Pregenerated sensors for PHOSPHO2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027088Ensembl transcript IDs: ENSMUST00000028494.9, ENSMUST00000112266.8, ENSMUST00000180290.2
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGCAGCGATGATCCAAGGCGTATATCCCCATGCTGGGCCCTCTTGGATGAAGGCCAGGACTACCTGGAATaGAAGCTGCATTTCCCATCT | + |
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Preference number: 2 (lower is better) Translates to: GSDDPRRISPCWALLDEGQDYLE*KLHFPS Trigger: AGATGGGAAATGCAGCTTTCATTCCAGGTAGTCCTG...GCCTTCATCCAAGAGGGCCCAGCATGGGGATATACGCCTTGGATCATCGCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAGCGATGATCCAAGGCGTATATCCCCATGCTGGGCCCTCTTGGATGAAGGCACTTGGGTCTCTTCATaGCTTGACATCAGGGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: GSDDPRRISPCWALLDEGTWVSS*LDIRGR Trigger: TCTTCCCCTGATGTCAAGTCATGAAGAGACCCAAGT...GCCTTCATCCAAGAGGGCCCAGCATGGGGATATACGCCTTGGATCATCGCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTCTTTTTCCTGGGCACAGGACTACCTGGAATGAAAGCTGCATTTCCCATGTTAGAAGCAGAAGCTaGGATTGGCTGAGCAACGAA | + |
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Preference number: 2 (lower is better) Translates to: FPLFPGHRTTWNESCISHVRSRS*DWLSNE Trigger: TTCGTTGCTCAGCCAATCTCAGCTTCTGCTTCTAAC...ATGGGAAATGCAGCTTTCATTCCAGGTAGTCCTGTGCCCAGGAAAAAGAGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTTGGCATCCTTAACACACCACAACCAAGTCTCTAGGGTTTTCTCTCTTTTTAGGCGTATATCCCCATaGTGGGCCCTCTTGGATGAA | + |
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Preference number: 2 (lower is better) Translates to: QLASLTHHNQVSRVFSLFRRISP*WALLDE Trigger: TTCATCCAAGAGGGCCCAGCATGGGGATATACGCCT...AAAAAGAGAGAAAACCCTAGAGACTTGGTTGTGGTGTGTTAAGGATGCCAACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTTGGCATCCTTAACACACCACAACCAAGTCTCTAGGGTTTTCTCTCTTTTTGGGCACAGGACTACCTaGAATGAAAGCTGCATTTCC | + |
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Preference number: 2 (lower is better) Translates to: QLASLTHHNQVSRVFSLFGHRTT*NESCIS Trigger: GGAAATGCAGCTTTCATTCCAGGTAGTCCTGTGCCC...AAAAAGAGAGAAAACCCTAGAGACTTGGTTGTGGTGTGTTAAGGATGCCAACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTTGGCATCCTTAACACACCACAACCAAGTCTCTAGGGTTTTCTCTCTTTTTGGTGAAGCTGAATCTTaGACACACTTGGGTCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: QLASLTHHNQVSRVFSLFGEAES*THLGLF Trigger: GAAGAGACCCAAGTGTGTTCAAGATTCAGCTTCACC...AAAAAGAGAGAAAACCCTAGAGACTTGGTTGTGGTGTGTTAAGGATGCCAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTTGGCATCCTTAACACACCACAACCAAGTCTCTAGGGTTTTCTCTCTTTTTAGTCCTAGCGGGTTGTaGGTGAAGCTGAATCTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: QLASLTHHNQVSRVFSLFSPSGL*VKLNLE Trigger: TTCAAGATTCAGCTTCACCCACAACCCGCTAGGACT...AAAAAGAGAGAAAACCCTAGAGACTTGGTTGTGGTGTGTTAAGGATGCCAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR CAA 90 bp | CCTATGGCCCTGATTCTTGCTGGTCACAATGTCTGTTGTGAGGACTaGAGCTTTAGATATCAATTTCAAATCACGGGGTTAGAAGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: PMALILAGHNVCCED*SFRYQFQITGLEAE Trigger: TTCTGCTTCTAACCCCGTGATTTGAAATTGATATCTAAAGCTCAAGTCCTCACAACAGACATTGTGACCAGCAAGAATCAGGGCCATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAACAATCTATTAACCATCCTTAGTATAGACTATGAGCTCCACATACCTCAAGGGCACAGGACTACCTaGAATGAAAGCTGCATTTCC | + |
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Preference number: 2 (lower is better) Translates to: QNNLLTILSIDYELHIPQGHRTT*NESCIS Trigger: GGAAATGCAGCTTTCATTCCAGGTAGTCCTGTGCCC...TTGAGGTATGTGGAGCTCATAGTCTATACTAAGGATGGTTAATAGATTGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAACAATCTATTAACCATCCTTAGTATAGACTATGAGCTCCACATACCTCAAACCTGGAATGAAAGCTaGATTTCCCATCTGTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: QNNLLTILSIDYELHIPQTWNES*ISHLCS Trigger: ACTGCACAGATGGGAAATGCAGCTTTCATTCCAGGT...TTGAGGTATGTGGAGCTCATAGTCTATACTAAGGATGGTTAATAGATTGTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR-3UTR CAA 90 bp | GGCAGCGATGATCCAAGGCGTATATCCCCATGCTGGGCCCTCTTGGATGAAGGCAAGCAGAAGCTGAGATaGGCTGAGCAACGAAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GSDDPRRISPCWALLDEGKQKLR*AEQRSG Trigger: GCCACTTCGTTGCTCAGCCAATCTCAGCTTCTGCTT...GCCTTCATCCAAGAGGGCCCAGCATGGGGATATACGCCTTGGATCATCGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR GCA 72 bp | GGCTTTGGCAGCGATGATCCAAGGCGTATATCCCCATaGTGGGCCCTCTTGGATGAAGGCAGTCTTCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: GFGSDDPRRISP*WALLDEGSLQC Trigger: GCACTGAAGACTGCCTTCATCCAAGAGGGCCCAGCATGGGGATATACGCCTTGGATCATCGCTGCCAAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR-3UTR CAA 90 bp | GGCAGCGATGATCCAAGGCGTATATCCCCATGCTGGGCCCTCTTGGATGAAGGCGGCTCTGACCAGGTTTaGGCTAGTGGTATTCAAACA | + |
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Preference number: 3 (lower is better) Translates to: GSDDPRRISPCWALLDEGGSDQV*ASGIQT Trigger: TGTTTGAATACCACTAGCCAAAACCTGGTCAGAGCC...GCCTTCATCCAAGAGGGCCCAGCATGGGGATATACGCCTTGGATCATCGCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR TCA 72 bp | GTTCAAGCATGCACTTGCCTAAGGCTTTGGCAGCGATaGTCCAAGGCGTATATCCCCATGCTGGGCCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VQACTCLRLWQR*SKAYIPMLGPL Trigger: AAGAGGGCCCAGCATGGGGATATACGCCTTGGATCATCGCTGCCAAAGCCTTAGGCAAGTGCATGCTTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTCTTTTTCCTGGGCACAGGACTACCTGGAATGAAAGCTGCATTTCCCATAAGCAGAAGCTGAGATaGGCTGAGCAACGAAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: FPLFPGHRTTWNESCISHKQKLR*AEQRSG Trigger: GCCACTTCGTTGCTCAGCCAATCTCAGCTTCTGCTT...ATGGGAAATGCAGCTTTCATTCCAGGTAGTCCTGTGCCCAGGAAAAAGAGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTCTTTTTCCTGGGCACAGGACTACCTGGAATGAAAGCTGCATTTCCCATGGCTCTGACCAGGTTTaGGCTAGTGGTATTCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: FPLFPGHRTTWNESCISHGSDQV*ASGIQT Trigger: TGTTTGAATACCACTAGCCAAAACCTGGTCAGAGCC...ATGGGAAATGCAGCTTTCATTCCAGGTAGTCCTGTGCCCAGGAAAAAGAGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR-3UTR CAA 90 bp | CAGTTGGCATCCTTAACACACCACAACCAAGTCTCTAGGGTTTTCTCTCTTTTTCTCAGTCCTAGCGGGTaGTGGGTGAAGCTGAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: QLASLTHHNQVSRVFSLFLSPSG*WVKLNL Trigger: AAGATTCAGCTTCACCCACAACCCGCTAGGACTGAG...AAAAAGAGAGAAAACCCTAGAGACTTGGTTGTGGTGTGTTAAGGATGCCAACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR TCA 72 bp | TTTTCCTCTTTTTCCTGGGCACAGGACTACCTGGAATaGAAGCTGCATTTCCCATCTGTGCAGTTAGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FSSFSWAQDYLE*KLHFPSVQLGK Trigger: CTTCCCTAACTGCACAGATGGGAAATGCAGCTTTCATTCCAGGTAGTCCTGTGCCCAGGAAAAAGAGGAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR CCA 72 bp | CCATCTGTGCAGTTAGGGAAGGCTCTGACCAGGTTTTaGCTAGTGGTATTCAAACAGAACTGTTTGGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: PSVQLGKALTRF*LVVFKQNCLVQ Trigger: TTGTACCAAACAGTTCTGTTTGAATACCACTAGCCAAAACCTGGTCAGAGCCTTCCCTAACTGCACAGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGCTGCATTTCCCATCTGTGCAGTTAGGGAAGGCTCTGACCAGGTTTTGGCTGTCTGTTGTGAGGACTaGAGCTTTAGATATCAATTT | + |
|
Preference number: 3 (lower is better) Translates to: KAAFPICAVREGSDQVLAVCCED*SFRYQF Trigger: AAATTGATATCTAAAGCTCAAGTCCTCACAACAGAC...AGCCAAAACCTGGTCAGAGCCTTCCCTAACTGCACAGATGGGAAATGCAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR-3UTR CAA 90 bp | CAGTTGGCATCCTTAACACACCACAACCAAGTCTCTAGGGTTTTCTCTCTTTTTGTCTGTTGTGAGGACTaGAGCTTTAGATATCAATTT | + |
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Preference number: 3 (lower is better) Translates to: QLASLTHHNQVSRVFSLFVCCED*SFRYQF Trigger: AAATTGATATCTAAAGCTCAAGTCCTCACAACAGAC...AAAAAGAGAGAAAACCCTAGAGACTTGGTTGTGGTGTGTTAAGGATGCCAACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAACAATCTATTAACCATCCTTAGTATAGACTATGAGCTCCACATACCTCAAGTCTGTTGTGAGGACTaGAGCTTTAGATATCAATTT | + |
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Preference number: 3 (lower is better) Translates to: QNNLLTILSIDYELHIPQVCCED*SFRYQF Trigger: AAATTGATATCTAAAGCTCAAGTCCTCACAACAGAC...TTGAGGTATGTGGAGCTCATAGTCTATACTAAGGATGGTTAATAGATTGTTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CCA 90 bp | GGCAGCGATGATCCAAGGCGTATATCCCCATGCTGGGCCCTCTTGGATGAAGGCGGGAAGCTTTTTGTCTaGAGCACACTGTACAATCCA | + |
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Preference number: 4 (lower is better) Translates to: GSDDPRRISPCWALLDEGGKLFV*STLYNP Trigger: TGGATTGTACAGTGTGCTCCAGACAAAAAGCTTCCC...GCCTTCATCCAAGAGGGCCCAGCATGGGGATATACGCCTTGGATCATCGCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR TCA 90 bp | GGCAGCGATGATCCAAGGCGTATATCCCCATGCTGGGCCCTCTTGGATGAAGGCCTAGAACCCAGTCTATaGAGATGGAATTTGAATCCG | + |
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Preference number: 4 (lower is better) Translates to: GSDDPRRISPCWALLDEGLEPSL*RWNLNP Trigger: CGGATTCAAATTCCATCTTCATAGACTGGGTTCTAG...GCCTTCATCCAAGAGGGCCCAGCATGGGGATATACGCCTTGGATCATCGCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CCA 90 bp | GGCAGCGATGATCCAAGGCGTATATCCCCATGCTGGGCCCTCTTGGATGAAGGCATCCTTCCCGTGGCATaGCAACATCATTTTTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: GSDDPRRISPCWALLDEGILPVA*QHHFSL Trigger: TAAAGAAAAATGATGTTGCCATGCCACGGGAAGGAT...GCCTTCATCCAAGAGGGCCCAGCATGGGGATATACGCCTTGGATCATCGCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CCA 90 bp | GGCAGCGATGATCCAAGGCGTATATCCCCATGCTGGGCCCTCTTGGATGAAGGCAGTATATCCTTCCCGTaGCATGGCAACATCATTTTT | + |
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Preference number: 4 (lower is better) Translates to: GSDDPRRISPCWALLDEGSISFP*HGNIIF Trigger: AAAAATGATGTTGCCATGCCACGGGAAGGATATACT...GCCTTCATCCAAGAGGGCCCAGCATGGGGATATACGCCTTGGATCATCGCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR TCA 90 bp | GGCAGCGATGATCCAAGGCGTATATCCCCATGCTGGGCCCTCTTGGATGAAGGCCACTGTTGTCGTCTATaGTTGTATTGTCAAAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: GSDDPRRISPCWALLDEGHCCRL*LYCQSQ Trigger: TTGACTTTGACAATACAATCATAGACGACAACAGTG...GCCTTCATCCAAGAGGGCCCAGCATGGGGATATACGCCTTGGATCATCGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR TCA 90 bp | GGCAGCGATGATCCAAGGCGTATATCCCCATGCTGGGCCCTCTTGGATGAAGGCATAGGCTCAAGATTTTaGGACATTTTGGCAAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: GSDDPRRISPCWALLDEGIGSRF*DILARV Trigger: AACTCTTGCCAAAATGTCTCAAAATCTTGAGCCTAT...GCCTTCATCCAAGAGGGCCCAGCATGGGGATATACGCCTTGGATCATCGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR TCA 90 bp | AAAGCTGCATTTCCCATCTGTGCAGTTAGGGAAGGCTCTGACCAGGTTTTGGCTTCATCCTCAGGAAGCTaGGAAGTTCTATCATCCCTG | + |
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Preference number: 4 (lower is better) Translates to: KAAFPICAVREGSDQVLASSSGS*EVLSSL Trigger: CAGGGATGATAGAACTTCTCAGCTTCCTGAGGATGA...AGCCAAAACCTGGTCAGAGCCTTCCCTAACTGCACAGATGGGAAATGCAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CCA 90 bp | CTTTTTCCTGGGCACAGGACTACCTGGAATGAAAGCTGCATTTCCCATCTGTGCGGGAAGCTTTTTGTCTaGAGCACACTGTACAATCCA | + |
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Preference number: 4 (lower is better) Translates to: LFPGHRTTWNESCISHLCGKLFV*STLYNP Trigger: TGGATTGTACAGTGTGCTCCAGACAAAAAGCTTCCC...GCACAGATGGGAAATGCAGCTTTCATTCCAGGTAGTCCTGTGCCCAGGAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR CAA 72 bp | CCCATCTGTGCAGTTAGGGAAGGCTCTGACCAGGTTTaGGCTAGTGGTATTCAAACAGAACTGTTTGGTACA | + |
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Preference number: 4 (lower is better) Translates to: PICAVREGSDQV*ASGIQTELFGT Trigger: TGTACCAAACAGTTCTGTTTGAATACCACTAGCCAAAACCTGGTCAGAGCCTTCCCTAACTGCACAGATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR TCA 90 bp | GCTGAGCAACGAAGTGGCCTTGACATACCACCAGAATTCTTTAAAGAGGAAAACTCATCCTCAGGAAGCTaGGAAGTTCTATCATCCCTG | + |
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Preference number: 4 (lower is better) Translates to: AEQRSGLDIPPEFFKEENSSSGS*EVLSSL Trigger: CAGGGATGATAGAACTTCTCAGCTTCCTGAGGATGA...GTTTTCCTCTTTAAAGAATTCTGGTGGTATGTCAAGGCCACTTCGTTGCTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR TCA 90 bp | AAAGCTGCATTTCCCATCTGTGCAGTTAGGGAAGGCTCTGACCAGGTTTTGGCTCACTGTTGTCGTCTATaGTTGTATTGTCAAAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: KAAFPICAVREGSDQVLAHCCRL*LYCQSQ Trigger: TTGACTTTGACAATACAATCATAGACGACAACAGTG...AGCCAAAACCTGGTCAGAGCCTTCCCTAACTGCACAGATGGGAAATGCAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR GCA 90 bp | AAAGCTGCATTTCCCATCTGTGCAGTTAGGGAAGGCTCTGACCAGGTTTTGGCTCCAAAACTGTATTTTTaGAAAGATTCTTTGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: KAAFPICAVREGSDQVLAPKLYF*KDSLGT Trigger: GGTGCCCAAAGAATCTTTGCAAAAATACAGTTTTGG...AGCCAAAACCTGGTCAGAGCCTTCCCTAACTGCACAGATGGGAAATGCAGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR GCA 90 bp | CTTTTTCCTGGGCACAGGACTACCTGGAATGAAAGCTGCATTTCCCATCTGTGCCCAAAACTGTATTTTTaGAAAGATTCTTTGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: LFPGHRTTWNESCISHLCPKLYF*KDSLGT Trigger: GGTGCCCAAAGAATCTTTGCAAAAATACAGTTTTGG...GCACAGATGGGAAATGCAGCTTTCATTCCAGGTAGTCCTGTGCCCAGGAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR TCA 90 bp | GCTGAGCAACGAAGTGGCCTTGACATACCACCAGAATTCTTTAAAGAGGAAAACCTAGAACCCAGTCTATaGAGATGGAATTTGAATCCG | + |
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Preference number: 4 (lower is better) Translates to: AEQRSGLDIPPEFFKEENLEPSL*RWNLNP Trigger: CGGATTCAAATTCCATCTTCATAGACTGGGTTCTAG...GTTTTCCTCTTTAAAGAATTCTGGTGGTATGTCAAGGCCACTTCGTTGCTCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CCA 90 bp | CAGTTGGCATCCTTAACACACCACAACCAAGTCTCTAGGGTTTTCTCTCTTTTTGGGAAGCTTTTTGTCTaGAGCACACTGTACAATCCA | + |
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Preference number: 4 (lower is better) Translates to: QLASLTHHNQVSRVFSLFGKLFV*STLYNP Trigger: TGGATTGTACAGTGTGCTCCAGACAAAAAGCTTCCC...AAAAAGAGAGAAAACCCTAGAGACTTGGTTGTGGTGTGTTAAGGATGCCAACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CCA 90 bp | TTTCCTCTTTTTCCTGGGCACAGGACTACCTGGAATGAAAGCTGCATTTCCCATAATCTTGTAGCTCAATaGGAAGCTTTTTGTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: FPLFPGHRTTWNESCISHNLVAQ*EAFCLE Trigger: CTCCAGACAAAAAGCTTCCCATTGAGCTACAAGATT...ATGGGAAATGCAGCTTTCATTCCAGGTAGTCCTGTGCCCAGGAAAAAGAGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CCA 90 bp | TTTCCTCTTTTTCCTGGGCACAGGACTACCTGGAATGAAAGCTGCATTTCCCATTTTGCAAAGATTCTTTaGGCACCTAGTGCAAGAATG | + |
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Preference number: 4 (lower is better) Translates to: FPLFPGHRTTWNESCISHFAKIL*APSARM Trigger: CATTCTTGCACTAGGTGCCCAAAGAATCTTTGCAAA...ATGGGAAATGCAGCTTTCATTCCAGGTAGTCCTGTGCCCAGGAAAAAGAGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR TCA 90 bp | TTTCCTCTTTTTCCTGGGCACAGGACTACCTGGAATGAAAGCTGCATTTCCCATCACTGTTGTCGTCTATaGTTGTATTGTCAAAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: FPLFPGHRTTWNESCISHHCCRL*LYCQSQ Trigger: TTGACTTTGACAATACAATCATAGACGACAACAGTG...ATGGGAAATGCAGCTTTCATTCCAGGTAGTCCTGTGCCCAGGAAAAAGAGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CCA 90 bp | GCTGAGCAACGAAGTGGCCTTGACATACCACCAGAATTCTTTAAAGAGGAAAACAATCTTGTAGCTCAATaGGAAGCTTTTTGTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: AEQRSGLDIPPEFFKEENNLVAQ*EAFCLE Trigger: CTCCAGACAAAAAGCTTCCCATTGAGCTACAAGATT...GTTTTCCTCTTTAAAGAATTCTGGTGGTATGTCAAGGCCACTTCGTTGCTCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CCA 90 bp | GCTGAGCAACGAAGTGGCCTTGACATACCACCAGAATTCTTTAAAGAGGAAAACATCCTTCCCGTGGCATaGCAACATCATTTTTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: AEQRSGLDIPPEFFKEENILPVA*QHHFSL Trigger: TAAAGAAAAATGATGTTGCCATGCCACGGGAAGGAT...GTTTTCCTCTTTAAAGAATTCTGGTGGTATGTCAAGGCCACTTCGTTGCTCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CCA 90 bp | GCTGAGCAACGAAGTGGCCTTGACATACCACCAGAATTCTTTAAAGAGGAAAACAGTATATCCTTCCCGTaGCATGGCAACATCATTTTT | + |
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Preference number: 4 (lower is better) Translates to: AEQRSGLDIPPEFFKEENSISFP*HGNIIF Trigger: AAAAATGATGTTGCCATGCCACGGGAAGGATATACT...GTTTTCCTCTTTAAAGAATTCTGGTGGTATGTCAAGGCCACTTCGTTGCTCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR TCA 90 bp | AGTTTTATGTTGCCGAGCCCAACCTCAACTAATACACCTTTCAATTGTTGGCATCTAGAACCCAGTCTATaGAGATGGAATTTGAATCCG | + |
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Preference number: 4 (lower is better) Translates to: SFMLPSPTSTNTPFNCWHLEPSL*RWNLNP Trigger: CGGATTCAAATTCCATCTTCATAGACTGGGTTCTAG...ATGCCAACAATTGAAAGGTGTATTAGTTGAGGTTGGGCTCGGCAACATAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR TCA 90 bp | GCTGAGCAACGAAGTGGCCTTGACATACCACCAGAATTCTTTAAAGAGGAAAACATAGGCTCAAGATTTTaGGACATTTTGGCAAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: AEQRSGLDIPPEFFKEENIGSRF*DILARV Trigger: AACTCTTGCCAAAATGTCTCAAAATCTTGAGCCTAT...GTTTTCCTCTTTAAAGAATTCTGGTGGTATGTCAAGGCCACTTCGTTGCTCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR GCA 90 bp | GCTGAGCAACGAAGTGGCCTTGACATACCACCAGAATTCTTTAAAGAGGAAAACCCAAAACTGTATTTTTaGAAAGATTCTTTGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: AEQRSGLDIPPEFFKEENPKLYF*KDSLGT Trigger: GGTGCCCAAAGAATCTTTGCAAAAATACAGTTTTGG...GTTTTCCTCTTTAAAGAATTCTGGTGGTATGTCAAGGCCACTTCGTTGCTCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CCA 90 bp | CAGTTGGCATCCTTAACACACCACAACCAAGTCTCTAGGGTTTTCTCTCTTTTTTTTGCAAAGATTCTTTaGGCACCTAGTGCAAGAATG | + |
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Preference number: 4 (lower is better) Translates to: QLASLTHHNQVSRVFSLFFAKIL*APSARM Trigger: CATTCTTGCACTAGGTGCCCAAAGAATCTTTGCAAA...AAAAAGAGAGAAAACCCTAGAGACTTGGTTGTGGTGTGTTAAGGATGCCAACTG 41% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR TCA 90 bp | CAGTTGGCATCCTTAACACACCACAACCAAGTCTCTAGGGTTTTCTCTCTTTTTATAGGCTCAAGATTTTaGGACATTTTGGCAAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: QLASLTHHNQVSRVFSLFIGSRF*DILARV Trigger: AACTCTTGCCAAAATGTCTCAAAATCTTGAGCCTAT...AAAAAGAGAGAAAACCCTAGAGACTTGGTTGTGGTGTGTTAAGGATGCCAACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| 3UTR CAA 72 bp | CTGATTCTTGCTGGTCACAATGTCTGTTGTGAGGACTaGAGCTTTAGATATCAATTTCAAATCACGGGGTTA | + |
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Preference number: 4 (lower is better) Translates to: LILAGHNVCCED*SFRYQFQITGL Trigger: TAACCCCGTGATTTGAAATTGATATCTAAAGCTCAAGTCCTCACAACAGACATTGTGACCAGCAAGAATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CCA 90 bp | CAAAACAATCTATTAACCATCCTTAGTATAGACTATGAGCTCCACATACCTCAATTTGCAAAGATTCTTTaGGCACCTAGTGCAAGAATG | + |
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Preference number: 4 (lower is better) Translates to: QNNLLTILSIDYELHIPQFAKIL*APSARM Trigger: CATTCTTGCACTAGGTGCCCAAAGAATCTTTGCAAA...TTGAGGTATGTGGAGCTCATAGTCTATACTAAGGATGGTTAATAGATTGTTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CAA 90 bp | GGCAGCGATGATCCAAGGCGTATATCCCCATGCTGGGCCCTCTTGGATGAAGGCTCAATGGGAAGCTTTTaGTCTGGAGCACACTGTACA | + |
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Preference number: 5 (lower is better) Translates to: GSDDPRRISPCWALLDEGSMGSF*SGAHCT Trigger: TGTACAGTGTGCTCCAGACAAAAAGCTTCCCATTGA...GCCTTCATCCAAGAGGGCCCAGCATGGGGATATACGCCTTGGATCATCGCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CAA 90 bp | GGCAGCGATGATCCAAGGCGTATATCCCCATGCTGGGCCCTCTTGGATGAAGGCATCCAGGTGTCACTGTaGTCGTCTATGATTGTATTG | + |
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Preference number: 5 (lower is better) Translates to: GSDDPRRISPCWALLDEGIQVSL*SSMIVL Trigger: CAATACAATCATAGACGACAACAGTGACACCTGGAT...GCCTTCATCCAAGAGGGCCCAGCATGGGGATATACGCCTTGGATCATCGCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CAA 90 bp | GGCAGCGATGATCCAAGGCGTATATCCCCATGCTGGGCCCTCTTGGATGAAGGCTCGTCTATGATTGTATaGTCAAAGTCAAACACCAAC | + |
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Preference number: 5 (lower is better) Translates to: GSDDPRRISPCWALLDEGSSMIV*SKSNTN Trigger: GTTGGTGTTTGACTTTGACAATACAATCATAGACGA...GCCTTCATCCAAGAGGGCCCAGCATGGGGATATACGCCTTGGATCATCGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CAA 90 bp | AAAGCTGCATTTCCCATCTGTGCAGTTAGGGAAGGCTCTGACCAGGTTTTGGCTATCCAGGTGTCACTGTaGTCGTCTATGATTGTATTG | + |
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Preference number: 5 (lower is better) Translates to: KAAFPICAVREGSDQVLAIQVSL*SSMIVL Trigger: CAATACAATCATAGACGACAACAGTGACACCTGGAT...AGCCAAAACCTGGTCAGAGCCTTCCCTAACTGCACAGATGGGAAATGCAGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CAA 90 bp | CTTTTTCCTGGGCACAGGACTACCTGGAATGAAAGCTGCATTTCCCATCTGTGCCATAGGCTCAAGATTTaGAGACATTTTGGCAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: LFPGHRTTWNESCISHLCHRLKI*RHFGKS Trigger: ACTCTTGCCAAAATGTCTCAAAATCTTGAGCCTATG...GCACAGATGGGAAATGCAGCTTTCATTCCAGGTAGTCCTGTGCCCAGGAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CAA 90 bp | AAAGCTGCATTTCCCATCTGTGCAGTTAGGGAAGGCTCTGACCAGGTTTTGGCTCATAGGCTCAAGATTTaGAGACATTTTGGCAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: KAAFPICAVREGSDQVLAHRLKI*RHFGKS Trigger: ACTCTTGCCAAAATGTCTCAAAATCTTGAGCCTATG...AGCCAAAACCTGGTCAGAGCCTTCCCTAACTGCACAGATGGGAAATGCAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CAA 90 bp | TTTCCTCTTTTTCCTGGGCACAGGACTACCTGGAATGAAAGCTGCATTTCCCATATCCAGGTGTCACTGTaGTCGTCTATGATTGTATTG | + |
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Preference number: 5 (lower is better) Translates to: FPLFPGHRTTWNESCISHIQVSL*SSMIVL Trigger: CAATACAATCATAGACGACAACAGTGACACCTGGAT...ATGGGAAATGCAGCTTTCATTCCAGGTAGTCCTGTGCCCAGGAAAAAGAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CAA 90 bp | TTTCCTCTTTTTCCTGGGCACAGGACTACCTGGAATGAAAGCTGCATTTCCCATCATAGGCTCAAGATTTaGAGACATTTTGGCAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: FPLFPGHRTTWNESCISHHRLKI*RHFGKS Trigger: ACTCTTGCCAAAATGTCTCAAAATCTTGAGCCTATG...ATGGGAAATGCAGCTTTCATTCCAGGTAGTCCTGTGCCCAGGAAAAAGAGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CAA 90 bp | AGTTTTATGTTGCCGAGCCCAACCTCAACTAATACACCTTTCAATTGTTGGCATTCAATGGGAAGCTTTTaGTCTGGAGCACACTGTACA | + |
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Preference number: 5 (lower is better) Translates to: SFMLPSPTSTNTPFNCWHSMGSF*SGAHCT Trigger: TGTACAGTGTGCTCCAGACAAAAAGCTTCCCATTGA...ATGCCAACAATTGAAAGGTGTATTAGTTGAGGTTGGGCTCGGCAACATAAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CAA 90 bp | GCTGAGCAACGAAGTGGCCTTGACATACCACCAGAATTCTTTAAAGAGGAAAACTCGTCTATGATTGTATaGTCAAAGTCAAACACCAAC | + |
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Preference number: 5 (lower is better) Translates to: AEQRSGLDIPPEFFKEENSSMIV*SKSNTN Trigger: GTTGGTGTTTGACTTTGACAATACAATCATAGACGA...GTTTTCCTCTTTAAAGAATTCTGGTGGTATGTCAAGGCCACTTCGTTGCTCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS-3UTR CAA 90 bp | CAAAACAATCTATTAACCATCCTTAGTATAGACTATGAGCTCCACATACCTCAATCAATGGGAAGCTTTTaGTCTGGAGCACACTGTACA | + |
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Preference number: 5 (lower is better) Translates to: QNNLLTILSIDYELHIPQSMGSF*SGAHCT Trigger: TGTACAGTGTGCTCCAGACAAAAAGCTTCCCATTGA...TTGAGGTATGTGGAGCTCATAGTCTATACTAAGGATGGTTAATAGATTGTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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| CDS TCA 90 bp | CCTGAAGACCAAACTACAATAGAAGATTCCATAGGCTCAAGATTTTaGGACATTTTGGCAAGAGTTCTATGTAAAGTATATCCTTCCCGT | + |
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Preference number: 5 (lower is better) Translates to: PEDQTTIEDSIGSRF*DILARVLCKVYPSR Trigger: ACGGGAAGGATATACTTTACATAGAACTCTTGCCAAAATGTCTCAAAATCTTGAGCCTATGGAATCTTCTATTGTAGTTTGGTCTTCAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028494.9 ENSMUST00000112266.8 ENSMUST00000180290.2 |
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