RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHLPP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031732

Ensembl transcript IDs: ENSMUST00000034175.5, ENSMUST00000179721.8

Found 476 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTGCTGTCTCCCAGCAACGCTGGGAGTCCAACCAAGGTCCAATGTaGAGCTTAACACTGATGGCGGTCCGAGCCCATCAAGAGCCAGAC +
Preference number: 1 (lower is better)
Translates to: SAVSQQRWESNQGPM*SLTLMAVRAHQEPD
Trigger: GTCTGGCTCTTGATGGGCTCGGACCGCCATCAGTGTTAAGCTTCACATTGGACCTTGGTTGGACTCCCAGCGTTGCTGGGAGACAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR TCA 90 bp GCGAATGCTGACTGGCTGATCACCAATGACGGAACACAGCAGATGTaGCGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTC +
Preference number: 1 (lower is better)
Translates to: ANADWLITNDGTQQM*RSRFSQSGEYLPNL
Trigger: GAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGCTGTGTTCCGTCATTGGTGATCAGCCAGTCAGCATTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR GCA 90 bp GCCAAGTCTACCACATTAAGGAAAAGAGGCAAACCCACAAGTCCCTaGCTTGGGATCCTAGTTCCTAGCAGGGGTCAGCTTATCCAAGGC +
Preference number: 1 (lower is better)
Translates to: AKSTTLRKRGKPTSP*LGILVPSRGQLIQG
Trigger: GCCTTGGATAAGCTGACCCCTGCTAGGAACTAGGATCCCAAGGCAGGGACTTGTGGGTTTGCCTCTTTTCCTTAATGTGGTAGACTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 90 bp TGTAAGAAGGAACCTGTCCTCTGGCCACCTGGAGAATGTACCCTCTaGGTACGGGAAAGGAATCACACTCACCTGACAGCCTACTCAGAT +
Preference number: 1 (lower is better)
Translates to: CKKEPVLWPPGECTL*VRERNHTHLTAYSD
Trigger: ATCTGAGTAGGCTGTCAGGTGAGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGACAGGTTCCTTCTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR TCA 90 bp CAGACTGGATTTGAACTCTCTGTAGCCAAGGCTAACCCTCATCCCTaGTTCTCCTGCTTTAACCTCCCATGTGCGTGCAGATTTGCAGGT +
Preference number: 1 (lower is better)
Translates to: QTGFELSVAKANPHP*FSCFNLPCACRFAG
Trigger: ACCTGCAAATCTGCACGCACATGGGAGGTTAAAGCAGGAGAATCAGGGATGAGGGTTAGCCTTGGCTACAGAGAGTTCAAATCCAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR GCA 90 bp ACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAACAGCCGAGTaGTCTTTCTTCAGAAATCCTGTTTGTTTGGTTTTGAGGCTGGGA +
Preference number: 1 (lower is better)
Translates to: TLSASELPEPHPTAE*SFFRNPVCLVLRLG
Trigger: TCCCAGCCTCAAAACCAAACAAACAGGATTTCTGAAGAAAGAGCACTCGGCTGTTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 90 bp AGCGGCACGGGACAGTTCTACAGTGATGCTGCACACATCACCGGATaGCTTGGAGACGGGTTCTTTAGCAATTGGTACATTATCAGTAAC +
Preference number: 1 (lower is better)
Translates to: SGTGQFYSDAAHITG*LGDGFFSNWYIISN
Trigger: GTTACTGATAATGTACCAATTGCTAAAGAACCCGTCTCCAAGCCATCCGGTGATGTGTGCAGCATCACTGTAGAACTGTCCCGTGCCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 90 bp AACATTGTCATTTCCAGTTATCTGTCACTGGGTAAAAACCTTGACTaGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACC +
Preference number: 1 (lower is better)
Translates to: NIVISSYLSLGKNLD*GHRHSLPVSFLNHT
Trigger: GGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAGGTTTTTACCCAGTGACAGATAACTGGAAATGACAATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 90 bp GTCAAGCCTCGCTTGTGTCGGGAGTGGCCAGGGATGACTCCATGGTaGCACCACACTTTATTTCCTATCAACATTGTCATTTCCAGTTAT +
Preference number: 1 (lower is better)
Translates to: VKPRLCREWPGMTPW*HHTLFPINIVISSY
Trigger: ATAACTGGAAATGACAATGTTGATAGGAAATAAAGTGTGGTGCCACCATGGAGTCATCCCTGGCCACTCCCGACACAAGCGAGGCTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 90 bp ATAGTCAAGCCTCGCTTGTGTCGGGAGTGGCCAGGGATGACTCCATaGTGGCACCACACTTTATTTCCTATCAACATTGTCATTTCCAGT +
Preference number: 1 (lower is better)
Translates to: IVKPRLCREWPGMTP*WHHTLFPINIVISS
Trigger: ACTGGAAATGACAATGTTGATAGGAAATAAAGTGTGGTGCCACCATGGAGTCATCCCTGGCCACTCCCGACACAAGCGAGGCTTGACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 90 bp ACACCTGGCCTCAGAGATTTGTTTAAATTAACTGAACGGGAGATGTaGGCAGAGACCAAGAATCATATAGAGGGAGGGCAGGCTCTGTGT +
Preference number: 1 (lower is better)
Translates to: TPGLRDLFKLTEREM*AETKNHIEGGQALC
Trigger: ACACAGAGCCTGCCCTCCCTCTATATGATTCTTGGTCTCTGCCCACATCTCCCGTTCAGTTAATTTAAACAAATCTCTGAGGCCAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR TCA 90 bp GTACCTGCTTTTGCTGAAGGTCTACACAGAAAGAAGAGCACTGTTTaGTACTCACAAGTTCAGCCCAACCTAACTGCCTGGAAACAGCAC +
Preference number: 1 (lower is better)
Translates to: VPAFAEGLHRKKSTV*YSQVQPNLTAWKQH
Trigger: GTGCTGTTTCCAGGCAGTTAGGTTGGGCTGAACTTGTGAGTATCAAACAGTGCTCTTCTTTCTGTGTAGACCTTCAGCAAAAGCAGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR GCA 90 bp CATGTCACCATGTCAGGGGACTCAGCAATATTCAGAAGGGCACAGTaGCAAACAACACACTCACTACAACATTCTAGAAAACATCCTGAG +
Preference number: 1 (lower is better)
Translates to: HVTMSGDSAIFRRAQ*QTTHSLQHSRKHPE
Trigger: CTCAGGATGTTTTCTAGAATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGTCCCCTGACATGGTGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR TCA 90 bp AACAGCCAAGTGCTCCCTTATGGAGGTCTCTTTGTTAATAATTACTaGATAGATAGAGAAGGTGAGCCTGTGGTTTCCAAGTACCTGCTT +
Preference number: 1 (lower is better)
Translates to: NSQVLPYGGLFVNNY*IDREGEPVVSKYLL
Trigger: AAGCAGGTACTTGGAAACCACAGGCTCACCTTCTCTATCTATTCAGTAATTATTAACAAAGAGACCTCCATAAGGGAGCACTTGGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 90 bp CTAGTGCTCAACTTTTTGGCTCCAAATTCTACTCCATATTATCTATaGTTTGAAACACTGAGGCAAATATCTCCTGAAGGTCCCTTCCCC +
Preference number: 1 (lower is better)
Translates to: LVLNFLAPNSTPYYL*FETLRQISPEGPFP
Trigger: GGGGAAGGGACCTTCAGGAGATATTTGCCTCAGTGTTTCAAACCATAGATAATATGGAGTAGAATTTGGAGCCAAAAAGTTGAGCACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 90 bp GTGCTCTCGTTACACAACATTACATACATAAGTCACCTGCTTGATTaGTTCTGTATCTCCAGTAGACATTTGATAGGCTGTATTCTCCTA +
Preference number: 1 (lower is better)
Translates to: VLSLHNITYISHLLD*FCISSRHLIGCILL
Trigger: TAGGAGAATACAGCCTATCAAATGTCTACTGGAGATACAGAACCAATCAAGCAGGTGACTTATGTATGTAATGTTGTGTAACGAGAGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGGAGTGGCCAGGGATaGCTCCATGGTGGCACCACA +
Preference number: 2 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRGSGQG*LHGGTT
Trigger: TGTGGTGCCACCATGGAGTCATCCCTGGCCACTCCC...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR GCA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCAGGGAACACAAGGTGGTaGCATGGTCTCTCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPGNTRW*HGLSSL
Trigger: CAGGGAGGAGAGACCATGGCACCACCTTGTGTTCCC...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAAGCTCAAAGGCTCTGCTaGGCAGGAGGCTCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQAQRLC*AGGSLQ
Trigger: CTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGC...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGGACAGTTCTACAGTaGTGCTGCACACATCACCGG +
Preference number: 2 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRGTVLQ*CCTHHR
Trigger: CCGGTGATGTGTGCAGCATCACTGTAGAACTGTCCC...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR GCA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCGGGAACACAAGGTGGTaGCATGGTCTCTCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: SGRGARERVRHRERMLTGGNTRW*HGLSSL
Trigger: CAGGGAGGAGAGACCATGGCACCACCTTGTGTTCCC...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp GTCCTCTGGCCACCTGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTGGCAGGTGGCAGGACTaGCACAGAACATCTGCTGTC +
Preference number: 2 (lower is better)
Translates to: VLWPPGECTLWVRERNHTGRWQD*HRTSAV
Trigger: GACAGCAGATGTTCTGTGTCAGTCCTGCCACCTGCC...AGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR GCA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAAAAGGAAGCTGAGTGTTaGCGACTTGGGGGCTCACGT +
Preference number: 2 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQKEAEC*RLGGSR
Trigger: ACGTGAGCCCCCAAGTCGGCAACACTCAGCTTCCTT...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR GCA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCAAGGAAGCTGAGTGTTaGCGACTTGGGGGCTCACGT +
Preference number: 2 (lower is better)
Translates to: SGRGARERVRHRERMLTGKEAEC*RLGGSR
Trigger: ACGTGAGCCCCCAAGTCGGCAACACTCAGCTTCCTT...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR GCA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAAGAGCAGGAGGCTCTCTaGAGCATCCTCACCTTGTGT +
Preference number: 2 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQEQEAL*SILTLC
Trigger: ACACAAGGTGAGGATGCTGCAGAGAGCCTCCTGCTC...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CCA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAACACAAGGTGGTGCCATaGTCTCTCCTCCCTGCAGTA +
Preference number: 2 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQHKVVP*SLLPAV
Trigger: TACTGCAGGGAGGAGAGACCATGGCACCACCTTGTG...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCACATAAGTCACCTGCTTaGTTGGTTCTGTATCTCCAG +
Preference number: 2 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPHKSPA*LVLYLQ
Trigger: CTGGAGATACAGAACCAATCAAGCAGGTGACTTATG...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGTTTCTTCCTCTGTGTTaGGGCCAGCACTTTGAACCA +
Preference number: 2 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRFLPLC*GQHFEP
Trigger: TGGTTCAAAGTGCTGGCCTCAACACAGAGGAAGAAA...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCACTGTTTGTTTGGTTTTaGGGCTGGGACTCATGTATA +
Preference number: 2 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPLFVWF*GWDSCI
Trigger: TATACATGAGTCCCAGCCTCAAAACCAAACAAACAG...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGAGTACCTGCTTTTGCTaGAGGTCTACACAGAAAGAA +
Preference number: 2 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRSTCFC*RSTQKE
Trigger: TTCTTTCTGTGTAGACCTTCAGCAAAAGCAGGTACT...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CCA 90 bp TGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTCACCTGACAGCCTACACAAGGTGGTGCCATaGTCTCTCCTCCCTGCAGTA +
Preference number: 2 (lower is better)
Translates to: WRMYPLGTGKESHSPDSLHKVVP*SLLPAV
Trigger: TACTGCAGGGAGGAGAGACCATGGCACCACCTTGTG...TAGGCTGTCAGGTGAGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CCA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCGAGAAGGTGAGCCTGTaGTTTCCAAGTACCTGCTTT +
Preference number: 2 (lower is better)
Translates to: SGRGARERVRHRERMLTGEKVSL*FPSTCF
Trigger: AAAGCAGGTACTTGGAAACCACAGGCTCACCTTCTC...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCAGCAAGTCTAACTTGTaGGATCTGGCTGCCCATATA +
Preference number: 2 (lower is better)
Translates to: SGRGARERVRHRERMLTGSKSNL*DLAAHI
Trigger: TATATGGGCAGCCAGATCTCACAAGTTAGACTTGCT...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR GCA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCTTCAGAAGGGCACAGTaGCAAACAACACACTCACTA +
Preference number: 2 (lower is better)
Translates to: LVLQLKGSAEQEALCSILFRRAQ*QTTHSL
Trigger: TAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAA...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCAAGGTTCACAGTCAATaGAAAGTGCTCTCGTTACAC +
Preference number: 2 (lower is better)
Translates to: LVLQLKGSAEQEALCSILKVHSQ*KVLSLH
Trigger: GTGTAACGAGAGCACTTTTCATTGACTGTGAACCTT...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp ACCACTAACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTTGAGGCCAGCACTTTaGACCATGTCACCATGTCAG +
Preference number: 2 (lower is better)
Translates to: TTNPVHMSTGPLRTELSVLRPAL*TMSPCQ
Trigger: CTGACATGGTGACATGGTTCAAAGTGCTGGCCTCAA...GACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTTAGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp ACCACACCCAACAGCCGAGTGCTCTTTCTTCAGAAATCCTGTTTGTTTGGTTTTGCTCAAAGGCTCTGCTaGGCAGGAGGCTCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: TTPNSRVLFLQKSCLFGFAQRLC*AGGSLQ
Trigger: CTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGC...AAAACCAAACAAACAGGATTTCTGAAGAAAGAGCACTCGGCTGTTGGGTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR GCA 90 bp TTCTGTCCACCAGGGATTGAGTTCACTGATTATTGCACGTGTATACTCCACAGTAGCCCTCCCTCAGGCTaGGTCCACACGAGAGGTACA +
Preference number: 2 (lower is better)
Translates to: FCPPGIEFTDYCTCILHSSPPSG*VHTRGT
Trigger: TGTACCTCTCGTGTGGACGCAGCCTGAGGGAGGGCT...ACTGTGGAGTATACACGTGCAATAATCAGTGAACTCAATCCCTGGTGGACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR GCA 90 bp GACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATAGCCCTCCCTCAGGCTaGGTCCACACGAGAGGTACA +
Preference number: 2 (lower is better)
Translates to: DSAIFRRAQCQTTHSLQHSPPSG*VHTRGT
Trigger: TGTACCTCTCGTGTGGACGCAGCCTGAGGGAGGGCT...ATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR GCA 90 bp TTCTGTCCACCAGGGATTGAGTTCACTGATTATTGCACGTGTATACTCCACAGTAGGTGTGAGCCACTGTaGCACCACACCTGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: FCPPGIEFTDYCTCILHSRCEPL*HHTWPQ
Trigger: CTGAGGCCAGGTGTGGTGGCACAGTGGCTCACACCT...ACTGTGGAGTATACACGTGCAATAATCAGTGAACTCAATCCCTGGTGGACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CAA 90 bp GCACGGGACAGTTCTACAGTGATGCTGCACACATCACCGGATGGCTaGGAGACGGGTTCTTTAGCAATTGGTACATTATCAGTAACAGCC +
Preference number: 2 (lower is better)
Translates to: ARDSSTVMLHTSPDG*ETGSLAIGTLSVTA
Trigger: GGCTGTTACTGATAATGTACCAATTGCTAAAGAACCCGTCTCCAAGCCATCCGGTGATGTGTGCAGCATCACTGTAGAACTGTCCCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCTATGGTTTGAAACACTaGGGCAAATATCTCCTGAAG +
Preference number: 2 (lower is better)
Translates to: SGRGARERVRHRERMLTGYGLKH*GKYLLK
Trigger: CTTCAGGAGATATTTGCCTCAGTGTTTCAAACCATA...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp TGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTCACCTGACAGCCTATGGTTTGGCCTACACTaGGGTTTCTCAACACAACCT +
Preference number: 2 (lower is better)
Translates to: WRMYPLGTGKESHSPDSLWFGLH*GFSTQP
Trigger: AGGTTGTGTTGAGAAACCTCAGTGTAGGCCAAACCA...TAGGCTGTCAGGTGAGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CAA 90 bp TTTGCAGGTGTGAGCCACTGTGCCACCACACCTGGCCTCAGAGATTaGTTTAAATTAACTGAACGGGAGATGTGGGCAGAGACCAAGAAT +
Preference number: 2 (lower is better)
Translates to: FAGVSHCATTPGLRD*FKLTEREMWAETKN
Trigger: ATTCTTGGTCTCTGCCCACATCTCCCGTTCAGTTAATTTAAACAAATCTCTGAGGCCAGGTGTGGTGGCACAGTGGCTCACACCTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp ACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATTGGCAGGTGGCAGGACTaGCACAGAACATCTGCTGTC +
Preference number: 2 (lower is better)
Translates to: TQQYSEGHSAKQHTHYNIGRWQD*HRTSAV
Trigger: GACAGCAGATGTTCTGTGTCAGTCCTGCCACCTGCC...AATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CCA 90 bp GTCCTCTGGCCACCTGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTCATATAAAAATAAGGTaGGAACACAAGGTGGTGCCA +
Preference number: 2 (lower is better)
Translates to: VLWPPGECTLWVRERNHTHIKIR*EHKVVP
Trigger: TGGCACCACCTTGTGTTCCCACCTTATTTTTATATG...AGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CCA 90 bp ACCACACCCAACAGCCGAGTGCTCTTTCTTCAGAAATCCTGTTTGTTTGGTTTTTGTCCTCTGGCCACCTaGAGAATGTACCCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: TTPNSRVLFLQKSCLFGFCPLAT*RMYPLG
Trigger: ACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGACA...AAAACCAAACAAACAGGATTTCTGAAGAAAGAGCACTCGGCTGTTGGGTGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CAA 90 bp CTTGTGAGATCTGGCTGCCCATATATGTTCCTAGCTGGTCTCCTGTaGTACTCACTTGCTATAATTCAAGGAGTCAGCCCACCTGTCAAG +
Preference number: 2 (lower is better)
Translates to: LVRSGCPYMFLAGLL*YSLAIIQGVSPPVK
Trigger: CTTGACAGGTGGGCTGACTCCTTGAATTATAGCAAGTGAGTACAACAGGAGACCAGCTAGGAACATATATGGGCAGCCAGATCTCACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR GCA 90 bp TTCTGTCCACCAGGGATTGAGTTCACTGATTATTGCACGTGTATACTCCACAGTATGTGCGTGCAGATTTaGAGGTGTGAGCCACTGTGC +
Preference number: 2 (lower is better)
Translates to: FCPPGIEFTDYCTCILHSMCVQI*RCEPLC
Trigger: GCACAGTGGCTCACACCTGCAAATCTGCACGCACAT...ACTGTGGAGTATACACGTGCAATAATCAGTGAACTCAATCCCTGGTGGACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CAA 90 bp CGGTCCGAGCCCATCAAGAGCCAGACCCTGCTAGTGCTCAACTTTTaGGCTCCAAATTCTACTCCATATTATCTATGGTTTGAAACACTG +
Preference number: 2 (lower is better)
Translates to: RSEPIKSQTLLVLNF*APNSTPYYLWFETL
Trigger: CAGTGTTTCAAACCATAGATAATATGGAGTAGAATTTGGAGCCAAAAAGTTGAGCACTAGCAGGGTCTGGCTCTTGATGGGCTCGGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CCA 90 bp AACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTGCTTTAGTCACCTGCTTGATTaGTTCTGTATCTCCAGTAGA +
Preference number: 2 (lower is better)
Translates to: NPVHMSTGPLRTELSVCFSHLLD*FCISSR
Trigger: TCTACTGGAGATACAGAACCAATCAAGCAGGTGACT...AAAGCAGACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CCA 90 bp GAGAGGGGAGCAAGTCTAACTTGTGAGATCTGGCTGCCCATATATGTTCCTAGCAGTCACCTGCTTGATTaGTTCTGTATCTCCAGTAGA +
Preference number: 2 (lower is better)
Translates to: ERGASLTCEIWLPIYVPSSHLLD*FCISSR
Trigger: TCTACTGGAGATACAGAACCAATCAAGCAGGTGACT...GCTAGGAACATATATGGGCAGCCAGATCTCACAAGTTAGACTTGCTCCCCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CCA 90 bp TTCTGTCCACCAGGGATTGAGTTCACTGATTATTGCACGTGTATACTCCACAGTGGAGAATGTACCCTCTaGGTACGGGAAAGGAATCAC +
Preference number: 2 (lower is better)
Translates to: FCPPGIEFTDYCTCILHSGECTL*VRERNH
Trigger: GTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCC...ACTGTGGAGTATACACGTGCAATAATCAGTGAACTCAATCCCTGGTGGACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp TTGCCGACTTGGGGGCTCACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCAAGGCTGAGTCTCTTTaGCTTGACTTAGTTCTCACT +
Preference number: 2 (lower is better)
Translates to: LPTWGLTFRFLRTELLGSKAESL*LDLVLT
Trigger: AGTGAGAACTAAGTCAAGTCAAAGAGACTCAGCCTT...GCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAGCCCCCAAGTCGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CCA 90 bp ACCACTAACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCACTCCATATTATCTATaGTTTGAAACACTGAGGCAA +
Preference number: 2 (lower is better)
Translates to: TTNPVHMSTGPLRTELSVTPYYL*FETLRQ
Trigger: TTGCCTCAGTGTTTCAAACCATAGATAATATGGAGT...GACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTTAGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp GACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATAAGGTTCACAGTCAATaGAAAGTGCTCTCGTTACAC +
Preference number: 2 (lower is better)
Translates to: DSAIFRRAQCQTTHSLQHKVHSQ*KVLSLH
Trigger: GTGTAACGAGAGCACTTTTCATTGACTGTGAACCTT...ATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CCA 90 bp GAGAGGGGAGCAAGTCTAACTTGTGAGATCTGGCTGCCCATATATGTTCCTAGCACTCCATATTATCTATaGTTTGAAACACTGAGGCAA +
Preference number: 2 (lower is better)
Translates to: ERGASLTCEIWLPIYVPSTPYYL*FETLRQ
Trigger: TTGCCTCAGTGTTTCAAACCATAGATAATATGGAGT...GCTAGGAACATATATGGGCAGCCAGATCTCACAAGTTAGACTTGCTCCCCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATAAGGCTGAGTCTCTTTaGCTTGACTTAGTTCTCACT +
Preference number: 2 (lower is better)
Translates to: QITSLLQEACITFWEMDYKAESL*LDLVLT
Trigger: AGTGAGAACTAAGTCAAGTCAAAGAGACTCAGCCTT...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp ATAAGTCACCTGCTTGATTGGTTCTGTATCTCCAGTAGACATTTGATAGGCTGTTATGGTTTGAAACACTaGGGCAAATATCTCCTGAAG +
Preference number: 2 (lower is better)
Translates to: ISHLLDWFCISSRHLIGCYGLKH*GKYLLK
Trigger: CTTCAGGAGATATTTGCCTCAGTGTTTCAAACCATA...ACAGCCTATCAAATGTCTACTGGAGATACAGAACCAATCAAGCAGGTGACTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CCA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATATATATGTTCCTAGCTaGTCTCCTGTTGTACTCACT +
Preference number: 2 (lower is better)
Translates to: QITSLLQEACITFWEMDYIYVPS*SPVVLT
Trigger: AGTGAGTACAACAGGAGACCAGCTAGGAACATATAT...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR GCA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATAAGATTGGCTCCGAGTaGAGATTCAAAAATAAAAGG +
Preference number: 2 (lower is better)
Translates to: QITSLLQEACITFWEMDYKIGSE*RFKNKR
Trigger: CCTTTTATTTTTGAATCTGCACTCGGAGCCAATCTT...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAACATATAAAAATAAGGTaGGAACACAAGGTGGTGCCA +
Preference number: 2 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQHIKIR*EHKVVP
Trigger: TGGCACCACCTTGTGTTCCCACCTTATTTTTATATG...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR TCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAAAGCACATTTTTCAACTaGGTAAAATCAAGCAATGCC +
Preference number: 2 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQSTFFN*VKSSNA
Trigger: GGCATTGCTTGATTTTACTCAGTTGAAAAATGTGCT...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR GCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAAAAGATTGGCTCCGAGTaGAGATTCAAAAATAAAAGG +
Preference number: 2 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQKIGSE*RFKNKR
Trigger: CCTTTTATTTTTGAATCTGCACTCGGAGCCAATCTT...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR GCA 72 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTaGCCAACCTCGGGGCCAAGTTACTACCTGGAGAGA +
Preference number: 3 (lower is better)
Translates to: CDAAASLSLGST*PTSGPSYYLER
Trigger: TCTCTCCAGGTAGTAACTTGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR TCA 72 bp AAGGGAAGTGAAGAGCGGCACGGGACAGTTCTACAGTaGTGCTGCACACATCACCGGATGGCTTGGAGACGG +
Preference number: 3 (lower is better)
Translates to: KGSEERHGTVLQ*CCTHHRMAWRR
Trigger: CCGTCTCCAAGCCATCCGGTGATGTGTGCAGCATCACTGTAGAACTGTCCCGTGCCGCTCTTCACTTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 72 bp GAACCTGTCCTCTGGCCACCTGGAGAATGTACCCTCTaGGTACGGGAAAGGAATCACACTCACCTGACAGCC +
Preference number: 3 (lower is better)
Translates to: EPVLWPPGECTL*VRERNHTHLTA
Trigger: GGCTGTCAGGTGAGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGACAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CAA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCACCTGTTTGTTTGGTTTaGAGGCTGGGACTCATGTAT +
Preference number: 3 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPPVCLV*RLGLMY
Trigger: ATACATGAGTCCCAGCCTCAAAACCAAACAAACAGG...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR TCA 72 bp CCTCCCAAGCACCCTCAAAGAGGCTCCAATGCTCAATaGCTTCTACCTAGGGACAAAGGAGCTGGGCTGCCT +
Preference number: 3 (lower is better)
Translates to: PPKHPQRGSNAQ*LLPRDKGAGLP
Trigger: AGGCAGCCCAGCTCCTTTGTCCCTAGGTAGAAGTCATTGAGCATTGGAGCCTCTTTGAGGGTGCTTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR TCA 72 bp GCTTTAACCTCCCATGTGCGTGCAGATTTGCAGGTGTaGGCCACTGTGCCACCACACCTGGCCTCAGAGATT +
Preference number: 3 (lower is better)
Translates to: ALTSHVRADLQV*ATVPPHLASEI
Trigger: AATCTCTGAGGCCAGGTGTGGTGGCACAGTGGCTCACACCTGCAAATCTGCACGCACATGGGAGGTTAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR TCA 72 bp GACTGGCTGATCACCAATGACGGAACACAGCAGATGTaGCGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTG +
Preference number: 3 (lower is better)
Translates to: DWLITNDGTQQM*RSRFSQSGEYL
Trigger: CAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGCTGTGTTCCGTCATTGGTGATCAGCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CAA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAACTGCCTCTAAGAAGATaGGCTCCGAGTGCAGATTCA +
Preference number: 3 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQLPLRR*APSADS
Trigger: TGAATCTGCACTCGGAGCCAATCTTCTTAGAGGCAG...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 72 bp GGAGTACTTGCCCAACCTCGGGGCCAAGTTACTACCTaGAGAGAAAGATTAGCCTGCCATGGGGAGTCGAAA +
Preference number: 3 (lower is better)
Translates to: GVLAQPRGQVTT*RERLACHGESK
Trigger: TTTCGACTCCCCATGGCAGGCTAATCTTTCTCTCCAGGTAGTAACTTGGCCCCGAGGTTGGGCAAGTACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CAA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCTGCAGCATCCTCACCTaGTGTTTTTCCTTCACTCTC +
Preference number: 3 (lower is better)
Translates to: SGRGARERVRHRERMLTGCSILT*CFSFTL
Trigger: GAGAGTGAAGGAAAAACACAAGGTGAGGATGCTGCA...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR GCA 72 bp CAAGGAGTCAGCCCACCTGTCAAGAGGCTGGCTAGCTaGCAAGTCTACCACATTAAGGAAAAGAGGCAAACC +
Preference number: 3 (lower is better)
Translates to: QGVSPPVKRLAS*QVYHIKEKRQT
Trigger: GGTTTGCCTCTTTTCCTTAATGTGGTAGACTTGGCAGCTAGCCAGCCTCTTGACAGGTGGGCTGACTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 72 bp CCTCGCTTGTGTCGGGAGTGGCCAGGGATGACTCCATaGTGGCACCACACTTTATTTCCTATCAACATTGTC +
Preference number: 3 (lower is better)
Translates to: PRLCREWPGMTP*WHHTLFPINIV
Trigger: GACAATGTTGATAGGAAATAAAGTGTGGTGCCACCATGGAGTCATCCCTGGCCACTCCCGACACAAGCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CAA 90 bp GTCCTCTGGCCACCTGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTTGCAGCATCCTCACCTaGTGTTTTTCCTTCACTCTC +
Preference number: 3 (lower is better)
Translates to: VLWPPGECTLWVRERNHTCSILT*CFSFTL
Trigger: GAGAGTGAAGGAAAAACACAAGGTGAGGATGCTGCA...AGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CAA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAAAGAAATCCTGTTTGTTaGGTTTTGAGGCTGGGACTC +
Preference number: 3 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQRNPVC*VLRLGL
Trigger: GAGTCCCAGCCTCAAAACCAAACAAACAGGATTTCT...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CAA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCCTAGCTGGTCTCCTGTaGTACTCACTTGCTATAATT +
Preference number: 3 (lower is better)
Translates to: SGRGARERVRHRERMLTGLAGLL*YSLAII
Trigger: AATTATAGCAAGTGAGTACAACAGGAGACCAGCTAG...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CAA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCACAAGAAGTGGTCACTaGCTAGAGTTAAGAGGAATG +
Preference number: 3 (lower is better)
Translates to: SGRGARERVRHRERMLTGTRSGH*LELRGM
Trigger: CATTCCTCTTAACTCTAGCAAGTGACCACTTCTTGT...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR GCA 72 bp ACCACATTAAGGAAAAGAGGCAAACCCACAAGTCCCTaGCTTGGGATCCTAGTTCCTAGCAGGGGTCAGCTT +
Preference number: 3 (lower is better)
Translates to: TTLRKRGKPTSP*LGILVPSRGQL
Trigger: AAGCTGACCCCTGCTAGGAACTAGGATCCCAAGGCAGGGACTTGTGGGTTTGCCTCTTTTCCTTAATGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CAA 90 bp TGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTCACCTGACAGCCTAGGCGTGTATTACGTTTaGGGAAATGGACTATGGCCT +
Preference number: 3 (lower is better)
Translates to: WRMYPLGTGKESHSPDSLGVYYV*GNGLWP
Trigger: AGGCCATAGTCCATTTCCCAAAACGTAATACACGCC...TAGGCTGTCAGGTGAGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR TCA 72 bp TTTGAACTCTCTGTAGCCAAGGCTAACCCTCATCCCTaGTTCTCCTGCTTTAACCTCCCATGTGCGTGCAGA +
Preference number: 3 (lower is better)
Translates to: FELSVAKANPHP*FSCFNLPCACR
Trigger: TCTGCACGCACATGGGAGGTTAAAGCAGGAGAATCAGGGATGAGGGTTAGCCTTGGCTACAGAGAGTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR GCA 72 bp ACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCTaGTGCAGTGATAGAGCATCCTCCACCCCACCCCAC +
Preference number: 3 (lower is better)
Translates to: TFRFLRTELLGS*CSDRASSTPPH
Trigger: GTGGGGTGGGGTGGAGGATGCTCTATCACTGCAGCAGCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 72 bp GAGAGAGAGAGGGGAGCAAGTCTAACTTGTGAGATCTaGCTGCCCATATATGTTCCTAGCTGGTCTCCTGTT +
Preference number: 3 (lower is better)
Translates to: ERERGASLTCEI*LPIYVPSWSPV
Trigger: AACAGGAGACCAGCTAGGAACATATATGGGCAGCCAGATCTCACAAGTTAGACTTGCTCCCCTCTCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 72 bp CGCTTGTGTCGGGAGTGGCCAGGGATGACTCCATGGTaGCACCACACTTTATTTCCTATCAACATTGTCATT +
Preference number: 3 (lower is better)
Translates to: RLCREWPGMTPW*HHTLFPINIVI
Trigger: AATGACAATGTTGATAGGAAATAAAGTGTGGTGCCACCATGGAGTCATCCCTGGCCACTCCCGACACAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR TCA 72 bp CTAGCAGGGGTCAGCTTATCCAAGGCTGAGTCTCTTTaGCTTGACTTAGTTCTCACTCCTCCCCCATCTTAT +
Preference number: 3 (lower is better)
Translates to: LAGVSLSKAESL*LDLVLTPPPSY
Trigger: ATAAGATGGGGGAGGAGTGAGAACTAAGTCAAGTCAAAGAGACTCAGCCTTGGATAAGCTGACCCCTGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 72 bp GGACAGTTCTACAGTGATGCTGCACACATCACCGGATaGCTTGGAGACGGGTTCTTTAGCAATTGGTACATT +
Preference number: 3 (lower is better)
Translates to: GQFYSDAAHITG*LGDGFFSNWYI
Trigger: AATGTACCAATTGCTAAAGAACCCGTCTCCAAGCCATCCGGTGATGTGTGCAGCATCACTGTAGAACTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CAA 90 bp TGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTCACCTGACAGCCTACTCACGTTCAGATTCTaGAGAACTGAATTATTAGGC +
Preference number: 3 (lower is better)
Translates to: WRMYPLGTGKESHSPDSLLTFRF*RTELLG
Trigger: GCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAG...TAGGCTGTCAGGTGAGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR TCA 72 bp GTACCCTCTGGGTACGGGAAAGGAATCACACTCACCTaGCAGCCTACTCAGATAAAAACATCAGCAAATCAC +
Preference number: 3 (lower is better)
Translates to: VPSGYGKGITLT*QPTQIKTSANH
Trigger: GTGATTTGCTGATGTTTTTATCTGAGTAGGCTGTCAGGTGAGTGTGATTCCTTTCCCGTACCCAGAGGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR GCA 72 bp CACTGTTTGATACTCACAAGTTCAGCCCAACCTAACTaGCTGGAAACAGCACTCGTGAAACGCACTGTGATA +
Preference number: 3 (lower is better)
Translates to: HCLILTSSAQPN*LETALVKRTVI
Trigger: TATCACAGTGCGTTTCACGAGTGCTGTTTCCAGGCAGTTAGGTTGGGCTGAACTTGTGAGTATCAAACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CAA 90 bp TTGCCGACTTGGGGGCTCACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCCTAGTGCTCAACTTTTaGGCTCCAAATTCTACTCCA +
Preference number: 3 (lower is better)
Translates to: LPTWGLTFRFLRTELLGSLVLNF*APNSTP
Trigger: TGGAGTAGAATTTGGAGCCAAAAAGTTGAGCACTAG...GCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAGCCCCCAAGTCGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CAA 90 bp TTGCCGACTTGGGGGCTCACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCACAAGAAGTGGTCACTaGCTAGAGTTAAGAGGAATG +
Preference number: 3 (lower is better)
Translates to: LPTWGLTFRFLRTELLGSTRSGH*LELRGM
Trigger: CATTCCTCTTAACTCTAGCAAGTGACCACTTCTTGT...GCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAGCCCCCAAGTCGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CAA 90 bp TTCTGTCCACCAGGGATTGAGTTCACTGATTATTGCACGTGTATACTCCACAGTGGCGTGTATTACGTTTaGGGAAATGGACTATGGCCT +
Preference number: 3 (lower is better)
Translates to: FCPPGIEFTDYCTCILHSGVYYV*GNGLWP
Trigger: AGGCCATAGTCCATTTCCCAAAACGTAATACACGCC...ACTGTGGAGTATACACGTGCAATAATCAGTGAACTCAATCCCTGGTGGACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR TCA 72 bp TTTGCTGAAGGTCTACACAGAAAGAAGAGCACTGTTTaGTACTCACAAGTTCAGCCCAACCTAACTGCCTGG +
Preference number: 3 (lower is better)
Translates to: FAEGLHRKKSTV*YSQVQPNLTAW
Trigger: CCAGGCAGTTAGGTTGGGCTGAACTTGTGAGTATCAAACAGTGCTCTTCTTTCTGTGTAGACCTTCAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 72 bp CATATAAAAATAAGGTGGGAACACAAGGTGGTGCCATaGTCTCTCCTCCCTGCAGTACACCTACAATCTGTA +
Preference number: 3 (lower is better)
Translates to: HIKIRWEHKVVP*SLLPAVHLQSV
Trigger: TACAGATTGTAGGTGTACTGCAGGGAGGAGAGACCATGGCACCACCTTGTGTTCCCACCTTATTTTTATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 72 bp ATCACCGGATGGCTTGGAGACGGGTTCTTTAGCAATTaGTACATTATCAGTAACAGCCAAGTGCTCCCTTAT +
Preference number: 3 (lower is better)
Translates to: ITGWLGDGFFSN*YIISNSQVLPY
Trigger: ATAAGGGAGCACTTGGCTGTTACTGATAATGTACCAATTGCTAAAGAACCCGTCTCCAAGCCATCCGGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CAA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATCTGCCTCTAAGAAGATaGGCTCCGAGTGCAGATTCA +
Preference number: 3 (lower is better)
Translates to: QITSLLQEACITFWEMDYLPLRR*APSADS
Trigger: TGAATCTGCACTCGGAGCCAATCTTCTTAGAGGCAG...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR TCA 72 bp AAGGTGAGCCTGTGGTTTCCAAGTACCTGCTTTTGCTaGAGGTCTACACAGAAAGAAGAGCACTGTTTGATA +
Preference number: 3 (lower is better)
Translates to: KVSLWFPSTCFC*RSTQKEEHCLI
Trigger: TATCAAACAGTGCTCTTCTTTCTGTGTAGACCTTCAGCAAAAGCAGGTACTTGGAAACCACAGGCTCACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR GCA 72 bp AGGAGCTGGGCTGCCTCTAAGAAGATTGGCTCCGAGTaGAGATTCAAAAATAAAAGGTTCACAGTCAATGAA +
Preference number: 3 (lower is better)
Translates to: RSWAASKKIGSE*RFKNKRFTVNE
Trigger: TTCATTGACTGTGAACCTTTTATTTTTGAATCTGCACTCGGAGCCAATCTTCTTAGAGGCAGCCCAGCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR GCA 72 bp ATATATGTTCCTAGCTGGTCTCCTGTTGTACTCACTTaGTATAATTCAAGGAGTCAGCCCACCTGTCAAGAG +
Preference number: 3 (lower is better)
Translates to: IYVPSWSPVVLT*YNSRSQPTCQE
Trigger: CTCTTGACAGGTGGGCTGACTCCTTGAATTATAGCAAGTGAGTACAACAGGAGACCAGCTAGGAACATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR GCA 72 bp CTCTTCTGTCCACCAGGGATTGAGTTCACTGATTATTaGACGTGTATACTCCACAGTAGTATAGTCAAGCCT +
Preference number: 3 (lower is better)
Translates to: LFCPPGIEFTDY*TCILHSSIVKP
Trigger: AGGCTTGACTATACTACTGTGGAGTATACACGTGCAATAATCAGTGAACTCAATCCCTGGTGGACAGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 72 bp ACTTGTGAGATCTGGCTGCCCATATATGTTCCTAGCTaGTCTCCTGTTGTACTCACTTGCTATAATTCAAGG +
Preference number: 3 (lower is better)
Translates to: TCEIWLPIYVPS*SPVVLTCYNSR
Trigger: CCTTGAATTATAGCAAGTGAGTACAACAGGAGACCAGCTAGGAACATATATGGGCAGCCAGATCTCACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 72 bp CTCAGAGATTTGTTTAAATTAACTGAACGGGAGATGTaGGCAGAGACCAAGAATCATATAGAGGGAGGGCAG +
Preference number: 3 (lower is better)
Translates to: LRDLFKLTEREM*AETKNHIEGGQ
Trigger: CTGCCCTCCCTCTATATGATTCTTGGTCTCTGCCCACATCTCCCGTTCAGTTAATTTAAACAAATCTCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 72 bp TTCCTATCAACATTGTCATTTCCAGTTATCTGTCACTaGGTAAAAACCTTGACTGGGGCCACAGACACTCTC +
Preference number: 3 (lower is better)
Translates to: FLSTLSFPVICH*VKTLTGATDTL
Trigger: GAGAGTGTCTGTGGCCCCAGTCAAGGTTTTTACCCAGTGACAGATAACTGGAAATGACAATGTTGATAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CAA 90 bp ACCACACCCAACAGCCGAGTGCTCTTTCTTCAGAAATCCTGTTTGTTTGGTTTTCTAGTGCTCAACTTTTaGGCTCCAAATTCTACTCCA +
Preference number: 3 (lower is better)
Translates to: TTPNSRVLFLQKSCLFGFLVLNF*APNSTP
Trigger: TGGAGTAGAATTTGGAGCCAAAAAGTTGAGCACTAG...AAAACCAAACAAACAGGATTTCTGAAGAAAGAGCACTCGGCTGTTGGGTGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CAA 90 bp ACCACACCCAACAGCCGAGTGCTCTTTCTTCAGAAATCCTGTTTGTTTGGTTTTCCTGGCCTCAGAGATTaGTTTAAATTAACTGAACGG +
Preference number: 3 (lower is better)
Translates to: TTPNSRVLFLQKSCLFGFPGLRD*FKLTER
Trigger: CCGTTCAGTTAATTTAAACAAATCTCTGAGGCCAGG...AAAACCAAACAAACAGGATTTCTGAAGAAAGAGCACTCGGCTGTTGGGTGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR GCA 72 bp ATGTCAGGGGACTCAGCAATATTCAGAAGGGCACAGTaGCAAACAACACACTCACTACAACATTCTAGAAAA +
Preference number: 3 (lower is better)
Translates to: MSGDSAIFRRAQ*QTTHSLQHSRK
Trigger: TTTTCTAGAATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGTCCCCTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 72 bp ATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTaGGAAATGGACTATGGCCTTTTAACCCTCTGTTTT +
Preference number: 3 (lower is better)
Translates to: ITSLLQEACITF*EMDYGLLTLCF
Trigger: AAAACAGAGGGTTAAAAGGCCATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR-3UTR CAA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATTTAGCAATCGCTCAGTaGAATAGTCTTTCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: QITSLLQEACITFWEMDYLAIAQ*NSLSSS
Trigger: AGAGGAAGAAAGACTATTCAACTGAGCGATTGCTAA...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR TCA 72 bp CAAATTCTACTCCATATTATCTATGGTTTGAAACACTaGGGCAAATATCTCCTGAAGGTCCCTTCCCCAATA +
Preference number: 3 (lower is better)
Translates to: QILLHIIYGLKH*GKYLLKVPSPI
Trigger: TATTGGGGAAGGGACCTTCAGGAGATATTTGCCTCAGTGTTTCAAACCATAGATAATATGGAGTAGAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CCA 72 bp TTACACAACATTACATACATAAGTCACCTGCTTGATTaGTTCTGTATCTCCAGTAGACATTTGATAGGCTGT +
Preference number: 3 (lower is better)
Translates to: LHNITYISHLLD*FCISSRHLIGC
Trigger: ACAGCCTATCAAATGTCTACTGGAGATACAGAACCAATCAAGCAGGTGACTTATGTATGTAATGTTGTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR GCA 72 bp TCTTTAGCAATTGGTACATTATCAGTAACAGCCAAGTaGTCCCTTATGGAGGTCTCTTTGTTAATAATTACT +
Preference number: 3 (lower is better)
Translates to: SLAIGTLSVTAK*SLMEVSLLIIT
Trigger: AGTAATTATTAACAAAGAGACCTCCATAAGGGAGCACTTGGCTGTTACTGATAATGTACCAATTGCTAAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCAACTGCAGCGCCTCTCTaGCCTGGGCAGCAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPTAAPL*PGQQAR
Trigger: GCGAGCTTGCTGCCCAGGCCAGAGAGGCGCTGCAGT...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCACGGAGGGGAGCTCTCTaGCTCTCTGCCTCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPRRGAL*LSASAA
Trigger: TGCTGCCGAGGCAGAGAGCCAGAGAGCTCCCCTCCG...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGAGCGCCTCTCTGGCCTaGGCAGCAAGCTCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRSASLA*AASSPP
Trigger: TGGAGGCGAGCTTGCTGCCCAGGCCAGAGAGGCGCT...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCAGTCAGCTCCCTCAGCTaGTTCCGCTCACAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPVSSLS*FRSQCS
Trigger: GCTGCACTGTGAGCGGAACCAGCTGAGGGAGCTGAC...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCATCAGGCCTGCCCTCCTaGTGCTGCTTCATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPSGLPS*CCFICS
Trigger: GGAGCAGATGAAGCAGCACCAGGAGGGCAGGCCTGA...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGCTCATCCTGGTCAGTaGCCCCAGGTTCAGGACCTC +
Preference number: 4 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRAHPGQ*PQVQDL
Trigger: GAGGTCCTGAACCTGGGGGCACTGACCAGGATGAGC...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAAGCTCGGGCTCAGGCCTaGCCTCCTGGTGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQARAQA*PPGAAS
Trigger: TGAAGCAGCACCAGGAGGGCAGGCCTGAGCCCGAGC...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCAAGGGCTCCAGTCTCCTaGCCAGATCTCCATGAAGCT +
Preference number: 4 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPRAPVS*PDLHEA
Trigger: AGCTTCATGGAGATCTGGTCAGGAGACTGGAGCCCT...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCACTGAAAGCAAGGGAGTaGTGCCGGCGCTTCACTTCT +
Preference number: 4 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPLKARE*CRRFTS
Trigger: AGAAGTGAAGCGCCGGCAGCACTCCCTTGCTTTCAG...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCACGGCACAGGACAGCTTaGCACATGCCAACATTGGCT +
Preference number: 4 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPRHRTA*HMPTLA
Trigger: AGCCAATGTTGGCATGTGCCAAGCTGTCCTGTGCCG...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCAAGGCAATCCCACTACTaGAGGAGGGAGTGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPRQSHY*RREWLA
Trigger: AGCCAACCACTCCCTCCTCCAGTAGTGGGATTGCCT...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GTCCTCTGGCCACCTGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTGGGCTCCAGCTGAGCTaGAAGCAAGGGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: VLWPPGECTLWVRERNHTGLQLS*KQGSAA
Trigger: GGCAGCACTCCCTTGCTTTCAGCTCAGCTGGAGCCC...AGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCGGCCTGCCCTCCTGGTaGTGCTTCATCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LVLQLKGSAEQEALCSILGLPSW*CFICSF
Trigger: GAAGGAGCAGATGAAGCAGCACCAGGAGGGCAGGCC...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGCTGATGTTGTTGGCATaGGCGACAAGGGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRLMLLA*ATRVCS
Trigger: GCTGCACACCCTTGTCGCCCATGCCAACAACATCAG...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGAGGAGGGAGTGGTTaGCTTGGGAGTATCCTTGAG +
Preference number: 4 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRGGGSG*LGSILE
Trigger: CTCAAGGATACTCCCAAGCCAACCACTCCCTCCTCC...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGACAAACTGATCCTCTaGTTCCAGCTGAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRDKLIL*FQLSGG
Trigger: GCCCCCACTCAGCTGGAACCAGAGGATCAGTTTGTC...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGTTCACTGCTCACCTCTaGGGTGGACATCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRFTAHL*GGHLTA
Trigger: AGCAGTGAGATGTCCACCTCAGAGGTGAGCAGTGAA...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAAACAGTGCTCATCCGCTaGGACACCACCTTAGACGCC +
Preference number: 4 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQTVLIR*DTTLDA
Trigger: GGCGTCTAAGGTGGTGTCGCAGCGGATGAGCACTGT...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAAACCTCGAGGGGAATGTaGTCCACCAGTGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQTSRGM*STSAGR
Trigger: CCTTCCTGCACTGGTGGAGCACATTCCCCTCGAGGT...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCAGCCTCCTCTGGGTCATaGTCCAAGCTGAAGACTTTA +
Preference number: 4 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPASSGS*SKLKTL
Trigger: TAAAGTCTTCAGCTTGGAGCATGACCCAGAGGAGGC...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGCTAAAGCTACTTGTTaGGTCGGCAGTGTCAGGTCG +
Preference number: 4 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRAKATC*VGSVRS
Trigger: CGACCTGACACTGCCGACCCAACAAGTAGCTTTAGC...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGAAGCTATGTGGGGCTTaGGGAGGATCCATGGGTAGA +
Preference number: 4 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRKLCGA*GGSMGR
Trigger: TCTACCCATGGATCCTCCCCAAGCCCCACATAGCTT...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTCACCTGACAGCCTACGGAGGGGAGCTCTCTaGCTCTCTGCCTCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: WRMYPLGTGKESHSPDSLRRGAL*LSASAA
Trigger: TGCTGCCGAGGCAGAGAGCCAGAGAGCTCCCCTCCG...TAGGCTGTCAGGTGAGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp ACCACTAACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCGGGCTCCAGCTGAGCTaGAAGCAAGGGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TTNPVHMSTGPLRTELSVGLQLS*KQGSAA
Trigger: GGCAGCACTCCCTTGCTTTCAGCTCAGCTGGAGCCC...GACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTTAGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GTCCTCTGGCCACCTGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTAGCTTGGGCTCCAGCTaGGCTGAAAGCAAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: VLWPPGECTLWVRERNHTSLGSS*AESKGV
Trigger: CACTCCCTTGCTTTCAGCTCAGCTGGAGCCCAAGCT...AGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCAGGAAGGACATGGATGTaGTTGTGTCCTACCATCAGT +
Preference number: 4 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPGRTWM*LCPTIS
Trigger: ACTGATGGTAGGACACAATCACATCCATGTCCTTCC...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCCTGTGGCCACCTCAATaGGGTTCAGGCTGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: SGRGARERVRHRERMLTGLWPPQ*GSGCPL
Trigger: TAGAGGACAGCCTGAACCTCATTGAGGTGGCCACAG...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAACTGAAAGCAAGGGAGTaGTGCCGGCGCTTCACTTCT +
Preference number: 4 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQLKARE*CRRFTS
Trigger: AGAAGTGAAGCGCCGGCAGCACTCCCTTGCTTTCAG...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAATTTATTCCTCTGCCCTaGCATCTCGGCCAGGCCATG +
Preference number: 4 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQFIPLP*HLGQAM
Trigger: CATGGCCTGGCCGAGATGGCAGGGCAGAGGAATAAA...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp AACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTGCTTTGCTCGGGCTCAGGCCTaGCCTCCTGGTGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: NPVHMSTGPLRTELSVCFARAQA*PPGAAS
Trigger: TGAAGCAGCACCAGGAGGGCAGGCCTGAGCCCGAGC...AAAGCAGACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCATGCAGAGTCTGTGGCTaGCAAAGGCTTCTGATCAAT +
Preference number: 4 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPCRVCG*QRLLIN
Trigger: ATTGATCAGAAGCCTTTGCCAGCCACAGACTCTGCA...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCCTTGGGGAGGATCCATaGGTAGAGGTATGTGCACCC +
Preference number: 4 (lower is better)
Translates to: LVLQLKGSAEQEALCSILLGEDP*VEVCAP
Trigger: GGGTGCACATACCTCTACCCATGGATCCTCCCCAAG...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCGGAGGAGGGAGTGGTTaGCTTGGGAGTATCCTTGAG +
Preference number: 4 (lower is better)
Translates to: SGRGARERVRHRERMLTGGGGSG*LGSILE
Trigger: CTCAAGGATACTCCCAAGCCAACCACTCCCTCCTCC...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp GAGAGGGGAGCAAGTCTAACTTGTGAGATCTGGCTGCCCATATATGTTCCTAGCAGCGCCTCTCTGGCCTaGGCAGCAAGCTCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ERGASLTCEIWLPIYVPSSASLA*AASSPP
Trigger: TGGAGGCGAGCTTGCTGCCCAGGCCAGAGAGGCGCT...GCTAGGAACATATATGGGCAGCCAGATCTCACAAGTTAGACTTGCTCCCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp GAGAGGGGAGCAAGTCTAACTTGTGAGATCTGGCTGCCCATATATGTTCCTAGCACTGCAGCGCCTCTCTaGCCTGGGCAGCAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: ERGASLTCEIWLPIYVPSTAAPL*PGQQAR
Trigger: GCGAGCTTGCTGCCCAGGCCAGAGAGGCGCTGCAGT...GCTAGGAACATATATGGGCAGCCAGATCTCACAAGTTAGACTTGCTCCCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCAAATTCCCAGAGAAGTaGGCTGCCGCAGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: LVLQLKGSAEQEALCSILKFPEK*AAAGFP
Trigger: TGGGAAACCTGCGGCAGCTCACTTCTCTGGGAATTT...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp ACCACTAACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCGAAGGGAGAAGCCGCTaGGTGTCAGCTCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TTNPVHMSTGPLRTELSVEGRSR*VSAPSA
Trigger: AGCTGAGGGAGCTGACACTCAGCGGCTTCTCCCTTC...GACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTTAGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAAAGTGGGTCTTGCACGTaGCGTACTGCATTGACAGCT +
Preference number: 4 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQSGSCT*RTALTA
Trigger: AGCTGTCAATGCAGTACGTCACGTGCAAGACCCACT...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAAGCTTGGGAGTATCCTTaGGGGCTGCAGTTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQAWEYP*GLQLKQ
Trigger: TTGCTTCAACTGCAGCCCTCAAGGATACTCCCAAGC...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GTCCTCTGGCCACCTGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTTGGACATCTCACTGCTaGACTCGGAGGCAATCCCAC +
Preference number: 4 (lower is better)
Translates to: VLWPPGECTLWVRERNHTWTSHC*TRRQSH
Trigger: GTGGGATTGCCTCCGAGTTCAGCAGTGAGATGTCCA...AGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCCCTGGTCTTTCTAGCTaGATGAAGTTGTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SGRGARERVRHRERMLTGPGLSS*MKLCRR
Trigger: CCTGCGGCACAACTTCATGCAGCTAGAAAGACCAGG...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAACTGGAGCTGGTTGTTTaGAAGGTGCAGAACTCGCAG +
Preference number: 4 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQLELVV*KVQNSQ
Trigger: CTGCGAGTTCTGCACCTTGCAAACAACCAGCTCCAG...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCGGGTGTGCAGCCTTTTaGAGTTGGCTATGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SGRGARERVRHRERMLTGGCAAF*SWLWLW
Trigger: CCACAACCATAGCCAACTGCAAAAGGCTGCACACCC...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGCAAATAAACCACCATTaGCCCCACGTTGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRQINHH*PHVVLT
Trigger: TGTCAGGACAACGTGGGGGCAATGGTGGTTTATTTG...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCAATCACCGTTTTCAAGTaGTTCATCCTCAGATCCACG +
Preference number: 4 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPITVFK*FILRST
Trigger: CGTGGATCTGAGGATGAACCACTTGAAAACGGTGAT...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTCACCTGACAGCCTAGTCAGCTCCCTCAGCTaGTTCCGCTCACAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: WRMYPLGTGKESHSPDSLVSSLS*FRSQCS
Trigger: GCTGCACTGTGAGCGGAACCAGCTGAGGGAGCTGAC...TAGGCTGTCAGGTGAGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp GTCCTCTGGCCACCTGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTCTGATGTTGTTGGCATaGGCGACAAGGGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VLWPPGECTLWVRERNHTLMLLA*ATRVCS
Trigger: GCTGCACACCCTTGTCGCCCATGCCAACAACATCAG...AGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCATCTCGGCCAGGCCATaGCTCCAGAAGGTTGATGTA +
Preference number: 4 (lower is better)
Translates to: LVLQLKGSAEQEALCSILISARP*LQKVDV
Trigger: TACATCAACCTTCTGGAGCCATGGCCTGGCCGAGAT...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAAATCTCGGCCAGGCCATaGCTCCAGAAGGTTGATGTA +
Preference number: 4 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQISARP*LQKVDV
Trigger: TACATCAACCTTCTGGAGCCATGGCCTGGCCGAGAT...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGAAGAACCCAGCTTCTaGCCAGCCATTCCTAATTTC +
Preference number: 4 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPREEPSF*PAIPNF
Trigger: GAAATTAGGAATGGCTGGCCAGAAGCTGGGTTCTTC...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAAGCTAAAGCTACTTGTTaGGTCGGCAGTGTCAGGTCG +
Preference number: 4 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQAKATC*VGSVRS
Trigger: CGACCTGACACTGCCGACCCAACAAGTAGCTTTAGC...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCAAATCCCACAGGGCCTaGAAGGGTGAGCCCATTCAT +
Preference number: 4 (lower is better)
Translates to: LVLQLKGSAEQEALCSILKSHRA*KGEPIH
Trigger: ATGAATGGGCTCACCCTTCCAGGCCCTGTGGGATTT...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp ACCACTAACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTCAGGCCTGCCCTCCTaGTGCTGCTTCATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TTNPVHMSTGPLRTELSVSGLPS*CCFICS
Trigger: GGAGCAGATGAAGCAGCACCAGGAGGGCAGGCCTGA...GACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTTAGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp ACCACTAACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCAGCTTGGGCTCCAGCTaGGCTGAAAGCAAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: TTNPVHMSTGPLRTELSVSLGSS*AESKGV
Trigger: CACTCCCTTGCTTTCAGCTCAGCTGGAGCCCAAGCT...GACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTTAGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGCCAAAGTCTCAAAGCTaGCATGATAGGTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRPKSQS*HDRSEL
Trigger: AAGCTCAGACCTATCATGTCAGCTTTGAGACTTTGG...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCTTCAAGGCTGTAGCATaGGAGGTCCACAGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: LVLQLKGSAEQEALCSILFKAVA*EVHSAH
Trigger: ATGAGCACTGTGGACCTCTCATGCTACAGCCTTGAA...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGTTCAGGCCCTTCAGTTaGGAAAATTTGTGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRFRPFS*ENLWSV
Trigger: CACACTCCACAAATTTTCTCAACTGAAGGGCCTGAA...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GAGAGGGGAGCAAGTCTAACTTGTGAGATCTGGCTGCCCATATATGTTCCTAGCGAAGGGAGAAGCCGCTaGGTGTCAGCTCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ERGASLTCEIWLPIYVPSEGRSR*VSAPSA
Trigger: AGCTGAGGGAGCTGACACTCAGCGGCTTCTCCCTTC...GCTAGGAACATATATGGGCAGCCAGATCTCACAAGTTAGACTTGCTCCCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp AACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTGCTTTGCTCATCCTGGTCAGTaGCCCCAGGTTCAGGACCTC +
Preference number: 4 (lower is better)
Translates to: NPVHMSTGPLRTELSVCFAHPGQ*PQVQDL
Trigger: GAGGTCCTGAACCTGGGGGCACTGACCAGGATGAGC...AAAGCAGACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCCTGGAGAGAGTGTTATaGTGGATATCCAGGACCTCG +
Preference number: 4 (lower is better)
Translates to: LVLQLKGSAEQEALCSILLERVL*WISRTS
Trigger: CGAGGTCCTGGATATCCAGCATAACACTCTCTCCAG...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCGCCTCCTCTGGGTCATaGTCCAAGCTGAAGACTTTA +
Preference number: 4 (lower is better)
Translates to: SGRGARERVRHRERMLTGASSGS*SKLKTL
Trigger: TAAAGTCTTCAGCTTGGAGCATGACCCAGAGGAGGC...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp GAGAGGGGAGCAAGTCTAACTTGTGAGATCTGGCTGCCCATATATGTTCCTAGCGGCCTGCCCTCCTGGTaGTGCTTCATCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ERGASLTCEIWLPIYVPSGLPSW*CFICSF
Trigger: GAAGGAGCAGATGAAGCAGCACCAGGAGGGCAGGCC...GCTAGGAACATATATGGGCAGCCAGATCTCACAAGTTAGACTTGCTCCCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCCTGCCTCGGCAGCAATaGATGTCTACCTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: LVLQLKGSAEQEALCSILLPRQQ*MSTSTS
Trigger: TGAAGTAGAGGTAGACATCCATTGCTGCCGAGGCAG...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCAGCACAATGGAGCCATTaGAGAGTTTCTTTCCATACA +
Preference number: 4 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPAQWSH*RVSFHT
Trigger: TGTATGGAAAGAAACTCTCCAATGGCTCCATTGTGC...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCATGGCTCCAGAAGGTTaGTGTAACTGCAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LVLQLKGSAEQEALCSILMAPEG*CNCRVC
Trigger: ACAGACTCTGCAGTTACATCAACCTTCTGGAGCCAT...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp GTCCTCTGGCCACCTGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTCTGGAGAGAGTGTTATaGTGGATATCCAGGACCTCG +
Preference number: 4 (lower is better)
Translates to: VLWPPGECTLWVRERNHTLERVL*WISRTS
Trigger: CGAGGTCCTGGATATCCAGCATAACACTCTCTCCAG...AGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp TGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTCACCTGACAGCCTAGTCAGGTACAGCAGCTaGAGCACACTCAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: WRMYPLGTGKESHSPDSLVRYSS*STLRLS
Trigger: GGAGAGTCTGAGTGTGCTGCAGCTGCTGTACCTGAC...TAGGCTGTCAGGTGAGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp ACCACTAACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCGGTCCCCATCAAACATaGCGTAGACAGCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: TTNPVHMSTGPLRTELSVGPHQT*RRQLPH
Trigger: GTGTGGGAGCTGTCTACGGCATGTTTGATGGGGACC...GACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTTAGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp GTCCTCTGGCCACCTGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTGGACAGCTTGGCACATaGCAACATTGGCTACAGTCA +
Preference number: 4 (lower is better)
Translates to: VLWPPGECTLWVRERNHTGQLGT*QHWLQS
Trigger: TGACTGTAGCCAATGTTGGCATGTGCCAAGCTGTCC...AGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp TGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTCACCTGACAGCCTAAGCTCTCTGGCTCTCTaGCTCGGCAGCAATGGATGT +
Preference number: 4 (lower is better)
Translates to: WRMYPLGTGKESHSPDSLSSLAL*LGSNGC
Trigger: ACATCCATTGCTGCCGAGGCAGAGAGCCAGAGAGCT...TAGGCTGTCAGGTGAGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCCACTCCAGCAAGTTTTaGGAGAGCTCCAAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: SGRGARERVRHRERMLTGHSSKF*ESSKEV
Trigger: CACTTCTTTGGAGCTCTCCCAAAACTTGCTGGAGTG...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp GTCCTCTGGCCACCTGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTGTGCCCGACCAAAACTaGTATGCACTGATCTGTCAG +
Preference number: 4 (lower is better)
Translates to: VLWPPGECTLWVRERNHTVPDQN*YALICQ
Trigger: CTGACAGATCAGTGCATACCAGTTTTGGTCGGGCAC...AGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCTGCAGAGTCTGTGGCTaGCAAAGGCTTCTGATCAAT +
Preference number: 4 (lower is better)
Translates to: SGRGARERVRHRERMLTGCRVCG*QRLLIN
Trigger: ATTGATCAGAAGCCTTTGCCAGCCACAGACTCTGCA...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGCACAATGGAGCCATTaGAGAGTTTCTTTCCATACA +
Preference number: 4 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRAQWSH*RVSFHT
Trigger: TGTATGGAAAGAAACTCTCCAATGGCTCCATTGTGC...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGCAAATCCATGTGCGTaGTATGTTTATTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRANPCA*YVYFLP
Trigger: TGGAAGGAAATAAACATATCACGCACATGGATTTGC...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp TTGCCGACTTGGGGGCTCACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCACCTCGAGGGGAATGTaGTCCACCAGTGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPTWGLTFRFLRTELLGSTSRGM*STSAGR
Trigger: CCTTCCTGCACTGGTGGAGCACATTCCCCTCGAGGT...GCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAGCCCCCAAGTCGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp GAGAGGGGAGCAAGTCTAACTTGTGAGATCTGGCTGCCCATATATGTTCCTAGCGGTCCCCATCAAACATaGCGTAGACAGCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: ERGASLTCEIWLPIYVPSGPHQT*RRQLPH
Trigger: GTGTGGGAGCTGTCTACGGCATGTTTGATGGGGACC...GCTAGGAACATATATGGGCAGCCAGATCTCACAAGTTAGACTTGCTCCCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp GAGAGGGGAGCAAGTCTAACTTGTGAGATCTGGCTGCCCATATATGTTCCTAGCCTGCCCTCCTGGTGCTaGTTCATCTGCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: ERGASLTCEIWLPIYVPSLPSWC*FICSFT
Trigger: AGTGAAGGAGCAGATGAAGCAGCACCAGGAGGGCAG...GCTAGGAACATATATGGGCAGCCAGATCTCACAAGTTAGACTTGCTCCCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp GTCCTCTGGCCACCTGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTCACTCCAGCAAGTTTTaGGAGAGCTCCAAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: VLWPPGECTLWVRERNHTHSSKF*ESSKEV
Trigger: CACTTCTTTGGAGCTCTCCCAAAACTTGCTGGAGTG...AGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCTTCAGGGCTGTGATGTaGCTAAACATGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: LVLQLKGSAEQEALCSILFRAVM*LNMSKV
Trigger: GACTTTGGACATGTTTAGCCACATCACAGCCCTGAA...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp AACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTGCTTTCTTGGGGAGGATCCATaGGTAGAGGTATGTGCACCC +
Preference number: 4 (lower is better)
Translates to: NPVHMSTGPLRTELSVCFLGEDP*VEVCAP
Trigger: GGGTGCACATACCTCTACCCATGGATCCTCCCCAAG...AAAGCAGACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCATCTTGAATGGTAAGTaGAGTGGAAGCTATGTGGGG +
Preference number: 4 (lower is better)
Translates to: LVLQLKGSAEQEALCSILILNGK*SGSYVG
Trigger: CCCCACATAGCTTCCACTCCACTTACCATTCAAGAT...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GTCCTCTGGCCACCTGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTTCGAGGCTGAGGGTCTaGAGATTTAGCAATTTACCA +
Preference number: 4 (lower is better)
Translates to: VLWPPGECTLWVRERNHTSRLRV*RFSNLP
Trigger: TGGTAAATTGCTAAATCTTCAGACCCTCAGCCTCGA...AGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCTGTGACGAAAATCGTTaGAGGAAATTCCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LVLQLKGSAEQEALCSILCDENR*RKFPEK
Trigger: CTTCTCTGGGAATTTCCTTCAACGATTTTCGTCACA...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGAGAAGGTATTGGTCATaGAAACTGTGTCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRRRYWS*KLCHLL
Trigger: CAACAAATGACACAGTTTTCATGACCAATACCTTCT...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAATTCAGCTCTTCCAGCTaGTCCAGTTTATTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQFSSSS*SSLFSL
Trigger: CAAGCTAAATAAACTGGAGCAGCTGGAAGAGCTGAA...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp GAGAGGGGAGCAAGTCTAACTTGTGAGATCTGGCTGCCCATATATGTTCCTAGCGGGTGTGCAGCCTTTTaGAGTTGGCTATGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: ERGASLTCEIWLPIYVPSGCAAF*SWLWLW
Trigger: CCACAACCATAGCCAACTGCAAAAGGCTGCACACCC...GCTAGGAACATATATGGGCAGCCAGATCTCACAAGTTAGACTTGCTCCCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTCACCTGACAGCCTATGCCGTTGCCATCTCTaGTACTCAGCCAAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: WRMYPLGTGKESHSPDSLCRCHL*YSAKVS
Trigger: TGAGACTTTGGCTGAGTACCAGAGATGGCAACGGCA...TAGGCTGTCAGGTGAGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp GTCCTCTGGCCACCTGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTATCACCGTTTTCAAGTaGTTCATCCTCAGATCCACG +
Preference number: 4 (lower is better)
Translates to: VLWPPGECTLWVRERNHTITVFK*FILRST
Trigger: CGTGGATCTGAGGATGAACCACTTGAAAACGGTGAT...AGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp AACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTGCTTTAAGCTATGTGGGGCTTaGGGAGGATCCATGGGTAGA +
Preference number: 4 (lower is better)
Translates to: NPVHMSTGPLRTELSVCFKLCGA*GGSMGR
Trigger: TCTACCCATGGATCCTCCCCAAGCCCCACATAGCTT...AAAGCAGACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTCACCTGACAGCCTACTGCCTCGGCAGCAATaGATGTCTACCTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: WRMYPLGTGKESHSPDSLLPRQQ*MSTSTS
Trigger: TGAAGTAGAGGTAGACATCCATTGCTGCCGAGGCAG...TAGGCTGTCAGGTGAGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAACTGGTGTCTCTACTGTaGAAAGGACAAGATGTAAAT +
Preference number: 4 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQLVSLL*KGQDVN
Trigger: ATTTACATCTTGTCCTTTGCACAGTAGAGACACCAG...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp GACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATACAGTGCTCATCCGCTaGGACACCACCTTAGACGCC +
Preference number: 4 (lower is better)
Translates to: DSAIFRRAQCQTTHSLQHTVLIR*DTTLDA
Trigger: GGCGTCTAAGGTGGTGTCGCAGCGGATGAGCACTGT...ATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp TTGCCGACTTGGGGGCTCACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCTGGTTCCGCTCACAGTaGAGCTGCTCCAAGCTACAT +
Preference number: 4 (lower is better)
Translates to: LPTWGLTFRFLRTELLGSWFRSQ*SCSKLH
Trigger: ATGTAGCTTGGAGCAGCTGCACTGTGAGCGGAACCA...GCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAGCCCCCAAGTCGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp GAGAGGGGAGCAAGTCTAACTTGTGAGATCTGGCTGCCCATATATGTTCCTAGCGGACAGCTTGGCACATaGCAACATTGGCTACAGTCA +
Preference number: 4 (lower is better)
Translates to: ERGASLTCEIWLPIYVPSGQLGT*QHWLQS
Trigger: TGACTGTAGCCAATGTTGGCATGTGCCAAGCTGTCC...GCTAGGAACATATATGGGCAGCCAGATCTCACAAGTTAGACTTGCTCCCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp ACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATTATGGGTAGAGGTATGTaGACCCCAGCAGCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: TQQYSEGHSAKQHTHYNIMGRGM*TPAAGC
Trigger: GCACCCGGCTGCTGGGGTGCACATACCTCTACCCAT...AATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp TGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTCACCTGACAGCCTACAAATAAACCACCATTaGCCCCACGTTGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: WRMYPLGTGKESHSPDSLQINHH*PHVVLT
Trigger: TGTCAGGACAACGTGGGGGCAATGGTGGTTTATTTG...TAGGCTGTCAGGTGAGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TTGCCGACTTGGGGGCTCACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCAAATCCCACAGGGCCTaGAAGGGTGAGCCCATTCAT +
Preference number: 4 (lower is better)
Translates to: LPTWGLTFRFLRTELLGSKSHRA*KGEPIH
Trigger: ATGAATGGGCTCACCCTTCCAGGCCCTGTGGGATTT...GCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAGCCCCCAAGTCGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp AACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTGCTTTCCTCTAGGGGCACAATaGAGCCATTGGAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: NPVHMSTGPLRTELSVCFPLGAQ*SHWRVS
Trigger: AGAAACTCTCCAATGGCTCCATTGTGCCCCTAGAGG...AAAGCAGACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GAGAGGGGAGCAAGTCTAACTTGTGAGATCTGGCTGCCCATATATGTTCCTAGCTCCAGCACATATTTCTaGCGCTGGTGTCTCTACTGT +
Preference number: 4 (lower is better)
Translates to: ERGASLTCEIWLPIYVPSSSTYF*RWCLYC
Trigger: ACAGTAGAGACACCAGCGTCAGAAATATGTGCTGGA...GCTAGGAACATATATGGGCAGCCAGATCTCACAAGTTAGACTTGCTCCCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GTCCTCTGGCCACCTGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTAACTGTGTCATTTGTTaGGTGCTGTACTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VLWPPGECTLWVRERNHTNCVIC*VLYFFQ
Trigger: TTGGAAGAAGTACAGCACTCAACAAATGACACAGTT...AGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCAGAAGGTATTGGTCATaGAAACTGTGTCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: SGRGARERVRHRERMLTGRRYWS*KLCHLL
Trigger: CAACAAATGACACAGTTTTCATGACCAATACCTTCT...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCATTCCTAATTTCCTGTaGGATACCAAGAAGGTATTG +
Preference number: 4 (lower is better)
Translates to: LVLQLKGSAEQEALCSILIPNFL*DTKKVL
Trigger: CAATACCTTCTTGGTATCTCACAGGAAATTAGGAAT...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATTGGACATCTCACTGCTaGACTCGGAGGCAATCCCAC +
Preference number: 4 (lower is better)
Translates to: DSAIFRRAQCQTTHSLQHWTSHC*TRRQSH
Trigger: GTGGGATTGCCTCCGAGTTCAGCAGTGAGATGTCCA...ATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp TGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTCACCTGACAGCCTAAGGCCATTGTCAGACTaGTTGCTGGAAAAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: WRMYPLGTGKESHSPDSLRPLSD*LLEKVA
Trigger: TGCTACTTTTTCCAGCAATCAGTCTGACAATGGCCT...TAGGCTGTCAGGTGAGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp TTGCCGACTTGGGGGCTCACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCAGCTCCCACACCCTCTaGAAAGTTATCCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: LPTWGLTFRFLRTELLGSSSHTL*KVIHSQ
Trigger: CTGGCTATGGATAACTTTGCAGAGGGTGTGGGAGCT...GCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAGCCCCCAAGTCGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCATGATCCATCTGGCATaGTTTTTCACCATAAAATCG +
Preference number: 4 (lower is better)
Translates to: SGRGARERVRHRERMLTGMIHLA*FFTIKS
Trigger: CGATTTTATGGTGAAAAACCATGCCAGATGGATCAT...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp AACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTGCTTTGAAGAACCCAGCTTCTaGCCAGCCATTCCTAATTTC +
Preference number: 4 (lower is better)
Translates to: NPVHMSTGPLRTELSVCFEEPSF*PAIPNF
Trigger: GAAATTAGGAATGGCTGGCCAGAAGCTGGGTTCTTC...AAAGCAGACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATGCTCATCCGAGGCCGTaGAGCCCACTTCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: QITSLLQEACITFWEMDYAHPRP*SPLHCS
Trigger: TGAGCAGTGAAGTGGGCTCCACGGCCTCGGATGAGC...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GAGAGGGGAGCAAGTCTAACTTGTGAGATCTGGCTGCCCATATATGTTCCTAGCAGGATTCGATCCAGATaGTCCATCTGGCATGGTTTT +
Preference number: 4 (lower is better)
Translates to: ERGASLTCEIWLPIYVPSRIRSR*SIWHGF
Trigger: AAAACCATGCCAGATGGATCATCTGGATCGAATCCT...GCTAGGAACATATATGGGCAGCCAGATCTCACAAGTTAGACTTGCTCCCCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GAGAGGGGAGCAAGTCTAACTTGTGAGATCTGGCTGCCCATATATGTTCCTAGCTCCAAATCAGTCAACTaGTTGTCCCGCAAATCCATG +
Preference number: 4 (lower is better)
Translates to: ERGASLTCEIWLPIYVPSSKSVN*LSRKSM
Trigger: CATGGATTTGCGGGACAATCAGTTGACTGATTTGGA...GCTAGGAACATATATGGGCAGCCAGATCTCACAAGTTAGACTTGCTCCCCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp TTCTGTCCACCAGGGATTGAGTTCACTGATTATTGCACGTGTATACTCCACAGTTCTCTGGGAAGATGCTaGTGTTGTTGGCATGGGCGA +
Preference number: 4 (lower is better)
Translates to: FCPPGIEFTDYCTCILHSSLGRC*CCWHGR
Trigger: TCGCCCATGCCAACAACATCAGCATCTTCCCAGAGA...ACTGTGGAGTATACACGTGCAATAATCAGTGAACTCAATCCCTGGTGGACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp TTGCCGACTTGGGGGCTCACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCATGGCTCCAGAAGGTTaGTGTAACTGCAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LPTWGLTFRFLRTELLGSMAPEG*CNCRVC
Trigger: ACAGACTCTGCAGTTACATCAACCTTCTGGAGCCAT...GCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAGCCCCCAAGTCGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp ACCACACCCAACAGCCGAGTGCTCTTTCTTCAGAAATCCTGTTTGTTTGGTTTTAGTGGGTCTTGCACGTaGCGTACTGCATTGACAGCT +
Preference number: 4 (lower is better)
Translates to: TTPNSRVLFLQKSCLFGFSGSCT*RTALTA
Trigger: AGCTGTCAATGCAGTACGTCACGTGCAAGACCCACT...AAAACCAAACAAACAGGATTTCTGAAGAAAGAGCACTCGGCTGTTGGGTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp ACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATTCTGTGGCCACCTCAATaGGGTTCAGGCTGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: TQQYSEGHSAKQHTHYNILWPPQ*GSGCPL
Trigger: TAGAGGACAGCCTGAACCTCATTGAGGTGGCCACAG...AATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp GACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATCGCTCACAGTGCAGCTaGTCCAAGCTACATAAGGAG +
Preference number: 4 (lower is better)
Translates to: DSAIFRRAQCQTTHSLQHRSQCS*SKLHKE
Trigger: CTCCTTATGTAGCTTGGAGCAGCTGCACTGTGAGCG...ATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp GACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATCTGGAGCTGGTTGTTTaGAAGGTGCAGAACTCGCAG +
Preference number: 4 (lower is better)
Translates to: DSAIFRRAQCQTTHSLQHLELVV*KVQNSQ
Trigger: CTGCGAGTTCTGCACCTTGCAAACAACCAGCTCCAG...ATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp AACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTGCTTTCCAGTTTATTTAGCTTaGTTGCAGGGAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: NPVHMSTGPLRTELSVCFPVYLA*LQGRSG
Trigger: TCCAGACCTTCCCTGCAAGCAAGCTAAATAAACTGG...AAAGCAGACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp AACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTGCTTTTTCAGGGCTGTGATGTaGCTAAACATGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: NPVHMSTGPLRTELSVCFFRAVM*LNMSKV
Trigger: GACTTTGGACATGTTTAGCCACATCACAGCCCTGAA...AAAGCAGACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp AACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTGCTTTATCTTGAATGGTAAGTaGAGTGGAAGCTATGTGGGG +
Preference number: 4 (lower is better)
Translates to: NPVHMSTGPLRTELSVCFILNGK*SGSYVG
Trigger: CCCCACATAGCTTCCACTCCACTTACCATTCAAGAT...AAAGCAGACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAAGCTCATCCGAGGCCGTaGAGCCCACTTCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQAHPRP*SPLHCS
Trigger: TGAGCAGTGAAGTGGGCTCCACGGCCTCGGATGAGC...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TTGCCGACTTGGGGGCTCACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCCATACAGACAAGAAGTaGAGGGAGACTTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPTWGLTFRFLRTELLGSHTDKK*RETSAA
Trigger: AGCTGCAGAAGTCTCCCTCCACTTCTTGTCTGTATG...GCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAGCCCCCAAGTCGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp ATAAGTCACCTGCTTGATTGGTTCTGTATCTCCAGTAGACATTTGATAGGCTGTAGGGCTCCAGTCTCCTaGCCAGATCTCCATGAAGCT +
Preference number: 4 (lower is better)
Translates to: ISHLLDWFCISSRHLIGCRAPVS*PDLHEA
Trigger: AGCTTCATGGAGATCTGGTCAGGAGACTGGAGCCCT...ACAGCCTATCAAATGTCTACTGGAGATACAGAACCAATCAAGCAGGTGACTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp ACCACACCCAACAGCCGAGTGCTCTTTCTTCAGAAATCCTGTTTGTTTGGTTTTCGCTCAGCCCATTTGTaGAGCTGGGTTTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: TTPNSRVLFLQKSCLFGFRSAHL*SWVFPL
Trigger: CAAAGGAAAAACCCAGCTGCACAAATGGGCTGAGCG...AAAACCAAACAAACAGGATTTCTGAAGAAAGAGCACTCGGCTGTTGGGTGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp ACCACTAACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTCCCGCAAATCCATGTaGGTGATATGTTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: TTNPVHMSTGPLRTELSVSRKSM*VICLFP
Trigger: AGGAAATAAACATATCACGCACATGGATTTGCGGGA...GACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTTAGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp ACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATTCGCTCACAGTGCAGCTaGTCCAAGCTACATAAGGAG +
Preference number: 4 (lower is better)
Translates to: TQQYSEGHSAKQHTHYNIRSQCS*SKLHKE
Trigger: CTCCTTATGTAGCTTGGAGCAGCTGCACTGTGAGCG...AATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATTTTATTCCTCTGCCCTaGCATCTCGGCCAGGCCATG +
Preference number: 4 (lower is better)
Translates to: QITSLLQEACITFWEMDYFIPLP*HLGQAM
Trigger: CATGGCCTGGCCGAGATGGCAGGGCAGAGGAATAAA...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATCAGAGTTTATTCCTCTaGCCTGCCATCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QITSLLQEACITFWEMDYQSLFL*PAISAR
Trigger: CCTGGCCGAGATGGCAGGGCAGAGGAATAAACTCTG...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp ACCACTAACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCGTGTCATTTGTTGAGTaGTGTACTTCTTCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: TTNPVHMSTGPLRTELSVVSFVE*CTSSKS
Trigger: GCTTTTGGAAGAAGTACAGCACTCAACAAATGACAC...GACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTTAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATAGCTCTCTGGCTCTCTaGCTCGGCAGCAATGGATGT +
Preference number: 4 (lower is better)
Translates to: QITSLLQEACITFWEMDYSSLAL*LGSNGC
Trigger: ACATCCATTGCTGCCGAGGCAGAGAGCCAGAGAGCT...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp GACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATGTGCCCGACCAAAACTaGTATGCACTGATCTGTCAG +
Preference number: 4 (lower is better)
Translates to: DSAIFRRAQCQTTHSLQHVPDQN*YALICQ
Trigger: CTGACAGATCAGTGCATACCAGTTTTGGTCGGGCAC...ATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp ACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATTCTTGCAGGGAAGGTCTaGAGCTGGTTGTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: TQQYSEGHSAKQHTHYNILAGKV*SWLFAR
Trigger: CCTTGCAAACAACCAGCTCCAGACCTTCCCTGCAAG...AATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp ATAAGTCACCTGCTTGATTGGTTCTGTATCTCCAGTAGACATTTGATAGGCTGTCGGCACAGGACAGCTTaGCACATGCCAACATTGGCT +
Preference number: 4 (lower is better)
Translates to: ISHLLDWFCISSRHLIGCRHRTA*HMPTLA
Trigger: AGCCAATGTTGGCATGTGCCAAGCTGTCCTGTGCCG...ACAGCCTATCAAATGTCTACTGGAGATACAGAACCAATCAAGCAGGTGACTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TTCTGTCCACCAGGGATTGAGTTCACTGATTATTGCACGTGTATACTCCACAGTTTTAGAAAGAGGTACTaGCTTCCCACCTCGGCACAG +
Preference number: 4 (lower is better)
Translates to: FCPPGIEFTDYCTCILHSFRKRY*LPTSAQ
Trigger: CTGTGCCGAGGTGGGAAGCCAGTACCTCTTTCTAAA...ACTGTGGAGTATACACGTGCAATAATCAGTGAACTCAATCCCTGGTGGACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp ACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATTTACTGGAGGAGGGAGTaGTTGGCTTGGGAGTATCCT +
Preference number: 4 (lower is better)
Translates to: TQQYSEGHSAKQHTHYNIYWRRE*LAWEYP
Trigger: AGGATACTCCCAAGCCAACCACTCCCTCCTCCAGTA...AATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATAGGCAATCCCACTACTaGAGGAGGGAGTGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: QITSLLQEACITFWEMDYRQSHY*RREWLA
Trigger: AGCCAACCACTCCCTCCTCCAGTAGTGGGATTGCCT...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATGACAAACTGATCCTCTaGTTCCAGCTGAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QITSLLQEACITFWEMDYDKLIL*FQLSGG
Trigger: GCCCCCACTCAGCTGGAACCAGAGGATCAGTTTGTC...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CAA 72 bp CCTAGGGACAAAGGAGCTGGGCTGCCTCTAAGAAGATaGGCTCCGAGTGCAGATTCAAAAATAAAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: PRDKGAGLPLRR*APSADSKIKGS
Trigger: TGAACCTTTTATTTTTGAATCTGCACTCGGAGCCAATCTTCTTAGAGGCAGCCCAGCTCCTTTGTCCCTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CAA 72 bp TCTGGCTGCCCATATATGTTCCTAGCTGGTCTCCTGTaGTACTCACTTGCTATAATTCAAGGAGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SGCPYMFLAGLL*YSLAIIQGVSP
Trigger: TGGGCTGACTCCTTGAATTATAGCAAGTGAGTACAACAGGAGACCAGCTAGGAACATATATGGGCAGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp ACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATTTTCAAGGCTGTAGCATaGGAGGTCCACAGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: TQQYSEGHSAKQHTHYNIFKAVA*EVHSAH
Trigger: ATGAGCACTGTGGACCTCTCATGCTACAGCCTTGAA...AATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp TTGCCGACTTGGGGGCTCACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCTGTGACGAAAATCGTTaGAGGAAATTCCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LPTWGLTFRFLRTELLGSCDENR*RKFPEK
Trigger: CTTCTCTGGGAATTTCCTTCAACGATTTTCGTCACA...GCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAGCCCCCAAGTCGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp ACCACACCCAACAGCCGAGTGCTCTTTCTTCAGAAATCCTGTTTGTTTGGTTTTGGAAGGACATGGATGTaGTTGTGTCCTACCATCAGT +
Preference number: 4 (lower is better)
Translates to: TTPNSRVLFLQKSCLFGFGRTWM*LCPTIS
Trigger: ACTGATGGTAGGACACAATCACATCCATGTCCTTCC...AAAACCAAACAAACAGGATTTCTGAAGAAAGAGCACTCGGCTGTTGGGTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATGCTTGGGAGTATCCTTaGGGGCTGCAGTTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: QITSLLQEACITFWEMDYAWEYP*GLQLKQ
Trigger: TTGCTTCAACTGCAGCCCTCAAGGATACTCCCAAGC...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp ATAAGTCACCTGCTTGATTGGTTCTGTATCTCCAGTAGACATTTGATAGGCTGTCCTGGTCTTTCTAGCTaGATGAAGTTGTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: ISHLLDWFCISSRHLIGCPGLSS*MKLCRR
Trigger: CCTGCGGCACAACTTCATGCAGCTAGAAAGACCAGG...ACAGCCTATCAAATGTCTACTGGAGATACAGAACCAATCAAGCAGGTGACTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAAGTCAGGTACAGCAGCTaGAGCACACTCAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQVRYSS*STLRLS
Trigger: GGAGAGTCTGAGTGTGCTGCAGCTGCTGTACCTGAC...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp TTGCCGACTTGGGGGCTCACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCTTCAGCTCTTCCAGCTaGTCCAGTTTATTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: LPTWGLTFRFLRTELLGSFSSSS*SSLFSL
Trigger: CAAGCTAAATAAACTGGAGCAGCTGGAAGAGCTGAA...GCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAGCCCCCAAGTCGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp ACCACTAACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTTTCTGTCAAGTCATTaGAACTCAGGTCTACAAACT +
Preference number: 4 (lower is better)
Translates to: TTNPVHMSTGPLRTELSVFLSSH*NSGLQT
Trigger: AGTTTGTAGACCTGAGTTGCAATGACTTGACAGAAA...GACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTTAGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAACAGAGTTTATTCCTCTaGCCTGCCATCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQQSLFL*PAISAR
Trigger: CCTGGCCGAGATGGCAGGGCAGAGGAATAAACTCTG...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAACTGCCCTCCTGGTGCTaGTTCATCTGCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQLPSWC*FICSFT
Trigger: AGTGAAGGAGCAGATGAAGCAGCACCAGGAGGGCAG...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TTCTGTCCACCAGGGATTGAGTTCACTGATTATTGCACGTGTATACTCCACAGTGCCCATTTGTGCAGCTaGGTTTTTCCTTTGCGTACA +
Preference number: 4 (lower is better)
Translates to: FCPPGIEFTDYCTCILHSAHLCS*VFPLRT
Trigger: TGTACGCAAAGGAAAAACCCAGCTGCACAAATGGGC...ACTGTGGAGTATACACGTGCAATAATCAGTGAACTCAATCCCTGGTGGACAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TTGCCGACTTGGGGGCTCACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCAGTCCAAGTTTATTATaGGACAAGTTCAGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LPTWGLTFRFLRTELLGSSPSLL*DKFRPF
Trigger: GAAGGGCCTGAACTTGTCCCATAATAAACTTGGACT...GCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAGCCCCCAAGTCGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp ATAAGTCACCTGCTTGATTGGTTCTGTATCTCCAGTAGACATTTGATAGGCTGTCTTGCAGGGAAGGTCTaGAGCTGGTTGTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: ISHLLDWFCISSRHLIGCLAGKV*SWLFAR
Trigger: CCTTGCAAACAACCAGCTCCAGACCTTCCCTGCAAG...ACAGCCTATCAAATGTCTACTGGAGATACAGAACCAATCAAGCAGGTGACTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp ATAAGTCACCTGCTTGATTGGTTCTGTATCTCCAGTAGACATTTGATAGGCTGTTACTGGAGGAGGGAGTaGTTGGCTTGGGAGTATCCT +
Preference number: 4 (lower is better)
Translates to: ISHLLDWFCISSRHLIGCYWRRE*LAWEYP
Trigger: AGGATACTCCCAAGCCAACCACTCCCTCCTCCAGTA...ACAGCCTATCAAATGTCTACTGGAGATACAGAACCAATCAAGCAGGTGACTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CAA 72 bp ACAGCCGAGTGCTCTTTCTTCAGAAATCCTGTTTGTTaGGTTTTGAGGCTGGGACTCATGTATACCAGACTG +
Preference number: 4 (lower is better)
Translates to: TAECSFFRNPVC*VLRLGLMYTRL
Trigger: CAGTCTGGTATACATGAGTCCCAGCCTCAAAACCAAACAAACAGGATTTCTGAAGAAAGAGCACTCGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CAA 72 bp AGTTCTACAGTGATGCTGCACACATCACCGGATGGCTaGGAGACGGGTTCTTTAGCAATTGGTACATTATCA +
Preference number: 4 (lower is better)
Translates to: SSTVMLHTSPDG*ETGSLAIGTLS
Trigger: TGATAATGTACCAATTGCTAAAGAACCCGTCTCCAAGCCATCCGGTGATGTGTGCAGCATCACTGTAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp ACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATTTCCAGCACATATTTCTaGCGCTGGTGTCTCTACTGT +
Preference number: 4 (lower is better)
Translates to: TQQYSEGHSAKQHTHYNISSTYF*RWCLYC
Trigger: ACAGTAGAGACACCAGCGTCAGAAATATGTGCTGGA...AATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATCCAAAGTCTCAAAGCTaGCATGATAGGTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: DSAIFRRAQCQTTHSLQHPKSQS*HDRSEL
Trigger: AAGCTCAGACCTATCATGTCAGCTTTGAGACTTTGG...ATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATTCGAGGCTGAGGGTCTaGAGATTTAGCAATTTACCA +
Preference number: 4 (lower is better)
Translates to: DSAIFRRAQCQTTHSLQHSRLRV*RFSNLP
Trigger: TGGTAAATTGCTAAATCTTCAGACCCTCAGCCTCGA...ATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAAAAATTCCCAGAGAAGTaGGCTGCCGCAGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQKFPEK*AAAGFP
Trigger: TGGGAAACCTGCGGCAGCTCACTTCTCTGGGAATTT...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp TTGCCGACTTGGGGGCTCACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCGCAAATCCATGTGCGTaGTATGTTTATTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LPTWGLTFRFLRTELLGSANPCA*YVYFLP
Trigger: TGGAAGGAAATAAACATATCACGCACATGGATTTGC...GCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAGCCCCCAAGTCGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp TTCTGTCCACCAGGGATTGAGTTCACTGATTATTGCACGTGTATACTCCACAGTTCCAAATCAGTCAACTaGTTGTCCCGCAAATCCATG +
Preference number: 4 (lower is better)
Translates to: FCPPGIEFTDYCTCILHSSKSVN*LSRKSM
Trigger: CATGGATTTGCGGGACAATCAGTTGACTGATTTGGA...ACTGTGGAGTATACACGTGCAATAATCAGTGAACTCAATCCCTGGTGGACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAATCTCTGGGAAGATGCTaGTGTTGTTGGCATGGGCGA +
Preference number: 4 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQSLGRC*CCWHGR
Trigger: TCGCCCATGCCAACAACATCAGCATCTTCCCAGAGA...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAATTCACTGCTCACCTCTaGGGTGGACATCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQFTAHL*GGHLTA
Trigger: AGCAGTGAGATGTCCACCTCAGAGGTGAGCAGTGAA...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp TTCTGTCCACCAGGGATTGAGTTCACTGATTATTGCACGTGTATACTCCACAGTGAAGTATACCACTGTTaGCACTGTTCTGTCTTCGGA +
Preference number: 4 (lower is better)
Translates to: FCPPGIEFTDYCTCILHSEVYHC*HCSVFG
Trigger: TCCGAAGACAGAACAGTGTCAACAGTGGTATACTTC...ACTGTGGAGTATACACGTGCAATAATCAGTGAACTCAATCCCTGGTGGACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp TTGCCGACTTGGGGGCTCACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCCTGGTGTCTCTACTGTaGAAAGGACAAGATGTAAAT +
Preference number: 4 (lower is better)
Translates to: LPTWGLTFRFLRTELLGSLVSLL*KGQDVN
Trigger: ATTTACATCTTGTCCTTTGCACAGTAGAGACACCAG...GCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAGCCCCCAAGTCGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAAAAAGCAAGGGAGTGCTaGCGGCGCTTCACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQKAREC*RRFTSS
Trigger: AGAAGAAGTGAAGCGCCGGCAGCACTCCCTTGCTTT...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAATGGTTCCGCTCACAGTaGAGCTGCTCCAAGCTACAT +
Preference number: 4 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQWFRSQ*SCSKLH
Trigger: ATGTAGCTTGGAGCAGCTGCACTGTGAGCGGAACCA...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp TTCTGTCCACCAGGGATTGAGTTCACTGATTATTGCACGTGTATACTCCACAGTTTCCAAAAGCACATCTaGCATTGTACACTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FCPPGIEFTDYCTCILHSFQKHI*HCTLQQ
Trigger: CTGCTGCAGTGTACAATGGCAGATGTGCTTTTGGAA...ACTGTGGAGTATACACGTGCAATAATCAGTGAACTCAATCCCTGGTGGACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAAACTCCTTCAACAGGCTaGTCATCGTCACTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQTPSTG*SSSLSR
Trigger: CCTGGACAGTGACGATGACCAGCCTGTTGAAGGAGT...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp ACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATTCATACAGACAAGAAGTaGAGGGAGACTTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TQQYSEGHSAKQHTHYNIHTDKK*RETSAA
Trigger: AGCTGCAGAAGTCTCCCTCCACTTCTTGTCTGTATG...AATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATCCTCTAGGGGCACAATaGAGCCATTGGAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: QITSLLQEACITFWEMDYPLGAQ*SHWRVS
Trigger: AGAAACTCTCCAATGGCTCCATTGTGCCCCTAGAGG...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp ACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATTTTCAGGCCCTTCAGTTaGGAAAATTTGTGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: TQQYSEGHSAKQHTHYNIFRPFS*ENLWSV
Trigger: CACACTCCACAAATTTTCTCAACTGAAGGGCCTGAA...AATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAACGCTCAGCCCATTTGTaGAGCTGGGTTTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQRSAHL*SWVFPL
Trigger: CAAAGGAAAAACCCAGCTGCACAAATGGGCTGAGCG...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp GACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATGGACTCCAGACTATTTaGAGATGCATTCAAGTACCT +
Preference number: 4 (lower is better)
Translates to: DSAIFRRAQCQTTHSLQHGLQTI*RCIQVP
Trigger: AGGTACTTGAATGCATCTGCAAATAGTCTGGAGTCC...ATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAAAGCTCCCACACCCTCTaGAAAGTTATCCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQSSHTL*KVIHSQ
Trigger: CTGGCTATGGATAACTTTGCAGAGGGTGTGGGAGCT...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAATTTAGAAAGAGGTACTaGCTTCCCACCTCGGCACAG +
Preference number: 4 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQFRKRY*LPTSAQ
Trigger: CTGTGCCGAGGTGGGAAGCCAGTACCTCTTTCTAAA...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CAA 72 bp GAGTGCTCTTTCTTCAGAAATCCTGTTTGTTTGGTTTaGAGGCTGGGACTCATGTATACCAGACTGGATTTG +
Preference number: 4 (lower is better)
Translates to: ECSFFRNPVCLV*RLGLMYTRLDL
Trigger: CAAATCCAGTCTGGTATACATGAGTCCCAGCCTCAAAACCAAACAAACAGGATTTCTGAAGAAAGAGCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp GACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATAACTGTGTCATTTGTTaGGTGCTGTACTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: DSAIFRRAQCQTTHSLQHNCVIC*VLYFFQ
Trigger: TTGGAAGAAGTACAGCACTCAACAAATGACACAGTT...ATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp ATAAGTCACCTGCTTGATTGGTTCTGTATCTCCAGTAGACATTTGATAGGCTGTAGGCCATTGTCAGACTaGTTGCTGGAAAAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: ISHLLDWFCISSRHLIGCRPLSD*LLEKVA
Trigger: TGCTACTTTTTCCAGCAATCAGTCTGACAATGGCCT...ACAGCCTATCAAATGTCTACTGGAGATACAGAACCAATCAAGCAGGTGACTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATGAAGTATACCACTGTTaGCACTGTTCTGTCTTCGGA +
Preference number: 4 (lower is better)
Translates to: QITSLLQEACITFWEMDYEVYHC*HCSVFG
Trigger: TCCGAAGACAGAACAGTGTCAACAGTGGTATACTTC...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATCCAGTTTATTTAGCTTaGTTGCAGGGAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: QITSLLQEACITFWEMDYPVYLA*LQGRSG
Trigger: TCCAGACCTTCCCTGCAAGCAAGCTAAATAAACTGG...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAAGCCCATTTGTGCAGCTaGGTTTTTCCTTTGCGTACA +
Preference number: 4 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQAHLCS*VFPLRT
Trigger: TGTACGCAAAGGAAAAACCCAGCTGCACAAATGGGC...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp ACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATTAGTCCAAGTTTATTATaGGACAAGTTCAGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: TQQYSEGHSAKQHTHYNISPSLL*DKFRPF
Trigger: GAAGGGCCTGAACTTGTCCCATAATAAACTTGGACT...AATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TTGCCGACTTGGGGGCTCACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCTTTACCAATCTGACTTaGCAAGTCATGAAATCCATT +
Preference number: 4 (lower is better)
Translates to: LPTWGLTFRFLRTELLGSFTNLT*QVMKSI
Trigger: AATGGATTTCATGACTTGCCAAGTCAGATTGGTAAA...GCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAGCCCCCAAGTCGGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CAA 72 bp AATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTaGGGAAATGGACTATGGCCTTTTAACCCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: NHLTVTRGVYYV*GNGLWPFNPLF
Trigger: AAACAGAGGGTTAAAAGGCCATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATGGACTCCAGACTATTTaGAGATGCATTCAAGTACCT +
Preference number: 4 (lower is better)
Translates to: QITSLLQEACITFWEMDYGLQTI*RCIQVP
Trigger: AGGTACTTGAATGCATCTGCAAATAGTCTGGAGTCC...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATTCCCGCAAATCCATGTaGGTGATATGTTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: QITSLLQEACITFWEMDYSRKSM*VICLFP
Trigger: AGGAAATAAACATATCACGCACATGGATTTGCGGGA...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp TTCTGTCCACCAGGGATTGAGTTCACTGATTATTGCACGTGTATACTCCACAGTTTTACCAATCTGACTTaGCAAGTCATGAAATCCATT +
Preference number: 4 (lower is better)
Translates to: FCPPGIEFTDYCTCILHSFTNLT*QVMKSI
Trigger: AATGGATTTCATGACTTGCCAAGTCAGATTGGTAAA...ACTGTGGAGTATACACGTGCAATAATCAGTGAACTCAATCCCTGGTGGACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CAA 72 bp CACCTGCTTGATTGGTTCTGTATCTCCAGTAGACATTaGATAGGCTGTATTCTCCTAGAGAATAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: HLLDWFCISSRH*IGCILLENKKP
Trigger: TGGCTTTTTATTCTCTAGGAGAATACAGCCTATCAAATGTCTACTGGAGATACAGAACCAATCAAGCAGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
3UTR CAA 72 bp AAAGACAATTACAAAACCAGAACCATCCATTTTGGTTaGGCCTACACTGAGGTTTCTCAACACAACCTAAGG +
Preference number: 4 (lower is better)
Translates to: KDNYKTRTIHFG*AYTEVSQHNLR
Trigger: CCTTAGGTTGTGTTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATTGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR TCA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATATTCCTAATTTCCTGTaGGATACCAAGAAGGTATTG +
Preference number: 4 (lower is better)
Translates to: QITSLLQEACITFWEMDYIPNFL*DTKKVL
Trigger: CAATACCTTCTTGGTATCTCACAGGAAATTAGGAAT...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp ATAAGTCACCTGCTTGATTGGTTCTGTATCTCCAGTAGACATTTGATAGGCTGTTTTCTGTCAAGTCATTaGAACTCAGGTCTACAAACT +
Preference number: 4 (lower is better)
Translates to: ISHLLDWFCISSRHLIGCFLSSH*NSGLQT
Trigger: AGTTTGTAGACCTGAGTTGCAATGACTTGACAGAAA...ACAGCCTATCAAATGTCTACTGGAGATACAGAACCAATCAAGCAGGTGACTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR GCA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAAGTGTCATTTGTTGAGTaGTGTACTTCTTCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQVSFVE*CTSSKS
Trigger: GCTTTTGGAAGAAGTACAGCACTCAACAAATGACAC...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CCA 90 bp ATAAGTCACCTGCTTGATTGGTTCTGTATCTCCAGTAGACATTTGATAGGCTGTATGATCCATCTGGCATaGTTTTTCACCATAAAATCG +
Preference number: 4 (lower is better)
Translates to: ISHLLDWFCISSRHLIGCMIHLA*FFTIKS
Trigger: CGATTTTATGGTGAAAAACCATGCCAGATGGATCAT...ACAGCCTATCAAATGTCTACTGGAGATACAGAACCAATCAAGCAGGTGACTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp GCACAAGAAGGCTGGCGCTGGAACACCCCTGCGGAGGACGCTGGGTaGAGACTGCAGCGCCTCTCTGGCCTGGGCAGCAAGCTCGCCTCC +
Preference number: 5 (lower is better)
Translates to: AQEGWRWNTPAEDAG*RLQRLSGLGSKLAS
Trigger: GGAGGCGAGCTTGCTGCCCAGGCCAGAGAGGCGCTGCAGTCTGCACCCAGCGTCCTCCGCAGGGGTGTTCCAGCGCCAGCCTTCTTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 90 bp GAACACCCCTGCGGAGGACGCTGGGTGCAGACTGCAGCGCCTCTCTaGCCTGGGCAGCAAGCTCGCCTCCAGGCCCACAGTGTTGTGCTC +
Preference number: 5 (lower is better)
Translates to: EHPCGGRWVQTAAPL*PGQQARLQAHSVVL
Trigger: GAGCACAACACTGTGGGCCTGGAGGCGAGCTTGCTGCCCAGGCCAGAGAGGCGCTGCAGTCTGCACCCAGCGTCCTCCGCAGGGGTGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp CGCTCCTCTCCCCGGGGCTCGGGCTCAGGCCTGCCCTCCTGGTGCTaGTTCATCTGCTCCTTCACTTCCTCTTCCAGGTCTCGAGGGACG +
Preference number: 5 (lower is better)
Translates to: RSSPRGSGSGLPSWC*FICSFTSSSRSRGT
Trigger: CGTCCCTCGAGACCTGGAAGAGGAAGTGAAGGAGCAGATGAAGCAGCACCAGGAGGGCAGGCCTGAGCCCGAGCCCCGGGGAGAGGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 90 bp AGTAGCACAAGAAGGCTGGCGCTGGAACACCCCTGCGGAGGACGCTaGGTGCAGACTGCAGCGCCTCTCTGGCCTGGGCAGCAAGCTCGC +
Preference number: 5 (lower is better)
Translates to: SSTRRLALEHPCGGR*VQTAAPLWPGQQAR
Trigger: GCGAGCTTGCTGCCCAGGCCAGAGAGGCGCTGCAGTCTGCACCCAGCGTCCTCCGCAGGGGTGTTCCAGCGCCAGCCTTCTTGTGCTACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp CTCTCTGGCCTGGGCAGCAAGCTCGCCTCCAGGCCCACAGTGTTGTaGTCATCCGAGGCCGTGGAGCCCACTTCACTGCTCACCTCTGAG +
Preference number: 5 (lower is better)
Translates to: LSGLGSKLASRPTVL*SSEAVEPTSLLTSE
Trigger: CTCAGAGGTGAGCAGTGAAGTGGGCTCCACGGCCTCGGATGAGCACAACACTGTGGGCCTGGAGGCGAGCTTGCTGCCCAGGCCAGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp ATTGCTGGAAAAAGTAGCACAAGAAGGCTGGCGCTGGAACACCCCTaGGGAGGACGCTGGGTGCAGACTGCAGCGCCTCTCTGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: IAGKSSTRRLALEHP*GGRWVQTAAPLWPG
Trigger: CCCAGGCCAGAGAGGCGCTGCAGTCTGCACCCAGCGTCCTCCGCAGGGGTGTTCCAGCGCCAGCCTTCTTGTGCTACTTTTTCCAGCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 90 bp GCAAGCTCGCCTCCAGGCCCACAGTGTTGTGCTCATCCGAGGCCGTaGAGCCCACTTCACTGCTCACCTCTGAGGTGGACATCTCACTGC +
Preference number: 5 (lower is better)
Translates to: ASSPPGPQCCAHPRP*SPLHCSPLRWTSHC
Trigger: GCAGTGAGATGTCCACCTCAGAGGTGAGCAGTGAAGTGGGCTCCACGGCCTCGGATGAGCACAACACTGTGGGCCTGGAGGCGAGCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 90 bp TCAGCCTGTTCCAACTGGCGTAGAGGGTTCGAAGGGAGAAGCCGCTaGGTGTCAGCTCCCTCAGCTGGTTCCGCTCACAGTGCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SACSNWRRGFEGRSR*VSAPSAGSAHSAAA
Trigger: AGCAGCTGCACTGTGAGCGGAACCAGCTGAGGGAGCTGACACTCAGCGGCTTCTCCCTTCGAACCCTCTACGCCAGTTGGAACAGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 90 bp GGAAATTCCCAGAGAAGTGAGCTGCCGCAGGTTTCCCAACTCATCTaGCAGAGCCGTGAGGCCGTTGCCGTCGAGGCTGAGGGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: GNSQRSELPQVSQLI*QSREAVAVEAEGLK
Trigger: CTTCAGACCCTCAGCCTCGACGGCAACGGCCTCACGGCTCTGCCAGATGAGTTGGGAAACCTGCGGCAGCTCACTTCTCTGGGAATTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGTCGGCACAGGACAGCTaGGCACATGCCAACATTGGC +
Preference number: 5 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRSAQDS*AHANIG
Trigger: GCCAATGTTGGCATGTGCCAAGCTGTCCTGTGCCGA...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp CGTTGGAAGAGTTCTTCGGGAGCGGAGGGGAGCTCTCTGGCTCTCTaGCTCGGCAGCAATGGATGTCTACCTCTACTTCAACCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RWKSSSGAEGSSLAL*LGSNGCLPLLQPCC
Trigger: GCAGCAGGGTTGAAGTAGAGGTAGACATCCATTGCTGCCGAGGCAGAGAGCCAGAGAGCTCCCCTCCGCTCCCGAAGAACTCTTCCAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 90 bp GCCTTGGAGAAGAGCGTGTCCGGCAGCCTGGAGAGAGTGTTATGCTaGATATCCAGGACCTCGAGGGGAATGTGCTCCACCAGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: ALEKSVSGSLERVLC*ISRTSRGMCSTSAG
Trigger: TCCTGCACTGGTGGAGCACATTCCCCTCGAGGTCCTGGATATCCAGCATAACACTCTCTCCAGGCTGCCGGACACGCTCTTCTCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGCTGAGATTTAAGGCCTaGGAGAAGAGCGTGTCCGGC +
Preference number: 5 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRLRFKA*EKSVSG
Trigger: GCCGGACACGCTCTTCTCCAAGGCCTTAAATCTCAG...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 90 bp TGGAGCCCACTTCACTGCTCACCTCTGAGGTGGACATCTCACTGCTaGACTCGGAGGCAATCCCACTACTGGAGGAGGGAGTGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: WSPLHCSPLRWTSHC*TRRQSHYWRREWLA
Trigger: AGCCAACCACTCCCTCCTCCAGTAGTGGGATTGCCTCCGAGTTCAGCAGTGAGATGTCCACCTCAGAGGTGAGCAGTGAAGTGGGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp GTTCATCCTCAGATCCACGTGCTTGACCTGGCTCATCCTGGTCAGTaGCCCCAGGTTCAGGACCTCCAAACGGTTTCCTGCCATAGCCAC +
Preference number: 5 (lower is better)
Translates to: VHPQIHVLDLAHPGQ*PQVQDLQTVSCHSH
Trigger: GTGGCTATGGCAGGAAACCGTTTGGAGGTCCTGAACCTGGGGGCACTGACCAGGATGAGCCAGGTCAAGCACGTGGATCTGAGGATGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp AAGGCCTTGGAGAAGAGCGTGTCCGGCAGCCTGGAGAGAGTGTTATaGTGGATATCCAGGACCTCGAGGGGAATGTGCTCCACCAGTGCA +
Preference number: 5 (lower is better)
Translates to: KALEKSVSGSLERVL*WISRTSRGMCSTSA
Trigger: TGCACTGGTGGAGCACATTCCCCTCGAGGTCCTGGATATCCAGCATAACACTCTCTCCAGGCTGCCGGACACGCTCTTCTCCAAGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 90 bp GGAGGAGGGAGTGGTTGGCTTGGGAGTATCCTTGAGGGCTGCAGTTaGAGCAAATCCCACAGGGCCTGGAAGGGTGAGCCCATTCATTTC +
Preference number: 5 (lower is better)
Translates to: GGGSGWLGSILEGCS*SKSHRAWKGEPIHF
Trigger: GAAATGAATGGGCTCACCCTTCCAGGCCCTGTGGGATTTGCTTCAACTGCAGCCCTCAAGGATACTCCCAAGCCAACCACTCCCTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp GAGCTCCAAAGAAGTGAGCAGGCTGGGCACTGGGTACACATTCACTaGCGTCAGCCTGTTCCAACTGGCGTAGAGGGTTCGAAGGGAGAA +
Preference number: 5 (lower is better)
Translates to: ELQRSEQAGHWVHIH*RQPVPTGVEGSKGE
Trigger: TTCTCCCTTCGAACCCTCTACGCCAGTTGGAACAGGCTGACGGCAGTGAATGTGTACCCAGTGCCCAGCCTGCTCACTTCTTTGGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGAGGTAGGTGATGTCTaGGCTGTAGAAGAGATGCTC +
Preference number: 5 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPREVGDV*AVEEML
Trigger: GAGCATCTCTTCTACAGCCAAGACATCACCTACCTC...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGTCAAATAAACCACCATaGCCCCCACGTTGTCCTGAC +
Preference number: 5 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRSNKPP*PPRCPD
Trigger: GTCAGGACAACGTGGGGGCAATGGTGGTTTATTTGA...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 90 bp AGTCAGGGACACACTCCAGCAAGTTTTGGGAGAGCTCCAAAGAAGTaGGCAGGCTGGGCACTGGGTACACATTCACTGCCGTCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: SQGHTPASFGRAPKK*AGWALGTHSLPSAC
Trigger: ACAGGCTGACGGCAGTGAATGTGTACCCAGTGCCCAGCCTGCTCACTTCTTTGGAGCTCTCCCAAAACTTGCTGGAGTGTGTCCCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 90 bp TGCAGAACTCGCAGGTGTGGGTGCCCGACCAAAACTGGTATGCACTaGTCTGTCAGAAGGTTGCTGGTCAGGTACAGCAGCTGCAGCACA +
Preference number: 5 (lower is better)
Translates to: CRTRRCGCPTKTGMH*SVRRLLVRYSSCST
Trigger: TGTGCTGCAGCTGCTGTACCTGACCAGCAACCTTCTGACAGATCAGTGCATACCAGTTTTGGTCGGGCACCCACACCTGCGAGTTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp GAGAAGCCGCTGAGTGTCAGCTCCCTCAGCTGGTTCCGCTCACAGTaGAGCTGCTCCAAGCTACATAAGGAGCTAAGGTCCAAATCAGTC +
Preference number: 5 (lower is better)
Translates to: EKPLSVSSLSWFRSQ*SCSKLHKELRSKSV
Trigger: GACTGATTTGGACCTTAGCTCCTTATGTAGCTTGGAGCAGCTGCACTGTGAGCGGAACCAGCTGAGGGAGCTGACACTCAGCGGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 90 bp ATCACCGTTTTCAAGTGGTTCATCCTCAGATCCACGTGCTTGACCTaGCTCATCCTGGTCAGTGCCCCCAGGTTCAGGACCTCCAAACGG +
Preference number: 5 (lower is better)
Translates to: ITVFKWFILRSTCLT*LILVSAPRFRTSKR
Trigger: CCGTTTGGAGGTCCTGAACCTGGGGGCACTGACCAGGATGAGCCAGGTCAAGCACGTGGATCTGAGGATGAACCACTTGAAAACGGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 90 bp CAGCAAGTTTTGGGAGAGCTCCAAAGAAGTGAGCAGGCTGGGCACTaGGTACACATTCACTGCCGTCAGCCTGTTCCAACTGGCGTAGAG +
Preference number: 5 (lower is better)
Translates to: QQVLGELQRSEQAGH*VHIHCRQPVPTGVE
Trigger: CTCTACGCCAGTTGGAACAGGCTGACGGCAGTGAATGTGTACCCAGTGCCCAGCCTGCTCACTTCTTTGGAGCTCTCCCAAAACTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAAAAGATGCTGATGTTGTaGGCATGGGCGACAAGGGTG +
Preference number: 5 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQKMLML*AWATRV
Trigger: CACCCTTGTCGCCCATGCCAACAACATCAGCATCTT...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCAAGATGCTGATGTTGTaGGCATGGGCGACAAGGGTG +
Preference number: 5 (lower is better)
Translates to: LVLQLKGSAEQEALCSILKMLML*AWATRV
Trigger: CACCCTTGTCGCCCATGCCAACAACATCAGCATCTT...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp TTTAGCTTGCTTGCAGGGAAGGTCTGGAGCTGGTTGTTTGCAAGGTaGAGAACTCGCAGGTGTGGGTGCCCGACCAAAACTGGTATGCAC +
Preference number: 5 (lower is better)
Translates to: FSLLAGKVWSWLFAR*RTRRCGCPTKTGMH
Trigger: GTGCATACCAGTTTTGGTCGGGCACCCACACCTGCGAGTTCTGCACCTTGCAAACAACCAGCTCCAGACCTTCCCTGCAAGCAAGCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 90 bp GTTTGCAAGGTGCAGAACTCGCAGGTGTGGGTGCCCGACCAAAACTaGTATGCACTGATCTGTCAGAAGGTTGCTGGTCAGGTACAGCAG +
Preference number: 5 (lower is better)
Translates to: VCKVQNSQVWVPDQN*YALICQKVAGQVQQ
Trigger: CTGCTGTACCTGACCAGCAACCTTCTGACAGATCAGTGCATACCAGTTTTGGTCGGGCACCCACACCTGCGAGTTCTGCACCTTGCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 90 bp GACACACAGAGTTTATTCCTCTGCCCTGCCATCTCGGCCAGGCCATaGCTCCAGAAGGTTGATGTAACTGCAGAGTCTGTGGCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: DTQSLFLCPAISARP*LQKVDVTAESVAGK
Trigger: TTTGCCAGCCACAGACTCTGCAGTTACATCAACCTTCTGGAGCCATGGCCTGGCCGAGATGGCAGGGCAGAGGAATAAACTCTGTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAAGAGGTAGGTGATGTCTaGGCTGTAGAAGAGATGCTC +
Preference number: 5 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQEVGDV*AVEEML
Trigger: GAGCATCTCTTCTACAGCCAAGACATCACCTACCTC...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCTGCAGCCTTTTGCAGTaGGCTATGGTTGTGGGGATA +
Preference number: 5 (lower is better)
Translates to: LVLQLKGSAEQEALCSILCSLLQ*AMVVGI
Trigger: TATCCCCACAACCATAGCCAACTGCAAAAGGCTGCA...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp GTCCTCTGGCCACCTGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTAGGGTGTGCAGCCTTTaGCAGTTGGCTATGGTTGTG +
Preference number: 5 (lower is better)
Translates to: VLWPPGECTLWVRERNHTRVCSL*QLAMVV
Trigger: CACAACCATAGCCAACTGCAAAAGGCTGCACACCCT...AGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCAAAGCACATCTGCCATaGTACACTGCAGCAGACGAG +
Preference number: 5 (lower is better)
Translates to: SGRGARERVRHRERMLTGKAHLP*YTAADE
Trigger: CTCGTCTGCTGCAGTGTACAATGGCAGATGTGCTTT...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp CTTGACTGGGGCCACAGACACTCTCTGCCAGTGAGCTTCCTGAACCACACCCAAAAAGCACATCTGCCATaGTACACTGCAGCAGACGAG +
Preference number: 5 (lower is better)
Translates to: LDWGHRHSLPVSFLNHTQKAHLP*YTAADE
Trigger: CTCGTCTGCTGCAGTGTACAATGGCAGATGTGCTTT...TTGGGTGTGGTTCAGGAAGCTCACTGGCAGAGAGTGTCTGTGGCCCCAGTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp GCAAAGTTATCCATAGCCAGGGCAGACACACAGAGTTTATTCCTCTaGCCTGCCATCTCGGCCAGGCCATGGCTCCAGAAGGTTGATGTA +
Preference number: 5 (lower is better)
Translates to: AKLSIARADTQSLFL*PAISARPWLQKVDV
Trigger: TACATCAACCTTCTGGAGCCATGGCCTGGCCGAGATGGCAGGGCAGAGGAATAAACTCTGTGTGTCTGCCCTGGCTATGGATAACTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 90 bp GAAGGTCTGGAGCTGGTTGTTTGCAAGGTGCAGAACTCGCAGGTGTaGGTGCCCGACCAAAACTGGTATGCACTGATCTGTCAGAAGGTT +
Preference number: 5 (lower is better)
Translates to: EGLELVVCKVQNSQV*VPDQNWYALICQKV
Trigger: AACCTTCTGACAGATCAGTGCATACCAGTTTTGGTCGGGCACCCACACCTGCGAGTTCTGCACCTTGCAAACAACCAGCTCCAGACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 90 bp TCTTCCAGCTGCTCCAGTTTATTTAGCTTGCTTGCAGGGAAGGTCTaGAGCTGGTTGTTTGCAAGGTGCAGAACTCGCAGGTGTGGGTGC +
Preference number: 5 (lower is better)
Translates to: SSSCSSLFSLLAGKV*SWLFARCRTRRCGC
Trigger: GCACCCACACCTGCGAGTTCTGCACCTTGCAAACAACCAGCTCCAGACCTTCCCTGCAAGCAAGCTAAATAAACTGGAGCAGCTGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 90 bp CTCCTCTGGGTCATGCTCCAAGCTGAAGACTTTAGAAAGAGGTACTaGCTTCCCACCTCGGCACAGGACAGCTTGGCACATGCCAACATT +
Preference number: 5 (lower is better)
Translates to: LLWVMLQAEDFRKRY*LPTSAQDSLAHANI
Trigger: AATGTTGGCATGTGCCAAGCTGTCCTGTGCCGAGGTGGGAAGCCAGTACCTCTTTCTAAAGTCTTCAGCTTGGAGCATGACCCAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp ACCACTAACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCCTGAGATTTAAGGCCTaGGAGAAGAGCGTGTCCGGC +
Preference number: 5 (lower is better)
Translates to: TTNPVHMSTGPLRTELSVLRFKA*EKSVSG
Trigger: GCCGGACACGCTCTTCTCCAAGGCCTTAAATCTCAG...GACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTTAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCGTTTATTTAGCTTGCTaGCAGGGAAGGTCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: SGRGARERVRHRERMLTGVYLAC*QGRSGA
Trigger: AGCTCCAGACCTTCCCTGCAAGCAAGCTAAATAAAC...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp TGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGGCCAATTTCTGTCAAGTCATaGCAACTCAGGTCTACAAAC +
Preference number: 5 (lower is better)
Translates to: CDAAASLSLGSTCPTSGPISVKS*QLRSTN
Trigger: GTTTGTAGACCTGAGTTGCAATGACTTGACAGAAAT...TGGCCCCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCTGGCACATGCCAACATaGGCTACAGTCAAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: LVLQLKGSAEQEALCSILWHMPT*ATVKLK
Trigger: CTTTAGCTTGACTGTAGCCAATGTTGGCATGTGCCA...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp AACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTGCTTTGAGGGAGTGGTTGGCTaGGGAGTATCCTTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: NPVHMSTGPLRTELSVCFEGVVG*GVSLRA
Trigger: AGCCCTCAAGGATACTCCCAAGCCAACCACTCCCTC...AAAGCAGACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp CTCGTTCTTCAGCTCAAAGGCTCTGCTGAGCAGGAGGCTCTCTGCAGCATCCTCGGCACAATGGAGCCATaGGAGAGTTTCTTTCCATAC +
Preference number: 5 (lower is better)
Translates to: LVLQLKGSAEQEALCSILGTMEP*ESFFPY
Trigger: GTATGGAAAGAAACTCTCCAATGGCTCCATTGTGCC...GAGGATGCTGCAGAGAGCCTCCTGCTCAGCAGAGCCTTTGAGCTGAAGAACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 90 bp CAAAGTCTCAAAGCTGACATGATAGGTCTGAGCTTGGGCTCCAGCTaGGCTGAAAGCAAGGGAGTGCTGCCGGCGCTTCACTTCTTCTAT +
Preference number: 5 (lower is better)
Translates to: QSLKADMIGLSLGSS*AESKGVLPALHFFY
Trigger: ATAGAAGAAGTGAAGCGCCGGCAGCACTCCCTTGCTTTCAGCTCAGCTGGAGCCCAAGCTCAGACCTATCATGTCAGCTTTGAGACTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp GTTATGCTGGATATCCAGGACCTCGAGGGGAATGTGCTCCACCAGTaGAGGAAGGACATGGATGTGATTGTGTCCTACCATCAGTTTCCG +
Preference number: 5 (lower is better)
Translates to: VMLDIQDLEGNVLHQ*RKDMDVIVSYHQFP
Trigger: CGGAAACTGATGGTAGGACACAATCACATCCATGTCCTTCCTGCACTGGTGGAGCACATTCCCCTCGAGGTCCTGGATATCCAGCATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp GAGAGGGGAGCAAGTCTAACTTGTGAGATCTGGCTGCCCATATATGTTCCTAGCGGGAAGATGCTGATGTaGTTGGCATGGGCGACAAGG +
Preference number: 5 (lower is better)
Translates to: ERGASLTCEIWLPIYVPSGKMLM*LAWATR
Trigger: CCTTGTCGCCCATGCCAACAACATCAGCATCTTCCC...GCTAGGAACATATATGGGCAGCCAGATCTCACAAGTTAGACTTGCTCCCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp GCAGATGTGACGCAGCCGCTTCTCTCAGTCTGGGGAGTACTTGCCCAACCTCGGGATACCAAGAAGGTATaGGTCATGAAAACTGTGTCA +
Preference number: 5 (lower is better)
Translates to: ADVTQPLLSVWGVLAQPRDTKKV*VMKTVS
Trigger: TGACACAGTTTTCATGACCAATACCTTCTTGGTATC...CCGAGGTTGGGCAAGTACTCCCCAGACTGAGAGAAGCGGCTGCGTCACATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp TCTGGGAGAGGTGCGAGAGAGAGAGTTAGACACAGGGAGCGAATGCTGACTGGCAGAAGTATACCACTGTaGACACTGTTCTGTCTTCGG +
Preference number: 5 (lower is better)
Translates to: SGRGARERVRHRERMLTGRSIPL*TLFCLR
Trigger: CCGAAGACAGAACAGTGTCAACAGTGGTATACTTCT...GCCAGTCAGCATTCGCTCCCTGTGTCTAACTCTCTCTCTCGCACCTCTCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 90 bp ACCTCGAGGGGAATGTGCTCCACCAGTGCAGGAAGGACATGGATGTaGTTGTGTCCTACCATCAGTTTCCGAAGACTCAGACTACTCAGA +
Preference number: 5 (lower is better)
Translates to: TSRGMCSTSAGRTWM*LCPTISFRRLRLLR
Trigger: TCTGAGTAGTCTGAGTCTTCGGAAACTGATGGTAGGACACAATCACATCCATGTCCTTCCTGCACTGGTGGAGCACATTCCCCTCGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp ATTCCGGTCCCCATCAAACATGCCGTAGACAGCTCCCACACCCTCTaGAAAGTTATCCATAGCCAGGGCAGACACACAGAGTTTATTCCT +
Preference number: 5 (lower is better)
Translates to: IPVPIKHAVDSSHTL*KVIHSQGRHTEFIP
Trigger: AGGAATAAACTCTGTGTGTCTGCCCTGGCTATGGATAACTTTGCAGAGGGTGTGGGAGCTGTCTACGGCATGTTTGATGGGGACCGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 90 bp AGAAGTGGAGGGAGACTTCTGCAGCTCCATCTTGTCTCTGTTCGCTaGCAGAAGTATACCACTGTTGACACTGTTCTGTCTTCGGATCCC +
Preference number: 5 (lower is better)
Translates to: RSGGRLLQLHLVSVR*QKYTTVDTVLSSDP
Trigger: GGGATCCGAAGACAGAACAGTGTCAACAGTGGTATACTTCTGCCAGCGAACAGAGACAAGATGGAGCTGCAGAAGTCTCCCTCCACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp TGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTCACCTGACAGCCTATGCAGCCTTTTGCAGTaGGCTATGGTTGTGGGGATA +
Preference number: 5 (lower is better)
Translates to: WRMYPLGTGKESHSPDSLCSLLQ*AMVVGI
Trigger: TATCCCCACAACCATAGCCAACTGCAAAAGGCTGCA...TAGGCTGTCAGGTGAGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp AACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTGCTTTAGGGTGTGCAGCCTTTaGCAGTTGGCTATGGTTGTG +
Preference number: 5 (lower is better)
Translates to: NPVHMSTGPLRTELSVCFRVCSL*QLAMVV
Trigger: CACAACCATAGCCAACTGCAAAAGGCTGCACACCCT...AAAGCAGACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp CTCTTCCCTCTCCAGCACATATTTCTGACGCTGGTGTCTCTACTGTaGAAAGGACAAGATGTAAATCAGAAGAGGAGGAGGAGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: LFPLQHIFLTLVSLL*KGQDVNQKRRRRRR
Trigger: CCTCCTCCTCCTCCTCCTCTTCTGATTTACATCTTGTCCTTTGCACAGTAGAGACACCAGCGTCAGAAATATGTGCTGGAGAGGGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 90 bp TTGGCACATGCCAACATTGGCTACAGTCAAGCTAAAGCTACTTGTTaGGTCGGCAGTGTCAGGTCGAATATAGCACAGGAGAGCCGAAGA +
Preference number: 5 (lower is better)
Translates to: LAHANIGYSQAKATC*VGSVRSNIAQESRR
Trigger: TCTTCGGCTCTCCTGTGCTATATTCGACCTGACACTGCCGACCCAACAAGTAGCTTTAGCTTGACTGTAGCCAATGTTGGCATGTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 90 bp GCACAATGGAGCCATTGGAGAGTTTCTTTCCATACAGACAAGAAGTaGAGGGAGACTTCTGCAGCTCCATCTTGTCTCTGTTCGCTGGCA +
Preference number: 5 (lower is better)
Translates to: AQWSHWRVSFHTDKK*RETSAAPSCLCSLA
Trigger: TGCCAGCGAACAGAGACAAGATGGAGCTGCAGAAGTCTCCCTCCACTTCTTGTCTGTATGGAAAGAAACTCTCCAATGGCTCCATTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp GTCCTCTGGCCACCTGGAGAATGTACCCTCTGGGTACGGGAAAGGAATCACACTGTTCCAGGACCAGATTaGTATTTCCTGTCAGATCAA +
Preference number: 5 (lower is better)
Translates to: VLWPPGECTLWVRERNHTVPGPD*YFLSDQ
Trigger: TTGATCTGACAGGAAATACAAATCTGGTCCTGGAAC...AGTGTGATTCCTTTCCCGTACCCAGAGGGTACATTCTCCAGGTGGCCAGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp ACCACACCCAACAGCCGAGTGCTCTTTCTTCAGAAATCCTGTTTGTTTGGTTTTTCGGCACAGGACAGCTaGGCACATGCCAACATTGGC +
Preference number: 5 (lower is better)
Translates to: TTPNSRVLFLQKSCLFGFSAQDS*AHANIG
Trigger: GCCAATGTTGGCATGTGCCAAGCTGTCCTGTGCCGA...AAAACCAAACAAACAGGATTTCTGAAGAAAGAGCACTCGGCTGTTGGGTGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp TTGCCGACTTGGGGGCTCACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCTTCTGCAGCTCCATCTaGTCTCTGTTCGCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: LPTWGLTFRFLRTELLGSFCSSI*SLFAGR
Trigger: TCTGCCAGCGAACAGAGACAAGATGGAGCTGCAGAA...GCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAGCCCCCAAGTCGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp TCCCACTTAGATTCAGCTCTTCCAGCTGCTCCAGTTTATTTAGCTTaGTTGCAGGGAAGGTCTGGAGCTGGTTGTTTGCAAGGTGCAGAA +
Preference number: 5 (lower is better)
Translates to: SHLDSALPAAPVYLA*LQGRSGAGCLQGAE
Trigger: TTCTGCACCTTGCAAACAACCAGCTCCAGACCTTCCCTGCAAGCAAGCTAAATAAACTGGAGCAGCTGGAAGAGCTGAATCTAAGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 90 bp ACTTTAGAAAGAGGTACTGGCTTCCCACCTCGGCACAGGACAGCTTaGCACATGCCAACATTGGCTACAGTCAAGCTAAAGCTACTTGTT +
Preference number: 5 (lower is better)
Translates to: TLERGTGFPPRHRTA*HMPTLATVKLKLLV
Trigger: AACAAGTAGCTTTAGCTTGACTGTAGCCAATGTTGGCATGTGCCAAGCTGTCCTGTGCCGAGGTGGGAAGCCAGTACCTCTTTCTAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp AACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTGCTTTGTATTTCCAGCTTTTTaGCTTCACAGGCCCAGTCAG +
Preference number: 5 (lower is better)
Translates to: NPVHMSTGPLRTELSVCFVFPAF*LHRPSQ
Trigger: CTGACTGGGCCTGTGAAGCAAAAAAGCTGGAAATAC...AAAGCAGACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp AACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTGCTTTGTTTATTTAGCTTGCTaGCAGGGAAGGTCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: NPVHMSTGPLRTELSVCFVYLAC*QGRSGA
Trigger: AGCTCCAGACCTTCCCTGCAAGCAAGCTAAATAAAC...AAAGCAGACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 90 bp CAGAAGGTTGATGTAACTGCAGAGTCTGTGGCTGGCAAAGGCTTCTaGTCAATCTTCAGGGCTGTGATGTGGCTAAACATGTCCAAAGTC +
Preference number: 5 (lower is better)
Translates to: QKVDVTAESVAGKGF*SIFRAVMWLNMSKV
Trigger: GACTTTGGACATGTTTAGCCACATCACAGCCCTGAAGATTGATCAGAAGCCTTTGCCAGCCACAGACTCTGCAGTTACATCAACCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 90 bp ACCTTGTTGTCCTCTGTTATGATGGCTTTCTGGTCTTTCACCCTCTaGGCCTCCTCTGGGTCATGCTCCAAGCTGAAGACTTTAGAAAGA +
Preference number: 5 (lower is better)
Translates to: TLLSSVMMAFWSFTL*ASSGSCSKLKTLER
Trigger: TCTTTCTAAAGTCTTCAGCTTGGAGCATGACCCAGAGGAGGCTCAGAGGGTGAAAGACCAGAAAGCCATCATAACAGAGGACAACAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp TTGGAGAGTTTCTTTCCATACAGACAAGAAGTGGAGGGAGACTTCTaGAGCTCCATCTTGTCTCTGTTCGCTGGCAGAAGTATACCACTG +
Preference number: 5 (lower is better)
Translates to: LESFFPYRQEVEGDF*SSILSLFAGRSIPL
Trigger: CAGTGGTATACTTCTGCCAGCGAACAGAGACAAGATGGAGCTGCAGAAGTCTCCCTCCACTTCTTGTCTGTATGGAAAGAAACTCTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp AACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCTGCTTTGTTCAGGCCCTTCAGTaGAGAAAATTTGTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: NPVHMSTGPLRTELSVCFVQALQ*RKFVEC
Trigger: ACACTCCACAAATTTTCTCAACTGAAGGGCCTGAAC...AAAGCAGACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATCTCAGATCCACGTGCTaGACCTGGCTCATCCTGGTC +
Preference number: 5 (lower is better)
Translates to: QITSLLQEACITFWEMDYLRSTC*TWLILV
Trigger: GACCAGGATGAGCCAGGTCAAGCACGTGGATCTGAG...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp ATAAGTCACCTGCTTGATTGGTTCTGTATCTCCAGTAGACATTTGATAGGCTGTCTCAGATCCACGTGCTaGACCTGGCTCATCCTGGTC +
Preference number: 5 (lower is better)
Translates to: ISHLLDWFCISSRHLIGCLRSTC*TWLILV
Trigger: GACCAGGATGAGCCAGGTCAAGCACGTGGATCTGAG...ACAGCCTATCAAATGTCTACTGGAGATACAGAACCAATCAAGCAGGTGACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp ACCACTAACCCTGTGCACATGAGCACAGGGCCTCTGAGGACAGAATTATCTGTCGTTCCAGGACCAGATTaGTATTTCCTGTCAGATCAA +
Preference number: 5 (lower is better)
Translates to: TTNPVHMSTGPLRTELSVVPGPD*YFLSDQ
Trigger: TTGATCTGACAGGAAATACAAATCTGGTCCTGGAAC...GACAGATAATTCTGTCCTCAGAGGCCCTGTGCTCATGTGCACAGGGTTAGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp ACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATTGGCTTGGGAGTATCCTaGAGGGCTGCAGTTGAAGCA +
Preference number: 5 (lower is better)
Translates to: TQQYSEGHSAKQHTHYNIGLGVS*RAAVEA
Trigger: TGCTTCAACTGCAGCCCTCAAGGATACTCCCAAGCC...AATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp ACCACACCCAACAGCCGAGTGCTCTTTCTTCAGAAATCCTGTTTGTTTGGTTTTTTCTGCAGCTCCATCTaGTCTCTGTTCGCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: TTPNSRVLFLQKSCLFGFFCSSI*SLFAGR
Trigger: TCTGCCAGCGAACAGAGACAAGATGGAGCTGCAGAA...AAAACCAAACAAACAGGATTTCTGAAGAAAGAGCACTCGGCTGTTGGGTGTGGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 90 bp GGAAACAGTCCAAGTTTATTATGGGACAAGTTCAGGCCCTTCAGTTaGGAAAATTTGTGGAGTGTGTCAAGGCCCCCTGGTCTTTCTAGC +
Preference number: 5 (lower is better)
Translates to: GNSPSLLWDKFRPFS*ENLWSVSRPPGLSS
Trigger: GCTAGAAAGACCAGGGGGCCTTGACACACTCCACAAATTTTCTCAACTGAAGGGCCTGAACTTGTCCCATAATAAACTTGGACTGTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp TTGCCGACTTGGGGGCTCACGTTCAGATTCTTGAGAACTGAATTATTAGGCAGCGTTCAGGCCCTTCAGTaGAGAAAATTTGTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: LPTWGLTFRFLRTELLGSVQALQ*RKFVEC
Trigger: ACACTCCACAAATTTTCTCAACTGAAGGGCCTGAAC...GCTGCCTAATAATTCAGTTCTCAAGAATCTGAACGTGAGCCCCCAAGTCGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp TTCTGTCCACCAGGGATTGAGTTCACTGATTATTGCACGTGTATACTCCACAGTAAGGTCTGGAGCTGGTaGTTTGCAAGGTGCAGAACT +
Preference number: 5 (lower is better)
Translates to: FCPPGIEFTDYCTCILHSKVWSW*FARCRT
Trigger: AGTTCTGCACCTTGCAAACAACCAGCTCCAGACCTT...ACTGTGGAGTATACACGTGCAATAATCAGTGAACTCAATCCCTGGTGGACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp GACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATAAGGTCTGGAGCTGGTaGTTTGCAAGGTGCAGAACT +
Preference number: 5 (lower is better)
Translates to: DSAIFRRAQCQTTHSLQHKVWSW*FARCRT
Trigger: AGTTCTGCACCTTGCAAACAACCAGCTCCAGACCTT...ATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATGGCTTGGGAGTATCCTaGAGGGCTGCAGTTGAAGCA +
Preference number: 5 (lower is better)
Translates to: QITSLLQEACITFWEMDYGLGVS*RAAVEA
Trigger: TGCTTCAACTGCAGCCCTCAAGGATACTCCCAAGCC...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp ACCACACCCAACAGCCGAGTGCTCTTTCTTCAGAAATCCTGTTTGTTTGGTTTTGTATTTCCAGCTTTTTaGCTTCACAGGCCCAGTCAG +
Preference number: 5 (lower is better)
Translates to: TTPNSRVLFLQKSCLFGFVFPAF*LHRPSQ
Trigger: CTGACTGGGCCTGTGAAGCAAAAAAGCTGGAAATAC...AAAACCAAACAAACAGGATTTCTGAAGAAAGAGCACTCGGCTGTTGGGTGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAAGGGAAGATGCTGATGTaGTTGGCATGGGCGACAAGG +
Preference number: 5 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQGKMLM*LAWATR
Trigger: CCTTGTCGCCCATGCCAACAACATCAGCATCTTCCC...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp TTCTGTCCACCAGGGATTGAGTTCACTGATTATTGCACGTGTATACTCCACAGTTGGCACATGCCAACATaGGCTACAGTCAAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: FCPPGIEFTDYCTCILHSWHMPT*ATVKLK
Trigger: CTTTAGCTTGACTGTAGCCAATGTTGGCATGTGCCA...ACTGTGGAGTATACACGTGCAATAATCAGTGAACTCAATCCCTGGTGGACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 90 bp AGCTGCTCCAAGCTACATAAGGAGCTAAGGTCCAAATCAGTCAACTaGTTGTCCCGCAAATCCATGTGCGTGATATGTTTATTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: SCSKLHKELRSKSVN*LSRKSMCVICLFPS
Trigger: GGAAGGAAATAAACATATCACGCACATGGATTTGCGGGACAATCAGTTGACTGATTTGGACCTTAGCTCCTTATGTAGCTTGGAGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp GATACCAAGAAGGTATTGGTCATGAAAACTGTGTCATTTGTTGAGTaGTGTACTTCTTCCAAAAGCACATCTGCCATTGTACACTGCAGC +
Preference number: 5 (lower is better)
Translates to: DTKKVLVMKTVSFVE*CTSSKSTSAIVHCS
Trigger: GCTGCAGTGTACAATGGCAGATGTGCTTTTGGAAGAAGTACAGCACTCAACAAATGACACAGTTTTCATGACCAATACCTTCTTGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 90 bp CTCTTTCTCGGGAACCAAACCTACTTCTTCTATTCAAACAAGTTCTaGTCCCATTGTGTTTCATATTTCTCTTTAGGACCCGAATCCCTC +
Preference number: 5 (lower is better)
Translates to: LFLGNQTYFFYSNKF*SHCVSYFSLGPESL
Trigger: GAGGGATTCGGGTCCTAAAGAGAAATATGAAACACAATGGGAGCAGAACTTGTTTGAATAGAAGAAGTAGGTTTGGTTCCCGAGAAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATAGGACTCCAGACTATTaGCAGATGCATTCAAGTACC +
Preference number: 5 (lower is better)
Translates to: QITSLLQEACITFWEMDYRTPDY*QMHSST
Trigger: GGTACTTGAATGCATCTGCAAATAGTCTGGAGTCCT...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp ACCACACCCAACAGCCGAGTGCTCTTTCTTCAGAAATCCTGTTTGTTTGGTTTTGATACCAAGAAGGTATaGGTCATGAAAACTGTGTCA +
Preference number: 5 (lower is better)
Translates to: TTPNSRVLFLQKSCLFGFDTKKV*VMKTVS
Trigger: TGACACAGTTTTCATGACCAATACCTTCTTGGTATC...AAAACCAAACAAACAGGATTTCTGAAGAAAGAGCACTCGGCTGTTGGGTGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATAGAAGTATACCACTGTaGACACTGTTCTGTCTTCGG +
Preference number: 5 (lower is better)
Translates to: QITSLLQEACITFWEMDYRSIPL*TLFCLR
Trigger: CCGAAGACAGAACAGTGTCAACAGTGGTATACTTCT...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAAGGCACAATGGAGCCATaGGAGAGTTTCTTTCCATAC +
Preference number: 5 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQGTMEP*ESFFPY
Trigger: GTATGGAAAGAAACTCTCCAATGGCTCCATTGTGCC...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 90 bp GTGAGATACCAAGAAGGTATTGGTCATGAAAACTGTGTCATTTGTTaGGTGCTGTACTTCTTCCAAAAGCACATCTGCCATTGTACACTG +
Preference number: 5 (lower is better)
Translates to: VRYQEGIGHENCVIC*VLYFFQKHICHCTL
Trigger: CAGTGTACAATGGCAGATGTGCTTTTGGAAGAAGTACAGCACTCAACAAATGACACAGTTTTCATGACCAATACCTTCTTGGTATCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp AATTACAAAACCAGAACCATCCATTTTGGTTTGGCCTACACTGAGGTTTCTCAAAGGACTCCAGACTATTaGCAGATGCATTCAAGTACC +
Preference number: 5 (lower is better)
Translates to: NYKTRTIHFGLAYTEVSQRTPDY*QMHSST
Trigger: GGTACTTGAATGCATCTGCAAATAGTCTGGAGTCCT...TTGAGAAACCTCAGTGTAGGCCAAACCAAAATGGATGGTTCTGGTTTTGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp ACTCAGCAATATTCAGAAGGGCACAGTGCCAAACAACACACTCACTACAACATTATTTCTGTCAAGTCATaGCAACTCAGGTCTACAAAC +
Preference number: 5 (lower is better)
Translates to: TQQYSEGHSAKQHTHYNIISVKS*QLRSTN
Trigger: GTTTGTAGACCTGAGTTGCAATGACTTGACAGAAAT...AATGTTGTAGTGAGTGTGTTGTTTGGCACTGTGCCCTTCTGAATATTGCTGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 90 bp CAGCCATTCCTAATTTCCTGTGAGATACCAAGAAGGTATTGGTCATaGAAACTGTGTCATTTGTTGAGTGCTGTACTTCTTCCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: QPFLISCEIPRRYWS*KLCHLLSAVLLPKA
Trigger: TGCTTTTGGAAGAAGTACAGCACTCAACAAATGACACAGTTTTCATGACCAATACCTTCTTGGTATCTCACAGGAAATTAGGAATGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS-3UTR CAA 90 bp CAAATCACCTCACTGTTACAAGAGGCGTGTATTACGTTTTGGGAAATGGACTATATTTACCAATCTGACTaGGCAAGTCATGAAATCCAT +
Preference number: 5 (lower is better)
Translates to: QITSLLQEACITFWEMDYIYQSD*ASHEIH
Trigger: ATGGATTTCATGACTTGCCAAGTCAGATTGGTAAAT...ATAGTCCATTTCCCAAAACGTAATACACGCCTCTTGTAACAGTGAGGTGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp TGCGGAGGACGCTGGGTGCAGACTGCAGCGCCTCTCTaGCCTGGGCAGCAAGCTCGCCTCCAGGCCCACAGT +
Preference number: 6 (lower is better)
Translates to: CGGRWVQTAAPL*PGQQARLQAHS
Trigger: ACTGTGGGCCTGGAGGCGAGCTTGCTGCCCAGGCCAGAGAGGCGCTGCAGTCTGCACCCAGCGTCCTCCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp AGAAGGCTGGCGCTGGAACACCCCTGCGGAGGACGCTaGGTGCAGACTGCAGCGCCTCTCTGGCCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: RRLALEHPCGGR*VQTAAPLWPGQ
Trigger: CTGCCCAGGCCAGAGAGGCGCTGCAGTCTGCACCCAGCGTCCTCCGCAGGGGTGTTCCAGCGCCAGCCTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 72 bp GGCCTGGGCAGCAAGCTCGCCTCCAGGCCCACAGTGTaGTGCTCATCCGAGGCCGTGGAGCCCACTTCACTG +
Preference number: 6 (lower is better)
Translates to: GLGSKLASRPTV*CSSEAVEPTSL
Trigger: CAGTGAAGTGGGCTCCACGGCCTCGGATGAGCACAACACTGTGGGCCTGGAGGCGAGCTTGCTGCCCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 90 bp CGCCTCTCTGGCCTGGGCAGCAAGCTCGCCTCCAGGCCCACAGTGTaGTGCTCATCCGAGGCCGTGGAGCCCACTTCACTGCTCACCTCT +
Preference number: 6 (lower is better)
Translates to: RLSGLGSKLASRPTV*CSSEAVEPTSLLTS
Trigger: AGAGGTGAGCAGTGAAGTGGGCTCCACGGCCTCGGATGAGCACAACACTGTGGGCCTGGAGGCGAGCTTGCTGCCCAGGCCAGAGAGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 72 bp CTGGGCAGCAAGCTCGCCTCCAGGCCCACAGTGTTGTaGTCATCCGAGGCCGTGGAGCCCACTTCACTGCTC +
Preference number: 6 (lower is better)
Translates to: LGSKLASRPTVL*SSEAVEPTSLL
Trigger: GAGCAGTGAAGTGGGCTCCACGGCCTCGGATGAGCACAACACTGTGGGCCTGGAGGCGAGCTTGCTGCCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 72 bp TCGGATCCCAAACCCCGCCCCTCTAGCACGCTCCTCTaGACAGGCGTTGGAAGAGTTCTTCGGGAGCGGAGG +
Preference number: 6 (lower is better)
Translates to: SDPKPRPSSTLL*TGVGRVLRERR
Trigger: CCTCCGCTCCCGAAGAACTCTTCCAACGCCTGTTCAGAGGAGCGTGCTAGAGGGGCGGGGTTTGGGATCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 72 bp AAAAGTAGCACAAGAAGGCTGGCGCTGGAACACCCCTaGGGAGGACGCTGGGTGCAGACTGCAGCGCCTCTC +
Preference number: 6 (lower is better)
Translates to: KSSTRRLALEHP*GGRWVQTAAPL
Trigger: GAGAGGCGCTGCAGTCTGCACCCAGCGTCCTCCGCAGGGGTGTTCCAGCGCCAGCCTTCTTGTGCTACTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp CAGAGAAGTGAGCTGCCGCAGGTTTCCCAACTCATCTaGCAGAGCCGTGAGGCCGTTGCCGTCGAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: QRSELPQVSQLI*QSREAVAVEAE
Trigger: CTCAGCCTCGACGGCAACGGCCTCACGGCTCTGCCAGATGAGTTGGGAAACCTGCGGCAGCTCACTTCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 72 bp TCCAACTGGCGTAGAGGGTTCGAAGGGAGAAGCCGCTaGGTGTCAGCTCCCTCAGCTGGTTCCGCTCACAGT +
Preference number: 6 (lower is better)
Translates to: SNWRRGFEGRSR*VSAPSAGSAHS
Trigger: ACTGTGAGCGGAACCAGCTGAGGGAGCTGACACTCAGCGGCTTCTCCCTTCGAACCCTCTACGCCAGTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 72 bp CAGATCCACGTGCTTGACCTGGCTCATCCTGGTCAGTaGCCCCAGGTTCAGGACCTCCAAACGGTTTCCTGC +
Preference number: 6 (lower is better)
Translates to: QIHVLDLAHPGQ*PQVQDLQTVSC
Trigger: GCAGGAAACCGTTTGGAGGTCCTGAACCTGGGGGCACTGACCAGGATGAGCCAGGTCAAGCACGTGGATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp CGAAGGGAGAAGCCGCTGAGTGTCAGCTCCCTCAGCTaGTTCCGCTCACAGTGCAGCTGCTCCAAGCTACAT +
Preference number: 6 (lower is better)
Translates to: RREKPLSVSSLS*FRSQCSCSKLH
Trigger: ATGTAGCTTGGAGCAGCTGCACTGTGAGCGGAACCAGCTGAGGGAGCTGACACTCAGCGGCTTCTCCCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp GGAGGGGAGCTCTCTGGCTCTCTGCCTCGGCAGCAATaGATGTCTACCTCTACTTCAACCCTGCTGCCGTTG +
Preference number: 6 (lower is better)
Translates to: GGELSGSLPRQQ*MSTSTSTLLPL
Trigger: CAACGGCAGCAGGGTTGAAGTAGAGGTAGACATCCATTGCTGCCGAGGCAGAGAGCCAGAGAGCTCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp GTTGGAAGAGTTCTTCGGGAGCGGAGGGGAGCTCTCTaGCTCTCTGCCTCGGCAGCAATGGATGTCTACCTC +
Preference number: 6 (lower is better)
Translates to: VGRVLRERRGAL*LSASAAMDVYL
Trigger: GAGGTAGACATCCATTGCTGCCGAGGCAGAGAGCCAGAGAGCTCCCCTCCGCTCCCGAAGAACTCTTCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 72 bp GCTTGGGCTCCAGCTGAGCTGAAAGCAAGGGAGTGCTaGCGGCGCTTCACTTCTTCTATCTTTCCCCCAACC +
Preference number: 6 (lower is better)
Translates to: AWAPAELKAREC*RRFTSSIFPPT
Trigger: GGTTGGGGGAAAGATAGAAGAAGTGAAGCGCCGGCAGCACTCCCTTGCTTTCAGCTCAGCTGGAGCCCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp AAGAGCGTGTCCGGCAGCCTGGAGAGAGTGTTATGCTaGATATCCAGGACCTCGAGGGGAATGTGCTCCACC +
Preference number: 6 (lower is better)
Translates to: KSVSGSLERVLC*ISRTSRGMCST
Trigger: GGTGGAGCACATTCCCCTCGAGGTCCTGGATATCCAGCATAACACTCTCTCCAGGCTGCCGGACACGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 90 bp CTGAACTCGGAGGCAATCCCACTACTGGAGGAGGGAGTGGTTGGCTaGGGAGTATCCTTGAGGGCTGCAGTTGAAGCAAATCCCACAGGG +
Preference number: 6 (lower is better)
Translates to: LNSEAIPLLEEGVVG*GVSLRAAVEANPTG
Trigger: CCCTGTGGGATTTGCTTCAACTGCAGCCCTCAAGGATACTCCCAAGCCAACCACTCCCTCCTCCAGTAGTGGGATTGCCTCCGAGTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 72 bp TACTGGAGGAGGGAGTGGTTGGCTTGGGAGTATCCTTaGGGGCTGCAGTTGAAGCAAATCCCACAGGGCCTG +
Preference number: 6 (lower is better)
Translates to: YWRREWLAWEYP*GLQLKQIPQGL
Trigger: CAGGCCCTGTGGGATTTGCTTCAACTGCAGCCCTCAAGGATACTCCCAAGCCAACCACTCCCTCCTCCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 72 bp CTTCACTGCTCACCTCTGAGGTGGACATCTCACTGCTaGACTCGGAGGCAATCCCACTACTGGAGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: LHCSPLRWTSHC*TRRQSHYWRRE
Trigger: CTCCCTCCTCCAGTAGTGGGATTGCCTCCGAGTTCAGCAGTGAGATGTCCACCTCAGAGGTGAGCAGTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 72 bp CTCATCCGCTGCGACACCACCTTAGACGCCTGCCGTTaGCATCTCTGGTACTCAGCCAAAGTCTCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: LIRCDTTLDACR*HLWYSAKVSKL
Trigger: CAGCTTTGAGACTTTGGCTGAGTACCAGAGATGGCAACGGCAGGCGTCTAAGGTGGTGTCGCAGCGGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 72 bp CTGAGTGTCAGCTCCCTCAGCTGGTTCCGCTCACAGTaGAGCTGCTCCAAGCTACATAAGGAGCTAAGGTCC +
Preference number: 6 (lower is better)
Translates to: LSVSSLSWFRSQ*SCSKLHKELRS
Trigger: GGACCTTAGCTCCTTATGTAGCTTGGAGCAGCTGCACTGTGAGCGGAACCAGCTGAGGGAGCTGACACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 72 bp AGTTCTTCGGGAGCGGAGGGGAGCTCTCTGGCTCTCTaGCTCGGCAGCAATGGATGTCTACCTCTACTTCAA +
Preference number: 6 (lower is better)
Translates to: SSSGAEGSSLAL*LGSNGCLPLLQ
Trigger: TTGAAGTAGAGGTAGACATCCATTGCTGCCGAGGCAGAGAGCCAGAGAGCTCCCCTCCGCTCCCGAAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp TTCAAGTGGTTCATCCTCAGATCCACGTGCTTGACCTaGCTCATCCTGGTCAGTGCCCCCAGGTTCAGGACC +
Preference number: 6 (lower is better)
Translates to: FKWFILRSTCLT*LILVSAPRFRT
Trigger: GGTCCTGAACCTGGGGGCACTGACCAGGATGAGCCAGGTCAAGCACGTGGATCTGAGGATGAACCACTTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 72 bp GCTCATCCGCTGCGACACCACCTTAGACGCCTGCCGTaGCCATCTCTGGTACTCAGCCAAAGTCTCAAAGCT +
Preference number: 6 (lower is better)
Translates to: AHPLRHHLRRLP*PSLVLSQSLKA
Trigger: AGCTTTGAGACTTTGGCTGAGTACCAGAGATGGCAACGGCAGGCGTCTAAGGTGGTGTCGCAGCGGATGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 72 bp GAAGAGATGCTCAGGAACCTCTTCAAGGCTGTAGCATaGGAGGTCCACAGTGCTCATCCGCTGCGACACCAC +
Preference number: 6 (lower is better)
Translates to: EEMLRNLFKAVA*EVHSAHPLRHH
Trigger: GTGGTGTCGCAGCGGATGAGCACTGTGGACCTCTCATGCTACAGCCTTGAAGAGGTTCCTGAGCATCTCTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 72 bp CCGTTTTCAAGTGGTTCATCCTCAGATCCACGTGCTTaGCCTGGCTCATCCTGGTCAGTGCCCCCAGGTTCA +
Preference number: 6 (lower is better)
Translates to: PFSSGSSSDPRA*PGSSWSVPPGS
Trigger: TGAACCTGGGGGCACTGACCAGGATGAGCCAGGTCAAGCACGTGGATCTGAGGATGAACCACTTGAAAACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 72 bp ATCACCGTTTTCAAGTGGTTCATCCTCAGATCCACGTaGTTGACCTGGCTCATCCTGGTCAGTGCCCCCAGG +
Preference number: 6 (lower is better)
Translates to: ITVFKWFILRST*LTWLILVSAPR
Trigger: CCTGGGGGCACTGACCAGGATGAGCCAGGTCAAGCACGTGGATCTGAGGATGAACCACTTGAAAACGGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp TTGGGAGAGCTCCAAAGAAGTGAGCAGGCTGGGCACTaGGTACACATTCACTGCCGTCAGCCTGTTCCAACT +
Preference number: 6 (lower is better)
Translates to: LGELQRSEQAGH*VHIHCRQPVPT
Trigger: AGTTGGAACAGGCTGACGGCAGTGAATGTGTACCCAGTGCCCAGCCTGCTCACTTCTTTGGAGCTCTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp GTGCAGAACTCGCAGGTGTGGGTGCCCGACCAAAACTaGTATGCACTGATCTGTCAGAAGGTTGCTGGTCAG +
Preference number: 6 (lower is better)
Translates to: VQNSQVWVPDQN*YALICQKVAGQ
Trigger: CTGACCAGCAACCTTCTGACAGATCAGTGCATACCAGTTTTGGTCGGGCACCCACACCTGCGAGTTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 72 bp ACCGTTTTCAAGTGGTTCATCCTCAGATCCACGTGCTaGACCTGGCTCATCCTGGTCAGTGCCCCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: TVFKWFILRSTC*TWLILVSAPRF
Trigger: GAACCTGGGGGCACTGACCAGGATGAGCCAGGTCAAGCACGTGGATCTGAGGATGAACCACTTGAAAACGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 90 bp GTCCACAGTGCTCATCCGCTGCGACACCACCTTAGACGCCTGCCGTaGCCATCTCTGGTACTCAGCCAAAGTCTCAAAGCTGACATGATA +
Preference number: 6 (lower is better)
Translates to: VHSAHPLRHHLRRLP*PSLVLSQSLKADMI
Trigger: TATCATGTCAGCTTTGAGACTTTGGCTGAGTACCAGAGATGGCAACGGCAGGCGTCTAAGGTGGTGTCGCAGCGGATGAGCACTGTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 90 bp TCAGTAATCACCGTTTTCAAGTGGTTCATCCTCAGATCCACGTGCTaGACCTGGCTCATCCTGGTCAGTGCCCCCAGGTTCAGGACCTCC +
Preference number: 6 (lower is better)
Translates to: SVITVFKWFILRSTC*TWLILVSAPRFRTS
Trigger: GGAGGTCCTGAACCTGGGGGCACTGACCAGGATGAGCCAGGTCAAGCACGTGGATCTGAGGATGAACCACTTGAAAACGGTGATTACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 90 bp ACTGGCTTCCCACCTCGGCACAGGACAGCTTGGCACATGCCAACATaGGCTACAGTCAAGCTAAAGCTACTTGTTGGGTCGGCAGTGTCA +
Preference number: 6 (lower is better)
Translates to: TGFPPRHRTAWHMPT*ATVKLKLLVGSAVS
Trigger: TGACACTGCCGACCCAACAAGTAGCTTTAGCTTGACTGTAGCCAATGTTGGCATGTGCCAAGCTGTCCTGTGCCGAGGTGGGAAGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 72 bp GAACTCGCAGGTGTGGGTGCCCGACCAAAACTGGTATaGACTGATCTGTCAGAAGGTTGCTGGTCAGGTACA +
Preference number: 6 (lower is better)
Translates to: ELAGVGARPKLV*TDLSEGCWSGT
Trigger: TGTACCTGACCAGCAACCTTCTGACAGATCAGTGCATACCAGTTTTGGTCGGGCACCCACACCTGCGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 72 bp CCCATCAAACATGCCGTAGACAGCTCCCACACCCTCTaGAAAGTTATCCATAGCCAGGGCAGACACACAGAG +
Preference number: 6 (lower is better)
Translates to: PIKHAVDSSHTL*KVIHSQGRHTE
Trigger: CTCTGTGTGTCTGCCCTGGCTATGGATAACTTTGCAGAGGGTGTGGGAGCTGTCTACGGCATGTTTGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp GATTTAAGGCCTTGGAGAAGAGCGTGTCCGGCAGCCTaGAGAGAGTGTTATGCTGGATATCCAGGACCTCGA +
Preference number: 6 (lower is better)
Translates to: DLRPWRRACPAA*RECYAGYPGPR
Trigger: TCGAGGTCCTGGATATCCAGCATAACACTCTCTCCAGGCTGCCGGACACGCTCTTCTCCAAGGCCTTAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp GAGCTGGTTGTTTGCAAGGTGCAGAACTCGCAGGTGTaGGTGCCCGACCAAAACTGGTATGCACTGATCTGT +
Preference number: 6 (lower is better)
Translates to: ELVVCKVQNSQV*VPDQNWYALIC
Trigger: ACAGATCAGTGCATACCAGTTTTGGTCGGGCACCCACACCTGCGAGTTCTGCACCTTGCAAACAACCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp AGTTTATTCCTCTGCCCTGCCATCTCGGCCAGGCCATaGCTCCAGAAGGTTGATGTAACTGCAGAGTCTGTG +
Preference number: 6 (lower is better)
Translates to: SLFLCPAISARP*LQKVDVTAESV
Trigger: CACAGACTCTGCAGTTACATCAACCTTCTGGAGCCATGGCCTGGCCGAGATGGCAGGGCAGAGGAATAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp AGAGGTACTGGCTTCCCACCTCGGCACAGGACAGCTTaGCACATGCCAACATTGGCTACAGTCAAGCTAAAG +
Preference number: 6 (lower is better)
Translates to: RGTGFPPRHRTA*HMPTLATVKLK
Trigger: CTTTAGCTTGACTGTAGCCAATGTTGGCATGTGCCAAGCTGTCCTGTGCCGAGGTGGGAAGCCAGTACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 72 bp CCACCTCGGCACAGGACAGCTTGGCACATGCCAACATaGGCTACAGTCAAGCTAAAGCTACTTGTTGGGTCG +
Preference number: 6 (lower is better)
Translates to: PPRHRTAWHMPT*ATVKLKLLVGS
Trigger: CGACCCAACAAGTAGCTTTAGCTTGACTGTAGCCAATGTTGGCATGTGCCAAGCTGTCCTGTGCCGAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 72 bp GAGGCAATCCCACTACTGGAGGAGGGAGTGGTTGGCTaGGGAGTATCCTTGAGGGCTGCAGTTGAAGCAAAT +
Preference number: 6 (lower is better)
Translates to: EAIPLLEEGVVG*GVSLRAAVEAN
Trigger: ATTTGCTTCAACTGCAGCCCTCAAGGATACTCCCAAGCCAACCACTCCCTCCTCCAGTAGTGGGATTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 90 bp TGCTCCAGTTTATTTAGCTTGCTTGCAGGGAAGGTCTGGAGCTGGTaGTTTGCAAGGTGCAGAACTCGCAGGTGTGGGTGCCCGACCAAA +
Preference number: 6 (lower is better)
Translates to: CSSLFSLLAGKVWSW*FARCRTRRCGCPTK
Trigger: TTTGGTCGGGCACCCACACCTGCGAGTTCTGCACCTTGCAAACAACCAGCTCCAGACCTTCCCTGCAAGCAAGCTAAATAAACTGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 90 bp TGCAGCTCCATCTTGTCTCTGTTCGCTGGCAGAAGTATACCACTGTaGACACTGTTCTGTCTTCGGATCCCAAACCCCGCCCCTCTAGCA +
Preference number: 6 (lower is better)
Translates to: CSSILSLFAGRSIPL*TLFCLRIPNPAPLA
Trigger: TGCTAGAGGGGCGGGGTTTGGGATCCGAAGACAGAACAGTGTCAACAGTGGTATACTTCTGCCAGCGAACAGAGACAAGATGGAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp GTCATGCTCCAAGCTGAAGACTTTAGAAAGAGGTACTaGCTTCCCACCTCGGCACAGGACAGCTTGGCACAT +
Preference number: 6 (lower is better)
Translates to: VMLQAEDFRKRY*LPTSAQDSLAH
Trigger: ATGTGCCAAGCTGTCCTGTGCCGAGGTGGGAAGCCAGTACCTCTTTCTAAAGTCTTCAGCTTGGAGCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 72 bp AAGAGGTACTGGCTTCCCACCTCGGCACAGGACAGCTaGGCACATGCCAACATTGGCTACAGTCAAGCTAAA +
Preference number: 6 (lower is better)
Translates to: KRYWLPTSAQDS*AHANIGYSQAK
Trigger: TTTAGCTTGACTGTAGCCAATGTTGGCATGTGCCAAGCTGTCCTGTGCCGAGGTGGGAAGCCAGTACCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp TGCTCCAGTTTATTTAGCTTGCTTGCAGGGAAGGTCTaGAGCTGGTTGTTTGCAAGGTGCAGAACTCGCAGG +
Preference number: 6 (lower is better)
Translates to: CSSLFSLLAGKV*SWLFARCRTRR
Trigger: CCTGCGAGTTCTGCACCTTGCAAACAACCAGCTCCAGACCTTCCCTGCAAGCAAGCTAAATAAACTGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 72 bp TTTGCAGATGCATTCAAGTACCTGAGATTTAAGGCCTaGGAGAAGAGCGTGTCCGGCAGCCTGGAGAGAGTG +
Preference number: 6 (lower is better)
Translates to: FADAFKYLRFKA*EKSVSGSLERV
Trigger: CACTCTCTCCAGGCTGCCGGACACGCTCTTCTCCAAGGCCTTAAATCTCAGGTACTTGAATGCATCTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 72 bp TTGGCATGGGCGACAAGGGTGTGCAGCCTTTTGCAGTaGGCTATGGTTGTGGGGATAGCTGTAAGTTTGTTC +
Preference number: 6 (lower is better)
Translates to: LAWATRVCSLLQ*AMVVGIAVSLF
Trigger: GAACAAACTTACAGCTATCCCCACAACCATAGCCAACTGCAAAAGGCTGCACACCCTTGTCGCCCATGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 72 bp ATGTTGTTGGCATGGGCGACAAGGGTGTGCAGCCTTTaGCAGTTGGCTATGGTTGTGGGGATAGCTGTAAGT +
Preference number: 6 (lower is better)
Translates to: MLLAWATRVCSL*QLAMVVGIAVS
Trigger: ACTTACAGCTATCCCCACAACCATAGCCAACTGCAAAAGGCTGCACACCCTTGTCGCCCATGCCAACAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 72 bp ATCTTGTCTCTGTTCGCTGGCAGAAGTATACCACTGTaGACACTGTTCTGTCTTCGGATCCCAAACCCCGCC +
Preference number: 6 (lower is better)
Translates to: ILSLFAGRSIPL*TLFCLRIPNPA
Trigger: GGCGGGGTTTGGGATCCGAAGACAGAACAGTGTCAACAGTGGTATACTTCTGCCAGCGAACAGAGACAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 90 bp TCCAGACTATTTGCAGATGCATTCAAGTACCTGAGATTTAAGGCCTaGGAGAAGAGCGTGTCCGGCAGCCTGGAGAGAGTGTTATGCTGG +
Preference number: 6 (lower is better)
Translates to: SRLFADAFKYLRFKA*EKSVSGSLERVLCW
Trigger: CCAGCATAACACTCTCTCCAGGCTGCCGGACACGCTCTTCTCCAAGGCCTTAAATCTCAGGTACTTGAATGCATCTGCAAATAGTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 90 bp CTGATGTTGTTGGCATGGGCGACAAGGGTGTGCAGCCTTTTGCAGTaGGCTATGGTTGTGGGGATAGCTGTAAGTTTGTTCCCACTTAGA +
Preference number: 6 (lower is better)
Translates to: LMLLAWATRVCSLLQ*AMVVGIAVSLFPLR
Trigger: TCTAAGTGGGAACAAACTTACAGCTATCCCCACAACCATAGCCAACTGCAAAAGGCTGCACACCCTTGTCGCCCATGCCAACAACATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 90 bp AAGATGCTGATGTTGTTGGCATGGGCGACAAGGGTGTGCAGCCTTTaGCAGTTGGCTATGGTTGTGGGGATAGCTGTAAGTTTGTTCCCA +
Preference number: 6 (lower is better)
Translates to: KMLMLLAWATRVCSL*QLAMVVGIAVSLFP
Trigger: TGGGAACAAACTTACAGCTATCCCCACAACCATAGCCAACTGCAAAAGGCTGCACACCCTTGTCGCCCATGCCAACAACATCAGCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 90 bp GACTTTAGAAAGAGGTACTGGCTTCCCACCTCGGCACAGGACAGCTaGGCACATGCCAACATTGGCTACAGTCAAGCTAAAGCTACTTGT +
Preference number: 6 (lower is better)
Translates to: DFRKRYWLPTSAQDS*AHANIGYSQAKATC
Trigger: ACAAGTAGCTTTAGCTTGACTGTAGCCAATGTTGGCATGTGCCAAGCTGTCCTGTGCCGAGGTGGGAAGCCAGTACCTCTTTCTAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 90 bp ACCTCAATGAGGTTCAGGCTGTCCTCTAGGGGCACAATGGAGCCATaGGAGAGTTTCTTTCCATACAGACAAGAAGTGGAGGGAGACTTC +
Preference number: 6 (lower is better)
Translates to: TSMRFRLSSRGTMEP*ESFFPYRQEVEGDF
Trigger: GAAGTCTCCCTCCACTTCTTGTCTGTATGGAAAGAAACTCTCCAATGGCTCCATTGTGCCCCTAGAGGACAGCCTGAACCTCATTGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 72 bp GGAATGTGCTCCACCAGTGCAGGAAGGACATGGATGTaGTTGTGTCCTACCATCAGTTTCCGAAGACTCAGA +
Preference number: 6 (lower is better)
Translates to: GMCSTSAGRTWM*LCPTISFRRLR
Trigger: TCTGAGTCTTCGGAAACTGATGGTAGGACACAATCACATCCATGTCCTTCCTGCACTGGTGGAGCACATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 72 bp AGCAGGTTACTCCGTTCACCTTGTTGTCCTCTGTTATaGTGGCTTTCTGGTCTTTCACCCTCTGAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: SRLLRSPCCPLL*WLSGLSPSEPP
Trigger: AGGAGGCTCAGAGGGTGAAAGACCAGAAAGCCATCATAACAGAGGACAACAAGGTGAACGGAGTAACCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 72 bp TGTACTTCTTCCAAAAGCACATCTGCCATTGTACACTaGAGCAGACGAGGGAGTTCTTCATTCCGGTCCCCA +
Preference number: 6 (lower is better)
Translates to: CTSSKSTSAIVH*SRRGSSSFRSP
Trigger: TGGGGACCGGAATGAAGAACTCCCTCGTCTGCTGCAGTGTACAATGGCAGATGTGCTTTTGGAAGAAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 72 bp ACAGCCTTCTTCACCAATATTCAAATAAACCACCATTaGCCCCACGTTGTCCTGACAACCGTAGCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: TAFFTNIQINHH*PHVVLTTVALG
Trigger: GCCCAGAGCTACGGTTGTCAGGACAACGTGGGGGCAATGGTGGTTTATTTGAATATTGGTGAAGAAGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp GCCAACATTGGCTACAGTCAAGCTAAAGCTACTTGTTaGGTCGGCAGTGTCAGGTCGAATATAGCACAGGAG +
Preference number: 6 (lower is better)
Translates to: ANIGYSQAKATC*VGSVRSNIAQE
Trigger: CTCCTGTGCTATATTCGACCTGACACTGCCGACCCAACAAGTAGCTTTAGCTTGACTGTAGCCAATGTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 72 bp CAATGGATGTCTACCTCTACTTCAACCCTGCTGCCGTaGGTTATGACTCCTTCAACAGGCTGGTCATCGTCA +
Preference number: 6 (lower is better)
Translates to: QWMSTSTSTLLP*VMTPSTGWSSS
Trigger: TGACGATGACCAGCCTGTTGAAGGAGTCATAACCAACGGCAGCAGGGTTGAAGTAGAGGTAGACATCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 72 bp AGACAAGAAGTGGAGGGAGACTTCTGCAGCTCCATCTaGTCTCTGTTCGCTGGCAGAAGTATACCACTGTTG +
Preference number: 6 (lower is better)
Translates to: RQEVEGDFCSSI*SLFAGRSIPLL
Trigger: CAACAGTGGTATACTTCTGCCAGCGAACAGAGACAAGATGGAGCTGCAGAAGTCTCCCTCCACTTCTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 90 bp CACTTAGATTCAGCTCTTCCAGCTGCTCCAGTTTATTTAGCTTGCTaGCAGGGAAGGTCTGGAGCTGGTTGTTTGCAAGGTGCAGAACTC +
Preference number: 6 (lower is better)
Translates to: HLDSALPAAPVYLAC*QGRSGAGCLQGAEL
Trigger: GAGTTCTGCACCTTGCAAACAACCAGCTCCAGACCTTCCCTGCAAGCAAGCTAAATAAACTGGAGCAGCTGGAAGAGCTGAATCTAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 90 bp TTCCCACTTAGATTCAGCTCTTCCAGCTGCTCCAGTTTATTTAGCTaGCTTGCAGGGAAGGTCTGGAGCTGGTTGTTTGCAAGGTGCAGA +
Preference number: 6 (lower is better)
Translates to: FPLRFSSSSCSSLFS*LAGKVWSWLFARCR
Trigger: TCTGCACCTTGCAAACAACCAGCTCCAGACCTTCCCTGCAAGCAAGCTAAATAAACTGGAGCAGCTGGAAGAGCTGAATCTAAGTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 72 bp GATTCAGCTCTTCCAGCTGCTCCAGTTTATTTAGCTTaGTTGCAGGGAAGGTCTGGAGCTGGTTGTTTGCAA +
Preference number: 6 (lower is better)
Translates to: DSALPAAPVYLA*LQGRSGAGCLQ
Trigger: TTGCAAACAACCAGCTCCAGACCTTCCCTGCAAGCAAGCTAAATAAACTGGAGCAGCTGGAAGAGCTGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 72 bp TTCTTTCCATACAGACAAGAAGTGGAGGGAGACTTCTaGAGCTCCATCTTGTCTCTGTTCGCTGGCAGAAGT +
Preference number: 6 (lower is better)
Translates to: FFPYRQEVEGDF*SSILSLFAGRS
Trigger: ACTTCTGCCAGCGAACAGAGACAAGATGGAGCTGCAGAAGTCTCCCTCCACTTCTTGTCTGTATGGAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 72 bp AGATTCAGCTCTTCCAGCTGCTCCAGTTTATTTAGCTaGCTTGCAGGGAAGGTCTGGAGCTGGTTGTTTGCA +
Preference number: 6 (lower is better)
Translates to: RFSSSSCSSLFS*LAGKVWSWLFA
Trigger: TGCAAACAACCAGCTCCAGACCTTCCCTGCAAGCAAGCTAAATAAACTGGAGCAGCTGGAAGAGCTGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 72 bp TTGCAGTTGGCTATGGTTGTGGGGATAGCTGTAAGTTaGTTCCCACTTAGATTCAGCTCTTCCAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: LQLAMVVGIAVS*FPLRFSSSSCS
Trigger: GGAGCAGCTGGAAGAGCTGAATCTAAGTGGGAACAAACTTACAGCTATCCCCACAACCATAGCCAACTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 90 bp TGTCATTTGTTGAGTGCTGTACTTCTTCCAAAAGCACATCTGCCATaGTACACTGCAGCAGACGAGGGAGTTCTTCATTCCGGTCCCCAT +
Preference number: 6 (lower is better)
Translates to: CHLLSAVLLPKAHLP*YTAADEGVLHSGPH
Trigger: ATGGGGACCGGAATGAAGAACTCCCTCGTCTGCTGCAGTGTACAATGGCAGATGTGCTTTTGGAAGAAGTACAGCACTCAACAAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 90 bp TTTCCATACAGACAAGAAGTGGAGGGAGACTTCTGCAGCTCCATCTaGTCTCTGTTCGCTGGCAGAAGTATACCACTGTTGACACTGTTC +
Preference number: 6 (lower is better)
Translates to: FPYRQEVEGDFCSSI*SLFAGRSIPLLTLF
Trigger: GAACAGTGTCAACAGTGGTATACTTCTGCCAGCGAACAGAGACAAGATGGAGCTGCAGAAGTCTCCCTCCACTTCTTGTCTGTATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 72 bp CTCCAGCACATATTTCTGACGCTGGTGTCTCTACTGTaGAAAGGACAAGATGTAAATCAGAAGAGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: LQHIFLTLVSLL*KGQDVNQKRRR
Trigger: CCTCCTCCTCTTCTGATTTACATCTTGTCCTTTGCACAGTAGAGACACCAGCGTCAGAAATATGTGCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 72 bp TTGAGTGCTGTACTTCTTCCAAAAGCACATCTGCCATaGTACACTGCAGCAGACGAGGGAGTTCTTCATTCC +
Preference number: 6 (lower is better)
Translates to: LSAVLLPKAHLP*YTAADEGVLHS
Trigger: GGAATGAAGAACTCCCTCGTCTGCTGCAGTGTACAATGGCAGATGTGCTTTTGGAAGAAGTACAGCACTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CAA 90 bp TGCAGCCTTTTGCAGTTGGCTATGGTTGTGGGGATAGCTGTAAGTTaGTTCCCACTTAGATTCAGCTCTTCCAGCTGCTCCAGTTTATTT +
Preference number: 6 (lower is better)
Translates to: CSLLQLAMVVGIAVS*FPLRFSSSSCSSLF
Trigger: AAATAAACTGGAGCAGCTGGAAGAGCTGAATCTAAGTGGGAACAAACTTACAGCTATCCCCACAACCATAGCCAACTGCAAAAGGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS GCA 72 bp GTAAGTTTGTTCCCACTTAGATTCAGCTCTTCCAGCTaGTCCAGTTTATTTAGCTTGCTTGCAGGGAAGGTC +
Preference number: 6 (lower is better)
Translates to: VSLFPLRFSSSS*SSLFSLLAGKV
Trigger: GACCTTCCCTGCAAGCAAGCTAAATAAACTGGAGCAGCTGGAAGAGCTGAATCTAAGTGGGAACAAACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS CCA 72 bp TTTCCTTCCATATTTTCAGTAATCACCGTTTTCAAGTaGTTCATCCTCAGATCCACGTGCTTGACCTGGCTC +
Preference number: 6 (lower is better)
Translates to: FPSIFSVITVFK*FILRSTCLTWL
Trigger: GAGCCAGGTCAAGCACGTGGATCTGAGGATGAACCACTTGAAAACGGTGATTACTGAAAATATGGAAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8
CDS TCA 72 bp CTAATTTCCTGTGAGATACCAAGAAGGTATTGGTCATaGAAACTGTGTCATTTGTTGAGTGCTGTACTTCTT +
Preference number: 6 (lower is better)
Translates to: LISCEIPRRYWS*KLCHLLSAVLL
Trigger: AAGAAGTACAGCACTCAACAAATGACACAGTTTTCATGACCAATACCTTCTTGGTATCTCACAGGAAATTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034175.5
ENSMUST00000179721.8