Pregenerated sensors for PHOSPHO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050860Ensembl transcript IDs: ENSMUST00000054173.4, ENSMUST00000176538.2
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | CAGGAACCCGTTCCTCTCAGTTCGAGGGGCACTGCCTaGCTTCCAAGGGGTGCTCACCTCCCTGGAGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: QEPVPLSSRGTA*LPRGAHLPGGK Trigger: CTTCCCTCCAGGGAGGTGAGCACCCCTTGGAAGGCAGGCAGTGCCCCTCGAACTGAGAGGAACGGGTTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054173.4 |
||
| 3UTR TCA 72 bp | GTACTGGCATGCGGATTGGGGGATCCTGAGTCCGTTTaGAAGACTGGGCAGAGGAGGTTATGCAGCCGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: VLACGLGDPESV*KTGQRRLCSRY Trigger: GTACCGGCTGCATAACCTCCTCTGCCCAGTCTTTCAAACGGACTCAGGATCCCCCAATCCGCATGCCAGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054173.4 |
||
| 3UTR TCA 72 bp | GAGGAATCTGGTACTGGCATGCGGATTGGGGGATCCTaGGTCCGTTTGAAAGACTGGGCAGAGGAGGTTATG | + |
|
Preference number: 3 (lower is better) Translates to: EESGTGMRIGGS*VRLKDWAEEVM Trigger: CATAACCTCCTCTGCCCAGTCTTTCAAACGGACTCAGGATCCCCCAATCCGCATGCCAGTACCAGATTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054173.4 |
||
| 3UTR TCA 72 bp | TTGGCTGAAGCAAGATCAAGACCTAGAGCTGTCTTCTaGGAGCATCATAGGTCTGCCGCGAGGAATCTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LAEARSRPRAVF*EHHRSAARNLV Trigger: TACCAGATTCCTCGCGGCAGACCTATGATGCTCTCAGAAGACAGCTCTAGGTCTTGATCTTGCTTCAGCCAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054173.4 |
||
| CDS-3UTR CCA 90 bp | CTAACCAATCCCCAGTCCCGTCCCTCCTCCGTCGGTTGTCCCGAGCACCCCTGGCAAATCGCCCATGCCTaGCGACAGGGGGATGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTNPQSRPSSVGCPEHPWQIAHA*RQGDGL Trigger: GAGACCATCCCCCTGTCGCCAGGCATGGGCGATTTG...CCAGGGGTGCTCGGGACAACCGACGGAGGAGGGACGGGACTGGGGATTGGTTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054173.4 |
||
| CDS-3UTR GCA 90 bp | TGCTCCCAGCCCACAAGCAGACTGAATTCCAGATATGCCCGGAGGAGCATAGCAAAGAGGCGCTCGAAGTaGACGCCGTCGCGGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CSQPTSRLNSRYARRSIAKRRSK*TPSRAR Trigger: GCGGGCCCGCGACGGCGTGCACTTCGAGCGCCTCTT...TGCTATGCTCCTCCGGGCATATCTGGAATTCAGTCTGCTTGTGGGCTGGGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054173.4 |
||
| CDS-3UTR CCA 90 bp | AGCGGTAGTGTAGGGTTGCGTTGGCTGAAGCAAGATCAAGACCTAGAGCTGTCTGAGCAGCTGTGCGTGTaGAAGGGCCGCAGCGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSVGLRWLKQDQDLELSEQLCV*KGRSVS Trigger: GCTGACGCTGCGGCCCTTCCACACGCACAGCTGCTC...AGACAGCTCTAGGTCTTGATCTTGCTTCAGCCAACGCAACCCTACACTACCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054173.4 |
||
| CDS-3UTR CCA 90 bp | AGCGGTAGTGTAGGGTTGCGTTGGCTGAAGCAAGATCAAGACCTAGAGCTGTCTGGGCGCGGAAGGAGCTaGGCTCAGCTTTCTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGSVGLRWLKQDQDLELSGRGRS*AQLSVP Trigger: AGGCACAGAAAGCTGAGCCCAGCTCCTTCCGCGCCC...AGACAGCTCTAGGTCTTGATCTTGCTTCAGCCAACGCAACCCTACACTACCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054173.4 |
||
| CDS-3UTR TCA 90 bp | GGTTCTTCTACCTCGTTCTACCAGCAGGAGGCGGTAGTTCCTTCTGACTTTTTCCATCGAAGTCGAAGGTaGGGAGGAAGCGAGGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GSSTSFYQQEAVVPSDFFHRSRR*GGSEAR Trigger: GCGCGCCTCGCTTCCTCCTCACCTTCGACTTCGATG...GAAAAAGTCAGAAGGAACTACCGCCTCCTGCTGGTAGAACGAGGTAGAAGAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054173.4 |
||
| CDS-3UTR TCA 90 bp | TCTTCTACCTCGTTCTACCAGCAGGAGGCGGTAGTTCCTTCTGACTTTTTCTTCGCCCCGACGGGTTGCTaGGGATGCGGCGGAATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSTSFYQQEAVVPSDFFFAPTGC*GCGGIN Trigger: GTTTATTCCGCCGCATCCTCAGCAACCCGTCGGGGC...GAAGAAAAAGTCAGAAGGAACTACCGCCTCCTGCTGGTAGAACGAGGTAGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054173.4 |
||
| CDS-3UTR GCA 90 bp | TCTTCTACCTCGTTCTACCAGCAGGAGGCGGTAGTTCCTTCTGACTTTTTCTTCGGGCTCAGCTTTCTGTaGCTCCTGGATGAGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSTSFYQQEAVVPSDFFFGLSFL*LLDEAV Trigger: CACCGCCTCATCCAGGAGGCACAGAAAGCTGAGCCC...GAAGAAAAAGTCAGAAGGAACTACCGCCTCCTGCTGGTAGAACGAGGTAGAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054173.4 |
||
| CDS-3UTR GCA 90 bp | TCTTCTACCTCGTTCTACCAGCAGGAGGCGGTAGTTCCTTCTGACTTTTTCTTCATCTTCAGCACCTGTTaGAGATGTTGGCGCACATCG | + |
|
Preference number: 4 (lower is better) Translates to: SSTSFYQQEAVVPSDFFFIFSTC*RCWRTS Trigger: CGATGTGCGCCAACATCTGCAACAGGTGCTGAAGAT...GAAGAAAAAGTCAGAAGGAACTACCGCCTCCTGCTGGTAGAACGAGGTAGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054173.4 |
||
| CDS TCA 90 bp | AGTCGTCGCTGTTCTCGTCCACGATGGTCTCATCGAAGTCGAAGGTaGGGAGGAAGCGAGGCGCGCCCGGCGCAGCCATCCTGCCGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SRRCSRPRWSHRSRR*GGSEARPAQPSCRP Trigger: GGGACGGCAGGATGGCTGCGCCGGGCGCGCCTCGCTTCCTCCTCACCTTCGACTTCGATGAGACCATCGTGGACGAGAACAGCGACGACT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054173.4 |
||
| CDS CCA 90 bp | GCAGGAGCCCTGTTTGGCTATGAACTGCAACAAATCGCCCATGCCTaGCGACAGGGGGATGGTCTCGTAGACAGCGCGCAGGTCCCGGNN | + |
|
Preference number: 5 (lower is better) Translates to: AGALFGYELQQIAHA*RQGDGLVDSAQVPX Trigger: NNCCGGGACCTGCGCGCTGTCTACGAGACCATCCCCCTGTCGCCAGGCATGGGCGATTTGTTGCAGTTCATAGCCAAACAGGGCTCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176538.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCGGAGGAGCATAGCAAAGCGAAAGGAAAGAGGAGGGTAGTAAAACTAGGTCAGGCTCTCGGGCAGTaGCTGGCCTGGCGCGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: CPEEHSKAKGKRRVVKLGQALGQ*LAWRGT Trigger: CGTGCCGCGCCAGGCCAGCAACTGCCCGAGAGCCTG...ACCTAGTTTTACTACCCTCCTCTTTCCTTTCGCTTTGCTATGCTCCTCCGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054173.4 |
||
| CDS-3UTR CAA 90 bp | GTTCCTTCTCCCAACTTCCAGGAACCCGTTCCTCTCAGTTCGAGGGGCACTGCCAAGCAGGAGCCCTGTTaGGCTATGAACTGCAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: VPSPNFQEPVPLSSRGTAKQEPC*AMNCNK Trigger: TTTGTTGCAGTTCATAGCCAAACAGGGCTCCTGCTT...GGCAGTGCCCCTCGAACTGAGAGGAACGGGTTCCTGGAAGTTGGGAGAAGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054173.4 |
||