Pregenerated sensors for PHYHIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003469Ensembl transcript IDs: ENSMUST00000003561.10, ENSMUST00000159180.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTGACAGGAGGGATGGACGGTTCTCCCATGCGGGAATTGGGCTCTaGGGGGATCAGGGGCAGCCAGGGCAAGACAGCAGTGCAGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: SDRRDGRFSHAGIGL*GDQGQPGQDSSAGG Trigger: ACCTCCTGCACTGCTGTCTTGCCCTGGCTGCCCCTGATCCCCCCAGAGCCCAATTCCCGCATGGGAGAACCGTCCATCCCTCCTGTCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR TCA 90 bp | ACTTTTCCAGAGAGTGGGAGGGCATCTCAAGTGGGTCAACGACAGTaGCAGGAGGGATGGACGGTTCTCCCATGCGGGAATTGGGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: TFPESGRASQVGQRQ*QEGWTVLPCGNWAL Trigger: CAGAGCCCAATTCCCGCATGGGAGAACCGTCCATCCCTCCTGTCACTGTCGTTGACCCACTTGAGATGCCCTCCCACTCTCTGGAAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR TCA 90 bp | CTACCTGCTTGTCTTGTCTCAGGGAGTCCACCCTCCCCGCCCTCCTaGTCCAGACAACAGCAAGAACAAGATGAAAACACAGGGAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: LPACLVSGSPPSPPS*SRQQQEQDENTGSW Trigger: CCAGCTCCCTGTGTTTTCATCTTGTTCTTGCTGTTGTCTGGATCAGGAGGGCGGGGAGGGTGGACTCCCTGAGACAAGACAAGCAGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR CCA 90 bp | AAACGAGAGAGGGTACTTTTCCAGAGAGTGGGAGGGCATCTCAAGTaGGTCAACGACAGTGACAGGAGGGATGGACGGTTCTCCCATGCG | + |
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Preference number: 1 (lower is better) Translates to: KRERVLFQRVGGHLK*VNDSDRRDGRFSHA Trigger: CGCATGGGAGAACCGTCCATCCCTCCTGTCACTGTCGTTGACCCACTTGAGATGCCCTCCCACTCTCTGGAAAAGTACCCTCTCTCGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR CCA 90 bp | ATTAGCCCAGAGAGCAAGGGATGGTGTGATAGAGAGCCAAAGATCTaGCTCACATGGCACAGAACAGTCATGACTCTCAGGCAGAGCGGG | + |
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Preference number: 1 (lower is better) Translates to: ISPESKGWCDREPKI*LTWHRTVMTLRQSG Trigger: CCCGCTCTGCCTGAGAGTCATGACTGTTCTGTGCCATGTGAGCCAGATCTTTGGCTCTCTATCACACCATCCCTTGCTCTCTGGGCTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR GCA 90 bp | GCCCTGTGGGTCTGCCAGCTCCTCTGTCCTTCACAGAAGTCCAGCTaGCTGTGTATCATCTCTGTCACCTCGGAAAATGTTACTATGACA | + |
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Preference number: 1 (lower is better) Translates to: ALWVCQLLCPSQKSS*LCIISVTSENVTMT Trigger: TGTCATAGTAACATTTTCCGAGGTGACAGAGATGATACACAGGCAGCTGGACTTCTGTGAAGGACAGAGGAGCTGGCAGACCCACAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR-3UTR TCA 90 bp | ACCCGCTTCAGGCTGAGGAACAGGTCTCAGGGGTCTCCTTCCCCCTCCTCGACCTCAGGCCCAGCTGAGTaGGAAGGGGGCTGTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: TRFRLRNRSQGSPSPSSTSGPAE*EGGCLG Trigger: CCCCAGACAGCCCCCTTCTCACTCAGCTGGGCCTGA...GGTCGAGGAGGGGGAAGGAGACCCCTGAGACCTGTTCCTCAGCCTGAAGCGGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR-3UTR TCA 90 bp | TTGTCTTGTCTCAGGGAGTCCACCCTCCCCGCCCTCCTGATCCAGACAACAGCAGCCCTCAGGCCCAGCTaGGTGAGAAGGGGGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: LSCLRESTLPALLIQTTAALRPS*VRRGLS Trigger: AGACAGCCCCCTTCTCACTCAGCTGGGCCTGAGGGC...TGCTGTTGTCTGGATCAGGAGGGCGGGGAGGGTGGACTCCCTGAGACAAGACAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR-3UTR TCA 90 bp | CACCGGTCCCTCAGAGGTGTGGCCCTGTGGGTCTGCCAGCTCCTCTGTCCTTCAGTGGGTCAACGACAGTaGCAGGAGGGATGGACGGTT | + |
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Preference number: 2 (lower is better) Translates to: HRSLRGVALWVCQLLCPSVGQRQ*QEGWTV Trigger: AACCGTCCATCCCTCCTGTCACTGTCGTTGACCCAC...TGAAGGACAGAGGAGCTGGCAGACCCACAGGGCCACACCTCTGAGGGACCGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR-3UTR GCA 90 bp | TTGTCTTGTCTCAGGGAGTCCACCCTCCCCGCCCTCCTGATCCAGACAACAGCAGAGGACTCTGGGAGATaGCCGAGGACTCAGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: LSCLRESTLPALLIQTTAEDSGR*PRTQGG Trigger: GCCTCCCTGAGTCCTCGGGCATCTCCCAGAGTCCTC...TGCTGTTGTCTGGATCAGGAGGGCGGGGAGGGTGGACTCCCTGAGACAAGACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR-3UTR GCA 90 bp | GGACAGAAGACAAGGCAGCAGGCCACGACCACAACAATGCTGTCAGCAGAGGGGGTGGCCCTGTGGGTCTaGCAGCTCCTCTGTCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: GQKTRQQATTTTMLSAEGVALWV*QLLCPS Trigger: TGAAGGACAGAGGAGCTGGCAGACCCACAGGGCCAC...CCCCTCTGCTGACAGCATTGTTGTGGTCGTGGCCTGCTGCCTTGTCTTCTGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR-3UTR TCA 90 bp | GAGGCCAGGCTATACATGGGCATTGGCCCGAGAGGCAGGGAGGACTCTGGGAGATCAGGGAGGCCTGCTTaGGGTCAAAAACCAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: EARLYMGIGPRGREDSGRSGRPA*GQKPEE Trigger: CTCTTCTGGTTTTTGACCTCAAGCAGGCCTCCCTGA...TCTCCCAGAGTCCTCCCTGCCTCTCGGGCCAATGCCCATGTATAGCCTGGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCCGCCCTCCTGATCCAGACAACAGCAAGAACAAGATGAAAACACAGGGAAGAGGAGCCTGGCACTaGCACGGAGGAGGCAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: PPRPPDPDNSKNKMKTQGRGAWH*HGGGKA Trigger: GGCTTTGCCTCCTCCGTGCCAGTGCCAGGCTCCTCT...TCCCTGTGTTTTCATCTTGTTCTTGCTGTTGTCTGGATCAGGAGGGCGGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR-3UTR CCA 90 bp | AACGAGAGAGGGTACTTTTCCAGAGAGTGGGAGGGCATCTCAAGTGGGTCAACGATAGAGAGAGGAGCCTaGCACTGGCACGGAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: NERGYFSREWEGISSGSTIERGA*HWHGGG Trigger: GCCTCCTCCGTGCCAGTGCCAGGCTCCTCTCTCTAT...CGTTGACCCACTTGAGATGCCCTCCCACTCTCTGGAAAAGTACCCTCTCTCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCCGCCCTCCTGATCCAGACAACAGCAAGAACAAGATGAAAACACAGGGACCAGCAGCTGTTTTGTaGCTACCTGGGTGCTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: PPRPPDPDNSKNKMKTQGPAAVL*LPGCSL Trigger: CAGAGAGCACCCAGGTAGGCACAAAACAGCTGCTGG...TCCCTGTGTTTTCATCTTGTTCTTGCTGTTGTCTGGATCAGGAGGGCGGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGTCCAGCTGCCTGTGTATCATCTCTGTCACCTCGGAAAATGTTACTATGAGGCAGGGAGGACTCTaGGAGATGCCCGAGGACTCA | + |
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Preference number: 2 (lower is better) Translates to: QKSSCLCIISVTSENVTMRQGGL*EMPEDS Trigger: TGAGTCCTCGGGCATCTCCCAGAGTCCTCCCTGCCT...CATAGTAACATTTTCCGAGGTGACAGAGATGATACACAGGCAGCTGGACTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR-3UTR CCA 90 bp | GCCCTTGGGCCATTGTGGTTTATTGATGCTCATGGCAAGCACAGCACAGAAGGGAAGATCTGGCTCACATaGCACAGAACAGTCATGACT | + |
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Preference number: 2 (lower is better) Translates to: ALGPLWFIDAHGKHSTEGKIWLT*HRTVMT Trigger: AGTCATGACTGTTCTGTGCCATGTGAGCCAGATCTT...CCCTTCTGTGCTGTGCTTGCCATGAGCATCAATAAACCACAATGGCCCAAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR-3UTR TCA 90 bp | GCCCTTGGGCCATTGTGGTTTATTGATGCTCATGGCAAGCACAGCACAGAAGGGGCGAGAGAGATTTGCTaGGGAATGTATAGAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: ALGPLWFIDAHGKHSTEGAREIC*GMYRRK Trigger: CTTTCTTCTATACATTCCTCAGCAAATCTCTCTCGC...CCCTTCTGTGCTGTGCTTGCCATGAGCATCAATAAACCACAATGGCCCAAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR TCA 72 bp | CACTGGCACGGAGGAGGCAAAGCCCTCAGGCCCAGCTaGGTGAGAAGGGGGCTGTCTGGGGTAGCCCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: HWHGGGKALRPS*VRRGLSGVALS Trigger: ACTCAGGGCTACCCCAGACAGCCCCCTTCTCACTCAGCTGGGCCTGAGGGCTTTGCCTCCTCCGTGCCAGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR CCA 72 bp | CCAGCCATTCACCGGTCCCTCAGAGGTGTGGCCCTGTaGGTCTGCCAGCTCCTCTGTCCTTCACAGAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: PAIHRSLRGVAL*VCQLLCPSQKS Trigger: GGACTTCTGTGAAGGACAGAGGAGCTGGCAGACCCACAGGGCCACACCTCTGAGGGACCGGTGAATGGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR CCA 72 bp | TCTGGTAGCCAGCCATTCACCGGTCCCTCAGAGGTGTaGCCCTGTGGGTCTGCCAGCTCCTCTGTCCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: SGSQPFTGPSEV*PCGSASSSVLH Trigger: GTGAAGGACAGAGGAGCTGGCAGACCCACAGGGCCACACCTCTGAGGGACCGGTGAATGGCTGGCTACCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR CCA 72 bp | CAGCAGTGCAGGAGGTTATTTATAGAGAGAGGAGCCTaGCACTGGCACGGAGGAGGCAAAGCCCTCAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: QQCRRLFIERGA*HWHGGGKALRP Trigger: GGGCCTGAGGGCTTTGCCTCCTCCGTGCCAGTGCCAGGCTCCTCTCTCTATAAATAACCTCCTGCACTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR TCA 72 bp | GAGAGTGGGAGGGCATCTCAAGTGGGTCAACGACAGTaGCAGGAGGGATGGACGGTTCTCCCATGCGGGAAT | + |
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Preference number: 3 (lower is better) Translates to: ESGRASQVGQRQ*QEGWTVLPCGN Trigger: ATTCCCGCATGGGAGAACCGTCCATCCCTCCTGTCACTGTCGTTGACCCACTTGAGATGCCCTCCCACTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR TCA 72 bp | CAGACCCATCAAGACATGAGGTTACCCGCTTCAGGCTaGGGAACAGGTCTCAGGGGTCTCCTTCCCCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: QTHQDMRLPASG*GTGLRGLLPPP Trigger: AGGAGGGGGAAGGAGACCCCTGAGACCTGTTCCTCAGCCTGAAGCGGGTAACCTCATGTCTTGATGGGTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR GCA 72 bp | AGGACTCTGGGAGATGCCCGAGGACTCAGGGAGGCCTaGTTGAGGTCAAAAACCAGAAGAGGGAAACAGGAA | + |
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Preference number: 3 (lower is better) Translates to: RTLGDARGLREA*LRSKTRRGKQE Trigger: TTCCTGTTTCCCTCTTCTGGTTTTTGACCTCAAGCAGGCCTCCCTGAGTCCTCGGGCATCTCCCAGAGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR CCA 72 bp | AGGGTACTTTTCCAGAGAGTGGGAGGGCATCTCAAGTaGGTCAACGACAGTGACAGGAGGGATGGACGGTTC | + |
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Preference number: 3 (lower is better) Translates to: RVLFQRVGGHLK*VNDSDRRDGRF Trigger: GAACCGTCCATCCCTCCTGTCACTGTCGTTGACCCACTTGAGATGCCCTCCCACTCTCTGGAAAAGTACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR CCA 72 bp | GGAACTCCCCAGGGGATTAGCCCAGAGAGCAAGGGATaGTGTGATAGAGAGCCAAAGATCTGGCTCACATGG | + |
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Preference number: 3 (lower is better) Translates to: GTPQGISPESKG*CDREPKIWLTW Trigger: CCATGTGAGCCAGATCTTTGGCTCTCTATCACACCATCCCTTGCTCTCTGGGCTAATCCCCTGGGGAGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR GCA 72 bp | TGGGTGGGGCTAGGAAGGAGGTACCCCACAGCTTTCTaGATCTATATGGAGGCCAGGCTATACATGGGCATT | + |
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Preference number: 3 (lower is better) Translates to: WVGLGRRYPTAF*IYMEARLYMGI Trigger: AATGCCCATGTATAGCCTGGCCTCCATATAGATGCAGAAAGCTGTGGGGTACCTCCTTCCTAGCCCCACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR CCA 72 bp | GGATGGTGTGATAGAGAGCCAAAGATCTGGCTCACATaGCACAGAACAGTCATGACTCTCAGGCAGAGCGGG | + |
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Preference number: 3 (lower is better) Translates to: GWCDREPKIWLT*HRTVMTLRQSG Trigger: CCCGCTCTGCCTGAGAGTCATGACTGTTCTGTGCCATGTGAGCCAGATCTTTGGCTCTCTATCACACCATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR-3UTR CAA 90 bp | ACCCCACAGCTTTCTGCATCTATATGGAGGCCAGGCTATACATGGGCATTGGCCCTCAGGGAGGCCTGCTaGAGGTCAAAAACCAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: TPQLSASIWRPGYTWALALREAC*RSKTRR Trigger: TCTTCTGGTTTTTGACCTCAAGCAGGCCTCCCTGAG...GGCCAATGCCCATGTATAGCCTGGCCTCCATATAGATGCAGAAAGCTGTGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR GCA 72 bp | GTCTGCCAGCTCCTCTGTCCTTCACAGAAGTCCAGCTaGCTGTGTATCATCTCTGTCACCTCGGAAAATGTT | + |
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Preference number: 3 (lower is better) Translates to: VCQLLCPSQKSS*LCIISVTSENV Trigger: AACATTTTCCGAGGTGACAGAGATGATACACAGGCAGCTGGACTTCTGTGAAGGACAGAGGAGCTGGCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR CCA 72 bp | AAACTAGAAAACGAGAGAGGGTACTTTTCCAGAGAGTaGGAGGGCATCTCAAGTGGGTCAACGACAGTGACA | + |
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Preference number: 3 (lower is better) Translates to: KLENERGYFSRE*EGISSGSTTVT Trigger: TGTCACTGTCGTTGACCCACTTGAGATGCCCTCCCACTCTCTGGAAAAGTACCCTCTCTCGTTTTCTAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR GCA 90 bp | GCCAGGTCCCCAAACCTAAGCCACACATCACGTCCCACCCTCCTGCCCTCCGGCATGCGGCCAGCGATCTaGTCAGCCTTCTCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ARSPNLSHTSRPTLLPSGMRPAI*SAFSCS Trigger: GCTGCAGGAGAAGGCTGAGCAGATCGCTGGCCGCAT...GCCGGAGGGCAGGAGGGTGGGACGTGATGTGTGGCTTAGGTTTGGGGACCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR GCA 90 bp | GCCAGGTCCCCAAACCTAAGCCACACATCACGTCCCACCCTCCTGCCCTCCGGCCAGAGAAGCGGAGCATaGGGCCAGCGATCTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: ARSPNLSHTSRPTLLPSGQRSGA*GQRSAQ Trigger: CTGAGCAGATCGCTGGCCGCATGCTCCGCTTCTCTG...GCCGGAGGGCAGGAGGGTGGGACGTGATGTGTGGCTTAGGTTTGGGGACCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR GCA 90 bp | GCCAGGTCCCCAAACCTAAGCCACACATCACGTCCCACCCTCCTGCCCTCCGGCAGGCTCATGAGCTGGTaGCCGCTGATCTCTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ARSPNLSHTSRPTLLPSGRLMSW*PLISPR Trigger: CCTGGGAGAGATCAGCGGGCACCAGCTCATGAGCCT...GCCGGAGGGCAGGAGGGTGGGACGTGATGTGTGGCTTAGGTTTGGGGACCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CCA 90 bp | CACCGGTCCCTCAGAGGTGTGGCCCTGTGGGTCTGCCAGCTCCTCTGTCCTTCACTGGTGGGGGAGCCGTaGCTACCGCTGTTGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: HRSLRGVALWVCQLLCPSLVGEP*LPLLSF Trigger: GAAGGACAACAGCGGTAGCCACGGCTCCCCCACCAG...TGAAGGACAGAGGAGCTGGCAGACCCACAGGGCCACACCTCTGAGGGACCGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CCA 90 bp | CTATATGGAGGCCAGGCTATACATGGGCATTGGCCCGAGAGGCAGGGAGGACTCGCAGCATGCCGCTGGTaGGGGAGCCGTGGCTACCGC | + |
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Preference number: 4 (lower is better) Translates to: LYGGQAIHGHWPERQGGLAACRW*GSRGYR Trigger: GCGGTAGCCACGGCTCCCCCACCAGCGGCATGCTGC...GAGTCCTCCCTGCCTCTCGGGCCAATGCCCATGTATAGCCTGGCCTCCATATAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR GCA 90 bp | CCAGGGCCCTGTGGGTCACACTCAGTTCTCTCGCTCTGTCAGACCCATCAAGACAGACCCCGTGCAGCATaGCGCTGGTGGGGGAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: PGPCGSHSVLSLCQTHQDRPRAA*RWWGSR Trigger: ACGGCTCCCCCACCAGCGGCATGCTGCACGGGGTCT...GTCTTGATGGGTCTGACAGAGCGAGAGAACTGAGTGTGACCCACAGGGCCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CCA 90 bp | TTGTCTTGTCTCAGGGAGTCCACCCTCCCCGCCCTCCTGATCCAGACAACAGCACGTGCAGCATGCCGCTaGTGGGGGAGCCGTGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: LSCLRESTLPALLIQTTARAACR*WGSRGY Trigger: GTAGCCACGGCTCCCCCACCAGCGGCATGCTGCACG...TGCTGTTGTCTGGATCAGGAGGGCGGGGAGGGTGGACTCCCTGAGACAAGACAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CCA 90 bp | GAGGCCAGGCTATACATGGGCATTGGCCCGAGAGGCAGGGAGGACTCTGGGAGAGAGTCCTGCGGGGGCTaGCCTGTGTTGAACTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: EARLYMGIGPRGREDSGRESCGG*PVLNSV Trigger: CACGGAGTTCAACACAGGCCAGCCCCCGCAGGACTC...TCTCCCAGAGTCCTCCCTGCCTCTCGGGCCAATGCCCATGTATAGCCTGGCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CCA 90 bp | GAGGCCAGGCTATACATGGGCATTGGCCCGAGAGGCAGGGAGGACTCTGGGAGACCCCCAGGGAGCCTTTaGGTGCCAGCACCAAGATGG | + |
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Preference number: 4 (lower is better) Translates to: EARLYMGIGPRGREDSGRPPGSL*VPAPRW Trigger: CCATCTTGGTGCTGGCACCCAAAGGCTCCCTGGGGG...TCTCCCAGAGTCCTCCCTGCCTCTCGGGCCAATGCCCATGTATAGCCTGGCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR TCA 90 bp | CCAGGGCCCTGTGGGTCACACTCAGTTCTCTCGCTCTGTCAGACCCATCAAGACGGTTGGTGCTGGGGTTaGAGAGGCGCTGGGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: PGPCGSHSVLSLCQTHQDGWCWG*RGAGQG Trigger: TCCCTGCCCAGCGCCTCTTCAACCCCAGCACCAACC...GTCTTGATGGGTCTGACAGAGCGAGAGAACTGAGTGTGACCCACAGGGCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR GCA 90 bp | GGACAGAAGACAAGGCAGCAGGCCACGACCACAACAATGCTGTCAGCAGAGGGGCTGAAGAAGACCCCGTaGAGCATGCCGCTGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GQKTRQQATTTTMLSAEGLKKTP*SMPLVG Trigger: CCCCACCAGCGGCATGCTGCACGGGGTCTTCTTCAG...CCCCTCTGCTGACAGCATTGTTGTGGTCGTGGCCTGCTGCCTTGTCTTCTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CCA 90 bp | ACCCGCTTCAGGCTGAGGAACAGGTCTCAGGGGTCTCCTTCCCCCTCCTCGACCGGGCAAGGTGTTCCTTaGCATAGTCCCCAGTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: TRFRLRNRSQGSPSPSSTGQGVP*HSPQCR Trigger: TCTGCACTGGGGACTATGCCAAGGAACACCTTGCCC...GGTCGAGGAGGGGGAAGGAGACCCCTGAGACCTGTTCCTCAGCCTGAAGCGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CCA 90 bp | ACCCGCTTCAGGCTGAGGAACAGGTCTCAGGGGTCTCCTTCCCCCTCCTCGACCTCCCACAGTGGGTCCTaGCATGCTGGAAGTACTCCT | + |
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Preference number: 4 (lower is better) Translates to: TRFRLRNRSQGSPSPSSTSHSGS*HAGSTP Trigger: AGGAGTACTTCCAGCATGCCAGGACCCACTGTGGGA...GGTCGAGGAGGGGGAAGGAGACCCCTGAGACCTGTTCCTCAGCCTGAAGCGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR GCA 90 bp | CACCGGTCCCTCAGAGGTGTGGCCCTGTGGGTCTGCCAGCTCCTCTGTCCTTCATGCTTCACCGCAGTCTaGACTGCCACACTGTACTCT | + |
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Preference number: 4 (lower is better) Translates to: HRSLRGVALWVCQLLCPSCFTAV*TATLYS Trigger: AGAGTACAGTGTGGCAGTGCAGACTGCGGTGAAGCA...TGAAGGACAGAGGAGCTGGCAGACCCACAGGGCCACACCTCTGAGGGACCGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CCA 90 bp | GGTGGGGCTAGGAAGGAGGTACCCCACAGCTTTCTGCATCTATATGGAGGCCAGGCAGAGGCACGGCCTTaGCCACAAGCTTGGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GGARKEVPHSFLHLYGGQAEARP*PQAWWG Trigger: TCCCCACCAAGCTTGTGGCCAAGGCCGTGCCTCTGC...CTGGCCTCCATATAGATGCAGAAAGCTGTGGGGTACCTCCTTCCTAGCCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CCA 90 bp | ACCCGCTTCAGGCTGAGGAACAGGTCTCAGGGGTCTCCTTCCCCCTCCTCGACCGTGCCAGCACCAAGATaGCATAGTGGTAGGCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: TRFRLRNRSQGSPSPSSTVPAPR*HSGRLC Trigger: ACACAGCCTACCACTATGCCATCTTGGTGCTGGCAC...GGTCGAGGAGGGGGAAGGAGACCCCTGAGACCTGTTCCTCAGCCTGAAGCGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR TCA 90 bp | CTATATGGAGGCCAGGCTATACATGGGCATTGGCCCGAGAGGCAGGGAGGACTCACTCCGTGTTGCAGCTaGAGAAGACCCCGTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYGGQAIHGHWPERQGGLTPCCS*RRPRAA Trigger: TGCTGCACGGGGTCTTCTTCAGCTGCAACACGGAGT...GAGTCCTCCCTGCCTCTCGGGCCAATGCCCATGTATAGCCTGGCCTCCATATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR GCA 90 bp | GGACAGAAGACAAGGCAGCAGGCCACGACCACAACAATGCTGTCAGCAGAGGGGCACCGCAGTCTGCACTaGCACACTGTACTCTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GQKTRQQATTTTMLSAEGHRSLH*HTVLCP Trigger: CGGACAGAGTACAGTGTGGCAGTGCAGACTGCGGTG...CCCCTCTGCTGACAGCATTGTTGTGGTCGTGGCCTGCTGCCTTGTCTTCTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CCA 90 bp | AACGAGAGAGGGTACTTTTCCAGAGAGTGGGAGGGCATCTCAAGTGGGTCAACGGGCCTCTCACCGTCATaGGCAGAGGCACGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NERGYFSREWEGISSGSTGLSPS*AEARPW Trigger: CCAAGGCCGTGCCTCTGCCCATGACGGTGAGAGGCC...CGTTGACCCACTTGAGATGCCCTCCCACTCTCTGGAAAAGTACCCTCTCTCGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CCA 90 bp | ACCTTCCGTTGTCTCCAACGTAGGGAGGAGGGGGTAGTGGACAAAGTGGAGGGAGGACTCAGGAACCAGTaGCCTCTCACCGTCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TFRCLQRREEGVVDKVEGGLRNQ*PLTVMG Trigger: GCCCATGACGGTGAGAGGCCACTGGTTCCTGAGTCC...TCCCTCCACTTTGTCCACTACCCCCTCCTCCCTACGTTGGAGACAACGGAAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR CAA 72 bp | TCTGCATCTATATGGAGGCCAGGCTATACATGGGCATaGGCCCGAGAGGCAGGGAGGACTCTGGGAGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SASIWRPGYTWA*AREAGRTLGDA Trigger: GGCATCTCCCAGAGTCCTCCCTGCCTCTCGGGCCAATGCCCATGTATAGCCTGGCCTCCATATAGATGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CCA 90 bp | GAAAACGAGAGAGGGTACTTTTCCAGAGAGTGGGAGGGCATCTCAAGTGGGTCAGGGTTGAAGAGGCGCTaGGCAGGGATCTGGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ENERGYFSREWEGISSGSGLKRR*AGIWKR Trigger: GCGCTTCCAGATCCCTGCCCAGCGCCTCTTCAACCC...TGACCCACTTGAGATGCCCTCCCACTCTCTGGAAAAGTACCCTCTCTCGTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CCA 90 bp | CCTCCCCGCCCTCCTGATCCAGACAACAGCAAGAACAAGATGAAAACACAGGGAGCCTTCTCCTGCAGCTaGGCAAGGTGTTCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPRPPDPDNSKNKMKTQGAFSCS*ARCSLA Trigger: TGCCAAGGAACACCTTGCCCAGCTGCAGGAGAAGGC...TCCCTGTGTTTTCATCTTGTTCTTGCTGTTGTCTGGATCAGGAGGGCGGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR CAA 72 bp | ACTCTGGGAGATGCCCGAGGACTCAGGGAGGCCTGCTaGAGGTCAAAAACCAGAAGAGGGAAACAGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLGDARGLREAC*RSKTRRGKQER Trigger: CCTTTCCTGTTTCCCTCTTCTGGTTTTTGACCTCAAGCAGGCCTCCCTGAGTCCTCGGGCATCTCCCAGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR GCA 90 bp | GAAAACGAGAGAGGGTACTTTTCCAGAGAGTGGGAGGGCATCTCAAGTGGGTCATGCTCAGCCTTCTCCTaGAGCTGGGCAAGGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ENERGYFSREWEGISSGSCSAFS*SWARCS Trigger: GGAACACCTTGCCCAGCTGCAGGAGAAGGCTGAGCA...TGACCCACTTGAGATGCCCTCCCACTCTCTGGAAAAGTACCCTCTCTCGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR GCA 90 bp | GCCCTTGGGCCATTGTGGTTTATTGATGCTCATGGCAAGCACAGCACAGAAGGGCAGGGAGCCTTTGGGTaGCAGCACCAAGATGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: ALGPLWFIDAHGKHSTEGQGAFG*QHQDGI Trigger: TATGCCATCTTGGTGCTGGCACCCAAAGGCTCCCTG...CCCTTCTGTGCTGTGCTTGCCATGAGCATCAATAAACCACAATGGCCCAAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CCA 90 bp | ACCCCACAGCTTTCTGCATCTATATGGAGGCCAGGCTATACATGGGCATTGGCCGGTCACTGTCCTCCATaGCCCAGGAGATACGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPQLSASIWRPGYTWALAGHCPP*PRRYGK Trigger: CTTTCCGTATCTCCTGGGCCATGGAGGACAGTGACC...GGCCAATGCCCATGTATAGCCTGGCCTCCATATAGATGCAGAAAGCTGTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR TCA 90 bp | AAAACGAGAGAGGGTACTTTTCCAGAGAGTGGGAGGGCATCTCAAGTGGGTCAATCCAAGATGAGGTCCTaGGCGTGGCGGAAGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTREGTFPESGRASQVGQSKMRS*AWRKIS Trigger: GCTGATCTTCCGCCACGCTCAGGACCTCATCTTGGA...TTGACCCACTTGAGATGCCCTCCCACTCTCTGGAAAAGTACCCTCTCTCGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR GCA 90 bp | GGTGGGGCTAGGAAGGAGGTACCCCACAGCTTTCTGCATCTATATGGAGGCCAGGTGGGGACATCTCGGTaGTTGAACTTGTTGGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: GGARKEVPHSFLHLYGGQVGTSR*LNLLEF Trigger: GAATTCCAACAAGTTCAAGCACCGAGATGTCCCCAC...CTGGCCTCCATATAGATGCAGAAAGCTGTGGGGTACCTCCTTCCTAGCCCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR GCA 90 bp | ACCTTCCGTTGTCTCCAACGTAGGGAGGAGGGGGTAGTGGACAAAGTGGAGGGAACTCCTTGTGATGGTTaGGGTAGAACACAGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TFRCLQRREEGVVDKVEGTPCDG*GRTQRS Trigger: GCTTCTCTGTGTTCTACCGCAACCATCACAAGGAGT...TCCCTCCACTTTGTCCACTACCCCCTCCTCCCTACGTTGGAGACAACGGAAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
||
| CDS-3UTR GCA 90 bp | CCTCCCCGCCCTCCTGATCCAGACAACAGCAAGAACAAGATGAAAACACAGGGACTCCATCCTCCACACTaGAGGTCAGGAACTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPRPPDPDNSKNKMKTQGLHPPH*RSGTCC Trigger: GCAACAAGTTCCTGACCTGCAGTGTGGAGGATGGAG...TCCCTGTGTTTTCATCTTGTTCTTGCTGTTGTCTGGATCAGGAGGGCGGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| 3UTR CAA 72 bp | CCTCTTCTCTACATAGTTCCCAGGATCCCAGATCTCTaGGCCCATCCCATGAGGTACCTGACTGTCTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLLYIVPRIPDL*AHPMRYLTVYQ Trigger: CTGGTAGACAGTCAGGTACCTCATGGGATGGGCCAAGAGATCTGGGATCCTGGGAACTATGTAGAGAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR GCA 90 bp | CCTCCCCGCCCTCCTGATCCAGACAACAGCAAGAACAAGATGAAAACACAGGGATACTCTCCATCACTCTaGTTCACCGCAGTCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PPRPPDPDNSKNKMKTQGYSPSL*FTAVCT Trigger: AGTGCAGACTGCGGTGAAGCAGAGTGATGGAGAGTA...TCCCTGTGTTTTCATCTTGTTCTTGCTGTTGTCTGGATCAGGAGGGCGGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR GCA 90 bp | TCTCTACATAGTTCCCAGGATCCCAGATCTCTTGGCCCATCCCATGAGGTACCTAGGTCAGGAACTTGTTaGAGGCAATGTCCAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLHSSQDPRSLGPSHEVPRSGTC*RQCPGG Trigger: CCCTCCTGGACATTGCCTGCAACAAGTTCCTGACCT...AGGTACCTCATGGGATGGGCCAAGAGATCTGGGATCCTGGGAACTATGTAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR TCA 90 bp | GGGGGATCAGGGGCAGCCAGGGCAAGACAGCAGTGCAGGAGGTTATTTATAGAGGGACATCTCGGTGCTTaGACTTGTTGGAATTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GGSGAARARQQCRRLFIEGHLGA*TCWNSY Trigger: ATAAGAATTCCAACAAGTTCAAGCACCGAGATGTCC...CTCTATAAATAACCTCCTGCACTGCTGTCTTGCCCTGGCTGCCCCTGATCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
||
| CDS-3UTR CAA 90 bp | CCAGGGCCCTGTGGGTCACACTCAGTTCTCTCGCTCTGTCAGACCCATCAAGACGGCAGAGGCACGGCCTaGGCCACAAGCTTGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGPCGSHSVLSLCQTHQDGRGTA*ATSLVG Trigger: CCCCACCAAGCTTGTGGCCAAGGCCGTGCCTCTGCC...GTCTTGATGGGTCTGACAGAGCGAGAGAACTGAGTGTGACCCACAGGGCCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS CCA 90 bp | TGTACTCTGTCCGGGGACTCAGGAACCAGTGGCCTCTCACCGTCATaGGCAGAGGCACGGCCTTGGCCACAAGCTTGGTGGGGACATCTC | + |
|
Preference number: 5 (lower is better) Translates to: CTLSGDSGTSGLSPS*AEARPWPQAWWGHL Trigger: GAGATGTCCCCACCAAGCTTGTGGCCAAGGCCGTGCCTCTGCCCATGACGGTGAGAGGCCACTGGTTCCTGAGTCCCCGGACAGAGTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003561.10 ENSMUST00000159180.2 |
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| CDS CCA 90 bp | GGAGGGGCAGCCGGTCACGACAGAAGCGGTCCCCCAGGGAGCCTTTaGGTGCCAGCACCAAGATGGCATAGTGGTAGGCTGTGTACATAC | + |
|
Preference number: 5 (lower is better) Translates to: GGAAGHDRSGPPGSL*VPAPRWHSGRLCTY Trigger: GTATGTACACAGCCTACCACTATGCCATCTTGGTGCTGGCACCCAAAGGCTCCCTGGGGGACCGCTTCTGTCGTGACCGGCTGCCCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CAA 90 bp | GGACAGAAGACAAGGCAGCAGGCCACGACCACAACAATGCTGTCAGCAGAGGGGGGGGGCTGGCCTGTGTaGAACTCCGTGTTGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GQKTRQQATTTTMLSAEGGGWPV*NSVLQL Trigger: CAGCTGCAACACGGAGTTCAACACAGGCCAGCCCCC...CCCCTCTGCTGACAGCATTGTTGTGGTCGTGGCCTGCTGCCTTGTCTTCTGTCC 61% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS GCA 90 bp | CAGCCAGACACCAGGTACTCTCCATCACTCTGCTTCACCGCAGTCTaGACTGCCACACTGTACTCTGTCCGGGGACTCAGGAACCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QPDTRYSPSLCFTAV*TATLYSVRGLRNQW Trigger: CCACTGGTTCCTGAGTCCCCGGACAGAGTACAGTGTGGCAGTGCAGACTGCGGTGAAGCAGAGTGATGGAGAGTACCTGGTGTCTGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS GCA 90 bp | GGAAGATCAGCTCTCCATCCTCCACACTGCAGGTCAGGAACTTGTTaGAGGCAATGTCCAGGAGGGGCAGCCGGTCACGACAGAAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GRSALHPPHCRSGTC*RQCPGGAAGHDRSG Trigger: ACCGCTTCTGTCGTGACCGGCTGCCCCTCCTGGACATTGCCTGCAACAAGTTCCTGACCTGCAGTGTGGAGGATGGAGAGCTGATCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS GCA 90 bp | AGACACCAGGTACTCTCCATCACTCTGCTTCACCGCAGTCTGCACTaGCACACTGTACTCTGTCCGGGGACTCAGGAACCAGTGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RHQVLSITLLHRSLH*HTVLCPGTQEPVAS Trigger: AGAGGCCACTGGTTCCTGAGTCCCCGGACAGAGTACAGTGTGGCAGTGCAGACTGCGGTGAAGCAGAGTGATGGAGAGTACCTGGTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS GCA 90 bp | TCCACAGTCTCACTCCAGCCAGACACCAGGTACTCTCCATCACTCTaGTTCACCGCAGTCTGCACTGCCACACTGTACTCTGTCCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: STVSLQPDTRYSPSL*FTAVCTATLYSVRG Trigger: TCCCCGGACAGAGTACAGTGTGGCAGTGCAGACTGCGGTGAAGCAGAGTGATGGAGAGTACCTGGTGTCTGGCTGGAGTGAGACTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS GCA 90 bp | AGTACTCCTTGTGATGGTTGCGGTAGAACACAGAGAAGCGGAGCATaGGGCCAGCGATCTGCTCAGCCTTCTCCTGCAGCTGGGCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: STPCDGCGRTQRSGA*GQRSAQPSPAAGQG Trigger: ACCTTGCCCAGCTGCAGGAGAAGGCTGAGCAGATCGCTGGCCGCATGCTCCGCTTCTCTGTGTTCTACCGCAACCATCACAAGGAGTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS GCA 90 bp | TCCCACAGTGGGTCCTGGCATGCTGGAAGTACTCCTTGTGATGGTTaGGGTAGAACACAGAGAAGCGGAGCATGCGGCCAGCGATCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHSGSWHAGSTPCDG*GRTQRSGACGQRSA Trigger: AGCAGATCGCTGGCCGCATGCTCCGCTTCTCTGTGTTCTACCGCAACCATCACAAGGAGTACTTCCAGCATGCCAGGACCCACTGTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CAA 90 bp | AAGACAAGGCAGCAGGCCACGACCACAACAATGCTGTCAGCAGAGGGGAAGGGCGTGTTGAACTCCGTGTaGCAGCTGAAGAAGACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: KTRQQATTTTMLSAEGKGVLNSV*QLKKTP Trigger: CGGGGTCTTCTTCAGCTGCAACACGGAGTTCAACAC...GCCCTTCCCCTCTGCTGACAGCATTGTTGTGGTCGTGGCCTGCTGCCTTGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CAA 90 bp | GGTGGGGCTAGGAAGGAGGTACCCCACAGCTTTCTGCATCTATATGGAGGCCAGCAGGTCAGGAACTTGTaGCAGGCAATGTCCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGARKEVPHSFLHLYGGQQVRNL*QAMSRR Trigger: CCTCCTGGACATTGCCTGCAACAAGTTCCTGACCTG...CTGGCCTCCATATAGATGCAGAAAGCTGTGGGGTACCTCCTTCCTAGCCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CAA 90 bp | GAAAACGAGAGAGGGTACTTTTCCAGAGAGTGGGAGGGCATCTCAAGTGGGTCACGGCCCACGCTGATGTaGCAGGTCTTGCAGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ENERGYFSREWEGISSGSRPTLM*QVLQLG Trigger: TCCCAGCTGCAAGACCTGCAACATCAGCGTGGGCCG...TGACCCACTTGAGATGCCCTCCCACTCTCTGGAAAAGTACCCTCTCTCGTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CAA 90 bp | CACCGGTCCCTCAGAGGTGTGGCCCTGTGGGTCTGCCAGCTCCTCTGTCCTTCACGGTGCTTGAACTTGTaGGAATTCTTATTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HRSLRGVALWVCQLLCPSRCLNL*EFLFSF Trigger: GAAGGAGAATAAGAATTCCAACAAGTTCAAGCACCG...TGAAGGACAGAGGAGCTGGCAGACCCACAGGGCCACACCTCTGAGGGACCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CAA 90 bp | AAAACGAGAGAGGGTACTTTTCCAGAGAGTGGGAGGGCATCTCAAGTGGGTCAAGCCTTGGCCACAAGCTaGGTGGGGACATCTCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KTREGTFPESGRASQVGQALATS*VGTSRC Trigger: GCACCGAGATGTCCCCACCAAGCTTGTGGCCAAGGC...TTGACCCACTTGAGATGCCCTCCCACTCTCTGGAAAAGTACCCTCTCTCGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CAA 90 bp | GGTGGGGCTAGGAAGGAGGTACCCCACAGCTTTCTGCATCTATATGGAGGCCAGGAGTCACAGGTGATATaGTTGATCTCGATGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGARKEVPHSFLHLYGGQESQVI*LISMLW Trigger: CCACAGCATCGAGATCAACAATATCACCTGTGACTC...CTGGCCTCCATATAGATGCAGAAAGCTGTGGGGTACCTCCTTCCTAGCCCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CAA 90 bp | GGTGGGGCTAGGAAGGAGGTACCCCACAGCTTTCTGCATCTATATGGAGGCCAGGGGACATCTCGGTGCTaGAACTTGTTGGAATTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GGARKEVPHSFLHLYGGQGTSRC*NLLEFL Trigger: TAAGAATTCCAACAAGTTCAAGCACCGAGATGTCCC...CTGGCCTCCATATAGATGCAGAAAGCTGTGGGGTACCTCCTTCCTAGCCCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CAA 90 bp | GAAAACGAGAGAGGGTACTTTTCCAGAGAGTGGGAGGGCATCTCAAGTGGGTCATCACAGGTGATATTGTaGATCTCGATGCTGTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ENERGYFSREWEGISSGSSQVIL*ISMLWG Trigger: CCCCCACAGCATCGAGATCAACAATATCACCTGTGA...TGACCCACTTGAGATGCCCTCCCACTCTCTGGAAAAGTACCCTCTCTCGTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CAA 90 bp | CAGAAGTCCAGCTGCCTGTGTATCATCTCTGTCACCTCGGAAAATGTTACTATGCTGCAGGTCAGGAACTaGTTGCAGGCAATGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QKSSCLCIISVTSENVTMLQVRN*LQAMSR Trigger: CCTGGACATTGCCTGCAACAAGTTCCTGACCTGCAG...CATAGTAACATTTTCCGAGGTGACAGAGATGATACACAGGCAGCTGGACTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS-3UTR CAA 90 bp | GTCTGCCAGCTCCTCTGTCCTTCACAGAAGTCCAGCTGCCTGTGTATCATCTCTTCTCGGTGCTTGAACTaGTTGGAATTCTTATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCQLLCPSQKSSCLCIISSRCLN*LEFLFS Trigger: GGAGAATAAGAATTCCAACAAGTTCAAGCACCGAGA...AGAGATGATACACAGGCAGCTGGACTTCTGTGAAGGACAGAGGAGCTGGCAGAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS CCA 72 bp | TCCGGGGACTCAGGAACCAGTGGCCTCTCACCGTCATaGGCAGAGGCACGGCCTTGGCCACAAGCTTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SGDSGTSGLSPS*AEARPWPQAWW Trigger: CCACCAAGCTTGTGGCCAAGGCCGTGCCTCTGCCCATGACGGTGAGAGGCCACTGGTTCCTGAGTCCCCGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003561.10 ENSMUST00000159180.2 |
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| CDS CCA 72 bp | GCCACACTGTACTCTGTCCGGGGACTCAGGAACCAGTaGCCTCTCACCGTCATGGGCAGAGGCACGGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ATLYSVRGLRNQ*PLTVMGRGTAL Trigger: CAAGGCCGTGCCTCTGCCCATGACGGTGAGAGGCCACTGGTTCCTGAGTCCCCGGACAGAGTACAGTGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003561.10 ENSMUST00000159180.2 |
||
| CDS CCA 72 bp | GCCGGTCACGACAGAAGCGGTCCCCCAGGGAGCCTTTaGGTGCCAGCACCAAGATGGCATAGTGGTAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AGHDRSGPPGSL*VPAPRWHSGRL Trigger: CAGCCTACCACTATGCCATCTTGGTGCTGGCACCCAAAGGCTCCCTGGGGGACCGCTTCTGTCGTGACCGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
||
| CDS CAA 72 bp | CAGTGGCCTCTCACCGTCATGGGCAGAGGCACGGCCTaGGCCACAAGCTTGGTGGGGACATCTCGGTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QWPLTVMGRGTA*ATSLVGTSRCL Trigger: CAAGCACCGAGATGTCCCCACCAAGCTTGTGGCCAAGGCCGTGCCTCTGCCCATGACGGTGAGAGGCCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003561.10 ENSMUST00000159180.2 |
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| CDS GCA 72 bp | GCTCTCCATCCTCCACACTGCAGGTCAGGAACTTGTTaGAGGCAATGTCCAGGAGGGGCAGCCGGTCACGAC | + |
|
Preference number: 6 (lower is better) Translates to: ALHPPHCRSGTC*RQCPGGAAGHD Trigger: GTCGTGACCGGCTGCCCCTCCTGGACATTGCCTGCAACAAGTTCCTGACCTGCAGTGTGGAGGATGGAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
||
| CDS CAA 90 bp | CTCAGGAACCAGTGGCCTCTCACCGTCATGGGCAGAGGCACGGCCTaGGCCACAAGCTTGGTGGGGACATCTCGGTGCTTGAACTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LRNQWPLTVMGRGTA*ATSLVGTSRCLNLL Trigger: CAACAAGTTCAAGCACCGAGATGTCCCCACCAAGCTTGTGGCCAAGGCCGTGCCTCTGCCCATGACGGTGAGAGGCCACTGGTTCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003561.10 ENSMUST00000159180.2 |
||
| CDS CAA 90 bp | CGGAAGATCAGCTCTCCATCCTCCACACTGCAGGTCAGGAACTTGTaGCAGGCAATGTCCAGGAGGGGCAGCCGGTCACGACAGAAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RKISSPSSTLQVRNL*QAMSRRGSRSRQKR Trigger: CCGCTTCTGTCGTGACCGGCTGCCCCTCCTGGACATTGCCTGCAACAAGTTCCTGACCTGCAGTGTGGAGGATGGAGAGCTGATCTTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS CAA 90 bp | TGGCGGAAGATCAGCTCTCCATCCTCCACACTGCAGGTCAGGAACTaGTTGCAGGCAATGTCCAGGAGGGGCAGCCGGTCACGACAGAAG | + |
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Preference number: 6 (lower is better) Translates to: WRKISSPSSTLQVRN*LQAMSRRGSRSRQK Trigger: CTTCTGTCGTGACCGGCTGCCCCTCCTGGACATTGCCTGCAACAAGTTCCTGACCTGCAGTGTGGAGGATGGAGAGCTGATCTTCCGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS GCA 72 bp | ACCAGGTACTCTCCATCACTCTGCTTCACCGCAGTCTaGACTGCCACACTGTACTCTGTCCGGGGACTCAGG | + |
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Preference number: 6 (lower is better) Translates to: TRYSPSLCFTAV*TATLYSVRGLR Trigger: CCTGAGTCCCCGGACAGAGTACAGTGTGGCAGTGCAGACTGCGGTGAAGCAGAGTGATGGAGAGTACCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS GCA 72 bp | TGTGATGGTTGCGGTAGAACACAGAGAAGCGGAGCATaGGGCCAGCGATCTGCTCAGCCTTCTCCTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: CDGCGRTQRSGA*GQRSAQPSPAA Trigger: AGCTGCAGGAGAAGGCTGAGCAGATCGCTGGCCGCATGCTCCGCTTCTCTGTGTTCTACCGCAACCATCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS GCA 72 bp | GGGTCCTGGCATGCTGGAAGTACTCCTTGTGATGGTTaGGGTAGAACACAGAGAAGCGGAGCATGCGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GSWHAGSTPCDG*GRTQRSGACGQ Trigger: CTGGCCGCATGCTCCGCTTCTCTGTGTTCTACCGCAACCATCACAAGGAGTACTTCCAGCATGCCAGGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS CCA 72 bp | GCTCAGCCTTCTCCTGCAGCTGGGCAAGGTGTTCCTTaGCATAGTCCCCAGTGCAGAACTCCACAGTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: AQPSPAAGQGVP*HSPQCRTPQSH Trigger: GTGAGACTGTGGAGTTCTGCACTGGGGACTATGCCAAGGAACACCTTGCCCAGCTGCAGGAGAAGGCTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS CAA 72 bp | ACCGTCATGGGCAGAGGCACGGCCTTGGCCACAAGCTaGGTGGGGACATCTCGGTGCTTGAACTTGTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: TVMGRGTALATS*VGTSRCLNLLE Trigger: TTCCAACAAGTTCAAGCACCGAGATGTCCCCACCAAGCTTGTGGCCAAGGCCGTGCCTCTGCCCATGACGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003561.10 ENSMUST00000159180.2 |
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| CDS GCA 72 bp | GAGCGTGGCGGAAGATCAGCTCTCCATCCTCCACACTaGAGGTCAGGAACTTGTTGCAGGCAATGTCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: ERGGRSALHPPH*RSGTCCRQCPG Trigger: TCCTGGACATTGCCTGCAACAAGTTCCTGACCTGCAGTGTGGAGGATGGAGAGCTGATCTTCCGCCACGCTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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| CDS GCA 72 bp | TCACTCCAGCCAGACACCAGGTACTCTCCATCACTCTaGTTCACCGCAGTCTGCACTGCCACACTGTACTCT | + |
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Preference number: 6 (lower is better) Translates to: SLQPDTRYSPSL*FTAVCTATLYS Trigger: AGAGTACAGTGTGGCAGTGCAGACTGCGGTGAAGCAGAGTGATGGAGAGTACCTGGTGTCTGGCTGGAGTGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003561.10 |
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