIHLLFMNQSNGLHKLSHAV*SYPDIY Trigger: ATAAATATCGGGATAACTCCAAACCGCATGAGAGAG...TTTATGAAGGCCATTACTCTGATTCATAAACAGCAGGTGAATACAGAGAGAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
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| 3UTR CAA 90 bp | CTTTTAGGATTTAACTCATGCTGCAATTACTCTCTCTCATGCGGTTaGGAGTTATCCCGATATTTATTCAGTAGATTAAAATGGATGCAC | + |
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Preference number: 2 (lower is better) Translates to: LLGFNSCCNYSLSCG*ELSRYLFSRLKWMH Trigger: GTGCATCCATTTTAATCTACTGAATAAATATCGGGATAACTCCAAACCGCATGAGAGAGAGTAATTGCAGCATGAGTTAAATCCTAAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
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| 3UTR TCA 72 bp | AAGGGCGGGCAAGAGGAGACACGGAAAGGCTCTGAATaGCAGAGTTTGCTTTTGGTGACAGCGGCATATGCA | + |
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Preference number: 3 (lower is better) Translates to: KGGQEETRKGSE*QSLLLVTAAYA Trigger: TGCATATGCCGCTGTCACCAAAAGCAAACTCTGTCATTCAGAGCCTTTCCGTGTCTCCTCTTGCCCGCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| 3UTR TCA 72 bp | CACGGAAAGGCTCTGAATGACAGAGTTTGCTTTTGGTaGCAGCGGCATATGCATGCTTCAGTGGGGACATCT | + |
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Preference number: 3 (lower is better) Translates to: HGKALNDRVCFW*QRHMHASVGTS Trigger: AGATGTCCCCACTGAAGCATGCATATGCCGCTGTCACCAAAAGCAAACTCTGTCATTCAGAGCCTTTCCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| 3UTR GCA 72 bp | AGTGCTGACAAGTCTAGGCTTTTAGGATTTAACTCATaGTGCAATTACTCTCTCTCATGCGGTTTGGAGTTA | + |
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Preference number: 3 (lower is better) Translates to: SADKSRLLGFNS*CNYSLSCGLEL Trigger: TAACTCCAAACCGCATGAGAGAGAGTAATTGCAGCATGAGTTAAATCCTAAAAGCCTAGACTTGTCAGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
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| CDS-3UTR TCA 90 bp | CAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGGGCGGGCAAGAGGAGTTTCCCACTGATGGGTaGGCCATGGCTACCACTGTT | + |
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Preference number: 4 (lower is better) Translates to: QDNLGTSLKVVDKGGQEEFPTDG*AMATTV Trigger: AACAGTGGTAGCCATGGCTCACCCATCAGTGGGAAA...CTCCTCTTGCCCGCCCTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR TCA 90 bp | CAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGGGCGGGCAAGAGGAGGTATCTTCCATATGGTaGATCCTGGGGTGGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: QDNLGTSLKVVDKGGQEEVSSIW*ILGWLP Trigger: GGGAAGCCACCCCAGGATTCACCATATGGAAGATAC...CTCCTCTTGCCCGCCCTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR TCA 90 bp | GGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGGGCGGGCAAGAGGAGACGTATCTTCCATATGGTaGATCCTGGGGTGGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: GQPGDIVESGGQGRARGDVSSIW*ILGWLP Trigger: GGGAAGCCACCCCAGGATTCACCATATGGAAGATAC...GTCTCCTCTTGCCCGCCCTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR TCA 90 bp | AAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGGGCGGGCTTCCAGTTTCCCACTaGTGGGTGAGCCATGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: KQCQDNLGTSLKVVDKGGLPVSH*WVSHGY Trigger: GTAGCCATGGCTCACCCATCAGTGGGAAACTGGAAG...CCCGCCCTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| 3UTR CAA 72 bp | CTAGGCAAACAGTGTCAGGACAACCTGGGGACATCGTaGAAAGTGGTGGACAAGGGCGGGCAAGAGGAGACA | + |
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Preference number: 4 (lower is better) Translates to: LGKQCQDNLGTS*KVVDKGGQEET Trigger: TGTCTCCTCTTGCCCGCCCTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTTGCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR TCA 90 bp | GGCAGATGGACAACAGAGGGTAATGCTCCTATGGGAAGACAGGGTGTGTGGGGCACTCAGTGCTGCAGCTaGAGAAGATGCCTTCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: GRWTTEGNAPMGRQGVWGTQCCS*RRCLPV Trigger: AACTGGAAGGCATCTTCTTCAGCTGCAGCACTGAGT...GCCCCACACACCCTGTCTTCCCATAGGAGCATTACCCTCTGTTGTCCATCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR CCA 90 bp | CATCTAGGCAAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACATGACATCCTGGGCGTaGTGGTACACCAGCACCCCA | + |
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Preference number: 4 (lower is better) Translates to: HLGKQCQDNLGTSLKVVDMTSWA*WYTSTP Trigger: TGGGGTGCTGGTGTACCACCACGCCCAGGATGTCAT...GTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTTGCCTAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR TCA 90 bp | CAAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGGGCGGAAATTCATCTCCTGGTaGTCCCACAGGGGCAATGAC | + |
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Preference number: 4 (lower is better) Translates to: QTVSGQPGDIVESGGQGRKFISW*SHRGND Trigger: GTCATTGCCCCTGTGGGATCACCAGGAGATGAATTT...CCGCCCTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR TCA 90 bp | GGAAACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGGCTTCCAGTTTCCCACTaGTGGGTGAGCCATGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: GNIKALQHLGKQCQDNLGLPVSH*WVSHGY Trigger: GTAGCCATGGCTCACCCATCAGTGGGAAACTGGAAG...CCCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR TCA 90 bp | AAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGGGCGGGTCCTTGGAATTTAGTTaGGGAAGGCGCTGCTTACAA | + |
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Preference number: 4 (lower is better) Translates to: KQCQDNLGTSLKVVDKGGSLEFS*GRRCLQ Trigger: TTGTAAGCAGCGCCTTCCTCAACTAAATTCCAAGGA...CCCGCCCTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR GCA 90 bp | CATCTAGGCAAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACCTTAAGCATGCGTCCTaGAATCACGTCAGCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: HLGKQCQDNLGTSLKVVDLKHAS*NHVSLL Trigger: GAGAAGGCTGACGTGATTGCAGGACGCATGCTTAAG...GTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTTGCCTAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR GCA 90 bp | GCAGATGGACAACAGAGGGTAATGCTCCTATGGGAAGACAGGGTGTGTGGGGCGGCTGGGGTCTTTCTTTaGATTTGCAGTAGACAAACT | + |
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Preference number: 4 (lower is better) Translates to: ADGQQRVMLLWEDRVCGAAGVFL*ICSRQT Trigger: AGTTTGTCTACTGCAAATGCAAAGAAAGACCCCAGC...CGCCCCACACACCCTGTCTTCCCATAGGAGCATTACCCTCTGTTGTCCATCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR CCA 90 bp | CATCTAGGCAAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACTCTAAAATGACATCCTaGGCGTGGTGGTACACCAGC | + |
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Preference number: 4 (lower is better) Translates to: HLGKQCQDNLGTSLKVVDSKMTS*AWWYTS Trigger: GCTGGTGTACCACCACGCCCAGGATGTCATTTTAGA...GTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTTGCCTAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR CCA 90 bp | CAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGGGCGGGCAAGAGGAGGGCCACCAATTTTGTTaGAACATCCTTGTGTTTAAA | + |
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Preference number: 4 (lower is better) Translates to: QDNLGTSLKVVDKGGQEEGHQFC*NILVFK Trigger: TTTAAACACAAGGATGTTCCAACAAAATTGGTGGCC...CTCCTCTTGCCCGCCCTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR CCA 90 bp | CAAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGGGCGGGCAAAGGAACAGCTTTaGCCACCAATTTTGTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: QTVSGQPGDIVESGGQGRAKEQL*PPILLE Trigger: TTCCAACAAAATTGGTGGCCAAAGCTGTTCCTTTGC...CCGCCCTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR GCA 90 bp | AAACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGGACATGACCAGTGATTTCTaGCACGGTGCCCAGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: KHKSIAASRQTVSGQPGDMTSDF*HGAQGK Trigger: CTTTCCCTGGGCACCGTGGCAGAAATCACTGGTCAT...GTCCCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR CCA 90 bp | AAATACATTGGTGAGACAAAGAAAATTTCTGCTCTTCACCCAGGGAGGAAAACATCACGGTCGCACAGCTaGATGGCCTCCAGGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: KYIGETKKISALHPGRKTSRSHS*MASRLR Trigger: CCTCAGCCTGGAGGCCATCCAGCTGTGCGACCGTGA...TGTTTTCCTCCCTGGGTGAAGAGCAGAAATTTTCTTTGTCTCACCAATGTATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
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| CDS-3UTR CCA 90 bp | GGCAGATGGACAACAGAGGGTAATGCTCCTATGGGAAGACAGGGTGTGTGGGGCGTGTTAGATGAACTTTaGAGTAATCTGCTGTACAGA | + |
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Preference number: 4 (lower is better) Translates to: GRWTTEGNAPMGRQGVWGVLDEL*SNLLYR Trigger: TCTGTACAGCAGATTACTCCAAAGTTCATCTAACAC...GCCCCACACACCCTGTCTTCCCATAGGAGCATTACCCTCTGTTGTCCATCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR TCA 90 bp | CATCTAGGCAAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACATCCCACAGGGGCAATaGCAAGAATCACATAATGAT | + |
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Preference number: 4 (lower is better) Translates to: HLGKQCQDNLGTSLKVVDIPQGQ*QESHND Trigger: ATCATTATGTGATTCTTGTCATTGCCCCTGTGGGAT...GTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTTGCCTAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR GCA 90 bp | AGGAAACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGCTTAAGCATGCGTCCTaGAATCACGTCAGCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: RKHKSIAASRQTVSGQPGLKHAS*NHVSLL Trigger: GAGAAGGCTGACGTGATTGCAGGACGCATGCTTAAG...CCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR CCA 90 bp | AGGAAACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGCTGATGGGTGAGCCATaGCTACCACTGTTATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: RKHKSIAASRQTVSGQPGLMGEP*LPLLSL Trigger: CAAGGATAACAGTGGTAGCCATGGCTCACCCATCAG...CCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR CCA 90 bp | AAACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGGACTCTAAAATGACATCCTaGGCGTGGTGGTACACCAGC | + |
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Preference number: 4 (lower is better) Translates to: KHKSIAASRQTVSGQPGDSKMTS*AWWYTS Trigger: GCTGGTGTACCACCACGCCCAGGATGTCATTTTAGA...GTCCCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR CCA 90 bp | CTAGGCAAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGTACAGGTTTTGCAGCTaGGGTCTTTCTTTGCATTTG | + |
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Preference number: 4 (lower is better) Translates to: LGKQCQDNLGTSLKVVDKYRFCS*GLSLHL Trigger: CAAATGCAAAGAAAGACCCCAGCTGCAAAACCTGTA...CTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTTGCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR GCA 90 bp | AAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGGGCGGGGTTGAAAAGTTTTTCTaGTGCAATCTCAAACCTGTA | + |
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Preference number: 4 (lower is better) Translates to: KQCQDNLGTSLKVVDKGGVEKFF*CNLKPV Trigger: TACAGGTTTGAGATTGCAGCAGAAAAACTTTTCAAC...CCCGCCCTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR CCA 90 bp | CAAGGCGGAAGTGCTGACAAGTCTAGGCTTTTAGGATTTAACTCATGCTGCAATCTGATGGGTGAGCCATaGCTACCACTGTTATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QGGSADKSRLLGFNSCCNLMGEP*LPLLSL Trigger: CAAGGATAACAGTGGTAGCCATGGCTCACCCATCAG...ATTGCAGCATGAGTTAAATCCTAAAAGCCTAGACTTGTCAGCACTTCCGCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
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| CDS-3UTR CCA 90 bp | TGTTGTTCTCTCTGTATTCACCTGCTGTTTATGAATCAGAGTAATGGCCTTCATATGACATCCTGGGCGTaGTGGTACACCAGCACCCCA | + |
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Preference number: 4 (lower is better) Translates to: CCSLCIHLLFMNQSNGLHMTSWA*WYTSTP Trigger: TGGGGTGCTGGTGTACCACCACGCCCAGGATGTCAT...ATGAAGGCCATTACTCTGATTCATAAACAGCAGGTGAATACAGAGAGAACAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
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| CDS-3UTR TCA 90 bp | AACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGGACATATGCCACTGTCTTGTaGTTTGTTACCATCACGGTC | + |
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Preference number: 4 (lower is better) Translates to: NIKALQHLGKQCQDNLGTYATVL*FVTITV Trigger: GACCGTGATGGTAACAAATCACAAGACAGTGGCATA...TGTCCCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
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| CDS-3UTR TCA 90 bp | TGTTGTTCTCTCTGTATTCACCTGCTGTTTATGAATCAGAGTAATGGCCTTCATTTTCCCACTGATGGGTaGGCCATGGCTACCACTGTT | + |
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Preference number: 4 (lower is better) Translates to: CCSLCIHLLFMNQSNGLHFPTDG*AMATTV Trigger: AACAGTGGTAGCCATGGCTCACCCATCAGTGGGAAA...ATGAAGGCCATTACTCTGATTCATAAACAGCAGGTGAATACAGAGAGAACAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
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| CDS-3UTR TCA 90 bp | AAACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGGACATCCCACAGGGGCAATaGCAAGAATCACATAATGAT | + |
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Preference number: 4 (lower is better) Translates to: KHKSIAASRQTVSGQPGDIPQGQ*QESHND Trigger: ATCATTATGTGATTCTTGTCATTGCCCCTGTGGGAT...GTCCCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS-3UTR TCA 90 bp | ATGCTGCAATTACTCTCTCTCATGCGGTTTGGAGTTATCCCGATATTTATTCAGAAATTCATCTCCTGGTaGTCCCACAGGGGCAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: MLQLLSLMRFGVIPIFIQKFISW*SHRGND Trigger: GTCATTGCCCCTGTGGGATCACCAGGAGATGAATTT...CTGAATAAATATCGGGATAACTCCAAACCGCATGAGAGAGAGTAATTGCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
||
| CDS-3UTR GCA 90 bp | CTAGGCAAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGGTTGAAAAGTTTTTCTaGTGCAATCTCAAACCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LGKQCQDNLGTSLKVVDKVEKFF*CNLKPV Trigger: TACAGGTTTGAGATTGCAGCAGAAAAACTTTTCAAC...CTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTTGCCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGGCAAAGGAACAGCTTTaGCCACCAATTTTGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RKHKSIAASRQTVSGQPGAKEQL*PPILLE Trigger: TTCCAACAAAATTGGTGGCCAAAGCTGTTCCTTTGC...CCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| 3UTR CAA 72 bp | ACCCAGATTCTAGACACAGACTATGTCAGAGGCGTGTaGTTCTCTCTGTATTCACCTGCTGTTTATGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: TQILDTDYVRGV*FSLYSPAVYES Trigger: TGATTCATAAACAGCAGGTGAATACAGAGAGAACAACACGCCTCTGACATAGTCTGTGTCTAGAATCTGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
||
| CDS-3UTR CCA 90 bp | AAACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGGACGGCCACCAATTTTGTTaGAACATCCTTGTGTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KHKSIAASRQTVSGQPGDGHQFC*NILVFK Trigger: TTTAAACACAAGGATGTTCCAACAAAATTGGTGGCC...GTCCCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCTCTGTATTCACCTGCTGTTTATGAATCAGAGTAATGGCCTTCATAAATCCTTGGAATTTAGTTaGGGAAGGCGCTGCTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: CSLCIHLLFMNQSNGLHKSLEFS*GRRCLQ Trigger: TTGTAAGCAGCGCCTTCCTCAACTAAATTCCAAGGA...TTTATGAAGGCCATTACTCTGATTCATAAACAGCAGGTGAATACAGAGAGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
||
| CDS-3UTR CCA 90 bp | TGTTCTCTCTGTATTCACCTGCTGTTTATGAATCAGAGTAATGGCCTTCATAAATACAGGTTTTGCAGCTaGGGTCTTTCTTTGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: CSLCIHLLFMNQSNGLHKYRFCS*GLSLHL Trigger: CAAATGCAAAGAAAGACCCCAGCTGCAAAACCTGTA...TTTATGAAGGCCATTACTCTGATTCATAAACAGCAGGTGAATACAGAGAGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
||
| CDS-3UTR CCA 90 bp | TGTTCTCTCTGTATTCACCTGCTGTTTATGAATCAGAGTAATGGCCTTCATAAAGTGTTAGATGAACTTTaGAGTAATCTGCTGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSLCIHLLFMNQSNGLHKVLDEL*SNLLYR Trigger: TCTGTACAGCAGATTACTCCAAAGTTCATCTAACAC...TTTATGAAGGCCATTACTCTGATTCATAAACAGCAGGTGAATACAGAGAGAACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
||
| CDS-3UTR CAA 90 bp | CAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGGGCGGGCAAGAGGAGGGTGGCTTCCCTGTATaGAACTCAGTGCTGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QDNLGTSLKVVDKGGQEEGGFPV*NSVLQL Trigger: CAGCTGCAGCACTGAGTTCAATACAGGGAAGCCACC...CTCCTCTTGCCCGCCCTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | GGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGGGCGGGCAAGAGGAGACCACCATCAACCTGTTTaGAGGCAGTCTGTACCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: GQPGDIVESGGQGRARGDHHQPV*RQSVPL Trigger: TAGCGGTACAGACTGCCTCAAAACAGGTTGATGGTG...GTCTCCTCTTGCCCGCCCTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGGGCGGTCCAGGCTGAGGTTCTaGATCTCCTCACACGGACTA | + |
|
Preference number: 5 (lower is better) Translates to: QTVSGQPGDIVESGGQGRSRLRF*ISSHGL Trigger: TAGTCCGTGTGAGGAGATCAAGAACCTCAGCCTGGA...CCGCCCTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
||
| CDS-3UTR CAA 90 bp | AAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGGGCGGGCCACTGTCTTGTGATTaGTTACCATCACGGTCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KQCQDNLGTSLKVVDKGGPLSCD*LPSRSH Trigger: GTGCGACCGTGATGGTAACAAATCACAAGACAGTGG...CCCGCCCTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
||
| CDS-3UTR CAA 90 bp | GGCAGATGGACAACAGAGGGTAATGCTCCTATGGGAAGACAGGGTGTGTGGGGCGGCAAAGGAACAGCTTaGGCCACCAATTTTGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GRWTTEGNAPMGRQGVWGGKGTA*ATNFVG Trigger: TCCAACAAAATTGGTGGCCAAAGCTGTTCCTTTGCC...GCCCCACACACCCTGTCTTCCCATAGGAGCATTACCCTCTGTTGTCCATCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | CAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGGGCGGGCAAGAGGAGCTTTGGCCACCAATTTaGTTGGAACATCCTTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QDNLGTSLKVVDKGGQEELWPPI*LEHPCV Trigger: AACACAAGGATGTTCCAACAAAATTGGTGGCCAAAG...CTCCTCTTGCCCGCCCTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGATGGACAACAGAGGGTAATGCTCCTATGGGAAGACAGGGTGTGTGGGGCCTGATGTTACAGGTTTaGCAGCTGGGGTCTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GRWTTEGNAPMGRQGVWGLMLQV*QLGSFF Trigger: AAAGAAAGACCCCAGCTGCAAAACCTGTAACATCAG...GCCCCACACACCCTGTCTTCCCATAGGAGCATTACCCTCTGTTGTCCATCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGATGGACAACAGAGGGTAATGCTCCTATGGGAAGACAGGGTGTGTGGGGCCTTTGGCCACCAATTTaGTTGGAACATCCTTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GRWTTEGNAPMGRQGVWGLWPPI*LEHPCV Trigger: AACACAAGGATGTTCCAACAAAATTGGTGGCCAAAG...GCCCCACACACCCTGTCTTCCCATAGGAGCATTACCCTCTGTTGTCCATCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | CATCTAGGCAAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACCACCATCAACCTGTTTaGAGGCAGTCTGTACCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: HLGKQCQDNLGTSLKVVDHHQPV*RQSVPL Trigger: TAGCGGTACAGACTGCCTCAAAACAGGTTGATGGTG...GTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTTGCCTAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | CTAGGCAAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACAAGCTACCACTGTTATCCTaGATGGAAGGCTGCATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGKQCQDNLGTSLKVVDKLPLLS*MEGCIA Trigger: TGCTATGCAGCCTTCCATCAAGGATAACAGTGGTAG...CTTGTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTTGCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | CATCTAGGCAAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACCTACCACTGTTATCCTaGATGGAAGGCTGCATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HLGKQCQDNLGTSLKVVDLPLLS*MEGCIA Trigger: TGCTATGCAGCCTTCCATCAAGGATAACAGTGGTAG...GTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTTGCCTAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | AAACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGGACGGTGGCTTCCCTGTATaGAACTCAGTGCTGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KHKSIAASRQTVSGQPGDGGFPV*NSVLQL Trigger: CAGCTGCAGCACTGAGTTCAATACAGGGAAGCCACC...GTCCCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGATGGACAACAGAGGGTAATGCTCCTATGGGAAGACAGGGTGTGTGGGGCTCCTTGTGTTTAAACTaGTTCGAGTTCTTGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRWTTEGNAPMGRQGVWGSLCLN*FEFLFS Trigger: AGAGAACAAGAACTCGAACAAGTTTAAACACAAGGA...GCCCCACACACCCTGTCTTCCCATAGGAGCATTACCCTCTGTTGTCCATCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | GCAGATGGACAACAGAGGGTAATGCTCCTATGGGAAGACAGGGTGTGTGGGGCGTTTGTTGGAACATCCTaGTGTTTAAACTTGTTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: ADGQQRVMLLWEDRVCGAFVGTS*CLNLFE Trigger: CTCGAACAAGTTTAAACACAAGGATGTTCCAACAAA...CGCCCCACACACCCTGTCTTCCCATAGGAGCATTACCCTCTGTTGTCCATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | CATCTAGGCAAACAGTGTCAGGACAACCTGGGGACATCGTTGAAAGTGGTGGACATATCCCATGAGATCTaGAAGGAGTCACATGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: HLGKQCQDNLGTSLKVVDISHEI*KESHVM Trigger: CATCACATGTGACTCCTTCAAGATCTCATGGGATAT...GTCCACCACTTTCAACGATGTCCCCAGGTTGTCCTGACACTGTTTGCCTAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS TCA 90 bp | AATCTCACTCCATTCAGACACGACGTAATCACCATCAACCTGTTTTaGGGCAGTCTGTACCGCTACTGTATACTCAGTCCTTGGGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: NLTPFRHDVITINLF*GSLYRYCILSPWAQ Trigger: TTGAGCCCAAGGACTGAGTATACAGTAGCGGTACAGACTGCCTCAAAACAGGTTGATGGTGATTACGTCGTGTCTGAATGGAGTGAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046513.10 ENSMUST00000162144.2 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | AACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGGACACTGTATACTCAGTCCTaGGGCTCAAAAACCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NIKALQHLGKQCQDNLGTLYTQS*GSKTSV Trigger: GACACTGGTTTTTGAGCCCAAGGACTGAGTATACAG...TGTCCCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS CCA 90 bp | ATACTCAGTCCTTGGGCTCAAAAACCAGTGTCCACGAACAGTCATTaGCAAAGGAACAGCTTTGGCCACCAATTTTGTTGGAACATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ILSPWAQKPVSTNSH*QRNSFGHQFCWNIL Trigger: AAGGATGTTCCAACAAAATTGGTGGCCAAAGCTGTTCCTTTGCCAATGACTGTTCGTGGACACTGGTTTTTGAGCCCAAGGACTGAGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046513.10 ENSMUST00000162144.2 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGCTGATGTTACAGGTTTaGCAGCTGGGGTCTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RKHKSIAASRQTVSGQPGLMLQV*QLGSFF Trigger: AAAGAAAGACCCCAGCTGCAAAACCTGTAACATCAG...CCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | AACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGGACAATATCCCATGAGATCTaGAAGGAGTCACATGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: NIKALQHLGKQCQDNLGTISHEI*KESHVM Trigger: CATCACATGTGACTCCTTCAAGATCTCATGGGATAT...TGTCCCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGAACTTGTTCGAGTTCTaGTTCTCTTTCTTGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKHKSIAASRQTVSGQPGNLFEF*FSFLLR Trigger: CCTCAACAAGAAAGAGAACAAGAACTCGAACAAGTT...CCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS TCA 90 bp | GAAGTAGTGCGTGATGCGGTCCTTCGACTTGGAGTCCATATCCCATaGGATCTTGAAGGAGTCACATGTGATGTTATTTATTTTGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: EVVRDAVLRLGVHIP*DLEGVTCDVIYFDV Trigger: AACATCAAAATAAATAACATCACATGTGACTCCTTCAAGATCTCATGGGATATGGACTCCAAGTCGAAGGACCGCATCACGCACTACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046513.10 ENSMUST00000162144.2 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAACATAAAAGCATTGCAGCATCTAGGCAAACAGTGTCAGGACAACCTGGGTTTGTTGGAACATCCTaGTGTTTAAACTTGTTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: RKHKSIAASRQTVSGQPGFVGTS*CLNLFE Trigger: CTCGAACAAGTTTAAACACAAGGATGTTCCAACAAA...CCCAGGTTGTCCTGACACTGTTTGCCTAGATGCTGCAATGCTTTTATGTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS-3UTR CAA 90 bp | AAATACATTGGTGAGACAAAGAAAATTTCTGCTCTTCACCCAGGGAGGAAAACACTGTATACTCAGTCCTaGGGCTCAAAAACCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KYIGETKKISALHPGRKTLYTQS*GSKTSV Trigger: GACACTGGTTTTTGAGCCCAAGGACTGAGTATACAG...TGTTTTCCTCCCTGGGTGAAGAGCAGAAATTTTCTTTGTCTCACCAATGTATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
||
| CDS-3UTR CAA 90 bp | TGTTCTCTCTGTATTCACCTGCTGTTTATGAATCAGAGTAATGGCCTTCATAAAGGCAAAGGAACAGCTTaGGCCACCAATTTTGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CSLCIHLLFMNQSNGLHKGKGTA*ATNFVG Trigger: TCCAACAAAATTGGTGGCCAAAGCTGTTCCTTTGCC...TTTATGAAGGCCATTACTCTGATTCATAAACAGCAGGTGAATACAGAGAGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
||
| CDS-3UTR CAA 90 bp | AAATACATTGGTGAGACAAAGAAAATTTCTGCTCTTCACCCAGGGAGGAAAACATCCTTGTGTTTAAACTaGTTCGAGTTCTTGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KYIGETKKISALHPGRKTSLCLN*FEFLFS Trigger: AGAGAACAAGAACTCGAACAAGTTTAAACACAAGGA...TGTTTTCCTCCCTGGGTGAAGAGCAGAAATTTTCTTTGTCTCACCAATGTATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
||
| CDS CAA 72 bp | CGGTCGCACAGCTGGATGGCCTCCAGGCTGAGGTTCTaGATCTCCTCACACGGACTACTGGGGCTGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSHSWMASRLRF*ISSHGLLGLLR Trigger: CCTCAGCAGCCCCAGTAGTCCGTGTGAGGAGATCAAGAACCTCAGCCTGGAGGCCATCCAGCTGTGCGACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
||
| CDS CAA 90 bp | TTACCATCACGGTCGCACAGCTGGATGGCCTCCAGGCTGAGGTTCTaGATCTCCTCACACGGACTACTGGGGCTGCTGAGGGCATGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LPSRSHSWMASRLRF*ISSHGLLGLLRAWS Trigger: GGACCATGCCCTCAGCAGCCCCAGTAGTCCGTGTGAGGAGATCAAGAACCTCAGCCTGGAGGCCATCCAGCTGTGCGACCGTGATGGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
||
| CDS CCA 72 bp | CTGTCTTGTGATTTGTTACCATCACGGTCGCACAGCTaGATGGCCTCCAGGCTGAGGTTCTTGATCTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LSCDLLPSRSHS*MASRLRFLISS Trigger: TGAGGAGATCAAGAACCTCAGCCTGGAGGCCATCCAGCTGTGCGACCGTGATGGTAACAAATCACAAGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046513.10 |
||
| CDS CCA 72 bp | AAGATGCCTTCCAGTTTCCCACTGATGGGTGAGCCATaGCTACCACTGTTATCCTTGATGGAAGGCTGCATA | + |
|
Preference number: 6 (lower is better) Translates to: KMPSSFPLMGEP*LPLLSLMEGCI Trigger: TATGCAGCCTTCCATCAAGGATAACAGTGGTAGCCATGGCTCACCCATCAGTGGGAAACTGGAAGGCATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS CCA 72 bp | CCTTGGGCTCAAAAACCAGTGTCCACGAACAGTCATTaGCAAAGGAACAGCTTTGGCCACCAATTTTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PWAQKPVSTNSH*QRNSFGHQFCW Trigger: CCAACAAAATTGGTGGCCAAAGCTGTTCCTTTGCCAATGACTGTTCGTGGACACTGGTTTTTGAGCCCAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046513.10 ENSMUST00000162144.2 ENSMUST00000162251.8 |
||
| CDS CCA 72 bp | GCAATCTCAAACCTGTATCTTCCATATGGTGAATCCTaGGGTGGCTTCCCTGTATTGAACTCAGTGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AISNLYLPYGES*GGFPVLNSVLQ Trigger: CTGCAGCACTGAGTTCAATACAGGGAAGCCACCCCAGGATTCACCATATGGAAGATACAGGTTTGAGATTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
||
| CDS CAA 72 bp | TTGAGGCAGTCTGTACCGCTACTGTATACTCAGTCCTaGGGCTCAAAAACCAGTGTCCACGAACAGTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: LRQSVPLLYTQS*GSKTSVHEQSL Trigger: CAATGACTGTTCGTGGACACTGGTTTTTGAGCCCAAGGACTGAGTATACAGTAGCGGTACAGACTGCCTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046513.10 ENSMUST00000162144.2 ENSMUST00000162251.8 |
||
| CDS CAA 90 bp | CAACCTGTTTTGAGGCAGTCTGTACCGCTACTGTATACTCAGTCCTaGGGCTCAAAAACCAGTGTCCACGAACAGTCATTGGCAAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QPVLRQSVPLLYTQS*GSKTSVHEQSLAKE Trigger: TTCCTTTGCCAATGACTGTTCGTGGACACTGGTTTTTGAGCCCAAGGACTGAGTATACAGTAGCGGTACAGACTGCCTCAAAACAGGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046513.10 ENSMUST00000162144.2 ENSMUST00000162251.8 |
||
| CDS TCA 72 bp | CCATTCAGACACGACGTAATCACCATCAACCTGTTTTaGGGCAGTCTGTACCGCTACTGTATACTCAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PFRHDVITINLF*GSLYRYCILSP Trigger: AGGACTGAGTATACAGTAGCGGTACAGACTGCCTCAAAACAGGTTGATGGTGATTACGTCGTGTCTGAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046513.10 ENSMUST00000162144.2 ENSMUST00000162251.8 |
||
| CDS CAA 72 bp | TCCATTCAGACACGACGTAATCACCATCAACCTGTTTaGAGGCAGTCTGTACCGCTACTGTATACTCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SIQTRRNHHQPV*RQSVPLLYTQS Trigger: GGACTGAGTATACAGTAGCGGTACAGACTGCCTCAAAACAGGTTGATGGTGATTACGTCGTGTCTGAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046513.10 ENSMUST00000162144.2 ENSMUST00000162251.8 |
||
| CDS CAA 90 bp | TATACTCAGTCCTTGGGCTCAAAAACCAGTGTCCACGAACAGTCATaGGCAAAGGAACAGCTTTGGCCACCAATTTTGTTGGAACATCCT | + |
|
Preference number: 6 (lower is better) Translates to: YTQSLGSKTSVHEQS*AKEQLWPPILLEHP Trigger: AGGATGTTCCAACAAAATTGGTGGCCAAAGCTGTTCCTTTGCCAATGACTGTTCGTGGACACTGGTTTTTGAGCCCAAGGACTGAGTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046513.10 ENSMUST00000162144.2 ENSMUST00000162251.8 |
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| CDS TCA 72 bp | TTCTGCTGCAATCTCAAACCTGTATCTTCCATATGGTaGATCCTGGGGTGGCTTCCCTGTATTGAACTCAGT | + |
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Preference number: 6 (lower is better) Translates to: FCCNLKPVSSIW*ILGWLPCIELS Trigger: ACTGAGTTCAATACAGGGAAGCCACCCCAGGATTCACCATATGGAAGATACAGGTTTGAGATTGCAGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046513.10 ENSMUST00000162251.8 |
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| CDS CAA 72 bp | CAGTGTCCACGAACAGTCATTGGCAAAGGAACAGCTTaGGCCACCAATTTTGTTGGAACATCCTTGTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: QCPRTVIGKGTA*ATNFVGTSLCL Trigger: TAAACACAAGGATGTTCCAACAAAATTGGTGGCCAAAGCTGTTCCTTTGCCAATGACTGTTCGTGGACACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046513.10 ENSMUST00000162144.2 ENSMUST00000162251.8 |
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| CDS CAA 90 bp | CTCAAAAACCAGTGTCCACGAACAGTCATTGGCAAAGGAACAGCTTaGGCCACCAATTTTGTTGGAACATCCTTGTGTTTAAACTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: LKNQCPRTVIGKGTA*ATNFVGTSLCLNLF Trigger: GAACAAGTTTAAACACAAGGATGTTCCAACAAAATTGGTGGCCAAAGCTGTTCCTTTGCCAATGACTGTTCGTGGACACTGGTTTTTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046513.10 ENSMUST00000162144.2 ENSMUST00000162251.8 |
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