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Pregenerated sensors for PHPT1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000036504

Ensembl transcript IDs: ENSMUST00000039156.7

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTATGGACCAGATTGGTCTGGCCTCTAAGGCCTGGCAGGTGCTATaGTGCCTAAGGTACAAAAGGAAAGCACAGGGCCAGCCCCTCAAA +
Preference number: 1 (lower is better)
Translates to: PMDQIGLASKAWQVL*CLRYKRKAQGQPLK
Trigger: TTTGAGGGGCTGGCCCTGTGCTTTCCTTTTGTACCTTAGGCAGCATAGCACCTGCCAGGCCTTAGAGGCCAGACCAATCTGGTCCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039156.7
3UTR GCA 72 bp ATTGGTCTGGCCTCTAAGGCCTGGCAGGTGCTATGCTaGCTAAGGTACAAAAGGAAAGCACAGGGCCAGCCC +
Preference number: 3 (lower is better)
Translates to: IGLASKAWQVLC*LRYKRKAQGQP
Trigger: GGGCTGGCCCTGTGCTTTCCTTTTGTACCTTAGGCAGCATAGCACCTGCCAGGCCTTAGAGGCCAGACCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039156.7
3UTR GCA 72 bp CAGATTGGTCTGGCCTCTAAGGCCTGGCAGGTGCTATaGTGCCTAAGGTACAAAAGGAAAGCACAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: QIGLASKAWQVL*CLRYKRKAQGQ
Trigger: CTGGCCCTGTGCTTTCCTTTTGTACCTTAGGCAGCATAGCACCTGCCAGGCCTTAGAGGCCAGACCAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039156.7
CDS-3UTR TCA 90 bp GACCAGATTGGTCTGGCCTCTAAGGCCTGGCAGGTGCTATGCTGCCTAAGGTACTTCCTGTCCTGGCTCTaGTGGGAGATGCGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: DQIGLASKAWQVLCCLRYFLSWL*WEMRPP
Trigger: CGGCGGGCGCATCTCCCATCAGAGCCAGGACAGGAA...GTACCTTAGGCAGCATAGCACCTGCCAGGCCTTAGAGGCCAGACCAATCTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039156.7
CDS-3UTR TCA 90 bp GGGCCAGCCCCTCAAAACAGAACACAGCAAGAGCAGAGACCTGACTTAGTCCGGGAATCAGCACATACTTaGAGACGCCATCCGAATCAA +
Preference number: 4 (lower is better)
Translates to: GPAPQNRTQQEQRPDLVRESAHT*RRHPNQ
Trigger: TTGATTCGGATGGCGTCTTCAAGTATGTGCTGATTC...CCGGACTAAGTCAGGTCTCTGCTCTTGCTGTGTTCTGTTTTGAGGGGCTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039156.7
CDS-3UTR TCA 90 bp CAGATTGGTCTGGCCTCTAAGGCCTGGCAGGTGCTATGCTGCCTAAGGTACAAATTTGATCTTCTCAGTTaGAACAGAGTGCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: QIGLASKAWQVLCCLRYKFDLLS*NRVLGT
Trigger: CGTGCCCAGCACTCTGTTTCAACTGAGAAGATCAAA...TTTGTACCTTAGGCAGCATAGCACCTGCCAGGCCTTAGAGGCCAGACCAATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039156.7
CDS GCA 90 bp TGTCCGCGTGGTACTCAGCCCATTTGTAGCCACGCACGATTTCCTTaGACTCCTTCGCCGGATCCCCAGAAGGCTCTGCTAAGTGGACTC +
Preference number: 5 (lower is better)
Translates to: CPRGTQPICSHARFP*TPSPDPQKALLSGL
Trigger: GAGTCCACTTAGCAGAGCCTTCTGGGGATCCGGCGAAGGAGTGCAAGGAAATCGTGCGTGGCTACAAATGGGCTGAGTACCACGCGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039156.7
CDS CCA 90 bp ATTTCCTTGCACTCCTTCGCCGGATCCCCAGAAGGCTCTGCTAAGTaGACTCGAATCAGCACATACTTGAAGACGCCATCCGAATCAATG +
Preference number: 5 (lower is better)
Translates to: ISLHSFAGSPEGSAK*TRISTYLKTPSESM
Trigger: CATTGATTCGGATGGCGTCTTCAAGTATGTGCTGATTCGAGTCCACTTAGCAGAGCCTTCTGGGGATCCGGCGAAGGAGTGCAAGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039156.7
CDS-3UTR CAA 90 bp CAGATTGGTCTGGCCTCTAAGGCCTGGCAGGTGCTATGCTGCCTAAGGTACAAACGAATCAGCACATACTaGAAGACGCCATCCGAATCA +
Preference number: 5 (lower is better)
Translates to: QIGLASKAWQVLCCLRYKRISTY*KTPSES
Trigger: TGATTCGGATGGCGTCTTCAAGTATGTGCTGATTCG...TTTGTACCTTAGGCAGCATAGCACCTGCCAGGCCTTAGAGGCCAGACCAATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039156.7
CDS-3UTR CAA 90 bp TGGCAGGTGCTATGCTGCCTAAGGTACAAAAGGAAAGCACAGGGCCAGCCCCTCTCAGGATACTTGGCTTaGATCTTCTCAGTTGAAACA +
Preference number: 5 (lower is better)
Translates to: WQVLCCLRYKRKAQGQPLSGYLA*IFSVET
Trigger: TGTTTCAACTGAGAAGATCAAAGCCAAGTATCCTGA...GAGGGGCTGGCCCTGTGCTTTCCTTTTGTACCTTAGGCAGCATAGCACCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039156.7
CDS TCA 90 bp GATCCCCAGAAGGCTCTGCTAAGTGGACTCGAATCAGCACATACTTaGAGACGCCATCCGAATCAATGTCTACATCAGGAATCTGACCGA +
Preference number: 5 (lower is better)
Translates to: DPQKALLSGLESAHT*RRHPNQCLHQESDR
Trigger: TCGGTCAGATTCCTGATGTAGACATTGATTCGGATGGCGTCTTCAAGTATGTGCTGATTCGAGTCCACTTAGCAGAGCCTTCTGGGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039156.7
CDS GCA 72 bp GGTACTCAGCCCATTTGTAGCCACGCACGATTTCCTTaGACTCCTTCGCCGGATCCCCAGAAGGCTCTGCTA +
Preference number: 6 (lower is better)
Translates to: GTQPICSHARFP*TPSPDPQKALL
Trigger: TAGCAGAGCCTTCTGGGGATCCGGCGAAGGAGTGCAAGGAAATCGTGCGTGGCTACAAATGGGCTGAGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039156.7
CDS CCA 72 bp CACTCCTTCGCCGGATCCCCAGAAGGCTCTGCTAAGTaGACTCGAATCAGCACATACTTGAAGACGCCATCC +
Preference number: 6 (lower is better)
Translates to: HSFAGSPEGSAK*TRISTYLKTPS
Trigger: GGATGGCGTCTTCAAGTATGTGCTGATTCGAGTCCACTTAGCAGAGCCTTCTGGGGATCCGGCGAAGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039156.7
CDS CAA 72 bp GAAGGCTCTGCTAAGTGGACTCGAATCAGCACATACTaGAAGACGCCATCCGAATCAATGTCTACATCAGGA +
Preference number: 6 (lower is better)
Translates to: EGSAKWTRISTY*KTPSESMSTSG
Trigger: TCCTGATGTAGACATTGATTCGGATGGCGTCTTCAAGTATGTGCTGATTCGAGTCCACTTAGCAGAGCCTTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039156.7
CDS TCA 72 bp AAGGCTCTGCTAAGTGGACTCGAATCAGCACATACTTaGAGACGCCATCCGAATCAATGTCTACATCAGGAA +
Preference number: 6 (lower is better)
Translates to: KALLSGLESAHT*RRHPNQCLHQE
Trigger: TTCCTGATGTAGACATTGATTCGGATGGCGTCTTCAAGTATGTGCTGATTCGAGTCCACTTAGCAGAGCCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039156.7