Pregenerated sensors for PHTF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039987Ensembl transcript IDs: ENSMUST00000118174.8, ENSMUST00000124431.8, ENSMUST00000153194.2, ENSMUST00000156044.2
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAGCAGAGCCACCCACTGCTTCCAGCCAGCTCCATCAGCGCTCGTaGTCTGGCATCCCGGCTACACCTCCATTTCTCTCAACTGTCACG | + |
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Preference number: 1 (lower is better) Translates to: GAEPPTASSQLHQRS*SGIPATPPFLSTVT Trigger: CGTGACAGTTGAGAGAAATGGAGGTGTAGCCGGGATGCCAGAGCACGAGCGCTGATGGAGCTGGCTGGAAGCAGTGGGTGGCTCTGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153194.2 |
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| 3UTR GCA 90 bp | GTAAACACTTCTTTCCCAGTAGACTCCTGGAGCAGAGCCACCCACTaGTTCCAGCCAGCTCCATCAGCGCTCGTGCTCTGGCATCCCGGC | + |
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Preference number: 1 (lower is better) Translates to: VNTSFPVDSWSRATH*FQPAPSALVLWHPG Trigger: GCCGGGATGCCAGAGCACGAGCGCTGATGGAGCTGGCTGGAAGCAGTGGGTGGCTCTGCTCCAGGAGTCTACTGGGAAAGAAGTGTTTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
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| 3UTR GCA 90 bp | AAGCCAAAGGTCTCTGAAGACAGTGCCAACACTGTAAGGGGCGCCTaGGCCGTGGCTCTGCACCGCTCCCTCCTGTGTGTTATCTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: KPKVSEDSANTVRGA*AVALHRSLLCVICG Trigger: ACCACAGATAACACACAGGAGGGAGCGGTGCAGAGCCACGGCGCAGGCGCCCCTTACAGTGTTGGCACTGTCTTCAGAGACCTTTGGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR CCA 90 bp | GGCAGGAACACTCCTTGGCGTTCGTGTGGCCCAGGCTGCGTCTTCTaGTCCAACAGTTTCACACTGAGGCTCATGGTACTGTGCTCCATC | + |
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Preference number: 1 (lower is better) Translates to: GRNTPWRSCGPGCVF*SNSFTLRLMVLCSI Trigger: GATGGAGCACAGTACCATGAGCCTCAGTGTGAAACTGTTGGACCAGAAGACGCAGCCTGGGCCACACGAACGCCAAGGAGTGTTCCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR GCA 90 bp | GGTATCTTTGGCAGGAACACTCCTTGGCGTTCGTGTGGCCCAGGCTaGGTCTTCTGGTCCAACAGTTTCACACTGAGGCTCATGGTACTG | + |
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Preference number: 1 (lower is better) Translates to: GIFGRNTPWRSCGPG*VFWSNSFTLRLMVL Trigger: CAGTACCATGAGCCTCAGTGTGAAACTGTTGGACCAGAAGACGCAGCCTGGGCCACACGAACGCCAAGGAGTGTTCCTGCCAAAGATACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR TCA 90 bp | CCTTCTTTGACCCTGATAAGAAGAAAGCAGCAAGCCAAAGGTCTCTaGAGACAGTGCCAACACTGTAAGGGGCGCCTGCGCCGTGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: PSLTLIRRKQQAKGL*RQCQHCKGRLRRGS Trigger: AGAGCCACGGCGCAGGCGCCCCTTACAGTGTTGGCACTGTCTTCAGAGACCTTTGGCTTGCTGCTTTCTTCTTATCAGGGTCAAAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR CCA 90 bp | TCTTTCTTTGGGTATCTTTGGCAGGAACACTCCTTGGCGTTCGTGTaGCCCAGGCTGCGTCTTCTGGTCCAACAGTTTCACACTGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: SFFGYLWQEHSLAFV*PRLRLLVQQFHTEA Trigger: AGCCTCAGTGTGAAACTGTTGGACCAGAAGACGCAGCCTGGGCCACACGAACGCCAAGGAGTGTTCCTGCCAAAGATACCCAAAGAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR TCA 90 bp | AACACAATGCTGTCTGCCGTTTCCTATACAGAGAGCACTCTCCAGTaGGGCTTAGCTGAGGTTGCTCAGAGGAATGGGAAGGGCAACATT | + |
|
Preference number: 1 (lower is better) Translates to: NTMLSAVSYTESTLQ*GLAEVAQRNGKGNI Trigger: AATGTTGCCCTTCCCATTCCTCTGAGCAACCTCAGCTAAGCCTCACTGGAGAGTGCTCTCTGTATAGGAAACGGCAGACAGCATTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
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| 3UTR TCA 90 bp | TGTGGCTTTCTATTTCGAAGACCGCTTTCAGAAGTTCTGTCCACATaGCCACGCAATGGGTATCCTGTTTCGGGACCCTCCTCACTGGAT | + |
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Preference number: 1 (lower is better) Translates to: CGFLFRRPLSEVLST*PRNGYPVSGPSSLD Trigger: ATCCAGTGAGGAGGGTCCCGAAACAGGATACCCATTGCGTGGTCATGTGGACAGAACTTCTGAAAGCGGTCTTCGAAATAGAAAGCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR CCA 90 bp | GACATTTGTTATCTTTCTTTGGGTATCTTTGGCAGGAACACTCCTTaGCGTTCGTGTGGCCCAGGCTGCGTCTTCTGGTCCAACAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: DICYLSLGIFGRNTP*RSCGPGCVFWSNSF Trigger: GAAACTGTTGGACCAGAAGACGCAGCCTGGGCCACACGAACGCCAAGGAGTGTTCCTGCCAAAGATACCCAAAGAAAGATAACAAATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR GCA 90 bp | CAACAGTTTCACACTGAGGCTCATGGTACTGTGCTCCATCCTCACTaGTTTTTACAGTCCTCTTCCCATCGAGGGACACATAGCCATTGT | + |
|
Preference number: 1 (lower is better) Translates to: QQFHTEAHGTVLHPH*FLQSSSHRGTHSHC Trigger: ACAATGGCTATGTGTCCCTCGATGGGAAGAGGACTGTAAAAAGCAGTGAGGATGGAGCACAGTACCATGAGCCTCAGTGTGAAACTGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR CCA 90 bp | ATTTCGAAGACCGCTTTCAGAAGTTCTGTCCACATGACCACGCAATaGGTATCCTGTTTCGGGACCCTCCTCACTGGATACTTCATCAGA | + |
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Preference number: 1 (lower is better) Translates to: ISKTAFRSSVHMTTQ*VSCFGTLLTGYFIR Trigger: TCTGATGAAGTATCCAGTGAGGAGGGTCCCGAAACAGGATACCCATTGCGTGGTCATGTGGACAGAACTTCTGAAAGCGGTCTTCGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR TCA 90 bp | CAGTCTAGATCCCAGTACTGTTCTGAAGTATTTCAAGAGCGATCCTaGGCGGACCCTGGTTTACCAGAGGACATGTGTTTAGCTGAGACA | + |
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Preference number: 1 (lower is better) Translates to: QSRSQYCSEVFQERS*ADPGLPEDMCLAET Trigger: TGTCTCAGCTAAACACATGTCCTCTGGTAAACCAGGGTCCGCTCAGGATCGCTCTTGAAATACTTCAGAACAGTACTGGGATCTAGACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
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| 3UTR TCA 90 bp | AAGGCAGGGATGTCACTTACTACTCTGAAATGGCTCTGTGAACTATaGAGCTGCTTAGCACATTTTCCTCCTAGAACTCTACTGCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: KAGMSLTTLKWLCEL*SCLAHFPPRTLLLP Trigger: GGGCAGCAGTAGAGTTCTAGGAGGAAAATGTGCTAAGCAGCTTCATAGTTCACAGAGCCATTTCAGAGTAGTAAGTGACATCCCTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
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| 3UTR GCA 90 bp | AACAATCCCTTTCCTTGTCAGAGAAGTCCAAGGACTTTCAGGCTTTaGCTTAGCAAATGCAGACCCTCTCACAAGATCAACATCGATGAG | + |
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Preference number: 1 (lower is better) Translates to: NNPFPCQRSPRTFRL*LSKCRPSHKINIDE Trigger: CTCATCGATGTTGATCTTGTGAGAGGGTCTGCATTTGCTAAGGCAAAGCCTGAAAGTCCTTGGACTTCTCTGACAAGGAAAGGGATTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156044.2 |
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| 3UTR CCA 90 bp | CCACATGACCACGCAATGGGTATCCTGTTTCGGGACCCTCCTCACTaGATACTTCATCAGAGACATTTGTTATCTTTCTTTGGGTATCTT | + |
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Preference number: 1 (lower is better) Translates to: PHDHAMGILFRDPPH*ILHQRHLLSFFGYL Trigger: AAGATACCCAAAGAAAGATAACAAATGTCTCTGATGAAGTATCCAGTGAGGAGGGTCCCGAAACAGGATACCCATTGCGTGGTCATGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR GCA 90 bp | CACTTGTTGACCTGTTATACAACACCATCTATTAATACTGAAGGGTaGTTCAACTGCAGCTTAGTCAGTCTAGATCCCAGTACTGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: HLLTCYTTPSINTEG*FNCSLVSLDPSTVL Trigger: CAGAACAGTACTGGGATCTAGACTGACTAAGCTGCAGTTGAAGCACCCTTCAGTATTAATAGATGGTGTTGTATAACAGGTCAACAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
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| 3UTR CCA 90 bp | AGGTTGCTCAGAGGAATGGGAAGGGCAACATTTAACACATGGCTCTaGTCTCTACACATCCTGATTTTAAGAGTGATTTGCGAATTAGAA | + |
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Preference number: 1 (lower is better) Translates to: RLLRGMGRATFNTWL*SLHILILRVICELE Trigger: TTCTAATTCGCAAATCACTCTTAAAATCAGGATGTGTAGAGACCAGAGCCATGTGTTAAATGTTGCCCTTCCCATTCCTCTGAGCAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
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| 3UTR GCA 90 bp | ACCTGTTATACAACACCATCTATTAATACTGAAGGGTGCTTCAACTaGAGCTTAGTCAGTCTAGATCCCAGTACTGTTCTGAAGTATTTC | + |
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Preference number: 1 (lower is better) Translates to: TCYTTPSINTEGCFN*SLVSLDPSTVLKYF Trigger: GAAATACTTCAGAACAGTACTGGGATCTAGACTGACTAAGCTGCAGTTGAAGCACCCTTCAGTATTAATAGATGGTGTTGTATAACAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
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| 3UTR GCA 90 bp | AATTACGTCAACAATTACCAGGATCTCAGGTATCTGGATCCGCTCTaGCACCCTTTCAACAATGAAAAACTTCAATGCTTAAAACAAACT | + |
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Preference number: 1 (lower is better) Translates to: NYVNNYQDLRYLDPL*HPFNNEKLQCLKQT Trigger: AGTTTGTTTTAAGCATTGAAGTTTTTCATTGTTGAAAGGGTGGCAGAGCGGATCCAGATACCTGAGATCCTGGTAATTGTTGACGTAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGTTATCTTTCTTTGGGTATCTTTGGCAGGAACACTCCTTGGCGTTCGTGTGCCTGCGCCGTGGCTCTaGACCGCTCCCTCCTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: FVIFLWVSLAGTLLGVRVPAPWL*TAPSCV Trigger: CACACAGGAGGGAGCGGTGCAGAGCCACGGCGCAGG...CACACGAACGCCAAGGAGTGTTCCTGCCAAAGATACCCAAAGAAAGATAACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTGCACCAGATTAAATCTGGAAGCTAGAACTGGTAGGCTGGAGCTGTCCTTCTTCCCAGTAGACTCCTaGAGCAGAGCCACCCACTGC | + |
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Preference number: 2 (lower is better) Translates to: GCTRLNLEARTGRLELSFFPVDS*SRATHC Trigger: GCAGTGGGTGGCTCTGCTCCAGGAGTCTACTGGGAA...GAAGGACAGCTCCAGCCTACCAGTTCTAGCTTCCAGATTTAATCTGGTGCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
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| 3UTR-3UTR GCA 90 bp | TATCTGCCCTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACAGAGCCAGGGGAGGGGTaGACCAGATTAAATCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: YLPYLPKGNMISSHRTRTEPGEG*TRLNLE Trigger: TTCCAGATTTAATCTGGTGCACCCCTCCCCTGGCTC...TGTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAGGGCAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTATCTGGATCCGCTCTGCCACCCTTTCAACAATGAAAAACTTCAATGCTTTCCCAGTAGACTCCTaGAGCAGAGCCACCCACTGC | + |
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Preference number: 2 (lower is better) Translates to: SGIWIRSATLSTMKNFNAFPVDS*SRATHC Trigger: GCAGTGGGTGGCTCTGCTCCAGGAGTCTACTGGGAA...AGCATTGAAGTTTTTCATTGTTGAAAGGGTGGCAGAGCGGATCCAGATACCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
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| 3UTR CAA 90 bp | CTGGATACTTCATCAGAGACATTTGTTATCTTTCTTTGGGTATCTTaGGCAGGAACACTCCTTGGCGTTCGTGTGGCCCAGGCTGCGTCT | + |
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Preference number: 2 (lower is better) Translates to: LDTSSETFVIFLWVS*AGTLLGVRVAQAAS Trigger: AGACGCAGCCTGGGCCACACGAACGCCAAGGAGTGTTCCTGCCAAAGATACCCAAAGAAAGATAACAAATGTCTCTGATGAAGTATCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTGCACCAGATTAAATCTGGAAGCTAGAACTGGTAGGCTGGAGCTGTCCTTCGAAGGGTGCTTCAACTaGAGCTTAGTCAGTCTAGAT | + |
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Preference number: 2 (lower is better) Translates to: GCTRLNLEARTGRLELSFEGCFN*SLVSLD Trigger: ATCTAGACTGACTAAGCTGCAGTTGAAGCACCCTTC...GAAGGACAGCTCCAGCCTACCAGTTCTAGCTTCCAGATTTAATCTGGTGCACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
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| 3UTR CAA 90 bp | ACCCTCCTCACTGGATACTTCATCAGAGACATTTGTTATCTTTCTTaGGGTATCTTTGGCAGGAACACTCCTTGGCGTTCGTGTGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: TLLTGYFIRDICYLS*GIFGRNTPWRSCGP Trigger: TGGGCCACACGAACGCCAAGGAGTGTTCCTGCCAAAGATACCCAAAGAAAGATAACAAATGTCTCTGATGAAGTATCCAGTGAGGAGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR-3UTR GCA 90 bp | ATATCTGCCCTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACGCACAGTTGGAGCTGTaGAAACAGCTCAGTGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: ISALFAKGKHDKLPPDTDAQLEL*KQLSVL Trigger: TAAAACACTGAGCTGTTTGCACAGCTCCAACTGTGC...GTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAGGGCAGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTGTTATCTTTCTTTGGGTATCTTTGGCAGGAACACTCCTTGGCGTTCGTGCCAGGCTGCGTCTTCTaGTCCAACAGTTTCACACTG | + |
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Preference number: 2 (lower is better) Translates to: HLLSFFGYLWQEHSLAFVPGCVF*SNSFTL Trigger: CAGTGTGAAACTGTTGGACCAGAAGACGCAGCCTGG...CACGAACGCCAAGGAGTGTTCCTGCCAAAGATACCCAAAGAAAGATAACAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR CAA 90 bp | ATCCTGTTTCGGGACCCTCCTCACTGGATACTTCATCAGAGACATTaGTTATCTTTCTTTGGGTATCTTTGGCAGGAACACTCCTTGGCG | + |
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Preference number: 2 (lower is better) Translates to: ILFRDPPHWILHQRH*LSFFGYLWQEHSLA Trigger: CGCCAAGGAGTGTTCCTGCCAAAGATACCCAAAGAAAGATAACAAATGTCTCTGATGAAGTATCCAGTGAGGAGGGTCCCGAAACAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGCACACAGCATTTGCCATAATTCTACCTCTGGGTTGCTTTTTCTCTATGATGAGAGCACTCTCCAGTaGGGCTTAGCTGAGGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: TAHSICHNSTSGLLFLYDESTLQ*GLAEVA Trigger: AGCAACCTCAGCTAAGCCTCACTGGAGAGTGCTCTC...ATCATAGAGAAAAAGCAACCCAGAGGTAGAATTATGGCAAATGCTGTGTGCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGTTATCTTTCTTTGGGTATCTTTGGCAGGAACACTCCTTGGCGTTCGTGTGCCAACAGTTTCACACTaGGGCTCATGGTACTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: FVIFLWVSLAGTLLGVRVPTVSH*GSWYCA Trigger: AGCACAGTACCATGAGCCTCAGTGTGAAACTGTTGG...CACACGAACGCCAAGGAGTGTTCCTGCCAAAGATACCCAAAGAAAGATAACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR-3UTR GCA 90 bp | TATCTGCCCTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACAAGGGACTATCATATCTaGCCTATTTGCCAAAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: YLPYLPKGNMISSHRTRTRDYHI*PICQRE Trigger: TTCCCTTTGGCAAATAGGGCAGATATGATAGTCCCT...TGTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAGGGCAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGACGTTACTTGTAACCACCAGCGGGAGAAGAAAGGGAAAAAGACAACTCCTTTGCCTTAGCAAATaGAGACCCTCTCACAAGATC | + |
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Preference number: 2 (lower is better) Translates to: LWTLLVTTSGRRKGKRQLLCLSK*RPSHKI Trigger: GATCTTGTGAGAGGGTCTGCATTTGCTAAGGCAAAG...GAGTTGTCTTTTTCCCTTTCTTCTCCCGCTGGTGGTTACAAGTAACGTCCAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156044.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTGCACCAGATTAAATCTGGAAGCTAGAACTGGTAGGCTGGAGCTGTCCTTCTTGCACAATACATTCTaGTGTAAACACTTCTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: GCTRLNLEARTGRLELSFLHNTF*CKHFFP Trigger: GGGAAAGAAGTGTTTACATCAGAATGTATTGTGCAA...GAAGGACAGCTCCAGCCTACCAGTTCTAGCTTCCAGATTTAATCTGGTGCACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
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| 3UTR-3UTR TCA 90 bp | TATCTGCCCTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACATCAAAGAGCACTTGTTaGCCTGTTATACAACACCAT | + |
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Preference number: 2 (lower is better) Translates to: YLPYLPKGNMISSHRTRTSKSTC*PVIQHH Trigger: ATGGTGTTGTATAACAGGTCAACAAGTGCTCTTTGA...TGTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAGGGCAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
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| 3UTR-3UTR GCA 90 bp | TATCTGCCCTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACATCAGGGCCTCATGAATaGTACACAATCATTTTACCA | + |
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Preference number: 2 (lower is better) Translates to: YLPYLPKGNMISSHRTRTSGPHE*YTIILP Trigger: TGGTAAAATGATTGTGTAGCATTCATGAGGCCCTGA...TGTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAGGGCAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153194.2 |
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| 3UTR-3UTR CCA 90 bp | AATGCTTTTTATAATGGTGTGGCTTTCTATTTCGAAGACCGCTTTCAGAAGTTCCCGTCCCCTTCCCTGTaGACTTCCAAATGGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: NAFYNGVAFYFEDRFQKFPSPSL*TSKWAA Trigger: AGCAGCCCATTTGGAAGTCCACAGGGAAGGGGACGG...GAACTTCTGAAAGCGGTCTTCGAAATAGAAAGCCACACCATTATAAAAAGCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTTCTGTCCACATGACCACGCAATGGGTATCCTGTTTCGGGACCCTCCTCACTTTGTTATCTTTCTTTaGGTATCTTTGGCAGGAACA | + |
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Preference number: 2 (lower is better) Translates to: KFCPHDHAMGILFRDPPHFVIFL*VSLAGT Trigger: TGTTCCTGCCAAAGATACCCAAAGAAAGATAACAAA...GTGAGGAGGGTCCCGAAACAGGATACCCATTGCGTGGTCATGTGGACAGAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR CAA 90 bp | CAGTCCTCTTCCCATCGAGGGACACATAGCCATTGTCAGTCTCGGTaGACTTATCAATTGAATTCTTTGCCTTCTTTGACCCTGATAAGA | + |
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Preference number: 2 (lower is better) Translates to: QSSSHRGTHSHCQSR*TYQLNSLPSLTLIR Trigger: TCTTATCAGGGTCAAAGAAGGCAAAGAATTCAATTGATAAGTCAACCGAGACTGACAATGGCTATGTGTCCCTCGATGGGAAGAGGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR CAA 90 bp | CATCGAGGGACACATAGCCATTGTCAGTCTCGGTTGACTTATCAATaGAATTCTTTGCCTTCTTTGACCCTGATAAGAAGAAAGCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: HRGTHSHCQSRLTYQ*NSLPSLTLIRRKQQ Trigger: TTGCTGCTTTCTTCTTATCAGGGTCAAAGAAGGCAAAGAATTCAATTGATAAGTCAACCGAGACTGACAATGGCTATGTGTCCCTCGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAACTGCAGCTTAGTCAGTCTAGATCCCAGTACTGTTCTGAAGTATTTCAAGGAAGGGTGCTTCAACTaGAGCTTAGTCAGTCTAGAT | + |
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Preference number: 2 (lower is better) Translates to: FNCSLVSLDPSTVLKYFKEGCFN*SLVSLD Trigger: ATCTAGACTGACTAAGCTGCAGTTGAAGCACCCTTC...CTTGAAATACTTCAGAACAGTACTGGGATCTAGACTGACTAAGCTGCAGTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
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| 3UTR-3UTR GCA 90 bp | GGACTTTCAGGCTTTGCCTTAGCAAATGCAGACCCTCTCACAAGATCAACATCGGTCTGGTTTCACATGTaGTGTTTTCTTTGGTTTATT | + |
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Preference number: 2 (lower is better) Translates to: GLSGFALANADPLTRSTSVWFHM*CFLWFI Trigger: AATAAACCAAAGAAAACAGCACATGTGAAACCAGAC...CGATGTTGATCTTGTGAGAGGGTCTGCATTTGCTAAGGCAAAGCCTGAAAGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156044.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGCACACAGCATTTGCCATAATTCTACCTCTGGGTTGCTTTTTCTCTATGATATCCCAGTACTGTTCTaGAGTATTTCAAGAGCGATC | + |
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Preference number: 2 (lower is better) Translates to: TAHSICHNSTSGLLFLYDIPVLF*SISRAI Trigger: GATCGCTCTTGAAATACTTCAGAACAGTACTGGGAT...ATCATAGAGAAAAAGCAACCCAGAGGTAGAATTATGGCAAATGCTGTGTGCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
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| 3UTR-3UTR GCA 90 bp | ACTATCATATCTGCCCTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACTCTGTTTTCACAATCTaGTTGTCAATTACGTCAACA | + |
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Preference number: 2 (lower is better) Translates to: TIISALFAKGKHDKLPPDSVFTI*LSITST Trigger: TGTTGACGTAATTGACAAGCAGATTGTGAAAACAGA...GTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAGGGCAGATATGATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
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| 3UTR-3UTR TCA 90 bp | AACTTAGAATCAAGGCCCGATGTAGGGACTATCATATCTGCCCTATTTGCCAAATTGCACAATACATTCTaGTGTAAACACTTCTTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: NLESRPDVGTIISALFAKLHNTF*CKHFFP Trigger: GGGAAAGAAGTGTTTACATCAGAATGTATTGTGCAA...TTTGGCAAATAGGGCAGATATGATAGTCCCTACATCGGGCCTTGATTCTAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| 3UTR-3UTR CCA 90 bp | AGACAACGCACTATTTCAGAGTTAAAGACGTATTCCTCAAGTAAGGCAAGTTCATCTCTTTTACAATGTTaGGGACTAAACTCAGGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: RQRTISELKTYSSSKASSSLLQC*GLNSGP Trigger: AGGCCCTGAGTTTAGTCCCCAACATTGTAAAAGAGA...TGAACTTGCCTTACTTGAGGAATACGTCTTTAACTCTGAAATAGTGCGTTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153194.2 |
||
| 3UTR-3UTR CCA 90 bp | TATTTAAGTGTGGTAGGAACAGCATACGCTATAGTGTACCATGGGAAATTCTTTGAAAGGATGACAACCTaGGTGATGTTATACAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: YLSVVGTAYAIVYHGKFFERMTT*VMLYSS Trigger: GCTGCTGTATAACATCACCCAGGTTGTCATCCTTTC...AAAGAATTTCCCATGGTACACTATAGCGTATGCTGTTCCTACCACACTTAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153194.2 |
||
| 3UTR-3UTR GCA 90 bp | AACTTAGAATCAAGGCCCGATGTAGGGACTATCATATCTGCCCTATTTGCCAAATTAATGAAGAAACAGTaGTTAGCAATGGCTTCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: NLESRPDVGTIISALFAKLMKKQ*LAMASV Trigger: AACAGAAGCCATTGCTAAGCACTGTTTCTTCATTAA...TTTGGCAAATAGGGCAGATATGATAGTCCCTACATCGGGCCTTGATTCTAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| 3UTR-3UTR CCA 90 bp | AACTTAGAATCAAGGCCCGATGTAGGGACTATCATATCTGCCCTATTTGCCAAACGCTATAGTGTACCATaGGAAATTCTTTTGAGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: NLESRPDVGTIISALFAKRYSVP*EILLSK Trigger: TTTACTCAAAAGAATTTCCCATGGTACACTATAGCG...TTTGGCAAATAGGGCAGATATGATAGTCCCTACATCGGGCCTTGATTCTAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| 3UTR CAA 90 bp | GGCAAAGAAACAGCACACAGCATTTGCCATAATTCTACCTCTGGGTaGCTTTTTCTCTATGATGTGATATGTTACAACTTCTACTTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: GKETAHSICHNSTSG*LFLYDVICYNFYFL Trigger: TAAGAAGTAGAAGTTGTAACATATCACATCATAGAGAAAAAGCAACCCAGAGGTAGAATTATGGCAAATGCTGTGTGCTGTTTCTTTGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| 3UTR CAA 90 bp | TGTGGTAGGAACAGCATACGCTATAGTGTACCATGGGAAATTCTTTaGAGTAAACGTAACGCACTTTATTTAGTAATAACAATAGGCACT | + |
|
Preference number: 2 (lower is better) Translates to: CGRNSIRYSVPWEIL*SKRNALYLVITIGT Trigger: AGTGCCTATTGTTATTACTAAATAAAGTGCGTTACGTTTACTCAAAAGAATTTCCCATGGTACACTATAGCGTATGCTGTTCCTACCACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| 3UTR GCA 72 bp | GTCTCTGAAGACAGTGCCAACACTGTAAGGGGCGCCTaGGCCGTGGCTCTGCACCGCTCCCTCCTGTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VSEDSANTVRGA*AVALHRSLLCV Trigger: AACACACAGGAGGGAGCGGTGCAGAGCCACGGCGCAGGCGCCCCTTACAGTGTTGGCACTGTCTTCAGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
||
| 3UTR GCA 72 bp | GGCAGGAACACTCCTTGGCGTTCGTGTGGCCCAGGCTaGGTCTTCTGGTCCAACAGTTTCACACTGAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GRNTPWRSCGPG*VFWSNSFTLRL Trigger: GAGCCTCAGTGTGAAACTGTTGGACCAGAAGACGCAGCCTGGGCCACACGAACGCCAAGGAGTGTTCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
||
| 3UTR CCA 72 bp | ACTCCTTGGCGTTCGTGTGGCCCAGGCTGCGTCTTCTaGTCCAACAGTTTCACACTGAGGCTCATGGTACTG | + |
|
Preference number: 3 (lower is better) Translates to: TPWRSCGPGCVF*SNSFTLRLMVL Trigger: CAGTACCATGAGCCTCAGTGTGAAACTGTTGGACCAGAAGACGCAGCCTGGGCCACACGAACGCCAAGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
||
| 3UTR TCA 72 bp | ACCCTGATAAGAAGAAAGCAGCAAGCCAAAGGTCTCTaGAGACAGTGCCAACACTGTAAGGGGCGCCTGCGC | + |
|
Preference number: 3 (lower is better) Translates to: TLIRRKQQAKGL*RQCQHCKGRLR Trigger: GCGCAGGCGCCCCTTACAGTGTTGGCACTGTCTTCAGAGACCTTTGGCTTGCTGCTTTCTTCTTATCAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
||
| 3UTR CCA 72 bp | TATCTTTCTTTGGGTATCTTTGGCAGGAACACTCCTTaGCGTTCGTGTGGCCCAGGCTGCGTCTTCTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: YLSLGIFGRNTP*RSCGPGCVFWS Trigger: GGACCAGAAGACGCAGCCTGGGCCACACGAACGCCAAGGAGTGTTCCTGCCAAAGATACCCAAAGAAAGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
||
| 3UTR CCA 72 bp | CATTCTGATGTAAACACTTCTTTCCCAGTAGACTCCTaGAGCAGAGCCACCCACTGCTTCCAGCCAGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HSDVNTSFPVDS*SRATHCFQPAP Trigger: TGGAGCTGGCTGGAAGCAGTGGGTGGCTCTGCTCCAGGAGTCTACTGGGAAAGAAGTGTTTACATCAGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| 3UTR CCA 72 bp | ACCGCTTTCAGAAGTTCTGTCCACATGACCACGCAATaGGTATCCTGTTTCGGGACCCTCCTCACTGGATAC | + |
|
Preference number: 3 (lower is better) Translates to: TAFRSSVHMTTQ*VSCFGTLLTGY Trigger: GTATCCAGTGAGGAGGGTCCCGAAACAGGATACCCATTGCGTGGTCATGTGGACAGAACTTCTGAAAGCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
||
| 3UTR TCA 72 bp | CTATTTCGAAGACCGCTTTCAGAAGTTCTGTCCACATaGCCACGCAATGGGTATCCTGTTTCGGGACCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LFRRPLSEVLST*PRNGYPVSGPS Trigger: GGAGGGTCCCGAAACAGGATACCCATTGCGTGGTCATGTGGACAGAACTTCTGAAAGCGGTCTTCGAAATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
||
| 3UTR TCA 72 bp | TCCCAGTACTGTTCTGAAGTATTTCAAGAGCGATCCTaGGCGGACCCTGGTTTACCAGAGGACATGTGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SQYCSEVFQERS*ADPGLPEDMCL Trigger: TAAACACATGTCCTCTGGTAAACCAGGGTCCGCTCAGGATCGCTCTTGAAATACTTCAGAACAGTACTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| 3UTR-3UTR CAA 90 bp | TATCTGCCCTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACACTCAACTGTCACGATTaGATCTTCCACAGCTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: YLPYLPKGNMISSHRTRTLNCHD*IFHSFK Trigger: TTTAAAGCTGTGGAAGATCAAATCGTGACAGTTGAG...TGTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAGGGCAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153194.2 |
||
| 3UTR GCA 72 bp | TTTCCTTGTCAGAGAAGTCCAAGGACTTTCAGGCTTTaGCTTAGCAAATGCAGACCCTCTCACAAGATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: FPCQRSPRTFRL*LSKCRPSHKIN Trigger: GTTGATCTTGTGAGAGGGTCTGCATTTGCTAAGGCAAAGCCTGAAAGTCCTTGGACTTCTCTGACAAGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156044.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCACACAGCATTTGCCATAATTCTACCTCTGGGTTGCTTTTTCTCTATGATTTTGAGCATGCACAGTaGGAGCTGTGCAAACAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: TAHSICHNSTSGLLFLYDFEHAQ*ELCKQL Trigger: GAGCTGTTTGCACAGCTCCAACTGTGCATGCTCAAA...ATCATAGAGAAAAAGCAACCCAGAGGTAGAATTATGGCAAATGCTGTGTGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| 3UTR CCA 72 bp | CACGCAATGGGTATCCTGTTTCGGGACCCTCCTCACTaGATACTTCATCAGAGACATTTGTTATCTTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HAMGILFRDPPH*ILHQRHLLSFF Trigger: AAAGAAAGATAACAAATGTCTCTGATGAAGTATCCAGTGAGGAGGGTCCCGAAACAGGATACCCATTGCGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
||
| 3UTR GCA 72 bp | ACAACACCATCTATTAATACTGAAGGGTGCTTCAACTaGAGCTTAGTCAGTCTAGATCCCAGTACTGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TTPSINTEGCFN*SLVSLDPSTVL Trigger: CAGAACAGTACTGGGATCTAGACTGACTAAGCTGCAGTTGAAGCACCCTTCAGTATTAATAGATGGTGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| 3UTR GCA 72 bp | AACAATTACCAGGATCTCAGGTATCTGGATCCGCTCTaGCACCCTTTCAACAATGAAAAACTTCAATGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: NNYQDLRYLDPL*HPFNNEKLQCL Trigger: TAAGCATTGAAGTTTTTCATTGTTGAAAGGGTGGCAGAGCGGATCCAGATACCTGAGATCCTGGTAATTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTTAGAATCAAGGCCCGATGTAGGGACTATCATATCTGCCCTATTTGCCAAAATCAAAGAGCACTTGTaGACCTGTTATACAACACCA | + |
|
Preference number: 3 (lower is better) Translates to: NLESRPDVGTIISALFAKIKEHL*TCYTTP Trigger: TGGTGTTGTATAACAGGTCAACAAGTGCTCTTTGAT...TTTGGCAAATAGGGCAGATATGATAGTCCCTACATCGGGCCTTGATTCTAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTTGTTATCTTTCTTTGGGTATCTTTGGCAGGAACACTCCTTGGCGTTCGTGCATTGTCAGTCTCGGTaGACTTATCAATTGAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: HLLSFFGYLWQEHSLAFVHCQSR*TYQLNS Trigger: AGAATTCAATTGATAAGTCAACCGAGACTGACAATG...CACGAACGCCAAGGAGTGTTCCTGCCAAAGATACCCAAAGAAAGATAACAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGCTTTTTATAATGGTGTGGCTTTCTATTTCGAAGACCGCTTTCAGAAGTTCTTTCTTTGGGTATCTTaGGCAGGAACACTCCTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: NAFYNGVAFYFEDRFQKFFLWVS*AGTLLG Trigger: GCCAAGGAGTGTTCCTGCCAAAGATACCCAAAGAAA...GAACTTCTGAAAGCGGTCTTCGAAATAGAAAGCCACACCATTATAAAAAGCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAACTGCAGCTTAGTCAGTCTAGATCCCAGTACTGTTCTGAAGTATTTCAAGATCAAAGAGCACTTGTaGACCTGTTATACAACACCA | + |
|
Preference number: 3 (lower is better) Translates to: FNCSLVSLDPSTVLKYFKIKEHL*TCYTTP Trigger: TGGTGTTGTATAACAGGTCAACAAGTGCTCTTTGAT...CTTGAAATACTTCAGAACAGTACTGGGATCTAGACTGACTAAGCTGCAGTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| 3UTR TCA 72 bp | ATGTCACTTACTACTCTGAAATGGCTCTGTGAACTATaGAGCTGCTTAGCACATTTTCCTCCTAGAACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: MSLTTLKWLCEL*SCLAHFPPRTL Trigger: TAGAGTTCTAGGAGGAAAATGTGCTAAGCAGCTTCATAGTTCACAGAGCCATTTCAGAGTAGTAAGTGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| 3UTR GCA 72 bp | TTACAATGTTGGGGACTAAACTCAGGGCCTCATGAATaGTACACAATCATTTTACCAATGAGTTATATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LQCWGLNSGPHE*YTIILPMSYIP Trigger: GGGGATATAACTCATTGGTAAAATGATTGTGTAGCATTCATGAGGCCCTGAGTTTAGTCCCCAACATTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153194.2 |
||
| 3UTR GCA 72 bp | TTAAAAACACACGGCAAAGAAACAGCACACAGCATTTaGCATAATTCTACCTCTGGGTTGCTTTTTCTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: LKTHGKETAHSI*HNSTSGLLFLY Trigger: ATAGAGAAAAAGCAACCCAGAGGTAGAATTATGGCAAATGCTGTGTGCTGTTTCTTTGCCGTGTGTTTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCAGAGCCACCCACTGCTTCCAGCCAGCTCCATCAGCGCTCGTGCTCTGAAAGGATGACAACCTaGGTGATGTTATACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGAEPPTASSQLHQRSCSERMTT*VMLYSS Trigger: GCTGCTGTATAACATCACCCAGGTTGTCATCCTTTC...AGAGCACGAGCGCTGATGGAGCTGGCTGGAAGCAGTGGGTGGCTCTGCTCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR GCA 90 bp | AACTTAGAATCAAGGCCCGATGTAGGGACTATCATATCTGCCCTATTTGCCAAACCTGCGCCGTGGCTCTaGACCGCTCCCTCCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NLESRPDVGTIISALFAKPAPWL*TAPSCV Trigger: CACACAGGAGGGAGCGGTGCAGAGCCACGGCGCAGG...TTTGGCAAATAGGGCAGATATGATAGTCCCTACATCGGGCCTTGATTCTAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| 3UTR CAA 72 bp | TTATCTTTCTTTGGGTATCTTTGGCAGGAACACTCCTaGGCGTTCGTGTGGCCCAGGCTGCGTCTTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSFFGYLWQEHS*AFVWPRLRLLV Trigger: GACCAGAAGACGCAGCCTGGGCCACACGAACGCCAAGGAGTGTTCCTGCCAAAGATACCCAAAGAAAGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
||
| CDS-3UTR TCA 90 bp | CTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACAAGTTACTGACGCAGAATGGGCTGTaGGCTGCTCCAAGTCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LFAKGKHDKLPPDTDKLLTQNGL*AAPSLL Trigger: CAACAGACTTGGAGCAGCTCACAGCCCATTCTGCGT...CAGTAACTTGTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CCA 90 bp | ATATCTGCCCTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACCACATGACCACGCAATaGGTATCCTGTTTCGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: ISALFAKGKHDKLPPDTDHMTTQ*VSCFGT Trigger: GGTCCCGAAACAGGATACCCATTGCGTGGTCATGTG...GTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAGGGCAGATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR TCA 90 bp | TATCTGCCCTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACACCAACAGTTTCACACTaGGGCTCATGGTACTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YLPYLPKGNMISSHRTRTPTVSH*GSWYCA Trigger: AGCACAGTACCATGAGCCTCAGTGTGAAACTGTTGG...TGTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAGGGCAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR GCA 90 bp | CTAGATCCCAGTACTGTTCTGAAGTATTTCAAGAGCGATCCTGAGCGGACCCTGGAATGGGCTGTGAGCTaGTCCAAGTCTGTTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LDPSTVLKYFKSDPERTLEWAVS*SKSVAC Trigger: ACAAGCAACAGACTTGGAGCAGCTCACAGCCCATTC...CAGGGTCCGCTCAGGATCGCTCTTGAAATACTTCAGAACAGTACTGGGATCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR TCA 90 bp | CTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACAAGTTACTGATCCTGTCTGGAACTTaGACAGCGAGAGCTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LFAKGKHDKLPPDTDKLLILSGT*TARAAT Trigger: AGTTGCAGCTCTCGCTGTTCAAGTTCCAGACAGGAT...CAGTAACTTGTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR GCA 90 bp | CTAGATCCCAGTACTGTTCTGAAGTATTTCAAGAGCGATCCTGAGCGGACCCTGAGGACTTTCAGGCTTTaGCTTAGCAAATGCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: LDPSTVLKYFKSDPERTLRTFRL*LSKCRP Trigger: GGGTCTGCATTTGCTAAGGCAAAGCCTGAAAGTCCT...CAGGGTCCGCTCAGGATCGCTCTTGAAATACTTCAGAACAGTACTGGGATCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR TCA 90 bp | AACTTAGAATCAAGGCCCGATGTAGGGACTATCATATCTGCCCTATTTGCCAAACTCACTGGTACAAGATaGGCGGCATTCCGCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NLESRPDVGTIISALFAKLTGTR*AAFRTV Trigger: CACTGTGCGGAATGCCGCTCATCTTGTACCAGTGAG...TTTGGCAAATAGGGCAGATATGATAGTCCCTACATCGGGCCTTGATTCTAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAAGGGTGCTTCAACTGCAGCTTAGTCAGTCTAGATCCCAGTACTGTTCTGGAAACAATCTGGCAATaGACGGTTCCCAAAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TEGCFNCSLVSLDPSTVLETIWQ*TVPKSS Trigger: GCTGCTTTTGGGAACCGTGCATTGCCAGATTGTTTC...CAGAACAGTACTGGGATCTAGACTGACTAAGCTGCAGTTGAAGCACCCTTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR GCA 90 bp | CTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACAAGTTACTGAGGCTCATGGTACTGTaGTCCATCCTCACTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFAKGKHDKLPPDTDKLLRLMVL*SILTAF Trigger: AAAAGCAGTGAGGATGGAGCACAGTACCATGAGCCT...CAGTAACTTGTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR GCA 90 bp | GTAGCCAGCTTTAACACATTATTCACAAGGGTCAGCTCCTCCTTTTTGTTAGGTGCGGAACCTCAGATTTaGGAGCTCTCCTTGCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: VASFNTLFTRVSSSFLLGAEPQI*ELSLQT Trigger: CGTCTGCAAGGAGAGCTCGCAAATCTGAGGTTCCGC...ACCTAACAAAAAGGAGGAGCTGACCCTTGTGAATAATGTGTTAAAGCTGGCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153194.2 |
||
| CDS-3UTR GCA 90 bp | ATATCTGCCCTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACTTCTTCAACCGGAAATaGGGAACCTCAGATTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ISALFAKGKHDKLPPDTDFFNRK*GTSDLR Trigger: TCGCAAATCTGAGGTTCCGCATTTCCGGTTGAAGAA...GTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAGGGCAGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGTATCTGGATCCGCTCTGCCACCCTTTCAACAATGAAAAACTTCAATGCTACAGCGTTAAGGAGATaGACCAGATCACCAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGIWIRSATLSTMKNFNATALRR*TRSPAP Trigger: GGGAGCTGGTGATCTGGTGCATCTCCTTAACGCTGT...AGCATTGAAGTTTTTCATTGTTGAAAGGGTGGCAGAGCGGATCCAGATACCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCACACAGCATTTGCCATAATTCTACCTCTGGGTTGCTTTTTCTCTATGATCCGTCCCCTTCCCTGTaGACTTCCAAATGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TAHSICHNSTSGLLFLYDPSPSL*TSKWAA Trigger: AGCAGCCCATTTGGAAGTCCACAGGGAAGGGGACGG...ATCATAGAGAAAAAGCAACCCAGAGGTAGAATTATGGCAAATGCTGTGTGCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CCA 90 bp | CCAGAATGCACTTTGGTCATTATTGGACATATTAGAGCGCAGGCAGACGGAACACGGGACCCTCCTCACTaGATACTTCATCAGAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: PECTLVIIGHIRAQADGTRDPPH*ILHQRH Trigger: ATGTCTCTGATGAAGTATCCAGTGAGGAGGGTCCCG...TGTTCCGTCTGCCTGCGCTCTAATATGTCCAATAATGACCAAAGTGCATTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CCA 90 bp | CTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACAAGTTACTGCCACATCTGTCTCACTaGTACAAGATGAGCGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LFAKGKHDKLPPDTDKLLPHLSH*YKMSGI Trigger: AATGCCGCTCATCTTGTACCAGTGAGACAGATGTGG...CAGTAACTTGTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR TCA 90 bp | TGTCAGAGAAGTCCAAGGACTTTCAGGCTTTGCCTTAGCAAATGCAGACCCTCTAACTGTACAGAGCAATaGCAGCATCAGAGAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CQRSPRTFRLCLSKCRPSNCTEQ*QHQREE Trigger: TTCCTCTCTCTGATGCTGTCATTGCTCTGTACAGTT...AGAGGGTCTGCATTTGCTAAGGCAAAGCCTGAAAGTCCTTGGACTTCTCTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156044.2 |
||
| CDS-3UTR GCA 90 bp | AAATACCCAGAATGCACTTTGGTCATTATTGGACATATTAGAGCGCAGGCAGACACAGCGTTAAGGAGATaGACCAGATCACCAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KYPECTLVIIGHIRAQADTALRR*TRSPAP Trigger: GGGAGCTGGTGATCTGGTGCATCTCCTTAACGCTGT...GTCTGCCTGCGCTCTAATATGTCCAATAATGACCAAAGTGCATTCTGGGTATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CCA 90 bp | ATATCTGCCCTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACCCAGGATTAGAGAGATaGCATTTCCAAATACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ISALFAKGKHDKLPPDTDPGLER*HFQIPG Trigger: ACCAGGTATTTGGAAATGCCATCTCTCTAATCCTGG...GTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAGGGCAGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR TCA 90 bp | CCAGAATGCACTTTGGTCATTATTGGACATATTAGAGCGCAGGCAGACGGAACACTTGGGTGTTCTTGTTaGAACAATCTGGCAATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PECTLVIIGHIRAQADGTLGCSC*NNLAMH Trigger: GTGCATTGCCAGATTGTTTCAACAAGAACACCCAAG...TGTTCCGTCTGCCTGCGCTCTAATATGTCCAATAATGACCAAAGTGCATTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR GCA 90 bp | CTAGATCCCAGTACTGTTCTGAAGTATTTCAAGAGCGATCCTGAGCGGACCCTGAAGTACAGACATGTCTaGTTTCTTACAGTCGTTACC | + |
|
Preference number: 4 (lower is better) Translates to: LDPSTVLKYFKSDPERTLKYRHV*FLTVVT Trigger: GGTAACGACTGTAAGAAAGCAGACATGTCTGTACTT...CAGGGTCCGCTCAGGATCGCTCTTGAAATACTTCAGAACAGTACTGGGATCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CCA 90 bp | ATATCTGCCCTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACCTGTGGACTTCCAAATaGGCTGCTTTTCTTAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISALFAKGKHDKLPPDTDLWTSK*AAFLNF Trigger: GAAATTAAGAAAAGCAGCCCATTTGGAAGTCCACAG...GTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAGGGCAGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CCA 90 bp | ACTATCATATCTGCCCTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACGCATTTCCAAATACCTaGTATCCTATGCCTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TIISALFAKGKHDKLPPDAFPNT*YPMPGT Trigger: TGTCCCAGGCATAGGATACCAGGTATTTGGAAATGC...GTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAGGGCAGATATGATAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| 3UTR CAA 72 bp | CGGGACCCTCCTCACTGGATACTTCATCAGAGACATTaGTTATCTTTCTTTGGGTATCTTTGGCAGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: RDPPHWILHQRH*LSFFGYLWQEH Trigger: GTGTTCCTGCCAAAGATACCCAAAGAAAGATAACAAATGTCTCTGATGAAGTATCCAGTGAGGAGGGTCCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
||
| CDS-3UTR TCA 90 bp | AGCAAATGCAGACCCTCTCACAAGATCAACATCGATGAGGTCTGGTTTCACATGGCTCCAATCTTCTTCTaGTACCAGACTATAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SKCRPSHKINIDEVWFHMAPIFF*YQTIAS Trigger: AGATGCTATAGTCTGGTATCAGAAGAAGATTGGAGC...CATGTGAAACCAGACCTCATCGATGTTGATCTTGTGAGAGGGTCTGCATTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156044.2 |
||
| CDS-3UTR TCA 90 bp | CTAGATCCCAGTACTGTTCTGAAGTATTTCAAGAGCGATCCTGAGCGGACCCTGTATTCCTTAAGCCCTTaGTTTCTCTTTGTTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LDPSTVLKYFKSDPERTLYSLSP*FLFVQQ Trigger: CTGTTGAACAAAGAGAAATCAAGGGCTTAAGGAATA...CAGGGTCCGCTCAGGATCGCTCTTGAAATACTTCAGAACAGTACTGGGATCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR TCA 90 bp | AAATACCCAGAATGCACTTTGGTCATTATTGGACATATTAGAGCGCAGGCAGACCCACATGGATTTATCTaGGGGTTTCCCACATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KYPECTLVIIGHIRAQADPHGFI*GFPTSV Trigger: GACAGATGTGGGAAACCCTCAGATAAATCCATGTGG...GTCTGCCTGCGCTCTAATATGTCCAATAATGACCAAAGTGCATTCTGGGTATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGTATCTGGATCCGCTCTGCCACCCTTTCAACAATGAAAAACTTCAATGCTCTTTGCCTTAGCAAATaGAGACCCTCTCACAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SGIWIRSATLSTMKNFNALCLSK*RPSHKI Trigger: GATCTTGTGAGAGGGTCTGCATTTGCTAAGGCAAAG...AGCATTGAAGTTTTTCATTGTTGAAAGGGTGGCAGAGCGGATCCAGATACCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR GCA 90 bp | TTCAACTGCAGCTTAGTCAGTCTAGATCCCAGTACTGTTCTGAAGTATTTCAAGCAGATTCTGGCCTTGTaGTCTCAGAATCCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FNCSLVSLDPSTVLKYFKQILAL*SQNPVW Trigger: CCAGACAGGATTCTGAGAGCACAAGGCCAGAATCTG...CTTGAAATACTTCAGAACAGTACTGGGATCTAGACTGACTAAGCTGCAGTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR GCA 90 bp | AACTTAGAATCAAGGCCCGATGTAGGGACTATCATATCTGCCCTATTTGCCAAATTTGCGAGCTCTCCTTaGAGACGTCAAGTGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NLESRPDVGTIISALFAKFASSP*RRQVSK Trigger: TTTGGACACTTGACGTCTGCAAGGAGAGCTCGCAAA...TTTGGCAAATAGGGCAGATATGATAGTCCCTACATCGGGCCTTGATTCTAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS-3UTR GCA 90 bp | TGCAGCTTAGTCAGTCTAGATCCCAGTACTGTTCTGAAGTATTTCAAGAGCGATTTTGCGAGCTCTCCTTaGAGACGTCAAGTGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSLVSLDPSTVLKYFKSDFASSP*RRQVSK Trigger: TTTGGACACTTGACGTCTGCAAGGAGAGCTCGCAAA...ATCGCTCTTGAAATACTTCAGAACAGTACTGGGATCTAGACTGACTAAGCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS-3UTR GCA 90 bp | TATTTAAGTGTGGTAGGAACAGCATACGCTATAGTGTACCATGGGAAATTCTTTGCGGAACCTCAGATTTaGGAGCTCTCCTTGCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: YLSVVGTAYAIVYHGKFFAEPQI*ELSLQT Trigger: CGTCTGCAAGGAGAGCTCGCAAATCTGAGGTTCCGC...AAAGAATTTCCCATGGTACACTATAGCGTATGCTGTTCCTACCACACTTAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGTATCTGGATCCGCTCTGCCACCCTTTCAACAATGAAAAACTTCAATGCTTGCCTAGTGGAGGCTTaGGTGTTCTTGTTGAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SGIWIRSATLSTMKNFNACLVEA*VFLLKQ Trigger: TTGTTTCAACAAGAACACCCAAGCCTCCACTAGGCA...AGCATTGAAGTTTTTCATTGTTGAAAGGGTGGCAGAGCGGATCCAGATACCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CCA 90 bp | AGACAACGCACTATTTCAGAGTTAAAGACGTATTCCTCAAGTAAGGCAAGTTCAAGTTCTGACGCAGAATaGGCTGTGAGCTGCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RQRTISELKTYSSSKASSSSDAE*AVSCSK Trigger: CTTGGAGCAGCTCACAGCCCATTCTGCGTCAGAACT...TGAACTTGCCTTACTTGAGGAATACGTCTTTAACTCTGAAATAGTGCGTTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| 3UTR CAA 72 bp | TCCCATCGAGGGACACATAGCCATTGTCAGTCTCGGTaGACTTATCAATTGAATTCTTTGCCTTCTTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: SHRGTHSHCQSR*TYQLNSLPSLT Trigger: GGTCAAAGAAGGCAAAGAATTCAATTGATAAGTCAACCGAGACTGACAATGGCTATGTGTCCCTCGATGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124431.8 |
||
| CDS-3UTR GCA 90 bp | AACTTAGAATCAAGGCCCGATGTAGGGACTATCATATCTGCCCTATTTGCCAAATTCTTCAACCGGAAATaGGGAACCTCAGATTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: NLESRPDVGTIISALFAKFFNRK*GTSDLR Trigger: TCGCAAATCTGAGGTTCCGCATTTCCGGTTGAAGAA...TTTGGCAAATAGGGCAGATATGATAGTCCCTACATCGGGCCTTGATTCTAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS-3UTR GCA 90 bp | CTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACAAGTTACTGGTAGGATTGAGGTATTaGTGTATTTCTTGCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFAKGKHDKLPPDTDKLLVGLRY*CISCWF Trigger: AAACCAGCAAGAAATACAGCAATACCTCAATCCTAC...CAGTAACTTGTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS-3UTR CCA 90 bp | TATTTAAGTGTGGTAGGAACAGCATACGCTATAGTGTACCATGGGAAATTCTTTCCAGGCTGCGTCTTCTaGTCCAACAGTTTCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: YLSVVGTAYAIVYHGKFFPGCVF*SNSFTL Trigger: CAGTGTGAAACTGTTGGACCAGAAGACGCAGCCTGG...AAAGAATTTCCCATGGTACACTATAGCGTATGCTGTTCCTACCACACTTAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCACACAGCATTTGCCATAATTCTACCTCTGGGTTGCTTTTTCTCTATGATTTCTTTGGGTATCTTTaGCAGGAACACTCCTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TAHSICHNSTSGLLFLYDFFGYL*QEHSLA Trigger: CGCCAAGGAGTGTTCCTGCCAAAGATACCCAAAGAA...ATCATAGAGAAAAAGCAACCCAGAGGTAGAATTATGGCAAATGCTGTGTGCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCACACAGCATTTGCCATAATTCTACCTCTGGGTTGCTTTTTCTCTATGATCTGGTATCCTATGCCTaGGACATGGTTGTTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TAHSICHNSTSGLLFLYDLVSYA*DMVVHS Trigger: AGAGTGAACAACCATGTCCCAGGCATAGGATACCAG...ATCATAGAGAAAAAGCAACCCAGAGGTAGAATTATGGCAAATGCTGTGTGCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR TCA 90 bp | TGCAGCTTAGTCAGTCTAGATCCCAGTACTGTTCTGAAGTATTTCAAGAGCGATGCTCCAATCTTCTTCTaGTACCAGACTATAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: CSLVSLDPSTVLKYFKSDAPIFF*YQTIAS Trigger: AGATGCTATAGTCTGGTATCAGAAGAAGATTGGAGC...ATCGCTCTTGAAATACTTCAGAACAGTACTGGGATCTAGACTGACTAAGCTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR TCA 90 bp | AACTTAGAATCAAGGCCCGATGTAGGGACTATCATATCTGCCCTATTTGCCAAATTTCTTGCTGGTTTCTaGTCCAAGAGTAACGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: NLESRPDVGTIISALFAKFLAGF*SKSNEP Trigger: AGGTTCGTTACTCTTGGATCAGAAACCAGCAAGAAA...TTTGGCAAATAGGGCAGATATGATAGTCCCTACATCGGGCCTTGATTCTAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS-3UTR GCA 90 bp | TTCAACTGCAGCTTAGTCAGTCTAGATCCCAGTACTGTTCTGAAGTATTTCAAGATACCTGGTATCCTATaGCTGGGACATGGTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FNCSLVSLDPSTVLKYFKIPGIL*LGHGCS Trigger: TGAACAACCATGTCCCAGGCATAGGATACCAGGTAT...CTTGAAATACTTCAGAACAGTACTGGGATCTAGACTGACTAAGCTGCAGTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CCA 90 bp | CTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACAAGTTACTGCTTTTTATAATGGTGTaGCTTTCTATTTCGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: LFAKGKHDKLPPDTDKLLLFIMV*LSISKT Trigger: GGTCTTCGAAATAGAAAGCCACACCATTATAAAAAG...CAGTAACTTGTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR TCA 90 bp | AGACAACGCACTATTTCAGAGTTAAAGACGTATTCCTCAAGTAAGGCAAGTTCAAATCACATAAAGTTCTaGCGCAGAATGGGCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQRTISELKTYSSSKASSNHIKF*RRMGCE Trigger: CTCACAGCCCATTCTGCGTCAGAACTTTATGTGATT...TGAACTTGCCTTACTTGAGGAATACGTCTTTAACTCTGAAATAGTGCGTTGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CCA 90 bp | AAATACCCAGAATGCACTTTGGTCATTATTGGACATATTAGAGCGCAGGCAGACAACATCGATGAGGTCTaGTTTCACATGTGCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KYPECTLVIIGHIRAQADNIDEV*FHMCCF Trigger: AAAACAGCACATGTGAAACCAGACCTCATCGATGTT...GTCTGCCTGCGCTCTAATATGTCCAATAATGACCAAAGTGCATTCTGGGTATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CCA 90 bp | AACTTAGAATCAAGGCCCGATGTAGGGACTATCATATCTGCCCTATTTGCCAAATTCTTTCTTCCCACATaGATTTATCTGAGGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NLESRPDVGTIISALFAKFFLPT*IYLRVS Trigger: GGAAACCCTCAGATAAATCCATGTGGGAAGAAAGAA...TTTGGCAAATAGGGCAGATATGATAGTCCCTACATCGGGCCTTGATTCTAAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR TCA 90 bp | AGACAACGCACTATTTCAGAGTTAAAGACGTATTCCTCAAGTAAGGCAAGTTCATTTCTTGCTGGTTTCTaGTCCAAGAGTAACGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: RQRTISELKTYSSSKASSFLAGF*SKSNEP Trigger: AGGTTCGTTACTCTTGGATCAGAAACCAGCAAGAAA...TGAACTTGCCTTACTTGAGGAATACGTCTTTAACTCTGAAATAGTGCGTTGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS-3UTR CCA 90 bp | TATTTAAGTGTGGTAGGAACAGCATACGCTATAGTGTACCATGGGAAATTCTTTTTCGGTTTCAGATTCTaGCCTTGTGCTCTCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: YLSVVGTAYAIVYHGKFFFGFRF*PCALRI Trigger: GATTCTGAGAGCACAAGGCCAGAATCTGAAACCGAA...AAAGAATTTCCCATGGTACACTATAGCGTATGCTGTTCCTACCACACTTAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR GCA 90 bp | AAATACCCAGAATGCACTTTGGTCATTATTGGACATATTAGAGCGCAGGCAGACAGGGGCATCCTCATTTaGATAATGCTTTTTATAATG | + |
|
Preference number: 4 (lower is better) Translates to: KYPECTLVIIGHIRAQADRGILI*IMLFIM Trigger: CATTATAAAAAGCATTATGCAAATGAGGATGCCCCT...GTCTGCCTGCGCTCTAATATGTCCAATAATGACCAAAGTGCATTCTGGGTATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR GCA 90 bp | GTAGCCAGCTTTAACACATTATTCACAAGGGTCAGCTCCTCCTTTTTGTTAGGTGCAAAGAGTAATCGTTaGTTATATGTTCTTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VASFNTLFTRVSSSFLLGAKSNR*LYVLSA Trigger: AGCAGAAAGAACATATAAGCAACGATTACTCTTTGC...ACCTAACAAAAAGGAGGAGCTGACCCTTGTGAATAATGTGTTAAAGCTGGCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153194.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCACACAGCATTTGCCATAATTCTACCTCTGGGTTGCTTTTTCTCTATGATGCAAAGAGTAATCGTTaGTTATATGTTCTTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TAHSICHNSTSGLLFLYDAKSNR*LYVLSA Trigger: AGCAGAAAGAACATATAAGCAACGATTACTCTTTGC...ATCATAGAGAAAAAGCAACCCAGAGGTAGAATTATGGCAAATGCTGTGTGCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CCA 90 bp | TTCAACTGCAGCTTAGTCAGTCTAGATCCCAGTACTGTTCTGAAGTATTTCAAGTTTGTTATCTTTCTTTaGGTATCTTTGGCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: FNCSLVSLDPSTVLKYFKFVIFL*VSLAGT Trigger: TGTTCCTGCCAAAGATACCCAAAGAAAGATAACAAA...CTTGAAATACTTCAGAACAGTACTGGGATCTAGACTGACTAAGCTGCAGTTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR GCA 90 bp | TATTTAAGTGTGGTAGGAACAGCATACGCTATAGTGTACCATGGGAAATTCTTTGTAGGATTGAGGTATTaGTGTATTTCTTGCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YLSVVGTAYAIVYHGKFFVGLRY*CISCWF Trigger: AAACCAGCAAGAAATACAGCAATACCTCAATCCTAC...AAAGAATTTCCCATGGTACACTATAGCGTATGCTGTTCCTACCACACTTAAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS-3UTR GCA 90 bp | TATTTAAGTGTGGTAGGAACAGCATACGCTATAGTGTACCATGGGAAATTCTTTGTCTGGTTTCACATGTaGTGTTTTCTTTGGTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: YLSVVGTAYAIVYHGKFFVWFHM*CFLWFI Trigger: AATAAACCAAAGAAAACAGCACATGTGAAACCAGAC...AAAGAATTTCCCATGGTACACTATAGCGTATGCTGTTCCTACCACACTTAAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGAGCAGAGCCACCCACTGCTTCCAGCCAGCTCCATCAGCGCTCGTGCTCTTTTCAGATTCTGGCCTaGTGCTCTCAGAATCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PGAEPPTASSQLHQRSCSFQILA*CSQNPV Trigger: GACAGGATTCTGAGAGCACAAGGCCAGAATCTGAAA...AGAGCACGAGCGCTGATGGAGCTGGCTGGAAGCAGTGGGTGGCTCTGCTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAAGGGTGCTTCAACTGCAGCTTAGTCAGTCTAGATCCCAGTACTGTTCTGTGGCAGGAACACTCCTaGGCGTTCGTGTGGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TEGCFNCSLVSLDPSTVLWQEHS*AFVWPR Trigger: CCTGGGCCACACGAACGCCAAGGAGTGTTCCTGCCA...CAGAACAGTACTGGGATCTAGACTGACTAAGCTGCAGTTGAAGCACCCTTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CCA 90 bp | CCGCCTGTGCCTAGTGGAGGCTTGGGTGTTCTTGTTGAAACAATCTaGCAATGCACGGTTCCCAAAAGCAGCATCAGCCATATTGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PPVPSGGLGVLVETI*QCTVPKSSISHIGP Trigger: TGGGCCAATATGGCTGATGCTGCTTTTGGGAACCGTGCATTGCCAGATTGTTTCAACAAGAACACCCAAGCCTCCACTAGGCACAGGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CAA 90 bp | ATATCTGCCCTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACTGCGGAACCTCAGATTaGCGAGCTCTCCTTGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ISALFAKGKHDKLPPDTDCGTSD*RALLAD Trigger: GTCTGCAAGGAGAGCTCGCAAATCTGAGGTTCCGCA...GTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAGGGCAGATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS TCA 90 bp | GGTTTCAGATTCTGGCCTTGTGCTCTCAGAATCCTGTCTGGAACTTaGACAGCGAGAGCTGCAACTAGTACCCGATTTAGGGGCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GFRFWPCALRILSGT*TARAATSTRFRGIL Trigger: GAGGATGCCCCTAAATCGGGTACTAGTTGCAGCTCTCGCTGTTCAAGTTCCAGACAGGATTCTGAGAGCACAAGGCCAGAATCTGAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS GCA 90 bp | GTGCCTAGTGGAGGCTTGGGTGTTCTTGTTGAAACAATCTGGCAATaGACGGTTCCCAAAAGCAGCATCAGCCATATTGGCCCAATCACT | + |
|
Preference number: 5 (lower is better) Translates to: VPSGGLGVLVETIWQ*TVPKSSISHIGPIT Trigger: AGTGATTGGGCCAATATGGCTGATGCTGCTTTTGGGAACCGTGCATTGCCAGATTGTTTCAACAAGAACACCCAAGCCTCCACTAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CAA 90 bp | GGGTGCACCAGATTAAATCTGGAAGCTAGAACTGGTAGGCTGGAGCTGTCCTTCGCAGCATCAGCCATATaGGCCCAATCACTTCAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: GCTRLNLEARTGRLELSFAASAI*AQSLQL Trigger: TAACTGAAGTGATTGGGCCAATATGGCTGATGCTGC...GAAGGACAGCTCCAGCCTACCAGTTCTAGCTTCCAGATTTAATCTGGTGCACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CAA 90 bp | CTAGATCCCAGTACTGTTCTGAAGTATTTCAAGAGCGATCCTGAGCGGACCCTGGTGCCTAGTGGAGGCTaGGGTGTTCTTGTTGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: LDPSTVLKYFKSDPERTLVPSGG*GVLVET Trigger: TGTTTCAACAAGAACACCCAAGCCTCCACTAGGCAC...CAGGGTCCGCTCAGGATCGCTCTTGAAATACTTCAGAACAGTACTGGGATCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CCA 90 bp | TTATCTGTGGTGCTAGAACCGTCCCCTTCCCTGTGGACTTCCAAATaGGCTGCTTTTCTTAATTTCCTTCTTCGTTTACCGCCTGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSVVLEPSPSLWTSK*AAFLNFLLRLPPVP Trigger: AGGCACAGGCGGTAAACGAAGAAGGAAATTAAGAAAAGCAGCCCATTTGGAAGTCCACAGGGAAGGGGACGGTTCTAGCACCACAGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CCA 90 bp | TCTTCCCACATGGATTTATCTGAGGGTTTCCCACATCTGTCTCACTaGTACAAGATGAGCGGCATTCCGCACAGTGTAACAAGTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSHMDLSEGFPHLSH*YKMSGIPHSVTSLP Trigger: GGGAAGACTTGTTACACTGTGCGGAATGCCGCTCATCTTGTACCAGTGAGACAGATGTGGGAAACCCTCAGATAAATCCATGTGGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CCA 90 bp | CCCTCCTGTGTGTTATCTGTGGTGCTAGAACCGTCCCCTTCCCTGTaGACTTCCAAATGGGCTGCTTTTCTTAATTTCCTTCTTCGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: PSCVLSVVLEPSPSL*TSKWAAFLNFLLRL Trigger: TAAACGAAGAAGGAAATTAAGAAAAGCAGCCCATTTGGAAGTCCACAGGGAAGGGGACGGTTCTAGCACCACAGATAACACACAGGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CAA 90 bp | TGCAGCTTAGTCAGTCTAGATCCCAGTACTGTTCTGAAGTATTTCAAGAGCGATTGCGGAACCTCAGATTaGCGAGCTCTCCTTGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CSLVSLDPSTVLKYFKSDCGTSD*RALLAD Trigger: GTCTGCAAGGAGAGCTCGCAAATCTGAGGTTCCGCA...ATCGCTCTTGAAATACTTCAGAACAGTACTGGGATCTAGACTGACTAAGCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS GCA 90 bp | ACAAGTCTTCCCATAATACATCTTCGGTTTCAGATTCTGGCCTTGTaGTCTCAGAATCCTGTCTGGAACTTGAACAGCGAGAGCTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TSLPIIHLRFQILAL*SQNPVWNLNSESCN Trigger: GTTGCAGCTCTCGCTGTTCAAGTTCCAGACAGGATTCTGAGAGCACAAGGCCAGAATCTGAAACCGAAGATGTATTATGGGAAGACTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CCA 90 bp | TTCTTAATTTCCTTCTTCGTTTACCGCCTGTGCCTAGTGGAGGCTTaGGTGTTCTTGTTGAAACAATCTGGCAATGCACGGTTCCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: FLISFFVYRLCLVEA*VFLLKQSGNARFPK Trigger: TTTTGGGAACCGTGCATTGCCAGATTGTTTCAACAAGAACACCCAAGCCTCCACTAGGCACAGGCGGTAAACGAAGAAGGAAATTAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CCA 90 bp | AATGGGGTCAAGCCCAGGATTAGAGAGATGGCATTTCCAAATACCTaGTATCCTATGCCTGGGACATGGTTGTTCACTCTGTTCATTATC | + |
|
Preference number: 5 (lower is better) Translates to: NGVKPRIREMAFPNT*YPMPGTWLFTLFII Trigger: GATAATGAACAGAGTGAACAACCATGTCCCAGGCATAGGATACCAGGTATTTGGAAATGCCATCTCTCTAATCCTGGGCTTGACCCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CAA 90 bp | ATATCTGCCCTATTTGCCAAAGGGAAACATGATAAGCTCCCACCGGACACGGACAGTGTCCAAAGAGTTTaGCAAAGAGTAATCGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ISALFAKGKHDKLPPDTDSVQRV*QRVIVA Trigger: AGCAACGATTACTCTTTGCAAAACTCTTTGGACACT...GTCCGTGTCCGGTGGGAGCTTATCATGTTTCCCTTTGGCAAATAGGGCAGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS-3UTR CAA 90 bp | CTAGATCCCAGTACTGTTCTGAAGTATTTCAAGAGCGATCCTGAGCGGACCCTGAGTAGGATTGAGGTATaGCTGTATTTCTTGCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LDPSTVLKYFKSDPERTLSRIEV*LYFLLV Trigger: AACCAGCAAGAAATACAGCAATACCTCAATCCTACT...CAGGGTCCGCTCAGGATCGCTCTTGAAATACTTCAGAACAGTACTGGGATCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGCTTAGTCAGTCTAGATCCCAGTACTGTTCTGAAGTATTTCAAGAGCGATTTTCTTTGGGTATCTTaGGCAGGAACACTCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CSLVSLDPSTVLKYFKSDFLWVS*AGTLLG Trigger: GCCAAGGAGTGTTCCTGCCAAAGATACCCAAAGAAA...ATCGCTCTTGAAATACTTCAGAACAGTACTGGGATCTAGACTGACTAAGCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CAA 90 bp | CTAGATCCCAGTACTGTTCTGAAGTATTTCAAGAGCGATCCTGAGCGGACCCTGATTTGTTATCTTTCTTaGGGTATCTTTGGCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LDPSTVLKYFKSDPERTLICYLS*GIFGRN Trigger: GTTCCTGCCAAAGATACCCAAAGAAAGATAACAAAT...CAGGGTCCGCTCAGGATCGCTCTTGAAATACTTCAGAACAGTACTGGGATCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCACACAGCATTTGCCATAATTCTACCTCTGGGTTGCTTTTTCTCTATGATAATCCTGTCTGGAACTaGAACAGCGAGAGCTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TAHSICHNSTSGLLFLYDNPVWN*NSESCN Trigger: GTTGCAGCTCTCGCTGTTCAAGTTCCAGACAGGATT...ATCATAGAGAAAAAGCAACCCAGAGGTAGAATTATGGCAAATGCTGTGTGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAAGGGTGCTTCAACTGCAGCTTAGTCAGTCTAGATCCCAGTACTGTTCTGAGTAGGATTGAGGTATaGCTGTATTTCTTGCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TEGCFNCSLVSLDPSTVLSRIEV*LYFLLV Trigger: AACCAGCAAGAAATACAGCAATACCTCAATCCTACT...CAGAACAGTACTGGGATCTAGACTGACTAAGCTGCAGTTGAAGCACCCTTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS CCA 90 bp | ATGACTCTGATGAAAAGGGTCGTCTCTATATTCTTTCTTCCCACATaGATTTATCTGAGGGTTTCCCACATCTGTCTCACTGGTACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: MTLMKRVVSIFFLPT*IYLRVSHICLTGTR Trigger: TCTTGTACCAGTGAGACAGATGTGGGAAACCCTCAGATAAATCCATGTGGGAAGAAAGAATATAGAGACGACCCTTTTCATCAGAGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCACACAGCATTTGCCATAATTCTACCTCTGGGTTGCTTTTTCTCTATGATGAGGCTTGGGTGTTCTaGTTGAAACAATCTGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: TAHSICHNSTSGLLFLYDEAWVF*LKQSGN Trigger: ATTGCCAGATTGTTTCAACAAGAACACCCAAGCCTC...ATCATAGAGAAAAAGCAACCCAGAGGTAGAATTATGGCAAATGCTGTGTGCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CAA 90 bp | TCAGGTATCTGGATCCGCTCTGCCACCCTTTCAACAATGAAAAACTTCAATGCTCATTGTCAGTCTCGGTaGACTTATCAATTGAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGIWIRSATLSTMKNFNAHCQSR*TYQLNS Trigger: AGAATTCAATTGATAAGTCAACCGAGACTGACAATG...AGCATTGAAGTTTTTCATTGTTGAAAGGGTGGCAGAGCGGATCCAGATACCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CAA 90 bp | TGCAGCTTAGTCAGTCTAGATCCCAGTACTGTTCTGAAGTATTTCAAGAGCGATAGTGTCCAAAGAGTTTaGCAAAGAGTAATCGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CSLVSLDPSTVLKYFKSDSVQRV*QRVIVA Trigger: AGCAACGATTACTCTTTGCAAAACTCTTTGGACACT...ATCGCTCTTGAAATACTTCAGAACAGTACTGGGATCTAGACTGACTAAGCTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS GCA 90 bp | CACTCTGTTCATTATCATCCCACTGATTTCAAGTACAGACATGTCTaGTTTCTTACAGTCGTTACCTTCCCACACTATAGCACTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSVHYHPTDFKYRHV*FLTVVTFPHYSTDF Trigger: AAAATCAGTGCTATAGTGTGGGAAGGTAACGACTGTAAGAAAGCAGACATGTCTGTACTTGAAATCAGTGGGATGATAATGAACAGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCACACAGCATTTGCCATAATTCTACCTCTGGGTTGCTTTTTCTCTATGATTACTATTGCAGCAACTaGGAGAAGATAGAGAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: TAHSICHNSTSGLLFLYDYYCSN*EKIENK Trigger: CTTGTTCTCTATCTTCTCCAAGTTGCTGCAATAGTA...ATCATAGAGAAAAAGCAACCCAGAGGTAGAATTATGGCAAATGCTGTGTGCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS-3UTR CAA 90 bp | AGACAACGCACTATTTCAGAGTTAAAGACGTATTCCTCAAGTAAGGCAAGTTCACATGTGCTGTTTTCTTaGGTTTATTCCTTAAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RQRTISELKTYSSSKASSHVLFS*VYSLSP Trigger: AGGGCTTAAGGAATAAACCAAAGAAAACAGCACATG...TGAACTTGCCTTACTTGAGGAATACGTCTTTAACTCTGAAATAGTGCGTTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CAA 90 bp | TTCTTCGTTTACCGCCTGTGCCTAGTGGAGGCTTGGGTGTTCTTGTaGAAACAATCTGGCAATGCACGGTTCCCAAAAGCAGCATCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FFVYRLCLVEAWVFL*KQSGNARFPKAASA Trigger: GGCTGATGCTGCTTTTGGGAACCGTGCATTGCCAGATTGTTTCAACAAGAACACCCAAGCCTCCACTAGGCACAGGCGGTAAACGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CCA 72 bp | TCCTTCTTCGTTTACCGCCTGTGCCTAGTGGAGGCTTaGGTGTTCTTGTTGAAACAATCTGGCAATGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: SFFVYRLCLVEA*VFLLKQSGNAR Trigger: CCGTGCATTGCCAGATTGTTTCAACAAGAACACCCAAGCCTCCACTAGGCACAGGCGGTAAACGAAGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CAA 72 bp | TACCGCCTGTGCCTAGTGGAGGCTTGGGTGTTCTTGTaGAAACAATCTGGCAATGCACGGTTCCCAAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: YRLCLVEAWVFL*KQSGNARFPKA Trigger: TGCTTTTGGGAACCGTGCATTGCCAGATTGTTTCAACAAGAACACCCAAGCCTCCACTAGGCACAGGCGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CAA 90 bp | TCCTTCTTCGTTTACCGCCTGTGCCTAGTGGAGGCTTGGGTGTTCTaGTTGAAACAATCTGGCAATGCACGGTTCCCAAAAGCAGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SFFVYRLCLVEAWVF*LKQSGNARFPKAAS Trigger: TGATGCTGCTTTTGGGAACCGTGCATTGCCAGATTGTTTCAACAAGAACACCCAAGCCTCCACTAGGCACAGGCGGTAAACGAAGAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS TCA 72 bp | TTCTGGCCTTGTGCTCTCAGAATCCTGTCTGGAACTTaGACAGCGAGAGCTGCAACTAGTACCCGATTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: FWPCALRILSGT*TARAATSTRFR Trigger: CCTAAATCGGGTACTAGTTGCAGCTCTCGCTGTTCAAGTTCCAGACAGGATTCTGAGAGCACAAGGCCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS GCA 72 bp | GGAGGCTTGGGTGTTCTTGTTGAAACAATCTGGCAATaGACGGTTCCCAAAAGCAGCATCAGCCATATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGLGVLVETIWQ*TVPKSSISHIG Trigger: GCCAATATGGCTGATGCTGCTTTTGGGAACCGTGCATTGCCAGATTGTTTCAACAAGAACACCCAAGCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CCA 72 bp | CCTAGTGGAGGCTTGGGTGTTCTTGTTGAAACAATCTaGCAATGCACGGTTCCCAAAAGCAGCATCAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PSGGLGVLVETI*QCTVPKSSISH Trigger: ATGGCTGATGCTGCTTTTGGGAACCGTGCATTGCCAGATTGTTTCAACAAGAACACCCAAGCCTCCACTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CAA 72 bp | GTTTACCGCCTGTGCCTAGTGGAGGCTTGGGTGTTCTaGTTGAAACAATCTGGCAATGCACGGTTCCCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: VYRLCLVEAWVF*LKQSGNARFPK Trigger: TTTTGGGAACCGTGCATTGCCAGATTGTTTCAACAAGAACACCCAAGCCTCCACTAGGCACAGGCGGTAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CAA 72 bp | TTCCTTCTTCGTTTACCGCCTGTGCCTAGTGGAGGCTaGGGTGTTCTTGTTGAAACAATCTGGCAATGCACG | + |
|
Preference number: 6 (lower is better) Translates to: FLLRLPPVPSGG*GVLVETIWQCT Trigger: CGTGCATTGCCAGATTGTTTCAACAAGAACACCCAAGCCTCCACTAGGCACAGGCGGTAAACGAAGAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS GCA 72 bp | GTACTTTCTTCAACCGGAAATGCGGAACCTCAGATTTaGGAGCTCTCCTTGCAGACGTCAAGTGTCCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: VLSSTGNAEPQI*ELSLQTSSVQR Trigger: TCTTTGGACACTTGACGTCTGCAAGGAGAGCTCGCAAATCTGAGGTTCCGCATTTCCGGTTGAAGAAAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS CCA 72 bp | GTGCTAGAACCGTCCCCTTCCCTGTGGACTTCCAAATaGGCTGCTTTTCTTAATTTCCTTCTTCGTTTACCG | + |
|
Preference number: 6 (lower is better) Translates to: VLEPSPSLWTSK*AAFLNFLLRLP Trigger: CGGTAAACGAAGAAGGAAATTAAGAAAAGCAGCCCATTTGGAAGTCCACAGGGAAGGGGACGGTTCTAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CAA 72 bp | GGCAATGCACGGTTCCCAAAAGCAGCATCAGCCATATaGGCCCAATCACTTCAGTTAGAGGTATGCTATGTG | + |
|
Preference number: 6 (lower is better) Translates to: GNARFPKAASAI*AQSLQLEVCYV Trigger: CACATAGCATACCTCTAACTGAAGTGATTGGGCCAATATGGCTGATGCTGCTTTTGGGAACCGTGCATTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CAA 72 bp | TGTACTTTCTTCAACCGGAAATGCGGAACCTCAGATTaGCGAGCTCTCCTTGCAGACGTCAAGTGTCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: CTFFNRKCGTSD*RALLADVKCPK Trigger: CTTTGGACACTTGACGTCTGCAAGGAGAGCTCGCAAATCTGAGGTTCCGCATTTCCGGTTGAAGAAAGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118174.8 ENSMUST00000153194.2 |
||
| CDS CAA 90 bp | GTAACAAGTCTTCCCATAATACATCTTCGGTTTCAGATTCTGGCCTaGTGCTCTCAGAATCCTGTCTGGAACTTGAACAGCGAGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VTSLPIIHLRFQILA*CSQNPVWNLNSESC Trigger: GCAGCTCTCGCTGTTCAAGTTCCAGACAGGATTCTGAGAGCACAAGGCCAGAATCTGAAACCGAAGATGTATTATGGGAAGACTTGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS TCA 72 bp | ATCTTCGTTAGAGCCAAACGCAATCACATAAAGTTCTaGCGCAGAATGGGCTGTGAGCTGCTCCAAGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: IFVRAKRNHIKF*RRMGCELLQVC Trigger: ACAGACTTGGAGCAGCTCACAGCCCATTCTGCGTCAGAACTTTATGTGATTGCGTTTGGCTCTAACGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS GCA 72 bp | CCCATAATACATCTTCGGTTTCAGATTCTGGCCTTGTaGTCTCAGAATCCTGTCTGGAACTTGAACAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: PIIHLRFQILAL*SQNPVWNLNSE Trigger: CTCGCTGTTCAAGTTCCAGACAGGATTCTGAGAGCACAAGGCCAGAATCTGAAACCGAAGATGTATTATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CCA 72 bp | GTGTTATCTGTGGTGCTAGAACCGTCCCCTTCCCTGTaGACTTCCAAATGGGCTGCTTTTCTTAATTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VLSVVLEPSPSL*TSKWAAFLNFL Trigger: AAGGAAATTAAGAAAAGCAGCCCATTTGGAAGTCCACAGGGAAGGGGACGGTTCTAGCACCACAGATAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CCA 72 bp | AAGCCCAGGATTAGAGAGATGGCATTTCCAAATACCTaGTATCCTATGCCTGGGACATGGTTGTTCACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: KPRIREMAFPNT*YPMPGTWLFTL Trigger: CAGAGTGAACAACCATGTCCCAGGCATAGGATACCAGGTATTTGGAAATGCCATCTCTCTAATCCTGGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CAA 90 bp | TTTCTTAATTTCCTTCTTCGTTTACCGCCTGTGCCTAGTGGAGGCTaGGGTGTTCTTGTTGAAACAATCTGGCAATGCACGGTTCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: FLNFLLRLPPVPSGG*GVLVETIWQCTVPK Trigger: TTTGGGAACCGTGCATTGCCAGATTGTTTCAACAAGAACACCCAAGCCTCCACTAGGCACAGGCGGTAAACGAAGAAGGAAATTAAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CAA 72 bp | CTTCCCATAATACATCTTCGGTTTCAGATTCTGGCCTaGTGCTCTCAGAATCCTGTCTGGAACTTGAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: LPIIHLRFQILA*CSQNPVWNLNS Trigger: GCTGTTCAAGTTCCAGACAGGATTCTGAGAGCACAAGGCCAGAATCTGAAACCGAAGATGTATTATGGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS GCA 72 bp | CTGCTTTTCTTAATTTCCTTCTTCGTTTACCGCCTGTaGCTAGTGGAGGCTTGGGTGTTCTTGTTGAAACAA | + |
|
Preference number: 6 (lower is better) Translates to: LLFLISFFVYRL*LVEAWVFLLKQ Trigger: TTGTTTCAACAAGAACACCCAAGCCTCCACTAGGCACAGGCGGTAAACGAAGAAGGAAATTAAGAAAAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS CCA 72 bp | AGAGATGGCATTTCCAAATACCTGGTATCCTATGCCTaGGACATGGTTGTTCACTCTGTTCATTATCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: RDGISKYLVSYA*DMVVHSVHYHP Trigger: GGGATGATAATGAACAGAGTGAACAACCATGTCCCAGGCATAGGATACCAGGTATTTGGAAATGCCATCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS GCA 72 bp | CATTATCATCCCACTGATTTCAAGTACAGACATGTCTaGTTTCTTACAGTCGTTACCTTCCCACACTATAGC | + |
|
Preference number: 6 (lower is better) Translates to: HYHPTDFKYRHV*FLTVVTFPHYS Trigger: GCTATAGTGTGGGAAGGTAACGACTGTAAGAAAGCAGACATGTCTGTACTTGAAATCAGTGGGATGATAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||
| CDS GCA 72 bp | TTAGAGAGATGGCATTTCCAAATACCTGGTATCCTATaGCTGGGACATGGTTGTTCACTCTGTTCATTATCA | + |
|
Preference number: 6 (lower is better) Translates to: LERWHFQIPGIL*LGHGCSLCSLS Trigger: TGATAATGAACAGAGTGAACAACCATGTCCCAGGCATAGGATACCAGGTATTTGGAAATGCCATCTCTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118174.8 |
||