RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHYH (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026664

Ensembl transcript IDs: ENSMUST00000027975.8

Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp AGAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGTTCAGGCTGGAAACTaGCAGGGGAAGCCAACCCTG +
Preference number: 4 (lower is better)
Translates to: RGGDSILLCSSGCTRTLDVQAGN*QGKPTL
Trigger: CAGGGTTGGCTTCCCCTGCCAGTTTCCAGCCTGAAC...ATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR GCA 90 bp GGGAAAGAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCACTGGCAGTCAGAGCTaGCGAAGTGGCAGGAAATTG +
Preference number: 4 (lower is better)
Translates to: GKEEEIASFCVAQAVLELTGSQS*RSGRKL
Trigger: CAATTTCCTGCCACTTCGGCAGCTCTGACTGCCAGT...GAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTCTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CCA 90 bp GATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGCTCCTGTCTGGAATTGTTCAGGCTaGAAACTGGCAGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: DSILLCSSGCTRTLDAPVWNCSG*KLAGEA
Trigger: GGCTTCCCCTGCCAGTTTCCAGCCTGAACAATTCCA...GACAGGAGCATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CCA 90 bp GGGAAAGAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTTCCGACCAGATCCATaGATGAGCAGAGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GKEEEIASFCVAQAVLELFRPDP*MSRGWK
Trigger: CTTCCACCCTCTGCTCATCCATGGATCTGGTCGGAA...GAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTCTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR TCA 90 bp ATGGGGGAAAGAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAGACCAGATCCATGGATaGGCAGAGGGTGGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: MGERGGDSILLCSSGCTRDQIHG*AEGGRK
Trigger: TTTTCTTCCACCCTCTGCTCATCCATGGATCTGGTC...TCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTCTTTCCCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR GCA 90 bp GAAAGAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCCATGTGGCTTCAGAGTaGCTTTGTGGGTACCTGGGA +
Preference number: 4 (lower is better)
Translates to: ERGGDSILLCSSGCTRTLHVASE*LCGYLG
Trigger: TCCCAGGTACCCACAAAGGCACTCTGAAGCCACATG...GAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CCA 90 bp TTGTTTATGGGGGAAAGAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTGCCTTTGTGGGTACCTaGGAGCACAACCAGACAACC +
Preference number: 4 (lower is better)
Translates to: LFMGERGGDSILLCSSGCAFVGT*EHNQTT
Trigger: GGTTGTCTGGTTGTGCTCCCAGGTACCCACAAAGGC...ACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTCTTTCCCCCATAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CCA 90 bp GAAAGAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCCACCTCCCTCCCACTTaGGGTAATCATGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ERGGDSILLCSSGCTRTLHLPPT*GNHVAS
Trigger: TGAAGCCACATGATTACCCCAAGTGGGAGGGAGGTG...GAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR TCA 90 bp GGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGCTCCTTTCTCTGCTCCAGGGTaGGGACATTATTATCCAGAG +
Preference number: 4 (lower is better)
Translates to: GDSILLCSSGCTRTLDAPFSAPG*GHYYPE
Trigger: CTCTGGATAATAATGTCCTCACCCTGGAGCAGAGAA...AGGAGCATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR TCA 90 bp GATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGCTCCTGTCGGAGAAGGCAGTATCTaGAGAGCTCCTCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: DSILLCSSGCTRTLDAPVGEGSI*RAPHLL
Trigger: AAGAAGATGAGGAGCTCTTCAGATACTGCCTTCTCC...GACAGGAGCATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CCA 90 bp TTGTTTATGGGGGAAAGAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTTTCAGAGTGCCTTTGTaGGTACCTGGGAGCACAACC +
Preference number: 4 (lower is better)
Translates to: LFMGERGGDSILLCSSGCFRVPL*VPGSTT
Trigger: GGTTGTGCTCCCAGGTACCCACAAAGGCACTCTGAA...ACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTCTTTCCCCCATAAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CCA 90 bp GAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGCTTGGGGTAATCATGTaGCTTCAGAGTGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: EEEIASFCVAQAVLELSMLGVIM*LQSAFV
Trigger: CACAAAGGCACTCTGAAGCCACATGATTACCCCAAG...CATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR GCA 90 bp GAAAGAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGAAGTGGCAGGAAATTaGTTTCCGGAAGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: ERGGDSILLCSSGCTRTLEVAGN*FPEALS
Trigger: ACTCAAGGCTTCCGGAAAGCAATTTCCTGCCACTTC...GAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CCA 90 bp GGGAAAGAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCCATTATAACGATCCCTaGTGGTTTCACCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GKEEEIASFCVAQAVLELHYNDP*WFHLLS
Trigger: AGAGAGGAGGTGAAACCACCAGGGATCGTTATAATG...GAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTCTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CCA 90 bp GATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGCTCCTGTCCTTCTTGCCAACATCTaGAGGCTTGTTGATCAGCAT +
Preference number: 4 (lower is better)
Translates to: DSILLCSSGCTRTLDAPVLLANI*RLVDQH
Trigger: ATGCTGATCAACAAGCCTCCAGATGTTGGCAAGAAG...GACAGGAGCATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CCA 90 bp GGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGCTCCTTGTCAATGTGCTCCATaGCTGTCCAAGCACAAACAA +
Preference number: 4 (lower is better)
Translates to: GDSILLCSSGCTRTLDAPCQCAP*LSKHKQ
Trigger: TTGTTTGTGCTTGGACAGCCATGGAGCACATTGACA...AGGAGCATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR GCA 90 bp GAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGGTTTCACCTCCTCTCTaGAGATTCTTTCAAACTCTG +
Preference number: 4 (lower is better)
Translates to: EEEIASFCVAQAVLELSMVSPPL*RFFQTL
Trigger: CAGAGTTTGAAAGAATCTGCAGAGAGGAGGTGAAAC...CATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR GCA 90 bp ATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGCTCCTGTCTCAGACTTGATCAGCATCCCATaGAGAGCCATAATATTGGGT +
Preference number: 4 (lower is better)
Translates to: ILLCSSGCTRTLDAPVSDLISIP*RAIILG
Trigger: ACCCAATATTATGGCTCTGCATGGGATGCTGATCAA...GTCTGAGACAGGAGCATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR GCA 90 bp ATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGCTCCTGTCTCAGACCATATAATCCTGTTTTaGAAGGGCCACATCTCTCAT +
Preference number: 4 (lower is better)
Translates to: ILLCSSGCTRTLDAPVSDHIILF*KGHISH
Trigger: ATGAGAGATGTGGCCCTTGCAAAACAGGATTATATG...GTCTGAGACAGGAGCATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR GCA 90 bp TTGTTTATGGGGGAAAGAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTTTGTTTCTGTCAATGTaGTCCATGGCTGTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: LFMGERGGDSILLCSSGCLFLSM*SMAVQA
Trigger: TGCTTGGACAGCCATGGAGCACATTGACAGAAACAA...ACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTCTTTCCCCCATAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CCA 90 bp AGAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATCAATATTTTCTTGACTaGTGCCGCTCACATCGATAC +
Preference number: 4 (lower is better)
Translates to: RGGDSILLCSSGCTRTLDQYFLD*CRSHRY
Trigger: GTATCGATGTGAGCGGCACCAGTCAAGAAAATATTG...ATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR GCA 90 bp GAAAGAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCCTCGACAACTTCCCTTaGAATATTTTCTTGACTGGT +
Preference number: 4 (lower is better)
Translates to: ERGGDSILLCSSGCTRTLLDNFP*NIFLTG
Trigger: ACCAGTCAAGAAAATATTGCAAGGGAAGTTGTCGAG...GAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CCA 90 bp GAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGAAGTCCATGACTCCTTaGAATCCATACTTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: EEEIASFCVAQAVLELSMKSMTP*NPYFFS
Trigger: AGAGAAAAAGTATGGATTCCAAGGAGTCATGGACTT...CATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR GCA 90 bp TTGTTTATGGGGGAAAGAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTGATTCTTTCAAACTCTaGTCGAAAACGTTGAATGTC +
Preference number: 4 (lower is better)
Translates to: LFMGERGGDSILLCSSGCDSFKL*SKTLNV
Trigger: GACATTCAACGTTTTCGAGCAGAGTTTGAAAGAATC...ACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTCTTTCCCCCATAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CCA 90 bp TTGTTTATGGGGGAAAGAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTAACCATCCTATCACTTaGCATATAATCCTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: LFMGERGGDSILLCSSGCNHPIT*HIILFC
Trigger: GCAAAACAGGATTATATGCCAAGTGATAGGATGGTT...ACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTCTTTCCCCCATAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CCA 90 bp TGTTCAGGCTGGAAACTGGCAGGGGAAGCCAACCCTGATACAGGCTaGGCTACAATCGTTGGGGCCGAGGGTCGGCCGAGGTGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: CSGWKLAGEANPDTG*ATIVGAEGRPRCPR
Trigger: TCTGGGACACCTCGGCCGACCCTCGGCCCCAACGATTGTAGCCCAGCCTGTATCAGGGTTGGCTTCCCCTGCCAGTTTCCAGCCTGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS TCA 90 bp ATACTGGAATTGTTCAGGCTGGAAACTGGCAGGGGAAGCCAACCCTaGTACAGGCTGGGCTACAATCGTTGGGGCCGAGGGTCGGCCGAG +
Preference number: 5 (lower is better)
Translates to: ILELFRLETGRGSQP*YRLGYNRWGRGSAE
Trigger: CTCGGCCGACCCTCGGCCCCAACGATTGTAGCCCAGCCTGTATCAGGGTTGGCTTCCCCTGCCAGTTTCCAGCCTGAACAATTCCAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CAA 90 bp GGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGCTCCTGGCTTCAGAGTGCCTTaGTGGGTACCTGGGAGCACA +
Preference number: 5 (lower is better)
Translates to: GDSILLCSSGCTRTLDAPGFRVP*WVPGST
Trigger: TGTGCTCCCAGGTACCCACAAAGGCACTCTGAAGCC...AGGAGCATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS TCA 90 bp CAGTCAGAGCTGCCGAAGTGGCAGGAAATTGCTTTCCGGAAGCCTTaGGTTTTGTTCCGACCAGATCCATGGATGAGCAGAGGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: QSELPKWQEIAFRKP*VLFRPDPWMSRGWK
Trigger: CTTCCACCCTCTGCTCATCCATGGATCTGGTCGGAACAAAACTCAAGGCTTCCGGAAAGCAATTTCCTGCCACTTCGGCAGCTCTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS GCA 90 bp TCTCTGCCATCTCGACAACTTCCCTTGCAATATTTTCTTGACTGGTaGCGCTCACATCGATACACTGGCAGTCAGAGCTGCCGAAGTGGC +
Preference number: 5 (lower is better)
Translates to: SLPSRQLPLQYFLDW*RSHRYTGSQSCRSG
Trigger: GCCACTTCGGCAGCTCTGACTGCCAGTGTATCGATGTGAGCGGCACCAGTCAAGAAAATATTGCAAGGGAAGTTGTCGAGATGGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CAA 90 bp GATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGCTCCTGTCCGAAGTGGCAGGAAATaGCTTTCCGGAAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: DSILLCSSGCTRTLDAPVRSGRK*LSGSLE
Trigger: CTCAAGGCTTCCGGAAAGCAATTTCCTGCCACTTCG...GACAGGAGCATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS GCA 90 bp TGGGTACCTGGGAGCACAACCAGACAACCGTTGTTTCTGTCAATGTaGTCCATGGCTGTCCAAGCACAAACAATTAGGTTGCTAGGTCGG +
Preference number: 5 (lower is better)
Translates to: WVPGSTTRQPLFLSM*SMAVQAQTIRLLGR
Trigger: CCGACCTAGCAACCTAATTGTTTGTGCTTGGACAGCCATGGAGCACATTGACAGAAACAACGGTTGTCTGGTTGTGCTCCCAGGTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS GCA 90 bp CACATCGATACACTGGCAGTCAGAGCTGCCGAAGTGGCAGGAAATTaGTTTCCGGAAGCCTTGAGTTTTGTTCCGACCAGATCCATGGAT +
Preference number: 5 (lower is better)
Translates to: HIDTLAVRAAEVAGN*FPEALSFVPTRSMD
Trigger: ATCCATGGATCTGGTCGGAACAAAACTCAAGGCTTCCGGAAAGCAATTTCCTGCCACTTCGGCAGCTCTGACTGCCAGTGTATCGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS GCA 90 bp TTTCTTGACTGGTGCCGCTCACATCGATACACTGGCAGTCAGAGCTaGCGAAGTGGCAGGAAATTGCTTTCCGGAAGCCTTGAGTTTTGT +
Preference number: 5 (lower is better)
Translates to: FLDWCRSHRYTGSQS*RSGRKLLSGSLEFC
Trigger: ACAAAACTCAAGGCTTCCGGAAAGCAATTTCCTGCCACTTCGGCAGCTCTGACTGCCAGTGTATCGATGTGAGCGGCACCAGTCAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CCA 90 bp CCACTTGGGGTAATCATGTGGCTTCAGAGTGCCTTTGTGGGTACCTaGGAGCACAACCAGACAACCGTTGTTTCTGTCAATGTGCTCCAT +
Preference number: 5 (lower is better)
Translates to: PLGVIMWLQSAFVGT*EHNQTTVVSVNVLH
Trigger: ATGGAGCACATTGACAGAAACAACGGTTGTCTGGTTGTGCTCCCAGGTACCCACAAAGGCACTCTGAAGCCACATGATTACCCCAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CCA 90 bp ATGGTACATTTTGTTAACACCTCCCTCCCACTTGGGGTAATCATGTaGCTTCAGAGTGCCTTTGTGGGTACCTGGGAGCACAACCAGACA +
Preference number: 5 (lower is better)
Translates to: MVHFVNTSLPLGVIM*LQSAFVGTWEHNQT
Trigger: TGTCTGGTTGTGCTCCCAGGTACCCACAAAGGCACTCTGAAGCCACATGATTACCCCAAGTGGGAGGGAGGTGTTAACAAAATGTACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CAA 90 bp GATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGCTCCTGTCCAGAGTATACTGGAATaGTTCAGGCTGGAAACTGGC +
Preference number: 5 (lower is better)
Translates to: DSILLCSSGCTRTLDAPVQSILE*FRLETG
Trigger: GCCAGTTTCCAGCCTGAACAATTCCAGTATACTCTG...GACAGGAGCATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CAA 90 bp GAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGCCTTGCAATATTTTCTaGACTGGTGCCGCTCACATC +
Preference number: 5 (lower is better)
Translates to: EEEIASFCVAQAVLELSMPCNIF*TGAAHI
Trigger: GATGTGAGCGGCACCAGTCAAGAAAATATTGCAAGG...CATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CCA 90 bp GGACATTATTATCCAGAGTATACTGGAATTGTTCAGGCTGGAAACTaGCAGGGGAAGCCAACCCTGATACAGGCTGGGCTACAATCGTTG +
Preference number: 5 (lower is better)
Translates to: GHYYPEYTGIVQAGN*QGKPTLIQAGLQSL
Trigger: CAACGATTGTAGCCCAGCCTGTATCAGGGTTGGCTTCCCCTGCCAGTTTCCAGCCTGAACAATTCCAGTATACTCTGGATAATAATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CCA 90 bp TTTTCTCTGCCATCTCGACAACTTCCCTTGCAATATTTTCTTGACTaGTGCCGCTCACATCGATACACTGGCAGTCAGAGCTGCCGAAGT +
Preference number: 5 (lower is better)
Translates to: FSLPSRQLPLQYFLD*CRSHRYTGSQSCRS
Trigger: ACTTCGGCAGCTCTGACTGCCAGTGTATCGATGTGAGCGGCACCAGTCAAGAAAATATTGCAAGGGAAGTTGTCGAGATGGCAGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CAA 90 bp GGGAAAGAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCGCATATAATCCTGTTTaGCAAGGGCCACATCTCTCA +
Preference number: 5 (lower is better)
Translates to: GKEEEIASFCVAQAVLELAYNPV*QGPHLS
Trigger: TGAGAGATGTGGCCCTTGCAAAACAGGATTATATGC...GAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTCTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CAA 90 bp GAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGGTTGGGGTCATAGTCTaGGATGCCATGGTACATTTT +
Preference number: 5 (lower is better)
Translates to: EEEIASFCVAQAVLELSMVGVIV*DAMVHF
Trigger: AAAATGTACCATGGCATCCAAGACTATGACCCCAAC...CATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CAA 90 bp GAGGAGGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGCTCTGCTCGAAAACGTaGAATGTCATCATCAGATAC +
Preference number: 5 (lower is better)
Translates to: EEEIASFCVAQAVLELSMLCSKT*NVIIRY
Trigger: GTATCTGATGATGACATTCAACGTTTTCGAGCAGAG...CATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS-3UTR CAA 90 bp GGAGATAGCATCCTTCTGTGTAGCTCAGGCTGTACTCGAACTCTCGATGCTCCTGGAAATCCTGGATCTTaGAAACCATCCTATCACTTG +
Preference number: 5 (lower is better)
Translates to: GDSILLCSSGCTRTLDAPGNPGS*KPSYHL
Trigger: CAAGTGATAGGATGGTTTCAAAGATCCAGGATTTCC...AGGAGCATCGAGAGTTCGAGTACAGCCTGAGCTACACAGAAGGATGCTATCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS GCA 90 bp GATGTCTTCTTGCCAACATCTGGAGGCTTGTTGATCAGCATCCCATaGAGAGCCATAATATTGGGTCCAGTGAAACACTCCACATACTTC +
Preference number: 5 (lower is better)
Translates to: DVFLPTSGGLLISIP*RAIILGPVKHSTYF
Trigger: GAAGTATGTGGAGTGTTTCACTGGACCCAATATTATGGCTCTGCATGGGATGCTGATCAACAAGCCTCCAGATGTTGGCAAGAAGACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CCA 90 bp ATCCTGTTTTGCAAGGGCCACATCTCTCATTATAACGATCCCTGGTaGTTTCACCTCCTCTCTGCAGATTCTTTCAAACTCTGCTCGAAA +
Preference number: 5 (lower is better)
Translates to: ILFCKGHISHYNDPW*FHLLSADSFKLCSK
Trigger: TTTCGAGCAGAGTTTGAAAGAATCTGCAGAGAGGAGGTGAAACCACCAGGGATCGTTATAATGAGAGATGTGGCCCTTGCAAAACAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CAA 90 bp AACTGGCAGGGGAAGCCAACCCTGATACAGGCTGGGCTACAATCGTaGGGGCCGAGGGTCGGCCGAGGTGTCCCAGAAGGACCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: NWQGKPTLIQAGLQS*GPRVGRGVPEGPAA
Trigger: GGCTGCAGGTCCTTCTGGGACACCTCGGCCGACCCTCGGCCCCAACGATTGTAGCCCAGCCTGTATCAGGGTTGGCTTCCCCTGCCAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CAA 72 bp GGGAAGCCAACCCTGATACAGGCTGGGCTACAATCGTaGGGGCCGAGGGTCGGCCGAGGTGTCCCAGAAGGA +
Preference number: 6 (lower is better)
Translates to: GKPTLIQAGLQS*GPRVGRGVPEG
Trigger: TCCTTCTGGGACACCTCGGCCGACCCTCGGCCCCAACGATTGTAGCCCAGCCTGTATCAGGGTTGGCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS TCA 72 bp TTGTTCAGGCTGGAAACTGGCAGGGGAAGCCAACCCTaGTACAGGCTGGGCTACAATCGTTGGGGCCGAGGG +
Preference number: 6 (lower is better)
Translates to: LFRLETGRGSQP*YRLGYNRWGRG
Trigger: CCCTCGGCCCCAACGATTGTAGCCCAGCCTGTATCAGGGTTGGCTTCCCCTGCCAGTTTCCAGCCTGAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS GCA 72 bp CTCCCTCCCACTTGGGGTAATCATGTGGCTTCAGAGTaGCTTTGTGGGTACCTGGGAGCACAACCAGACAAC +
Preference number: 6 (lower is better)
Translates to: LPPTWGNHVASE*LCGYLGAQPDN
Trigger: GTTGTCTGGTTGTGCTCCCAGGTACCCACAAAGGCACTCTGAAGCCACATGATTACCCCAAGTGGGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS GCA 72 bp TGGTGCCGCTCACATCGATACACTGGCAGTCAGAGCTaGCGAAGTGGCAGGAAATTGCTTTCCGGAAGCCTT +
Preference number: 6 (lower is better)
Translates to: WCRSHRYTGSQS*RSGRKLLSGSL
Trigger: AAGGCTTCCGGAAAGCAATTTCCTGCCACTTCGGCAGCTCTGACTGCCAGTGTATCGATGTGAGCGGCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CAA 90 bp GCAGTCAGAGCTGCCGAAGTGGCAGGAAATTGCTTTCCGGAAGCCTaGAGTTTTGTTCCGACCAGATCCATGGATGAGCAGAGGGTGGAA +
Preference number: 6 (lower is better)
Translates to: AVRAAEVAGNCFPEA*SFVPTRSMDEQRVE
Trigger: TTCCACCCTCTGCTCATCCATGGATCTGGTCGGAACAAAACTCAAGGCTTCCGGAAAGCAATTTCCTGCCACTTCGGCAGCTCTGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS GCA 72 bp ACACTGGCAGTCAGAGCTGCCGAAGTGGCAGGAAATTaGTTTCCGGAAGCCTTGAGTTTTGTTCCGACCAGA +
Preference number: 6 (lower is better)
Translates to: TLAVRAAEVAGN*FPEALSFVPTR
Trigger: TCTGGTCGGAACAAAACTCAAGGCTTCCGGAAAGCAATTTCCTGCCACTTCGGCAGCTCTGACTGCCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CCA 72 bp ATGCAAGGGATGCCGGGATGTCTTCTTGCCAACATCTaGAGGCTTGTTGATCAGCATCCCATGCAGAGCCAT +
Preference number: 6 (lower is better)
Translates to: MQGMPGCLLANI*RLVDQHPMQSH
Trigger: ATGGCTCTGCATGGGATGCTGATCAACAAGCCTCCAGATGTTGGCAAGAAGACATCCCGGCATCCCTTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CAA 72 bp CCTTTGTGGGTACCTGGGAGCACAACCAGACAACCGTaGTTTCTGTCAATGTGCTCCATGGCTGTCCAAGCA +
Preference number: 6 (lower is better)
Translates to: PLWVPGSTTRQP*FLSMCSMAVQA
Trigger: TGCTTGGACAGCCATGGAGCACATTGACAGAAACAACGGTTGTCTGGTTGTGCTCCCAGGTACCCACAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CAA 72 bp TACACTGGCAGTCAGAGCTGCCGAAGTGGCAGGAAATaGCTTTCCGGAAGCCTTGAGTTTTGTTCCGACCAG +
Preference number: 6 (lower is better)
Translates to: YTGSQSCRSGRK*LSGSLEFCSDQ
Trigger: CTGGTCGGAACAAAACTCAAGGCTTCCGGAAAGCAATTTCCTGCCACTTCGGCAGCTCTGACTGCCAGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CCA 72 bp TATCCAGAGTATACTGGAATTGTTCAGGCTGGAAACTaGCAGGGGAAGCCAACCCTGATACAGGCTGGGCTA +
Preference number: 6 (lower is better)
Translates to: YPEYTGIVQAGN*QGKPTLIQAGL
Trigger: TAGCCCAGCCTGTATCAGGGTTGGCTTCCCCTGCCAGTTTCCAGCCTGAACAATTCCAGTATACTCTGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CAA 90 bp TGCAAGGGATGCCGGGATGTCTTCTTGCCAACATCTGGAGGCTTGTaGATCAGCATCCCATGCAGAGCCATAATATTGGGTCCAGTGAAA +
Preference number: 6 (lower is better)
Translates to: CKGCRDVFLPTSGGL*ISIPCRAIILGPVK
Trigger: TTTCACTGGACCCAATATTATGGCTCTGCATGGGATGCTGATCAACAAGCCTCCAGATGTTGGCAAGAAGACATCCCGGCATCCCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CAA 72 bp TGCCGGGATGTCTTCTTGCCAACATCTGGAGGCTTGTaGATCAGCATCCCATGCAGAGCCATAATATTGGGT +
Preference number: 6 (lower is better)
Translates to: CRDVFLPTSGGL*ISIPCRAIILG
Trigger: ACCCAATATTATGGCTCTGCATGGGATGCTGATCAACAAGCCTCCAGATGTTGGCAAGAAGACATCCCGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CAA 72 bp GGATGCCGGGATGTCTTCTTGCCAACATCTGGAGGCTaGTTGATCAGCATCCCATGCAGAGCCATAATATTG +
Preference number: 6 (lower is better)
Translates to: GCRDVFLPTSGG*LISIPCRAIIL
Trigger: CAATATTATGGCTCTGCATGGGATGCTGATCAACAAGCCTCCAGATGTTGGCAAGAAGACATCCCGGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CAA 90 bp TTCAGAGTGCCTTTGTGGGTACCTGGGAGCACAACCAGACAACCGTaGTTTCTGTCAATGTGCTCCATGGCTGTCCAAGCACAAACAATT +
Preference number: 6 (lower is better)
Translates to: FRVPLWVPGSTTRQP*FLSMCSMAVQAQTI
Trigger: AATTGTTTGTGCTTGGACAGCCATGGAGCACATTGACAGAAACAACGGTTGTCTGGTTGTGCTCCCAGGTACCCACAAAGGCACTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS GCA 72 bp TTGCCAACATCTGGAGGCTTGTTGATCAGCATCCCATaGAGAGCCATAATATTGGGTCCAGTGAAACACTCC +
Preference number: 6 (lower is better)
Translates to: LPTSGGLLISIP*RAIILGPVKHS
Trigger: GGAGTGTTTCACTGGACCCAATATTATGGCTCTGCATGGGATGCTGATCAACAAGCCTCCAGATGTTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS GCA 72 bp GGGAGCACAACCAGACAACCGTTGTTTCTGTCAATGTaGTCCATGGCTGTCCAAGCACAAACAATTAGGTTG +
Preference number: 6 (lower is better)
Translates to: GSTTRQPLFLSM*SMAVQAQTIRL
Trigger: CAACCTAATTGTTTGTGCTTGGACAGCCATGGAGCACATTGACAGAAACAACGGTTGTCTGGTTGTGCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CAA 90 bp ACATCTGGAGGCTTGTTGATCAGCATCCCATGCAGAGCCATAATATaGGGTCCAGTGAAACACTCCACATACTTCAGAATCTCGGGGAGA +
Preference number: 6 (lower is better)
Translates to: TSGGLLISIPCRAII*GPVKHSTYFRISGR
Trigger: TCTCCCCGAGATTCTGAAGTATGTGGAGTGTTTCACTGGACCCAATATTATGGCTCTGCATGGGATGCTGATCAACAAGCCTCCAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CAA 90 bp CTCCTTGGAATCCATACTTTTTCTCTGCCATCTCGACAACTTCCCTaGCAATATTTTCTTGACTGGTGCCGCTCACATCGATACACTGGC +
Preference number: 6 (lower is better)
Translates to: LLGIHTFSLPSRQLP*QYFLDWCRSHRYTG
Trigger: GCCAGTGTATCGATGTGAGCGGCACCAGTCAAGAAAATATTGCAAGGGAAGTTGTCGAGATGGCAGAGAAAAAGTATGGATTCCAAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS TCA 72 bp CCACATACTTCAGAATCTCGGGGAGAAGGCAGTATCTaGAGAGCTCCTCATCTTCTTGGAAATCCTGGATCT +
Preference number: 6 (lower is better)
Translates to: PHTSESRGEGSI*RAPHLLGNPGS
Trigger: AGATCCAGGATTTCCAAGAAGATGAGGAGCTCTTCAGATACTGCCTTCTCCCCGAGATTCTGAAGTATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CCA 72 bp TGCAAGGGCCACATCTCTCATTATAACGATCCCTGGTaGTTTCACCTCCTCTCTGCAGATTCTTTCAAACTC +
Preference number: 6 (lower is better)
Translates to: CKGHISHYNDPW*FHLLSADSFKL
Trigger: GAGTTTGAAAGAATCTGCAGAGAGGAGGTGAAACCACCAGGGATCGTTATAATGAGAGATGTGGCCCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CAA 72 bp ATCCATACTTTTTCTCTGCCATCTCGACAACTTCCCTaGCAATATTTTCTTGACTGGTGCCGCTCACATCGA +
Preference number: 6 (lower is better)
Translates to: IHTFSLPSRQLP*QYFLDWCRSHR
Trigger: TCGATGTGAGCGGCACCAGTCAAGAAAATATTGCAAGGGAAGTTGTCGAGATGGCAGAGAAAAAGTATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CAA 72 bp CTTGGAAATCCTGGATCTTTGAAACCATCCTATCACTaGGCATATAATCCTGTTTTGCAAGGGCCACATCTC +
Preference number: 6 (lower is better)
Translates to: LGNPGSLKPSYH*AYNPVLQGPHL
Trigger: GAGATGTGGCCCTTGCAAAACAGGATTATATGCCAAGTGATAGGATGGTTTCAAAGATCCAGGATTTCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CCA 72 bp CGAAATATCCAAGTGTCCTTAAAGTCCATGACTCCTTaGAATCCATACTTTTTCTCTGCCATCTCGACAACT +
Preference number: 6 (lower is better)
Translates to: RNIQVSLKSMTP*NPYFFSAISTT
Trigger: AGTTGTCGAGATGGCAGAGAAAAAGTATGGATTCCAAGGAGTCATGGACTTTAAGGACACTTGGATATTTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CAA 72 bp TCGAAATATCCAAGTGTCCTTAAAGTCCATGACTCCTaGGAATCCATACTTTTTCTCTGCCATCTCGACAAC +
Preference number: 6 (lower is better)
Translates to: SKYPSVLKVHDS*ESILFLCHLDN
Trigger: GTTGTCGAGATGGCAGAGAAAAAGTATGGATTCCAAGGAGTCATGGACTTTAAGGACACTTGGATATTTCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS TCA 72 bp TCTCTGCAGATTCTTTCAAACTCTGCTCGAAAACGTTaGATGTCATCATCAGATACCAGATTCTTAATGACG +
Preference number: 6 (lower is better)
Translates to: SLQILSNSARKR*MSSSDTRFLMT
Trigger: CGTCATTAAGAATCTGGTATCTGATGATGACATTCAACGTTTTCGAGCAGAGTTTGAAAGAATCTGCAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8
CDS CAA 72 bp CTCTCTGCAGATTCTTTCAAACTCTGCTCGAAAACGTaGAATGTCATCATCAGATACCAGATTCTTAATGAC +
Preference number: 6 (lower is better)
Translates to: LSADSFKLCSKT*NVIIRYQILND
Trigger: GTCATTAAGAATCTGGTATCTGATGATGACATTCAACGTTTTCGAGCAGAGTTTGAAAGAATCTGCAGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027975.8