RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHLPP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000044340

Ensembl transcript IDs: ENSMUST00000061047.7

Found 251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATaGCCCACACTGAAGATGAGCTACGTAGGGGTGGGGCAGGGAGGC +
Preference number: 1 (lower is better)
Translates to: SREQGHIICTETRCT*PTLKMSYVGVGQGG
Trigger: GCCTCCCTGCCCCACCCCTACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
3UTR-3UTR CCA 90 bp ATTATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTAAGCTGCAGAGACAGGTaGGGCAGTGTCTGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: IICTETRCTWPTLKMSYVSCRDR*GSVWER
Trigger: CCTCTCCCAGACACTGCCCCACCTGTCTCTGCAGCT...TACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
3UTR-3UTR TCA 90 bp ATTATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTAACCCCTGGTTTAATGTaGGCCTGGGAGACTCTCAGT +
Preference number: 2 (lower is better)
Translates to: IICTETRCTWPTLKMSYVTPGLM*AWETLS
Trigger: ACTGAGAGTCTCCCAGGCTCACATTAAACCAGGGGT...TACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
3UTR-3UTR TCA 90 bp TGTAGATGGTATAAGGGACTCTATACAGTCATGCTGATTGTGGCAGCAGGAAGGAAGAGAACCTACAGATaGGCTGCAGAGACAGGTGGG +
Preference number: 2 (lower is better)
Translates to: CRWYKGLYTVMLIVAAGRKRTYR*AAETGG
Trigger: CCCACCTGTCTCTGCAGCTCATCTGTAGGTTCTCTT...CCTTCCTGCTGCCACAATCAGCATGACTGTATAGAGTCCCTTATACCATCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
3UTR-3UTR GCA 90 bp GGCTGTGTCCTTATGCAAGACTACAAACACTTTAAGCTTCACTATGTAACACTGAACCTACAGATGAGCTaGAGAGACAGGTGGGGCAGT +
Preference number: 2 (lower is better)
Translates to: GCVLMQDYKHFKLHYVTLNLQMS*RDRWGS
Trigger: ACTGCCCCACCTGTCTCTGCAGCTCATCTGTAGGTT...CAGTGTTACATAGTGAAGCTTAAAGTGTTTGTAGTCTTGCATAAGGACACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
3UTR-3UTR TCA 90 bp TTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATATTAGTGACTCCCAGTaGCTTAAGTCACCTGACAGA +
Preference number: 2 (lower is better)
Translates to: LRHVHLGILLPYNSGCVDISDSQ*LKSPDR
Trigger: TCTGTCAGGTGACTTAAGTCACTGGGAGTCACTAAT...ATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
3UTR CCA 72 bp CAGGGCCACATTATCTGCACAGAAACACGCTGCACATaGCCCACACTGAAGATGAGCTACGTAGGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: QGHIICTETRCT*PTLKMSYVGVG
Trigger: CCCCACCCCTACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
3UTR GCA 72 bp CGAGAACAGGGCCACATTATCTGCACAGAAACACGCTaGACATGGCCCACACTGAAGATGAGCTACGTAGGG +
Preference number: 3 (lower is better)
Translates to: REQGHIICTETR*TWPTLKMSYVG
Trigger: CCCTACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
3UTR GCA 72 bp AAGGTTCTGGGTTCCCGAGAACAGGGCCACATTATCTaGACAGAAACACGCTGCACATGGCCCACACTGAAG +
Preference number: 3 (lower is better)
Translates to: KVLGSREQGHII*TETRCTWPTLK
Trigger: CTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCAGAACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
3UTR-3UTR CAA 90 bp CGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATGGTTTTAGCAATGGCAACTaGCCCTGCCTTCCAAACAAA +
Preference number: 3 (lower is better)
Translates to: RHVHLGILLPYNSGCVDGFSNGN*PCLPNK
Trigger: TTTGTTTGGAAGGCAGGGCAAGTTGCCATTGCTAAA...ACCATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCCCACACCCCGCTGGAGCTGGTaGCTCACCCAGTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SREQGHIICTETRCTWPTPRWSW*LTQSLS
Trigger: GGACAGGGACTGGGTGAGGCACCAGCTCCAGCGGGG...TGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp ATTATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTACCGAAGGCGCGGGGCTaGTGCGGGGTGCACAGCGCG +
Preference number: 4 (lower is better)
Translates to: IICTETRCTWPTLKMSYVPKARG*CGVHSA
Trigger: CGCGCTGTGCACCCCGCATCAGCCCCGCGCCTTCGG...TACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCCCGTGGTGTCCAGCGTaGAGAGCACTGGGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: WVPENRATLSAQKHAAHGPWCPA*RALGAG
Trigger: ACCTGCGCCCAGTGCTCTGCACGCTGGACACCACGG...GCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp CAGGGAGGCTCTTCAGAGCGAGTAAGGGGTCAGTTATTTAGGCTGTGTCCTTATAGCCGCCGCCGCCGCTaGTGTAGGGGTCCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: QGGSSERVRGQLFRLCPYSRRRR*CRGPAG
Trigger: ACCGGCTGGACCCCTACAGCAGCGGCGGCGGCGGCT...ATAAGGACACAGCCTAAATAACTGACCCCTTACTCGCTCTGAAGAGCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCCCACATCCGGGGCTGGGTGGTaGCATGCTCCCTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: SREQGHIICTETRCTWPTSGAGW*HAPSST
Trigger: AGTGCTGGAGGGAGCATGCCACCACCCAGCCCCGGA...TGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp ATTATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTAGGGGTCCAGCCGGTCTaGCACGCTCTCGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: IICTETRCTWPTLKMSYVGVQPV*HALGAG
Trigger: CCCAGCGCCGAGAGCGTGTCAGACCGGCTGGACCCC...TACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp CAGGGAGGCTCTTCAGAGCGAGTAAGGGGTCAGTTATTTAGGCTGTGTCCTTATTGTCCAGGCTCCGGGTaGACAGCGACGCCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: QGGSSERVRGQLFRLCPYCPGSG*TATPRP
Trigger: CGGCCTCGGCGTCGCTGTGCACCCGGAGCCTGGACA...ATAAGGACACAGCCTAAATAACTGACCCCTTACTCGCTCTGAAGAGCCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTAGGCAGCCCCGCTGGAGCTaGTGCCTCACCCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: YLHRNTLHMAHTEDELRRQPRWS*CLTQSL
Trigger: CAGGGACTGGGTGAGGCACCAGCTCCAGCGGGGCTG...CCTACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCGTTCACCAAGTCCTCTaGCAGCTGGGAGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: WVPENRATLSAQKHAAHGVHQVL*QLGGWG
Trigger: CCCCCACCCTCCCAGCTGCCAGAGGACTTGGTGAAC...GCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp CAGGGAGGCTCTTCAGAGCGAGTAAGGGGTCAGTTATTTAGGCTGTGTCCTTATCCTTTGTGGCCCAGCTaGAGAAGCCGGGCCGCCACC +
Preference number: 4 (lower is better)
Translates to: QGGSSERVRGQLFRLCPYPLWPS*RSRAAT
Trigger: GGTGGCGGCCCGGCTTCTGCAGCTGGGCCACAAAGG...ATAAGGACACAGCCTAAATAACTGACCCCTTACTCGCTCTGAAGAGCCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCAGACAGGGTGGAGCATaGAGCGCTGCTCGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: WVPENRATLSAQKHAAHGRQGGA*SAARWG
Trigger: ACCCCAACGAGCAGCGCTGCATGCTCCACCCTGTCT...GCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp CAGGGAGGCTCTTCAGAGCGAGTAAGGGGTCAGTTATTTAGGCTGTGTCCTTATTCCGACGGCTGCAGCTaGAGCAGCTGCCGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: QGGSSERVRGQLFRLCPYSDGCS*SSCRCF
Trigger: GAAGCACCGGCAGCTGCTTCAGCTGCAGCCGTCGGA...ATAAGGACACAGCCTAAATAACTGACCCCTTACTCGCTCTGAAGAGCCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTAGGGTCAGAAGCACCGACTaGACATGGGGGCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: YLHRNTLHMAHTEDELRRVRSTD*TWGRGT
Trigger: GGTGCCTCGCCCCCATGTGCAGTCGGTGCTTCTGAC...CCTACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCGGGTCAGGCTTGATGTaGCAGAGGACAGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: WVPENRATLSAQKHAAHGGSGLM*QRTAAP
Trigger: TGGTGCTGCTGTCCTCTGCCACATCAAGCCTGACCC...GCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCCCACAGCCTCGTCAATaGATAGGCTGTCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: WVPENRATLSAQKHAAHGPQPRQ*IGCPTA
Trigger: GGCTGTGGGACAGCCTATCCATTGACGAGGCTGTGG...GCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp TATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTAGGCCACAGGGTCAGGCTTaGTGTGGCAGAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: YLHRNTLHMAHTEDELRRPQGQA*CGRGQQ
Trigger: CTGCTGTCCTCTGCCACATCAAGCCTGACCCTGTGG...CCTACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCGCAACCTTGGAGACTTaGCGCAGCCACCGTAAGTAC +
Preference number: 4 (lower is better)
Translates to: WVPENRATLSAQKHAAHGATLET*RSHRKY
Trigger: GTACTTACGGTGGCTGCGGCAAGTCTCCAAGGTTGC...GCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCCCACACCTTTCAGGAAGCCTTaGCAACCGGTTGTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SREQGHIICTETRCTWPTPFRKP*QPVVSC
Trigger: GCAGGACACAACCGGTTGGCAAGGCTTCCTGAAAGG...TGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TCACCTGACAGAGTAAAGCAACTCCTAGGAGTTAGTCGCCATATTCTACAAATGGCCGCCGCCAGGGCTTaGTCCTCACCCGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SPDRVKQLLGVSRHILQMAAARA*SSPVGS
Trigger: GGACCCCACGGGTGAGGACCAAGCCCTGGCGGCGGC...CATTTGTAGAATATGGCGACTAACTCCTAGGAGTTGCTTTACTCTGTCAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTAGGTGGGGTAGGCAGGGCTaGTCTCATTCAGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: YLHRNTLHMAHTEDELRRWGRQG*SHSGLQ
Trigger: CTGGAGTCCTGAATGAGAGCAGCCCTGCCTACCCCA...CCTACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TGTAGATGGTATAAGGGACTCTATACAGTCATGCTGATTGTGGCAGCAGGAAGGCGGGGCGGTGGGGCATaGCCGGATCAGCCTCTAACT +
Preference number: 4 (lower is better)
Translates to: CRWYKGLYTVMLIVAAGRRGGGA*PDQPLT
Trigger: AGTTAGAGGCTGATCCGGCCATGCCCCACCGCCCCG...CCTTCCTGCTGCCACAATCAGCATGACTGTATAGAGTCCCTTATACCATCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCTCTCCTGCTGACGGCTaGTCAATCTTGAAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: WVPENRATLSAQKHAAHGSPADG*SILKQR
Trigger: TCGCTGCTTCAAGATTGACCAGCCGTCAGCAGGAGA...GCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp ATTATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTAAGCACCGACTGCACATaGGGGCGAGGCACCACACTG +
Preference number: 4 (lower is better)
Translates to: IICTETRCTWPTLKMSYVSTDCT*GRGTTL
Trigger: CAGTGTGGTGCCTCGCCCCCATGTGCAGTCGGTGCT...TACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCCTGATCATCTGGATCTaGCTGAGCAGGGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: WVPENRATLSAQKHAAHGLIIWI*LSRGCK
Trigger: TTTGCAGCCCCTGCTCAGCCAGATCCAGATGATCAG...GCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp CAGGGAGGCTCTTCAGAGCGAGTAAGGGGTCAGTTATTTAGGCTGTGTCCTTATGAGGCCCCGAAGAGCTaGACGCTAAACAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QGGSSERVRGQLFRLCPYEAPKS*TLNSAG
Trigger: ACCAGCACTGTTTAGCGTTCAGCTCTTCGGGGCCTC...ATAAGGACACAGCCTAAATAACTGACCCCTTACTCGCTCTGAAGAGCCTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TCACCTGACAGAGTAAAGCAACTCCTAGGAGTTAGTCGCCATATTCTACAAATGACCCCGCCGCCTTTGTaGCCCAGCTGCAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: SPDRVKQLLGVSRHILQMTPPPL*PSCRSR
Trigger: CCGGCTTCTGCAGCTGGGCCACAAAGGCGGCGGGGT...CATTTGTAGAATATGGCGACTAACTCCTAGGAGTTGCTTTACTCTGTCAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp ATTATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTAGGCGAGGCACCACACTaGGATGGAGGAAGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: IICTETRCTWPTLKMSYVGEAPH*DGGRCS
Trigger: GCTACACCTTCCTCCATCCCAGTGTGGTGCCTCGCC...TACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TGTAGATGGTATAAGGGACTCTATACAGTCATGCTGATTGTGGCAGCAGGAAGGTGCAGCGCTGCTCGTTaGGGTAGGCAGGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CRWYKGLYTVMLIVAAGRCSAAR*GRQGCS
Trigger: AGAGCAGCCCTGCCTACCCCAACGAGCAGCGCTGCA...CCTTCCTGCTGCCACAATCAGCATGACTGTATAGAGTCCCTTATACCATCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCCCACAGATAAACTGATCATCTaGATCTGGCTGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SREQGHIICTETRCTWPTDKLII*IWLSRG
Trigger: GCCCCTGCTCAGCCAGATCCAGATGATCAGTTTATC...TGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp TATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTAGGTTGGTGGGAGCTCAGTaGTCTGGTTGTGCTGGACAT +
Preference number: 4 (lower is better)
Translates to: YLHRNTLHMAHTEDELRRLVGAQ*SGCAGH
Trigger: ATGTCCAGCACAACCAGATCACTGAGCTCCCACCAA...CCTACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp TGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCCTTCTTCACAGCTCATaGTGTATGACCTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: WVPENRATLSAQKHAAHGLLHSS*CMTWTE
Trigger: CTCTGTCCAGGTCATACATCATGAGCTGTGAAGAAG...GCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TCACCTGACAGAGTAAAGCAACTCCTAGGAGTTAGTCGCCATATTCTACAAATGGGTGGTGGTGGCAGCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SPDRVKQLLGVSRHILQMGGGGS*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCTGCCACCACCACC...CATTTGTAGAATATGGCGACTAACTCCTAGGAGTTGCTTTACTCTGTCAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCTTATGGCTCCTTTCCTaGGGAGCTACAGAGCCATTA +
Preference number: 4 (lower is better)
Translates to: WVPENRATLSAQKHAAHGLWLLS*GATEPL
Trigger: TAATGGCTCTGTAGCTCCCCAGGAAAGGAGCCATAA...GCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp TATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTAGGGCAGGTCAAGCTGAGTaGCATGTTGCACAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: YLHRNTLHMAHTEDELRRAGQAE*HVAQSP
Trigger: TGGACTTTGTGCAACATGTCACTCAGCTTGACCTGC...CCTACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp GGAGACTCTCAGTCTCTCTGGTTAGTTTATTGTTTAAAACAGTACTCAGGCTGGCCCGGCTGCCGTTGCTaGACACCCCCTCAATGGGTT +
Preference number: 4 (lower is better)
Translates to: GDSQSLWLVYCLKQYSGWPGCRC*TPPQWV
Trigger: AACCCATTGAGGGGGTGTTCAGCAACGGCAGCCGGG...CCAGCCTGAGTACTGTTTTAAACAATAAACTAACCAGAGAGACTGAGAGTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp CAGGGAGGCTCTTCAGAGCGAGTAAGGGGTCAGTTATTTAGGCTGTGTCCTTATGTCAGGTCTAGCTCCTaGAGCTTAGGTGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: QGGSSERVRGQLFRLCPYVRSSS*SLGGRF
Trigger: AAACCTGCCACCTAAGCTGCAGGAGCTAGACCTGAC...ATAAGGACACAGCCTAAATAACTGACCCCTTACTCGCTCTGAAGAGCCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCAACGCTAAACAGTGCTaGTGCTTTTTCACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: WVPENRATLSAQKHAAHGNAKQC*CFFTSS
Trigger: GGAGGAAGTGAAAAAGCACCAGCACTGTTTAGCGTT...GCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp GGAGACTCTCAGTCTCTCTGGTTAGTTTATTGTTTAAAACAGTACTCAGGCTGGGACAGGCAGACAGGGTaGAGCATGCAGCGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GDSQSLWLVYCLKQYSGWDRQTG*SMQRCS
Trigger: CGAGCAGCGCTGCATGCTCCACCCTGTCTGCCTGTC...CCAGCCTGAGTACTGTTTTAAACAATAAACTAACCAGAGAGACTGAGAGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp ATTATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTATGCAAAATAGCCTCCTaGCTTCCGGAGAGGCGCATC +
Preference number: 4 (lower is better)
Translates to: IICTETRCTWPTLKMSYVCKIAS*LPERRI
Trigger: GATGCGCCTCTCCGGAAGCCAGGAGGCTATTTTGCA...TACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp ATTATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTACCACTTTTCCACCAATaGGGGGCAGGACATGCATCT +
Preference number: 4 (lower is better)
Translates to: IICTETRCTWPTLKMSYVPLFHQ*GAGHAS
Trigger: AGATGCATGTCCTGCCCCTCATTGGTGGAAAAGTGG...TACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCCCACATTGACTTCTGGGAGCTaGATAACTTCAGGAAAGACT +
Preference number: 4 (lower is better)
Translates to: SREQGHIICTETRCTWPTLTSGS*ITSGKT
Trigger: AGTCTTTCCTGAAGTTATGCAGCTCCCAGAAGTCAA...TGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCATTTACAGACAGGGCTaGGACACACAGCTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: WVPENRATLSAQKHAAHGIYRQG*DTQLVF
Trigger: AAAAACAAGCTGTGTGTCGCAGCCCTGTCTGTAAAT...GCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp AAATTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTACAGCGTGCAGAGCACTaGGCGCAGGTAGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: KLRHVHLGILLPYNSGCVQRAEH*AQVGRG
Trigger: GCCTCGTCCTACCTGCGCCCAGTGCTCTGCACGCTG...TACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCGAGATAATTCGGAACTaGGTAGACATCAAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: WVPENRATLSAQKHAAHGEIIRN*VDIKLS
Trigger: GCTCAACTTGATGTCTACCCAGTTCCGAATTATCTC...GCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTAGGCCAAAATGTCACTCATaGTGCACTGGAGAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: YLHRNTLHMAHTEDELRRPKCHS*CTGEGR
Trigger: CCTACCTTCTCCAGTGCACCATGAGTGACATTTTGG...CCTACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp AAATTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATTCCGGGGCTGGGTaGTGGCATGCTCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KLRHVHLGILLPYNSGCVDSGAG*WHAPSS
Trigger: GCTGGAGGGAGCATGCCACCACCCAGCCCCGGAATC...TACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp GGCTGTGTCCTTATGCAAGACTACAAACACTTTAAGCTTCACTATGTAACACTGGGAAGATTCCGGGGCTaGGTGGTGGCATGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GCVLMQDYKHFKLHYVTLGRFRG*VVACSL
Trigger: GAGGGAGCATGCCACCACCCAGCCCCGGAATCTTCC...CAGTGTTACATAGTGAAGCTTAAAGTGTTTGTAGTCTTGCATAAGGACACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp TCACCTGACAGAGTAAAGCAACTCCTAGGAGTTAGTCGCCATATTCTACAAATGGGCTGTCAGCCTTCATaGGGAGGTTTGGTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SPDRVKQLLGVSRHILQMGCQPS*GGLVGA
Trigger: AGCTCCCACCAAACCTCCTCATGAAGGCTGACAGCC...CATTTGTAGAATATGGCGACTAACTCCTAGGAGTTGCTTTACTCTGTCAGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp TCTGTAAAAGGTTCTGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACACAGCTCATGATGTATaGCCTGGACAGAGACAGTGG +
Preference number: 4 (lower is better)
Translates to: SVKGSGFPRTGPHYLHRNTAHDV*PGQRQW
Trigger: CCACTGTCTCTGTCCAGGTCATACATCATGAGCTGT...GTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCAGAACCTTTTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp TCTGTAAAAGGTTCTGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACCTTTGCTGCCCAGGATaGAAAACTCATCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SVKGSGFPRTGPHYLHRNLCCPG*KTHPVE
Trigger: CTCCACAGGATGAGTTTTTCATCCTGGGCAGCAAAG...GTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCAGAACCTTTTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp CAGGGAGGCTCTTCAGAGCGAGTAAGGGGTCAGTTATTTAGGCTGTGTCCTTATCTTCTCGCAGGGCATTaGAAGATACATTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QGGSSERVRGQLFRLCPYLLAGH*KIHSAL
Trigger: CAGAGCTGAATGTATCTTGCAATGCCCTGCGAGAAG...ATAAGGACACAGCCTAAATAACTGACCCCTTACTCGCTCTGAAGAGCCTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp GGAGACTCTCAGTCTCTCTGGTTAGTTTATTGTTTAAAACAGTACTCAGGCTGGTGGCAGCTGGGAGGGTaGGGGTTTGCCTTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GDSQSLWLVYCLKQYSGWWQLGG*GFALGS
Trigger: ACTTCCTAAGGCAAACCCCCACCCTCCCAGCTGCCA...CCAGCCTGAGTACTGTTTTAAACAATAAACTAACCAGAGAGACTGAGAGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp GGCTGTGTCCTTATGCAAGACTACAAACACTTTAAGCTTCACTATGTAACACTGAAGTCCTCTGGCAGCTaGGAGGGTGGGGGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: GCVLMQDYKHFKLHYVTLKSSGS*EGGGLP
Trigger: AGGCAAACCCCCACCCTCCCAGCTGCCAGAGGACTT...CAGTGTTACATAGTGAAGCTTAAAGTGTTTGTAGTCTTGCATAAGGACACAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp CGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATGGTCAATGCCCTCATCACTaGCCTCAGCTGGCACCTGAA +
Preference number: 4 (lower is better)
Translates to: RHVHLGILLPYNSGCVDGQCPHH*PQLAPE
Trigger: TTCAGGTGCCAGCTGAGGCCAGTGATGAGGGCATTG...ACCATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp CGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATGGTAAAGACCCAGATAGCTaGGCTGGTGCATGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RHVHLGILLPYNSGCVDGKDPDS*AGACSP
Trigger: TGGAGAGCATGCACCAGCTCAGCTATCTGGGTCTTT...ACCATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp TCACCTGACAGAGTAAAGCAACTCCTAGGAGTTAGTCGCCATATTCTACAAATGGTAGCGCTGGACAGCTaGCGTTGGAAGGAGTTAGAC +
Preference number: 4 (lower is better)
Translates to: SPDRVKQLLGVSRHILQMVALDS*RWKELD
Trigger: GTCTAACTCCTTCCAACGTCAGCTGTCCAGCGCTAC...CATTTGTAGAATATGGCGACTAACTCCTAGGAGTTGCTTTACTCTGTCAGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp AAATTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAAGGAACGTCCGGAGCTaGGGCTGCCATCGCCTTATC +
Preference number: 4 (lower is better)
Translates to: KLRHVHLGILLPYNSGCVRNVRS*GCHRLI
Trigger: GATAAGGCGATGGCAGCCGCAGCTCCGGACGTTCCT...TACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp CAGGGAGGCTCTTCAGAGCGAGTAAGGGGTCAGTTATTTAGGCTGTGTCCTTATCTGAACGCTAAACAGTaGTGGTGCTTTTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: QGGSSERVRGQLFRLCPYLNAKQ*WCFFTS
Trigger: GGAAGTGAAAAAGCACCAGCACTGTTTAGCGTTCAG...ATAAGGACACAGCCTAAATAACTGACCCCTTACTCGCTCTGAAGAGCCTCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp CGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATGGTCTGCTAGGGTTGGAATaGTGCAGACTGCTGACGGAA +
Preference number: 4 (lower is better)
Translates to: RHVHLGILLPYNSGCVDGLLGLE*CRLLTE
Trigger: TTCCGTCAGCAGTCTGCAGCATTCCAACCCTAGCAG...ACCATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TGTAGATGGTATAAGGGACTCTATACAGTCATGCTGATTGTGGCAGCAGGAAGGTCAGTGATCTGGTTGTaGTGGACATCCAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: CRWYKGLYTVMLIVAAGRSVIWL*WTSKTS
Trigger: GGAGGTCTTGGATGTCCAGCACAACCAGATCACTGA...CCTTCCTGCTGCCACAATCAGCATGACTGTATAGAGTCCCTTATACCATCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTAGGAAGTTCCTCCAGTTTTaGCATTTTACTTGCCGGGAA +
Preference number: 4 (lower is better)
Translates to: YLHRNTLHMAHTEDELRRKFLQF*HFTCRE
Trigger: TTCCCGGCAAGTAAAATGGCAAAACTGGAGGAACTT...CCTACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp GGCTGTGTCCTTATGCAAGACTACAAACACTTTAAGCTTCACTATGTAACACTGAGGTGTAGCCCAGGATaGGCGTGGACTCTGTCACTC +
Preference number: 4 (lower is better)
Translates to: GCVLMQDYKHFKLHYVTLRCSPG*AWTLSL
Trigger: GAGTGACAGAGTCCACGCGCATCCTGGGCTACACCT...CAGTGTTACATAGTGAAGCTTAAAGTGTTTGTAGTCTTGCATAAGGACACAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp CGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATGGTTCTCCTCAGAAAGTGTaGCTGGAGGCAGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: RHVHLGILLPYNSGCVDGSPQKV*LEAGFP
Trigger: TGGAAACCCTGCCTCCAGCCACACTTTCTGAGGAGA...ACCATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TCTGTAAAAGGTTCTGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACCGACAGAGAACCGTTTaGCACTTGCCAACATTAGCA +
Preference number: 4 (lower is better)
Translates to: SVKGSGFPRTGPHYLHRNRQRTV*HLPTLA
Trigger: TGCTAATGTTGGCAAGTGCCAAACGGTTCTCTGTCG...GTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCAGAACCTTTTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp TCACCTGACAGAGTAAAGCAACTCCTAGGAGTTAGTCGCCATATTCTACAAATGTTAAGGCCTGTAGTCTaGGGGTCTCCACACAGTTCC +
Preference number: 4 (lower is better)
Translates to: SPDRVKQLLGVSRHILQMLRPVV*GSPHSS
Trigger: GGAACTGTGTGGAGACCCTCAGACTACAGGCCTTAA...CATTTGTAGAATATGGCGACTAACTCCTAGGAGTTGCTTTACTCTGTCAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp TGTAGATGGTATAAGGGACTCTATACAGTCATGCTGATTGTGGCAGCAGGAAGGTTCAATGTCACCAGCTaGTTCCTCTCACAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: CRWYKGLYTVMLIVAAGRFNVTS*FLSQCR
Trigger: TCTGCACTGTGAGAGGAATCAGCTGGTGACATTGAA...CCTTCCTGCTGCCACAATCAGCATGACTGTATAGAGTCCCTTATACCATCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp CAGGGAGGCTCTTCAGAGCGAGTAAGGGGTCAGTTATTTAGGCTGTGTCCTTATGCTATGAGGCTTTCCTaGATAGAATCGAATGAGACA +
Preference number: 4 (lower is better)
Translates to: QGGSSERVRGQLFRLCPYAMRLS*IESNET
Trigger: TGTCTCATTCGATTCTATGCAGGAAAGCCTCATAGC...ATAAGGACACAGCCTAAATAACTGACCCCTTACTCGCTCTGAAGAGCCTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TGTAGATGGTATAAGGGACTCTATACAGTCATGCTGATTGTGGCAGCAGGAAGGCGGTTCACTGGCAACTaGATTTTGCCTTTTCGGACA +
Preference number: 4 (lower is better)
Translates to: CRWYKGLYTVMLIVAAGRRFTGN*ILPFRT
Trigger: TGTCCGAAAAGGCAAAATGCAGTTGCCAGTGAACCG...CCTTCCTGCTGCCACAATCAGCATGACTGTATAGAGTCCCTTATACCATCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp CGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATGGTGGGAGGGTGGGGGTTTaGCTTAGGAAGTTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: RHVHLGILLPYNSGCVDGGRVGV*LRKFCF
Trigger: AAAACAGAACTTCCTAAGGCAAACCCCCACCCTCCC...ACCATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TCACCTGACAGAGTAAAGCAACTCCTAGGAGTTAGTCGCCATATTCTACAAATGCTAGGGTTGGAATGCTaGAGACTGCTGACGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SPDRVKQLLGVSRHILQMLGLEC*RLLTER
Trigger: CCTTTCCGTCAGCAGTCTGCAGCATTCCAACCCTAG...CATTTGTAGAATATGGCGACTAACTCCTAGGAGTTGCTTTACTCTGTCAGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TCTGTAAAAGGTTCTGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACGGAAAGGCTCCTAGGTaGTTATTGGAAAGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: SVKGSGFPRTGPHYLHRNGKAPR*LLERLR
Trigger: CCTTAACCTTTCCAATAACCACCTAGGAGCCTTTCC...GTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCAGAACCTTTTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp AAATTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAAGCTCCAGGCTTTTGTaGTCCAGGGCAAGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: KLRHVHLGILLPYNSGCVSSRLL*SRARRG
Trigger: TCCACGCCTTGCCCTGGACCACAAAAGCCTGGAGCT...TACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp GGAGACTCTCAGTCTCTCTGGTTAGTTTATTGTTTAAAACAGTACTCAGGCTGGTGCGTCTGCAGTTCATaGTTGTTGTGGGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: GDSQSLWLVYCLKQYSGWCVCSS*LLWGWL
Trigger: AAGCCATCCCCACAACAATCATGAACTGCAGACGCA...CCAGCCTGAGTACTGTTTTAAACAATAAACTAACCAGAGAGACTGAGAGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp AAATTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGTACCACCACAGCACTaGTGCTGTCATGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: KLRHVHLGILLPYNSGCVVPPQH*CCHGSH
Trigger: ATGGCTGCCATGACAGCATCAGTGCTGTGGTGGTAC...TACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp TGTAGATGGTATAAGGGACTCTATACAGTCATGCTGATTGTGGCAGCAGGAAGGTGCTGCTGCTCCTGGTaGTGTTTCATGATTTCTTTG +
Preference number: 4 (lower is better)
Translates to: CRWYKGLYTVMLIVAAGRCCCSW*CFMISL
Trigger: CAAAGAAATCATGAAACATCACCAGGAGCAGCAGCA...CCTTCCTGCTGCCACAATCAGCATGACTGTATAGAGTCCCTTATACCATCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TCTGTAAAAGGTTCTGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACAATTTGGTGAACCTTTaGAGTTCACCAAGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SVKGSGFPRTGPHYLHRNNLVNL*SSPSPL
Trigger: CAGAGGACTTGGTGAACTGCAAAGGTTCACCAAATT...GTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCAGAACCTTTTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATATCTTCAGACGGGGGTaGCCTGTTAACAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: LRHVHLGILLPYNSGCVDIFRRG*PVNKGT
Trigger: TGTGCCCTTGTTAACAGGGCACCCCCGTCTGAAGAT...ATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATCCGGAGAGGCGCATCTaGAGCAACCTCTATCACATT +
Preference number: 4 (lower is better)
Translates to: LRHVHLGILLPYNSGCVDPERRI*SNLYHI
Trigger: AATGTGATAGAGGTTGCTGCAGATGCGCCTCTCCGG...ATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp GGAGACTCTCAGTCTCTCTGGTTAGTTTATTGTTTAAAACAGTACTCAGGCTGGATTTTGGATCTGCAATaGCTTCTCGTCCGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GDSQSLWLVYCLKQYSGWILDLQ*LLVRLQ
Trigger: CTGGAGGCGGACGAGAAGCCATTGCAGATCCAAAAT...CCAGCCTGAGTACTGTTTTAAACAATAAACTAACCAGAGAGACTGAGAGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp CGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATGGTTCAGCAGGAAGGGACTaGAGAAAATTTCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: RHVHLGILLPYNSGCVDGSAGRD*RKFPSS
Trigger: GCTGGATGGAAATTTTCTCCAGTCCCTTCCTGCTGA...ACCATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp GGAGACTCTCAGTCTCTCTGGTTAGTTTATTGTTTAAAACAGTACTCAGGCTGGGTGATCTGGTTGTGCTaGACATCCAAGACCTCCACA +
Preference number: 4 (lower is better)
Translates to: GDSQSLWLVYCLKQYSGWVIWLC*TSKTST
Trigger: TGTGGAGGTCTTGGATGTCCAGCACAACCAGATCAC...CCAGCCTGAGTACTGTTTTAAACAATAAACTAACCAGAGAGACTGAGAGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TCACCTGACAGAGTAAAGCAACTCCTAGGAGTTAGTCGCCATATTCTACAAATGCTTCATGAGGAGGTTTaGTGGGAGCTCAGTGATCTG +
Preference number: 4 (lower is better)
Translates to: SPDRVKQLLGVSRHILQMLHEEV*WELSDL
Trigger: CAGATCACTGAGCTCCCACCAAACCTCCTCATGAAG...CATTTGTAGAATATGGCGACTAACTCCTAGGAGTTGCTTTACTCTGTCAGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp GGAGACTCTCAGTCTCTCTGGTTAGTTTATTGTTTAAAACAGTACTCAGGCTGGCTCAGAAAGTGTGGCTaGAGGCAGGGTTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: GDSQSLWLVYCLKQYSGWLRKCG*RQGFQF
Trigger: AAACTGGAAACCCTGCCTCCAGCCACACTTTCTGAG...CCAGCCTGAGTACTGTTTTAAACAATAAACTAACCAGAGAGACTGAGAGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TCTGTAAAAGGTTCTGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACAGACTTCGATACAATTaGAGTGAGCAATCACGGTGT +
Preference number: 4 (lower is better)
Translates to: SVKGSGFPRTGPHYLHRNRLRYN*SEQSRC
Trigger: ACACCGTGATTGCTCACTCCAATTGTATCGAAGTCT...GTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCAGAACCTTTTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp CGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATGGTGAAAAACTCATCCTGTaGAGTCAGAAGCACCGACTG +
Preference number: 4 (lower is better)
Translates to: RHVHLGILLPYNSGCVDGEKLIL*SQKHRL
Trigger: CAGTCGGTGCTTCTGACTCCACAGGATGAGTTTTTC...ACCATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp AAATTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGCTCATCAGAGGCTGTaGAGCCCACCTCACTACTCA +
Preference number: 4 (lower is better)
Translates to: KLRHVHLGILLPYNSGCVAHQRL*SPPHYS
Trigger: TGAGTAGTGAGGTGGGCTCCACAGCCTCTGATGAGC...TACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp GGCTGTGTCCTTATGCAAGACTACAAACACTTTAAGCTTCACTATGTAACACTGTTGGCCCTGCTGCAGTaGATGTCTACTTCCACCTCA +
Preference number: 4 (lower is better)
Translates to: GCVLMQDYKHFKLHYVTLLALLQ*MSTSTS
Trigger: TGAGGTGGAAGTAGACATCCACTGCAGCAGGGCCAA...CAGTGTTACATAGTGAAGCTTAAAGTGTTTGTAGTCTTGCATAAGGACACAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp TGTAGATGGTATAAGGGACTCTATACAGTCATGCTGATTGTGGCAGCAGGAAGGACCGTAAGTACTCCGTaGAAGTATCAAAGCAGATGT +
Preference number: 4 (lower is better)
Translates to: CRWYKGLYTVMLIVAAGRTVSTP*KYQSRC
Trigger: ACATCTGCTTTGATACTTTCACGGAGTACTTACGGT...CCTTCCTGCTGCCACAATCAGCATGACTGTATAGAGTCCCTTATACCATCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TGTAGATGGTATAAGGGACTCTATACAGTCATGCTGATTGTGGCAGCAGGAAGGCTGGCAACTGCATTTTaGCTTTTCGGACATTGTACA +
Preference number: 4 (lower is better)
Translates to: CRWYKGLYTVMLIVAAGRLATAF*LFGHCT
Trigger: TGTACAATGTCCGAAAAGGCAAAATGCAGTTGCCAG...CCTTCCTGCTGCCACAATCAGCATGACTGTATAGAGTCCCTTATACCATCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp GGAGACTCTCAGTCTCTCTGGTTAGTTTATTGTTTAAAACAGTACTCAGGCTGGGTGATGATGGCTTTGTaGTGCTTAATCCTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: GDSQSLWLVYCLKQYSGWVMMAL*CLILFR
Trigger: GCGGAAGAGGATTAAGCAGCACAAAGCCATCATCAC...CCAGCCTGAGTACTGTTTTAAACAATAAACTAACCAGAGAGACTGAGAGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp AAATTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAACTGCTGATCTCAGATaGCATGCCACTGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KLRHVHLGILLPYNSGCVTADLR*HATAGG
Trigger: TCCTCCAGCAGTGGCATGGCATCTGAGATCAGCAGT...TACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp GGCTGTGTCCTTATGCAAGACTACAAACACTTTAAGCTTCACTATGTAACACTGTTTCCTTGGCCCTGCTaGAGTGGATGTCTACTTCCA +
Preference number: 4 (lower is better)
Translates to: GCVLMQDYKHFKLHYVTLFPWPC*SGCLLP
Trigger: TGGAAGTAGACATCCACTGCAGCAGGGCCAAGGAAA...CAGTGTTACATAGTGAAGCTTAAAGTGTTTGTAGTCTTGCATAAGGACACAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp GGCTGTGTCCTTATGCAAGACTACAAACACTTTAAGCTTCACTATGTAACACTGCCTTTTCCTTGGCCCTaGTGCAGTGGATGTCTACTT +
Preference number: 4 (lower is better)
Translates to: GCVLMQDYKHFKLHYVTLPFPWP*CSGCLL
Trigger: AAGTAGACATCCACTGCAGCAGGGCCAAGGAAAAGG...CAGTGTTACATAGTGAAGCTTAAAGTGTTTGTAGTCTTGCATAAGGACACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATCATGAGGAGGTTTGGTaGGAGCTCAGTGATCTGGTT +
Preference number: 4 (lower is better)
Translates to: LRHVHLGILLPYNSGCVDHEEVW*ELSDLV
Trigger: AACCAGATCACTGAGCTCCCACCAAACCTCCTCATG...ATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp TCACCTGACAGAGTAAAGCAACTCCTAGGAGTTAGTCGCCATATTCTACAAATGACCTCTATCACATTATaGCTCCTTTCCTGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SPDRVKQLLGVSRHILQMTSITL*LLSWGA
Trigger: AGCTCCCCAGGAAAGGAGCCATAATGTGATAGAGGT...CATTTGTAGAATATGGCGACTAACTCCTAGGAGTTGCTTTACTCTGTCAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp TTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATAAATGTCACTCATGGTaGACTGGAGAAGGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: LRHVHLGILLPYNSGCVDKCHSW*TGEGRA
Trigger: TGCCCTACCTTCTCCAGTGCACCATGAGTGACATTT...ATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp GGCTGTGTCCTTATGCAAGACTACAAACACTTTAAGCTTCACTATGTAACACTGTTCCTCTTCCAGCTCTaGGGGGATGATAAACTGATC +
Preference number: 4 (lower is better)
Translates to: GCVLMQDYKHFKLHYVTLFLFQL*GDDKLI
Trigger: GATCAGTTTATCATCCCCCCAGAGCTGGAAGAGGAA...CAGTGTTACATAGTGAAGCTTAAAGTGTTTGTAGTCTTGCATAAGGACACAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR TCA 90 bp AAATTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTATCGATACAATTGGAGTaGGCAATCACGGTGTGCATG +
Preference number: 4 (lower is better)
Translates to: KLRHVHLGILLPYNSGCVSIQLE*AITVCM
Trigger: CATGCACACCGTGATTGCTCACTCCAATTGTATCGA...TACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR GCA 90 bp GGAGACTCTCAGTCTCTCTGGTTAGTTTATTGTTTAAAACAGTACTCAGGCTGGCAGTTTGTTTGCAGATaGATTCAGGAATCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GDSQSLWLVYCLKQYSGWQFVCR*IQESQA
Trigger: AGCCTGAGATTCCTGAATGCATCTGCAAACAAACTG...CCAGCCTGAGTACTGTTTTAAACAATAAACTAACCAGAGAGACTGAGAGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp GGCTGTGTCCTTATGCAAGACTACAAACACTTTAAGCTTCACTATGTAACACTGTACACACTTGACTTCTaGGAGCTGCATAACTTCAGG +
Preference number: 4 (lower is better)
Translates to: GCVLMQDYKHFKLHYVTLYTLDF*ELHNFR
Trigger: CCTGAAGTTATGCAGCTCCCAGAAGTCAAGTGTGTA...CAGTGTTACATAGTGAAGCTTAAAGTGTTTGTAGTCTTGCATAAGGACACAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp GGCTGTGTCCTTATGCAAGACTACAAACACTTTAAGCTTCACTATGTAACACTGAAAAGTCTGCCTTCTTaGACAGACCTGACTCATCCT +
Preference number: 4 (lower is better)
Translates to: GCVLMQDYKHFKLHYVTLKSLPS*TDLTHP
Trigger: AGGATGAGTCAGGTCTGTCCAAGAAGGCAGACTTTT...CAGTGTTACATAGTGAAGCTTAAAGTGTTTGTAGTCTTGCATAAGGACACAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp AAATTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTATGTCCATCGGTTCACTaGCAACTGCATTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: KLRHVHLGILLPYNSGCVCPSVH*QLHFAF
Trigger: AAAGGCAAAATGCAGTTGCCAGTGAACCGATGGACA...TACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CCA 90 bp CGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATGGTCTTCTCCAATACCTCTaGAATGTCAGTGAATTCATT +
Preference number: 4 (lower is better)
Translates to: RHVHLGILLPYNSGCVDGLLQYL*NVSEFI
Trigger: AATGAATTCACTGACATTCCAGAGGTATTGGAGAAG...ACCATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 90 bp CCGACAGATTCCTCTTCAGCCGCCCTCTCTTCAGCAGCAGCGAGTTaGCGCCGCCGCCGGCCGCGGGCACCGGAGCGGCCCCACCGGCCG +
Preference number: 5 (lower is better)
Translates to: PTDSSSAALSSAAAS*RRRRPRAPERPHRP
Trigger: CGGCCGGTGGGGCCGCTCCGGTGCCCGCGGCCGGCGGCGGCGCCAACTCGCTGCTGCTGAAGAGAGGGCGGCTGAAGAGGAATCTGTCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 90 bp GCTGCCGGTGCTTCAGGAGCAGCGTCTTCCTGTCCAGGCTCCGGGTaGACAGCGACGCCGAGGCCGAGCAGGACGCCGGGAGGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: AAGASGAASSCPGSG*TATPRPSRTPGGRQ
Trigger: CTGGCGGCCTCCCGGCGTCCTGCTCGGCCTCGGCGTCGCTGTGCACCCGGAGCCTGGACAGGAAGACGCTGCTCCTGAAGCACCGGCAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 90 bp CGACGAGGAGCCGCCGCCGCCGCTGCTGTAGGGGTCCAGCCGGTCTaGCACGCTCTCGGCGCTGGGGCTCAGGCTGAAGCTCTCGGTGTC +
Preference number: 5 (lower is better)
Translates to: RRGAAAAAAVGVQPV*HALGAGAQAEALGV
Trigger: GACACCGAGAGCTTCAGCCTGAGCCCCAGCGCCGAGAGCGTGTCAGACCGGCTGGACCCCTACAGCAGCGGCGGCGGCGGCTCCTCGTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 90 bp GCTGCAGAAGCCGGGCCGCCACCTCGGCGGCCGTGGTGTCCAGCGTaGAGAGCACTGGGCGCAGGTAGGACGAGGCCATGTGGCGGTCAA +
Preference number: 5 (lower is better)
Translates to: AAEAGPPPRRPWCPA*RALGAGRTRPCGGQ
Trigger: TTGACCGCCACATGGCCTCGTCCTACCTGCGCCCAGTGCTCTGCACGCTGGACACCACGGCCGCCGAGGTGGCGGCCCGGCTTCTGCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 90 bp CCGGGCCGCCACCTCGGCGGCCGTGGTGTCCAGCGTGCAGAGCACTaGGCGCAGGTAGGACGAGGCCATGTGGCGGTCAAAGACGTGCAC +
Preference number: 5 (lower is better)
Translates to: PGRHLGGRGVQRAEH*AQVGRGHVAVKDVH
Trigger: GTGCACGTCTTTGACCGCCACATGGCCTCGTCCTACCTGCGCCCAGTGCTCTGCACGCTGGACACCACGGCCGCCGAGGTGGCGGCCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 90 bp CTTTGTGGCCCAGCTGCAGAAGCCGGGCCGCCACCTCGGCGGCCGTaGTGTCCAGCGTGCAGAGCACTGGGCGCAGGTAGGACGAGGCCA +
Preference number: 5 (lower is better)
Translates to: LCGPAAEAGPPPRRP*CPACRALGAGRTRP
Trigger: TGGCCTCGTCCTACCTGCGCCCAGTGCTCTGCACGCTGGACACCACGGCCGCCGAGGTGGCGGCCCGGCTTCTGCAGCTGGGCCACAAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 90 bp CCCGCTATCACGCCAGTGCTGTCTACGCCCGTCGGGGCTTTCGGCTaGAGTAAAGCCGAGGTCTTCGGGGAAGGCGGCCGAGGCTGCGCG +
Preference number: 5 (lower is better)
Translates to: PAITPVLSTPVGAFG*SKAEVFGEGGRGCA
Trigger: CGCGCAGCCTCGGCCGCCTTCCCCGAAGACCTCGGCTTTACTGCAGCCGAAAGCCCCGACGGGCGTAGACAGCACTGGCGTGATAGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 90 bp CGCTGGAGCTGGTGCCTCACCCAGTCCCTGTCCGACGGCTGCAGCTaGAGCAGCTGCCGGTGCTTCAGGAGCAGCGTCTTCCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RWSWCLTQSLSDGCS*SSCRCFRSSVFLSR
Trigger: CCTGGACAGGAAGACGCTGCTCCTGAAGCACCGGCAGCTGCTTCAGCTGCAGCCGTCGGACAGGGACTGGGTGAGGCACCAGCTCCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 90 bp AGACAGGGTGGAGCATGCAGCGCTGCTCGTTGGGGTAGGCAGGGCTaGTCTCATTCAGGACTCCAGACGGGGGCTCATCAGAGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: RQGGACSAARWGRQG*SHSGLQTGAHQRLW
Trigger: CCACAGCCTCTGATGAGCCCCCGTCTGGAGTCCTGAATGAGAGCAGCCCTGCCTACCCCAACGAGCAGCGCTGCATGCTCCACCCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 90 bp TGCAATGGCTTCTCGTCCGCCTCCAGGCGCCGGGTAGTCTCTCCATaGAGCTGTACATACAGGGAGGGCGGAGATGTCTTTTGCACGGTC +
Preference number: 5 (lower is better)
Translates to: CNGFSSASRRRVVSP*SCTYREGGDVFCTV
Trigger: GACCGTGCAAAAGACATCTCCGCCCTCCCTGTATGTACAGCTCCATGGAGAGACTACCCGGCGCCTGGAGGCGGACGAGAAGCCATTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 90 bp GATGACCATGTTGACGGATGGTGGGAAGATTCCGGGGCTGGGTGGTaGCATGCTCCCTCCAGCACTGAGCTCACAGCAGCAGAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: DDHVDGWWEDSGAGW*HAPSSTELTAAEAV
Trigger: GACAGCTTCTGCTGCTGTGAGCTCAGTGCTGGAGGGAGCATGCCACCACCCAGCCCCGGAATCTTCCCACCATCCGTCAACATGGTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 90 bp GTCAGGGTAAAGGATCCTCCCAGGTCCACAGGGTCAGGCTTGATGTaGCAGAGGACAGCAGCACCACCAAGTTTCTGCCCAGCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: VRVKDPPRSTGSGLM*QRTAAPPSFCPAVP
Trigger: GGGAACTGCTGGGCAGAAACTTGGTGGTGCTGCTGTCCTCTGCCACATCAAGCCTGACCCTGTGGACCTGGGAGGATCCTTTACCCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 90 bp GCTGTCCCACAGCCCTTTGCTGCCCAGGATGAAAAACTCATCCTGTaGAGTCAGAAGCACCGACTGCACATGGGGGCGAGGCACCACACT +
Preference number: 5 (lower is better)
Translates to: AVPQPFAAQDEKLIL*SQKHRLHMGARHHT
Trigger: AGTGTGGTGCCTCGCCCCCATGTGCAGTCGGTGCTTCTGACTCCACAGGATGAGTTTTTCATCCTGGGCAGCAAAGGGCTGTGGGACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 90 bp CTTGATGACCATGTTGACGGATGGTGGGAAGATTCCGGGGCTGGGTaGTGGCATGCTCCCTCCAGCACTGAGCTCACAGCAGCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: LDDHVDGWWEDSGAG*WHAPSSTELTAAEA
Trigger: AGCTTCTGCTGCTGTGAGCTCAGTGCTGGAGGGAGCATGCCACCACCCAGCCCCGGAATCTTCCCACCATCCGTCAACATGGTCATCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 90 bp CCTGGCTTCCGGAGAGGCGCATCTGCAGCAACCTCTATCACATTATaGCTCCTTTCCTGGGGAGCTACAGAGCCATTAGCCCTGCGTCGT +
Preference number: 5 (lower is better)
Translates to: PGFRRGASAATSITL*LLSWGATEPLALRR
Trigger: ACGACGCAGGGCTAATGGCTCTGTAGCTCCCCAGGAAAGGAGCCATAATGTGATAGAGGTTGCTGCAGATGCGCCTCTCCGGAAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 90 bp TTGGCACTGATGACAATGCCCTCATCACTGGCCTCAGCTGGCACCTaGAGTAGGTGCTGCTGTCTCTCCTTTTCCTTGGCCCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LALMTMPSSLASAGT*SRCCCLSFSLALLQ
Trigger: CTGCAGCAGGGCCAAGGAAAAGGAGAGACAGCAGCACCTACTTCAGGTGCCAGCTGAGGCCAGTGATGAGGGCATTGTCATCAGTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 90 bp CTCCCCAAATCCCAGTTGGAAGAGGTAGTCATTTTGGATCTGCAATaGCTTCTCGTCCGCCTCCAGGCGCCGGGTAGTCTCTCCATGGAG +
Preference number: 5 (lower is better)
Translates to: LPKSQLEEVVILDLQ*LLVRLQAPGSLSME
Trigger: CTCCATGGAGAGACTACCCGGCGCCTGGAGGCGGACGAGAAGCCATTGCAGATCCAAAATGACTACCTCTTCCAACTGGGATTTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 90 bp AGAGGCGCATCTGCAGCAACCTCTATCACATTATGGCTCCTTTCCTaGGGAGCTACAGAGCCATTAGCCCTGCGTCGTCCAATGGTTCCC +
Preference number: 5 (lower is better)
Translates to: RGASAATSITLWLLS*GATEPLALRRPMVP
Trigger: GGGAACCATTGGACGACGCAGGGCTAATGGCTCTGTAGCTCCCCAGGAAAGGAGCCATAATGTGATAGAGGTTGCTGCAGATGCGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp GGCTGTGTCCTTATGCAAGACTACAAACACTTTAAGCTTCACTATGTAACACTGCGCCGCCGCCAGGGCTaGGTCCTCACCCGTGGGGTC +
Preference number: 5 (lower is better)
Translates to: GCVLMQDYKHFKLHYVTLRRRQG*VLTRGV
Trigger: GACCCCACGGGTGAGGACCAAGCCCTGGCGGCGGCG...CAGTGTTACATAGTGAAGCTTAAAGTGTTTGTAGTCTTGCATAAGGACACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 90 bp GCTCAGAGCTCCCAGTGCTATGAGGCTTTCCTGCATAGAATCGAATaGGACAGCCAATCTCTGAGTCCATGCCTTCCTCCTGCACCCTCC +
Preference number: 5 (lower is better)
Translates to: AQSSQCYEAFLHRIE*DSQSLSPCLPPAPS
Trigger: GGAGGGTGCAGGAGGAAGGCATGGACTCAGAGATTGGCTGTCTCATTCGATTCTATGCAGGAAAGCCTCATAGCACTGGGAGCTCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 90 bp CTGATCATCTGGATCTGGCTGAGCAGGGGCTGCAAAATAGCCTCCTaGCTTCCGGAGAGGCGCATCTGCAGCAACCTCTATCACATTATG +
Preference number: 5 (lower is better)
Translates to: LIIWIWLSRGCKIAS*LPERRICSNLYHIM
Trigger: CATAATGTGATAGAGGTTGCTGCAGATGCGCCTCTCCGGAAGCCAGGAGGCTATTTTGCAGCCCCTGCTCAGCCAGATCCAGATGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp CGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATGGTACCACCCCGCCGCCTTaGTGGCCCAGCTGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: RHVHLGILLPYNSGCVDGTTPPP*WPSCRS
Trigger: GCTTCTGCAGCTGGGCCACAAAGGCGGCGGGGTGGT...ACCATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp CAGGGAGGCTCTTCAGAGCGAGTAAGGGGTCAGTTATTTAGGCTGTGTCCTTATTCAACCCGGCTGCCGTaGCTGAACACCCCCTCAATG +
Preference number: 5 (lower is better)
Translates to: QGGSSERVRGQLFRLCPYSTRLP*LNTPSM
Trigger: CATTGAGGGGGTGTTCAGCAACGGCAGCCGGGTTGA...ATAAGGACACAGCCTAAATAACTGACCCCTTACTCGCTCTGAAGAGCCTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 90 bp CGCTGTCTTTCACGGACGACACTATCAAGCACGTCCCGCACAGAATaGCCTGTCGTCTTGTCCATCGGTTCACTGGCAACTGCATTTTGC +
Preference number: 5 (lower is better)
Translates to: RCLSRTTLSSTSRTE*PVVLSIGSLATAFC
Trigger: GCAAAATGCAGTTGCCAGTGAACCGATGGACAAGACGACAGGTCATTCTGTGCGGGACGTGCTTGATAGTGTCGTCCGTGAAAGACAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 90 bp TTGTGGTCCAGGGCAAGGCGTGGATTTCCAGTCAGGTCTAGCTCCTaGAGCTTAGGTGGCAGGTTTTCTGGTAACGTGATTTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: LWSRARRGFPVRSSS*SLGGRFSGNVISLS
Trigger: GCTGAGTGAAATCACGTTACCAGAAAACCTGCCACCTAAGCTGCAGGAGCTAGACCTGACTGGAAATCCACGCCTTGCCCTGGACCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 90 bp GACCTGGACAGAGACAGTGGCTTCCCATTTCGACAGAGAACCGTTTaGCACTTGCCAACATTAGCAGAGGTCAGGGTAAAGGATCCTCCC +
Preference number: 5 (lower is better)
Translates to: DLDRDSGFPFRQRTV*HLPTLAEVRVKDPP
Trigger: GGGAGGATCCTTTACCCTGACCTCTGCTAATGTTGGCAAGTGCCAAACGGTTCTCTGTCGAAATGGGAAGCCACTGTCTCTGTCCAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp TCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCCCACAGAAAAGTCTGCCTTCTaGGACAGACCTGACTCATCC +
Preference number: 5 (lower is better)
Translates to: SREQGHIICTETRCTWPTEKSAF*DRPDSS
Trigger: GGATGAGTCAGGTCTGTCCAAGAAGGCAGACTTTTC...TGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 90 bp GTGATGCAACCTTGGAGACTTGCCGCAGCCACCGTAAGTACTCCGTaGAAGTATCAAAGCAGATGTAGTAAGTCTGGCTTTGAGGCCCCG +
Preference number: 5 (lower is better)
Translates to: VMQPWRLAAATVSTP*KYQSRCSKSGFEAP
Trigger: CGGGGCCTCAAAGCCAGACTTACTACATCTGCTTTGATACTTTCACGGAGTACTTACGGTGGCTGCGGCAAGTCTCCAAGGTTGCATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 90 bp TCAATCTTGAAGCAGCGAATGTTATTGAGCAGCTCCAGGCTTTTGTaGTCCAGGGCAAGGCGTGGATTTCCAGTCAGGTCTAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SILKQRMLLSSSRLL*SRARRGFPVRSSSC
Trigger: GCAGGAGCTAGACCTGACTGGAAATCCACGCCTTGCCCTGGACCACAAAAGCCTGGAGCTGCTCAATAACATTCGCTGCTTCAAGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 90 bp GCAGGGCATTGCAAGATACATTCAGCTCTGCTAGGGTTGGAATGCTaGAGACTGCTGACGGAAAGGCTCCTAGGTGGTTATTGGAAAGGT +
Preference number: 5 (lower is better)
Translates to: AGHCKIHSALLGLEC*RLLTERLLGGYWKG
Trigger: ACCTTTCCAATAACCACCTAGGAGCCTTTCCGTCAGCAGTCTGCAGCATTCCAACCCTAGCAGAGCTGAATGTATCTTGCAATGCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 90 bp CTCGCAGGGCATTGCAAGATACATTCAGCTCTGCTAGGGTTGGAATaGTGCAGACTGCTGACGGAAAGGCTCCTAGGTGGTTATTGGAAA +
Preference number: 5 (lower is better)
Translates to: LAGHCKIHSALLGLE*CRLLTERLLGGYWK
Trigger: TTTCCAATAACCACCTAGGAGCCTTTCCGTCAGCAGTCTGCAGCATTCCAACCCTAGCAGAGCTGAATGTATCTTGCAATGCCCTGCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 90 bp TCCATCCAGCAGAAACGTCTGCAAGTTCTGCATATCTCCAACAGCTaGTGGGACTTCTCGCAGGGCATTGCAAGATACATTCAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: SIQQKRLQVLHISNS*WDFSQGIARYIQLC
Trigger: GCAGAGCTGAATGTATCTTGCAATGCCCTGCGAGAAGTCCCAGCAGCTGTTGGAGATATGCAGAACTTGCAGACGTTTCTGCTGGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 90 bp TCAGCAGGAAGGGACTGGAGAAAATTTCCATCCAGCAGAAACGTCTaGAAGTTCTGCATATCTCCAACAGCTGCTGGGACTTCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: SAGRDWRKFPSSRNV*KFCISPTAAGTSRR
Trigger: CCTGCGAGAAGTCCCAGCAGCTGTTGGAGATATGCAGAACTTGCAGACGTTTCTGCTGGATGGAAATTTTCTCCAGTCCCTTCCTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp TGTAGATGGTATAAGGGACTCTATACAGTCATGCTGATTGTGGCAGCAGGAAGGGCCTTTCAGGAAGCCTaGCCAACCGGTTGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: CRWYKGLYTVMLIVAAGRAFQEA*PTGCVL
Trigger: CAGGACACAACCGGTTGGCAAGGCTTCCTGAAAGGC...CCTTCCTGCTGCCACAATCAGCATGACTGTATAGAGTCCCTTATACCATCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 90 bp TCTTCAGACGGGGGTGCCCTGTTAACAAGGGCACACACTTATCCGTaGGGCAGTTGTTTGTCAGGTACAACTCCTGTAATATACTGCTCG +
Preference number: 5 (lower is better)
Translates to: SSDGGALLTRAHTYP*GSCLSGTTPVIYCS
Trigger: CGAGCAGTATATTACAGGAGTTGTACCTGACAAACAACTGCCTCACGGATAAGTGTGTGCCCTTGTTAACAGGGCACCCCCGTCTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 90 bp GTGCTGCTTAATCCTCTTCCGCTCTTCTTCACAGCTCATGATGTATaGCCTGGACAGAGACAGTGGCTTCCCATTTCGACAGAGAACCGT +
Preference number: 5 (lower is better)
Translates to: VLLNPLPLFFTAHDV*PGQRQWLPISTENR
Trigger: ACGGTTCTCTGTCGAAATGGGAAGCCACTGTCTCTGTCCAGGTCATACATCATGAGCTGTGAAGAAGAGCGGAAGAGGATTAAGCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 90 bp GAGAGGTCTACTGAGCTTATACGCTGTGATGCAACCTTGGAGACTTaGCGCAGCCACCGTAAGTACTCCGTGAAAGTATCAAAGCAGATG +
Preference number: 5 (lower is better)
Translates to: ERSTELIRCDATLET*RSHRKYSVKVSKQM
Trigger: CATCTGCTTTGATACTTTCACGGAGTACTTACGGTGGCTGCGGCAAGTCTCCAAGGTTGCATCACAGCGTATAAGCTCAGTAGACCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 90 bp AGGGACTGGAGAAAATTTCCATCCAGCAGAAACGTCTGCAAGTTCTaGATATCTCCAACAGCTGCTGGGACTTCTCGCAGGGCATTGCAA +
Preference number: 5 (lower is better)
Translates to: RDWRKFPSSRNVCKF*ISPTAAGTSRRALQ
Trigger: TTGCAATGCCCTGCGAGAAGTCCCAGCAGCTGTTGGAGATATGCAGAACTTGCAGACGTTTCTGCTGGATGGAAATTTTCTCCAGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 90 bp CTCCTGGTGATGTTTCATGATTTCTTTGACTTCCTCTTCCAGCTCTaGGGGGATGATAAACTGATCATCTGGATCTGGCTGAGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LLVMFHDFFDFLFQL*GDDKLIIWIWLSRG
Trigger: GCCCCTGCTCAGCCAGATCCAGATGATCAGTTTATCATCCCCCCAGAGCTGGAAGAGGAAGTCAAAGAAATCATGAAACATCACCAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp TATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTAGGAAGCAGCGAATGTTATaGAGCAGCTCCAGGCTTTTG +
Preference number: 5 (lower is better)
Translates to: YLHRNTLHMAHTEDELRRKQRML*SSSRLL
Trigger: CAAAAGCCTGGAGCTGCTCAATAACATTCGCTGCTT...CCTACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp TCTGTAAAAGGTTCTGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACGACTCTGTCACTCCATaGACCTTGCCATCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: SVKGSGFPRTGPHYLHRNDSVTP*TLPSSV
Trigger: CACTGAGGATGGCAAGGTCAATGGAGTGACAGAGTC...GTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCAGAACCTTTTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp TGTAGATGGTATAAGGGACTCTATACAGTCATGCTGATTGTGGCAGCAGGAAGGAGCCTTGCCAACCGGTaGTGTCCTGCTAGCAATTTC +
Preference number: 5 (lower is better)
Translates to: CRWYKGLYTVMLIVAAGRSLANR*CPASNF
Trigger: GAAATTGCTAGCAGGACACAACCGGTTGGCAAGGCT...CCTTCCTGCTGCCACAATCAGCATGACTGTATAGAGTCCCTTATACCATCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp TGGGTTCCCGAGAACAGGGCCACATTATCTGCACAGAAACACGCTGCACATGGCTGTTTCATGATTTCTTaGACTTCCTCTTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: WVPENRATLSAQKHAAHGCFMIS*TSSSSS
Trigger: AGAGCTGGAAGAGGAAGTCAAAGAAATCATGAAACA...GCCATGTGCAGCGTGTTTCTGTGCAGATAATGTGGCCCTGTTCTCGGGAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 90 bp GTCACTCCATTGACCTTGCCATCCTCAGTGATGATGGCTTTGTGCTaGTTAATCCTCTTCCGCTCTTCTTCACAGCTCATGATGTATGAC +
Preference number: 5 (lower is better)
Translates to: VTPLTLPSSVMMALC*LILFRSSSQLMMYD
Trigger: GTCATACATCATGAGCTGTGAAGAAGAGCGGAAGAGGATTAAGCAGCACAAAGCCATCATCACTGAGGATGGCAAGGTCAATGGAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 90 bp TCAGGTACAACTCCTGTAATATACTGCTCGTCTCCTCAGAAAGTGTaGCTGGAGGCAGGGTTTCCAGTTTGTTTGCAGATGCATTCAGGA +
Preference number: 5 (lower is better)
Translates to: SGTTPVIYCSSPQKV*LEAGFPVCLQMHSG
Trigger: TCCTGAATGCATCTGCAAACAAACTGGAAACCCTGCCTCCAGCCACACTTTCTGAGGAGACGAGCAGTATATTACAGGAGTTGTACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp CGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATGGTAGCTCAGTGATCTGGTaGTGCTGGACATCCAAGACC +
Preference number: 5 (lower is better)
Translates to: RHVHLGILLPYNSGCVDGSSVIW*CWTSKT
Trigger: GGTCTTGGATGTCCAGCACAACCAGATCACTGAGCT...ACCATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 90 bp TCTGGGAGCTGCATAACTTCAGGAAAGACTTCGATACAATTGGAGTaGGCAATCACGGTGTGCATGCGTCTGCAGTTCATGATTGTTGTG +
Preference number: 5 (lower is better)
Translates to: SGSCITSGKTSIQLE*AITVCMRLQFMIVV
Trigger: CACAACAATCATGAACTGCAGACGCATGCACACCGTGATTGCTCACTCCAATTGTATCGAAGTCTTTCCTGAAGTTATGCAGCTCCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp CGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATGGTTCGACAGAGAACCGTTaGGCACTTGCCAACATTAGC +
Preference number: 5 (lower is better)
Translates to: RHVHLGILLPYNSGCVDGSTENR*ALANIS
Trigger: GCTAATGTTGGCAAGTGCCAAACGGTTCTCTGTCGA...ACCATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp AAATTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTATCACTGTCAAGGCCGTaGTCAGAGAACGCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: KLRHVHLGILLPYNSGCVSLSRP*SENALE
Trigger: CTCCAGCGCGTTCTCTGACAACGGCCTTGACAGTGA...TACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp TTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATGTAGTAAGTCTGGCTTaGAGGCCCCGAAGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: LRHVHLGILLPYNSGCVDVVSLA*RPRRAE
Trigger: TTCAGCTCTTCGGGGCCTCAAAGCCAGACTTACTAC...ATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp TGTAGATGGTATAAGGGACTCTATACAGTCATGCTGATTGTGGCAGCAGGAAGGGGGTTTCCAGTTTGTTaGCAGATGCATTCAGGAATC +
Preference number: 5 (lower is better)
Translates to: CRWYKGLYTVMLIVAAGRGFPVC*QMHSGI
Trigger: GATTCCTGAATGCATCTGCAAACAAACTGGAAACCC...CCTTCCTGCTGCCACAATCAGCATGACTGTATAGAGTCCCTTATACCATCTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp CGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATGGTTTATCCGTGAGGCAGTaGTTTGTCAGGTACAACTCC +
Preference number: 5 (lower is better)
Translates to: RHVHLGILLPYNSGCVDGLSVRQ*FVRYNS
Trigger: GGAGTTGTACCTGACAAACAACTGCCTCACGGATAA...ACCATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp TATCTGCACAGAAACACGCTGCACATGGCCCACACTGAAGATGAGCTACGTAGGAGTTCCCAGTTTCCTTaGCATGACTATGAATGTATT +
Preference number: 5 (lower is better)
Translates to: YLHRNTLHMAHTEDELRRSSQFP*HDYECI
Trigger: AATACATTCATAGTCATGCAAAGGAAACTGGGAACT...CCTACGTAGCTCATCTTCAGTGTGGGCCATGTGCAGCGTGTTTCTGTGCAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 90 bp ATCATAGCATCTAGATCACCAAGCTTATTGTCTCGCAGGTCAAGCTaGGTGACATGTTGCACAAAGTCCACCTCATCTGCCATAAGCTTT +
Preference number: 5 (lower is better)
Translates to: IIASRSPSLLSRRSS*VTCCTKSTSSAISF
Trigger: AAAGCTTATGGCAGATGAGGTGGACTTTGTGCAACATGTCACTCAGCTTGACCTGCGAGACAATAAGCTTGGTGATCTAGATGCTATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 90 bp AGCCATACACAGCTTATCCACAGCAGTCAGCTTCTCCAATACCTCTaGAATGTCAGTGAATTCATTAAAGGAAAGACCCAGATAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SHTQLIHSSQLLQYL*NVSEFIKGKTQIAE
Trigger: CTCAGCTATCTGGGTCTTTCCTTTAATGAATTCACTGACATTCCAGAGGTATTGGAGAAGCTGACTGCTGTGGATAAGCTGTGTATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp TCACCTGACAGAGTAAAGCAACTCCTAGGAGTTAGTCGCCATATTCTACAAATGGAAGAGGTAGTCATTTaGGATCTGCAATGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: SPDRVKQLLGVSRHILQMEEVVI*DLQWLL
Trigger: GAGAAGCCATTGCAGATCCAAAATGACTACCTCTTC...CATTTGTAGAATATGGCGACTAACTCCTAGGAGTTGCTTTACTCTGTCAGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp GGCTGTGTCCTTATGCAAGACTACAAACACTTTAAGCTTCACTATGTAACACTGCTCCCCAAATCCCAGTaGGAAGAGGTAGTCATTTTG +
Preference number: 5 (lower is better)
Translates to: GCVLMQDYKHFKLHYVTLLPKSQ*EEVVIL
Trigger: CAAAATGACTACCTCTTCCAACTGGGATTTGGGGAG...CAGTGTTACATAGTGAAGCTTAAAGTGTTTGTAGTCTTGCATAAGGACACAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp TCACCTGACAGAGTAAAGCAACTCCTAGGAGTTAGTCGCCATATTCTACAAATGACTGGCAACTGCATTTaGCCTTTTCGGACATTGTAC +
Preference number: 5 (lower is better)
Translates to: SPDRVKQLLGVSRHILQMTGNCI*PFRTLY
Trigger: GTACAATGTCCGAAAAGGCAAAATGCAGTTGCCAGT...CATTTGTAGAATATGGCGACTAACTCCTAGGAGTTGCTTTACTCTGTCAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp TTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATACTTCTCGCAGGGCATaGCAAGATACATTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: LRHVHLGILLPYNSGCVDTSRRA*QDTFSS
Trigger: AGAGCTGAATGTATCTTGCAATGCCCTGCGAGAAGT...ATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp TTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGATGACGGCTGGTCAATCTaGAAGCAGCGAATGTTATTG +
Preference number: 5 (lower is better)
Translates to: LRHVHLGILLPYNSGCVDDGWSI*KQRMLL
Trigger: CAATAACATTCGCTGCTTCAAGATTGACCAGCCGTC...ATCTACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp AAATTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAAGAACCGTTTGGCACTaGCCAACATTAGCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: KLRHVHLGILLPYNSGCVRTVWH*PTLAEV
Trigger: GACCTCTGCTAATGTTGGCAAGTGCCAAACGGTTCT...TACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp AAATTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGTCACTCCATTGACCTaGCCATCCTCAGTGATGATG +
Preference number: 5 (lower is better)
Translates to: KLRHVHLGILLPYNSGCVVTPLT*PSSVMM
Trigger: CATCATCACTGAGGATGGCAAGGTCAATGGAGTGAC...TACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp AAATTACGACATGTCCATTTGGGCATTCTGCTTCCATATAACTCTGGATGTGTAGCTCCTAGGTGGTTATaGGAAAGGTTAAGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: KLRHVHLGILLPYNSGCVAPRWL*ERLRLF
Trigger: GAAGAGCCTTAACCTTTCCAATAACCACCTAGGAGC...TACACATCCAGAGTTATATGGAAGCAGAATGCCCAAATGGACATGTCGTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS-3UTR CAA 90 bp GGCTGTGTCCTTATGCAAGACTACAAACACTTTAAGCTTCACTATGTAACACTGTCAGTGATGATGGCTTaGTGCTGCTTAATCCTCTTC +
Preference number: 5 (lower is better)
Translates to: GCVLMQDYKHFKLHYVTLSVMMA*CCLILF
Trigger: GAAGAGGATTAAGCAGCACAAAGCCATCATCACTGA...CAGTGTTACATAGTGAAGCTTAAAGTGTTTGTAGTCTTGCATAAGGACACAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 90 bp CGGAGACTACTATTACAAAACAGGCGGGCAGGAAGTTCACATATTTaGTTATGGCCAATATCCAAAACTTCTAATTTCCGGCTTTCACAT +
Preference number: 5 (lower is better)
Translates to: RRLLLQNRRAGSSHI*LWPISKTSNFRLSH
Trigger: ATGTGAAAGCCGGAAATTAGAAGTTTTGGATATTGGCCATAATCAAATATGTGAACTTCCTGCCCGCCTGTTTTGTAATAGTAGTCTCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 72 bp GCCGCCGCCGCCGCTGCTGTAGGGGTCCAGCCGGTCTaGCACGCTCTCGGCGCTGGGGCTCAGGCTGAAGCT +
Preference number: 6 (lower is better)
Translates to: AAAAAAVGVQPV*HALGAGAQAEA
Trigger: AGCTTCAGCCTGAGCCCCAGCGCCGAGAGCGTGTCAGACCGGCTGGACCCCTACAGCAGCGGCGGCGGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp GCCGGGCCGCCACCTCGGCGGCCGTGGTGTCCAGCGTaGAGAGCACTGGGCGCAGGTAGGACGAGGCCATGT +
Preference number: 6 (lower is better)
Translates to: AGPPPRRPWCPA*RALGAGRTRPC
Trigger: ACATGGCCTCGTCCTACCTGCGCCCAGTGCTCTGCACGCTGGACACCACGGCCGCCGAGGTGGCGGCCCGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp AGCACCTTCACCACCCCGCCGCCTTTGTGGCCCAGCTaGAGAAGCCGGGCCGCCACCTCGGCGGCCGTGGTG +
Preference number: 6 (lower is better)
Translates to: STFTTPPPLWPS*RSRAATSAAVV
Trigger: CACCACGGCCGCCGAGGTGGCGGCCCGGCTTCTGCAGCTGGGCCACAAAGGCGGCGGGGTGGTGAAGGTGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 72 bp CCAGCTGCAGAAGCCGGGCCGCCACCTCGGCGGCCGTaGTGTCCAGCGTGCAGAGCACTGGGCGCAGGTAGG +
Preference number: 6 (lower is better)
Translates to: PAAEAGPPPRRP*CPACRALGAGR
Trigger: CCTACCTGCGCCCAGTGCTCTGCACGCTGGACACCACGGCCGCCGAGGTGGCGGCCCGGCTTCTGCAGCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp GCTTCAGGAGCAGCGTCTTCCTGTCCAGGCTCCGGGTaGACAGCGACGCCGAGGCCGAGCAGGACGCCGGGA +
Preference number: 6 (lower is better)
Translates to: ASGAASSCPGSG*TATPRPSRTPG
Trigger: TCCCGGCGTCCTGCTCGGCCTCGGCGTCGCTGTGCACCCGGAGCCTGGACAGGAAGACGCTGCTCCTGAAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 72 bp GCCCCGGACAGCACCAACAGTGCCGCTCGAGGGCGGTaGCTCCACGTCCCTTCCGTGCTCTCCGTCCAGGGT +
Preference number: 6 (lower is better)
Translates to: APDSTNSAARGR*LHVPSVLSVQG
Trigger: ACCCTGGACGGAGAGCACGGAAGGGACGTGGAGCCACCGCCCTCGAGCGGCACTGTTGGTGCTGTCCGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp CCCCGAAGTCGACAGAGGAACGTCCGGAGCTGCGGCTaGCATCGCCTTATCGTCTCCGGGACCCTCGCCCGC +
Preference number: 6 (lower is better)
Translates to: PRSRQRNVRSCG*HRLIVSGTLAR
Trigger: GCGGGCGAGGGTCCCGGAGACGATAAGGCGATGGCAGCCGCAGCTCCGGACGTTCCTCTGTCGACTTCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 72 bp TGGCGGTCAAAGACGTGCACACAGCCCCGCTGGAGCTaGTGCCTCACCCAGTCCCTGTCCGACGGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: WRSKTCTQPRWS*CLTQSLSDGCS
Trigger: GCTGCAGCCGTCGGACAGGGACTGGGTGAGGCACCAGCTCCAGCGGGGCTGTGTGCACGTCTTTGACCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 72 bp CACCTCGGCGGCCGTGGTGTCCAGCGTGCAGAGCACTaGGCGCAGGTAGGACGAGGCCATGTGGCGGTCAAA +
Preference number: 6 (lower is better)
Translates to: HLGGRGVQRAEH*AQVGRGHVAVK
Trigger: TTTGACCGCCACATGGCCTCGTCCTACCTGCGCCCAGTGCTCTGCACGCTGGACACCACGGCCGCCGAGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp ACGCCAGTGCTGTCTACGCCCGTCGGGGCTTTCGGCTaGAGTAAAGCCGAGGTCTTCGGGGAAGGCGGCCGA +
Preference number: 6 (lower is better)
Translates to: TPVLSTPVGAFG*SKAEVFGEGGR
Trigger: TCGGCCGCCTTCCCCGAAGACCTCGGCTTTACTGCAGCCGAAAGCCCCGACGGGCGTAGACAGCACTGGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp GGAGCATGCAGCGCTGCTCGTTGGGGTAGGCAGGGCTaGTCTCATTCAGGACTCCAGACGGGGGCTCATCAG +
Preference number: 6 (lower is better)
Translates to: GACSAARWGRQG*SHSGLQTGAHQ
Trigger: CTGATGAGCCCCCGTCTGGAGTCCTGAATGAGAGCAGCCCTGCCTACCCCAACGAGCAGCGCTGCATGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 72 bp GTTGACGGATGGTGGGAAGATTCCGGGGCTGGGTGGTaGCATGCTCCCTCCAGCACTGAGCTCACAGCAGCA +
Preference number: 6 (lower is better)
Translates to: VDGWWEDSGAGW*HAPSSTELTAA
Trigger: TGCTGCTGTGAGCTCAGTGCTGGAGGGAGCATGCCACCACCCAGCCCCGGAATCTTCCCACCATCCGTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 72 bp ACAGGCAGACAGGGTGGAGCATGCAGCGCTGCTCGTTaGGGTAGGCAGGGCTGCTCTCATTCAGGACTCCAG +
Preference number: 6 (lower is better)
Translates to: TGRQGGACSAAR*GRQGCSHSGLQ
Trigger: CTGGAGTCCTGAATGAGAGCAGCCCTGCCTACCCCAACGAGCAGCGCTGCATGCTCCACCCTGTCTGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 72 bp CATGTTGACGGATGGTGGGAAGATTCCGGGGCTGGGTaGTGGCATGCTCCCTCCAGCACTGAGCTCACAGCA +
Preference number: 6 (lower is better)
Translates to: HVDGWWEDSGAG*WHAPSSTELTA
Trigger: TGCTGTGAGCTCAGTGCTGGAGGGAGCATGCCACCACCCAGCCCCGGAATCTTCCCACCATCCGTCAACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp CCCAGCCCATCTGAGGGTCGGTCCTTGATGACCATGTaGACGGATGGTGGGAAGATTCCGGGGCTGGGTGGT +
Preference number: 6 (lower is better)
Translates to: PSPSEGRSLMTM*TDGGKIPGLGG
Trigger: ACCACCCAGCCCCGGAATCTTCCCACCATCCGTCAACATGGTCATCAAGGACCGACCCTCAGATGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 90 bp GCAGAGGTCAGGGTAAAGGATCCTCCCAGGTCCACAGGGTCAGGCTaGATGTGGCAGAGGACAGCAGCACCACCAAGTTTCTGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: AEVRVKDPPRSTGSG*MWQRTAAPPSFCPA
Trigger: TGCTGGGCAGAAACTTGGTGGTGCTGCTGTCCTCTGCCACATCAAGCCTGACCCTGTGGACCTGGGAGGATCCTTTACCCTGACCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp CATCTCGGAGGTAGACAGTTCACTGCTGATCTCAGATaGCATGCCACTGCTGGAGGATGGCACACCCAGCCC +
Preference number: 6 (lower is better)
Translates to: HLGGRQFTADLR*HATAGGWHTQP
Trigger: GGGCTGGGTGTGCCATCCTCCAGCAGTGGCATGGCATCTGAGATCAGCAGTGAACTGTCTACCTCCGAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 72 bp CAGCCCTTTGCTGCCCAGGATGAAAAACTCATCCTGTaGAGTCAGAAGCACCGACTGCACATGGGGGCGAGG +
Preference number: 6 (lower is better)
Translates to: QPFAAQDEKLIL*SQKHRLHMGAR
Trigger: CCTCGCCCCCATGTGCAGTCGGTGCTTCTGACTCCACAGGATGAGTTTTTCATCCTGGGCAGCAAAGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 72 bp TCCCAGTTGGAAGAGGTAGTCATTTTGGATCTGCAATaGCTTCTCGTCCGCCTCCAGGCGCCGGGTAGTCTC +
Preference number: 6 (lower is better)
Translates to: SQLEEVVILDLQ*LLVRLQAPGSL
Trigger: GAGACTACCCGGCGCCTGGAGGCGGACGAGAAGCCATTGCAGATCCAAAATGACTACCTCTTCCAACTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp AGGGTAAAGGATCCTCCCAGGTCCACAGGGTCAGGCTaGATGTGGCAGAGGACAGCAGCACCACCAAGTTTC +
Preference number: 6 (lower is better)
Translates to: RVKDPPRSTGSG*MWQRTAAPPSF
Trigger: GAAACTTGGTGGTGCTGCTGTCCTCTGCCACATCAAGCCTGACCCTGTGGACCTGGGAGGATCCTTTACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 72 bp ATGACAATGCCCTCATCACTGGCCTCAGCTGGCACCTaGAGTAGGTGCTGCTGTCTCTCCTTTTCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: MTMPSSLASAGT*SRCCCLSFSLA
Trigger: GGCCAAGGAAAAGGAGAGACAGCAGCACCTACTTCAGGTGCCAGCTGAGGCCAGTGATGAGGGCATTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp CCCTCAATGGGTTCTTCATCGTCACTGTCAAGGCCGTaGTCAGAGAACGCGCTGGAGAAAGTAGCGCTGGAC +
Preference number: 6 (lower is better)
Translates to: PSMGSSSSLSRP*SENALEKVALD
Trigger: GTCCAGCGCTACTTTCTCCAGCGCGTTCTCTGACAACGGCCTTGACAGTGACGATGAAGAACCCATTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 90 bp ACTGCTGGGGCTCCTGATGCATCTCCTGCTGACGGCTGGTCAATCTaGAAGCAGCGAATGTTATTGAGCAGCTCCAGGCTTTTGTGGTCC +
Preference number: 6 (lower is better)
Translates to: TAGAPDASPADGWSI*KQRMLLSSSRLLWS
Trigger: GGACCACAAAAGCCTGGAGCTGCTCAATAACATTCGCTGCTTCAAGATTGACCAGCCGTCAGCAGGAGATGCATCAGGAGCCCCAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 72 bp TCACGGACGACACTATCAAGCACGTCCCGCACAGAATaGCCTGTCGTCTTGTCCATCGGTTCACTGGCAACT +
Preference number: 6 (lower is better)
Translates to: SRTTLSSTSRTE*PVVLSIGSLAT
Trigger: AGTTGCCAGTGAACCGATGGACAAGACGACAGGTCATTCTGTGCGGGACGTGCTTGATAGTGTCGTCCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 72 bp ACTGCTGGGGCTCCTGATGCATCTCCTGCTGACGGCTaGTCAATCTTGAAGCAGCGAATGTTATTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: TAGAPDASPADG*SILKQRMLLSS
Trigger: GCTGCTCAATAACATTCGCTGCTTCAAGATTGACCAGCCGTCAGCAGGAGATGCATCAGGAGCCCCAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 72 bp TCTGCAGCAACCTCTATCACATTATGGCTCCTTTCCTaGGGAGCTACAGAGCCATTAGCCCTGCGTCGTCCA +
Preference number: 6 (lower is better)
Translates to: SAATSITLWLLS*GATEPLALRRP
Trigger: TGGACGACGCAGGGCTAATGGCTCTGTAGCTCCCCAGGAAAGGAGCCATAATGTGATAGAGGTTGCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp GAGAGGTCTACTGAGCTTATACGCTGTGATGCAACCTaGGAGACTTGCCGCAGCCACCGTAAGTACTCCGTG +
Preference number: 6 (lower is better)
Translates to: ERSTELIRCDAT*ETCRSHRKYSV
Trigger: CACGGAGTACTTACGGTGGCTGCGGCAAGTCTCCAAGGTTGCATCACAGCGTATAAGCTCAGTAGACCTCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp GCTGACGGCTGGTCAATCTTGAAGCAGCGAATGTTATaGAGCAGCTCCAGGCTTTTGTGGTCCAGGGCAAGG +
Preference number: 6 (lower is better)
Translates to: ADGWSILKQRML*SSSRLLWSRAR
Trigger: CCTTGCCCTGGACCACAAAAGCCTGGAGCTGCTCAATAACATTCGCTGCTTCAAGATTGACCAGCCGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp CCCAGGATGCGCGTGGACTCTGTCACTCCATTGACCTaGCCATCCTCAGTGATGATGGCTTTGTGCTGCTTA +
Preference number: 6 (lower is better)
Translates to: PRMRVDSVTPLT*PSSVMMALCCL
Trigger: TAAGCAGCACAAAGCCATCATCACTGAGGATGGCAAGGTCAATGGAGTGACAGAGTCCACGCGCATCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp CAGAGCTTCTTAGCAGCAGCCAGAGCATCTGGCACATaGCGTACAGCTTCCACAGCCTCGTCAATGGATAGG +
Preference number: 6 (lower is better)
Translates to: QSFLAAARASGT*RTASTASSMDR
Trigger: CCTATCCATTGACGAGGCTGTGGAAGCTGTACGCAATGTGCCAGATGCTCTGGCTGCTGCTAAGAAGCTCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 90 bp CTGTCAGCCTTCATGAGGAGGTTTGGTGGGAGCTCAGTGATCTGGTaGTGCTGGACATCCAAGACCTCCACAGAAGTTCTCTCCAGCCTT +
Preference number: 6 (lower is better)
Translates to: LSAFMRRFGGSSVIW*CWTSKTSTEVLSSL
Trigger: AAGGCTGGAGAGAACTTCTGTGGAGGTCTTGGATGTCCAGCACAACCAGATCACTGAGCTCCCACCAAACCTCCTCATGAAGGCTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 90 bp GCATCTCCTGCTGACGGCTGGTCAATCTTGAAGCAGCGAATGTTATaGAGCAGCTCCAGGCTTTTGTGGTCCAGGGCAAGGCGTGGATTT +
Preference number: 6 (lower is better)
Translates to: ASPADGWSILKQRML*SSSRLLWSRARRGF
Trigger: AAATCCACGCCTTGCCCTGGACCACAAAAGCCTGGAGCTGCTCAATAACATTCGCTGCTTCAAGATTGACCAGCCGTCAGCAGGAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 90 bp GACAGAGACAGTGGCTTCCCATTTCGACAGAGAACCGTTTGGCACTaGCCAACATTAGCAGAGGTCAGGGTAAAGGATCCTCCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: DRDSGFPFRQRTVWH*PTLAEVRVKDPPRS
Trigger: GGACCTGGGAGGATCCTTTACCCTGACCTCTGCTAATGTTGGCAAGTGCCAAACGGTTCTCTGTCGAAATGGGAAGCCACTGTCTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp AGGGCAAGGCGTGGATTTCCAGTCAGGTCTAGCTCCTaGAGCTTAGGTGGCAGGTTTTCTGGTAACGTGATT +
Preference number: 6 (lower is better)
Translates to: RARRGFPVRSSS*SLGGRFSGNVI
Trigger: AATCACGTTACCAGAAAACCTGCCACCTAAGCTGCAGGAGCTAGACCTGACTGGAAATCCACGCCTTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp TGCAAAATAGCCTCCTGGCTTCCGGAGAGGCGCATCTaGAGCAACCTCTATCACATTATGGCTCCTTTCCTG +
Preference number: 6 (lower is better)
Translates to: CKIASWLPERRI*SNLYHIMAPFL
Trigger: CAGGAAAGGAGCCATAATGTGATAGAGGTTGCTGCAGATGCGCCTCTCCGGAAGCCAGGAGGCTATTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 72 bp AAGCAGCGAATGTTATTGAGCAGCTCCAGGCTTTTGTaGTCCAGGGCAAGGCGTGGATTTCCAGTCAGGTCT +
Preference number: 6 (lower is better)
Translates to: KQRMLLSSSRLL*SRARRGFPVRS
Trigger: AGACCTGACTGGAAATCCACGCCTTGCCCTGGACCACAAAAGCCTGGAGCTGCTCAATAACATTCGCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp TTGAAGCAGCGAATGTTATTGAGCAGCTCCAGGCTTTaGTGGTCCAGGGCAAGGCGTGGATTTCCAGTCAGG +
Preference number: 6 (lower is better)
Translates to: LKQRMLLSSSRL*WSRARRGFPVR
Trigger: CCTGACTGGAAATCCACGCCTTGCCCTGGACCACAAAAGCCTGGAGCTGCTCAATAACATTCGCTGCTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp GCTCCTGATGCATCTCCTGCTGACGGCTGGTCAATCTaGAAGCAGCGAATGTTATTGAGCAGCTCCAGGCTT +
Preference number: 6 (lower is better)
Translates to: APDASPADGWSI*KQRMLLSSSRL
Trigger: AAGCCTGGAGCTGCTCAATAACATTCGCTGCTTCAAGATTGACCAGCCGTCAGCAGGAGATGCATCAGGAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 90 bp TGGTCAATCTTGAAGCAGCGAATGTTATTGAGCAGCTCCAGGCTTTaGTGGTCCAGGGCAAGGCGTGGATTTCCAGTCAGGTCTAGCTCC +
Preference number: 6 (lower is better)
Translates to: WSILKQRMLLSSSRL*WSRARRGFPVRSSS
Trigger: GGAGCTAGACCTGACTGGAAATCCACGCCTTGCCCTGGACCACAAAAGCCTGGAGCTGCTCAATAACATTCGCTGCTTCAAGATTGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 90 bp CGGGGGTGCCCTGTTAACAAGGGCACACACTTATCCGTGAGGCAGTaGTTTGTCAGGTACAACTCCTGTAATATACTGCTCGTCTCCTCA +
Preference number: 6 (lower is better)
Translates to: RGCPVNKGTHLSVRQ*FVRYNSCNILLVSS
Trigger: TGAGGAGACGAGCAGTATATTACAGGAGTTGTACCTGACAAACAACTGCCTCACGGATAAGTGTGTGCCCTTGTTAACAGGGCACCCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp CATTGCAAGATACATTCAGCTCTGCTAGGGTTGGAATaGTGCAGACTGCTGACGGAAAGGCTCCTAGGTGGT +
Preference number: 6 (lower is better)
Translates to: HCKIHSALLGLE*CRLLTERLLGG
Trigger: ACCACCTAGGAGCCTTTCCGTCAGCAGTCTGCAGCATTCCAACCCTAGCAGAGCTGAATGTATCTTGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp TATCTCCAACAGCTGCTGGGACTTCTCGCAGGGCATTaGAAGATACATTCAGCTCTGCTAGGGTTGGAATGC +
Preference number: 6 (lower is better)
Translates to: YLQQLLGLLAGH*KIHSALLGLEC
Trigger: GCATTCCAACCCTAGCAGAGCTGAATGTATCTTGCAATGCCCTGCGAGAAGTCCCAGCAGCTGTTGGAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp GGCAGTTGTTTGTCAGGTACAACTCCTGTAATATACTaGTCGTCTCCTCAGAAAGTGTGGCTGGAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: GSCLSGTTPVIY*SSPQKVWLEAG
Trigger: CCCTGCCTCCAGCCACACTTTCTGAGGAGACGAGCAGTATATTACAGGAGTTGTACCTGACAAACAACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp TTGATGTGGCAGAGGACAGCAGCACCACCAAGTTTCTaGCCAGCAGTTCCCAGTTTCCTTTGCATGACTATG +
Preference number: 6 (lower is better)
Translates to: LMWQRTAAPPSF*PAVPSFLCMTM
Trigger: CATAGTCATGCAAAGGAAACTGGGAACTGCTGGGCAGAAACTTGGTGGTGCTGCTGTCCTCTGCCACATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp TTCATGAGGAGGTTTGGTGGGAGCTCAGTGATCTGGTaGTGCTGGACATCCAAGACCTCCACAGAAGTTCTC +
Preference number: 6 (lower is better)
Translates to: FMRRFGGSSVIW*CWTSKTSTEVL
Trigger: GAGAACTTCTGTGGAGGTCTTGGATGTCCAGCACAACCAGATCACTGAGCTCCCACCAAACCTCCTCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 72 bp TCCCAGTGCTATGAGGCTTTCCTGCATAGAATCGAATaGGACAGCCAATCTCTGAGTCCATGCCTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: SQCYEAFLHRIE*DSQSLSPCLPP
Trigger: AGGAGGAAGGCATGGACTCAGAGATTGGCTGTCTCATTCGATTCTATGCAGGAAAGCCTCATAGCACTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 72 bp GGGGGTGCCCTGTTAACAAGGGCACACACTTATCCGTaGGGCAGTTGTTTGTCAGGTACAACTCCTGTAATA +
Preference number: 6 (lower is better)
Translates to: GGALLTRAHTYP*GSCLSGTTPVI
Trigger: TATTACAGGAGTTGTACCTGACAAACAACTGCCTCACGGATAAGTGTGTGCCCTTGTTAACAGGGCACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 72 bp AGTGAGCAATCACGGTGTGCATGCGTCTGCAGTTCATaGTTGTTGTGGGGATGGCTTTCAGCTTATTCCCAC +
Preference number: 6 (lower is better)
Translates to: SEQSRCACVCSS*LLWGWLSAYSH
Trigger: GTGGGAATAAGCTGAAAGCCATCCCCACAACAATCATGAACTGCAGACGCATGCACACCGTGATTGCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp ACTGAGCTTATACGCTGTGATGCAACCTTGGAGACTTaGCGCAGCCACCGTAAGTACTCCGTGAAAGTATCA +
Preference number: 6 (lower is better)
Translates to: TELIRCDATLET*RSHRKYSVKVS
Trigger: TGATACTTTCACGGAGTACTTACGGTGGCTGCGGCAAGTCTCCAAGGTTGCATCACAGCGTATAAGCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 72 bp AGAGACAGTGGCTTCCCATTTCGACAGAGAACCGTTTaGCACTTGCCAACATTAGCAGAGGTCAGGGTAAAG +
Preference number: 6 (lower is better)
Translates to: RDSGFPFRQRTV*HLPTLAEVRVK
Trigger: CTTTACCCTGACCTCTGCTAATGTTGGCAAGTGCCAAACGGTTCTCTGTCGAAATGGGAAGCCACTGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp ATATCTCCAACAGCTGCTGGGACTTCTCGCAGGGCATaGCAAGATACATTCAGCTCTGCTAGGGTTGGAATG +
Preference number: 6 (lower is better)
Translates to: ISPTAAGTSRRA*QDTFSSARVGM
Trigger: CATTCCAACCCTAGCAGAGCTGAATGTATCTTGCAATGCCCTGCGAGAAGTCCCAGCAGCTGTTGGAGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp GTTCTCTCCAGCCTTTCAGGAAGCCTTGCCAACCGGTaGTGTCCTGCTAGCAATTTCCGGAGACTACTATTA +
Preference number: 6 (lower is better)
Translates to: VLSSLSGSLANR*CPASNFRRLLL
Trigger: TAATAGTAGTCTCCGGAAATTGCTAGCAGGACACAACCGGTTGGCAAGGCTTCCTGAAAGGCTGGAGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp AGTGGCTTCCCATTTCGACAGAGAACCGTTTGGCACTaGCCAACATTAGCAGAGGTCAGGGTAAAGGATCCT +
Preference number: 6 (lower is better)
Translates to: SGFPFRQRTVWH*PTLAEVRVKDP
Trigger: AGGATCCTTTACCCTGACCTCTGCTAATGTTGGCAAGTGCCAAACGGTTCTCTGTCGAAATGGGAAGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp CAGAGACAGTGGCTTCCCATTTCGACAGAGAACCGTTaGGCACTTGCCAACATTAGCAGAGGTCAGGGTAAA +
Preference number: 6 (lower is better)
Translates to: QRQWLPISTENR*ALANISRGQGK
Trigger: TTTACCCTGACCTCTGCTAATGTTGGCAAGTGCCAAACGGTTCTCTGTCGAAATGGGAAGCCACTGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 90 bp TCCACAGAAGTTCTCTCCAGCCTTTCAGGAAGCCTTGCCAACCGGTaGTGTCCTGCTAGCAATTTCCGGAGACTACTATTACAAAACAGG +
Preference number: 6 (lower is better)
Translates to: STEVLSSLSGSLANR*CPASNFRRLLLQNR
Trigger: CCTGTTTTGTAATAGTAGTCTCCGGAAATTGCTAGCAGGACACAACCGGTTGGCAAGGCTTCCTGAAAGGCTGGAGAGAACTTCTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 72 bp AGATGTAGTAAGTCTGGCTTTGAGGCCCCGAAGAGCTaGACGCTAAACAGTGCTGGTGCTTTTTCACTTCCT +
Preference number: 6 (lower is better)
Translates to: RCSKSGFEAPKS*TLNSAGAFSLP
Trigger: AGGAAGTGAAAAAGCACCAGCACTGTTTAGCGTTCAGCTCTTCGGGGCCTCAAAGCCAGACTTACTACATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 72 bp CCTTGGAGACTTGCCGCAGCCACCGTAAGTACTCCGTaGAAGTATCAAAGCAGATGTAGTAAGTCTGGCTTT +
Preference number: 6 (lower is better)
Translates to: PWRLAAATVSTP*KYQSRCSKSGF
Trigger: AAAGCCAGACTTACTACATCTGCTTTGATACTTTCACGGAGTACTTACGGTGGCTGCGGCAAGTCTCCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 72 bp TCTAGATCACCAAGCTTATTGTCTCGCAGGTCAAGCTaGGTGACATGTTGCACAAAGTCCACCTCATCTGCC +
Preference number: 6 (lower is better)
Translates to: SRSPSLLSRRSS*VTCCTKSTSSA
Trigger: GGCAGATGAGGTGGACTTTGTGCAACATGTCACTCAGCTTGACCTGCGAGACAATAAGCTTGGTGATCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 72 bp AATCCTCTTCCGCTCTTCTTCACAGCTCATGATGTATaGCCTGGACAGAGACAGTGGCTTCCCATTTCGACA +
Preference number: 6 (lower is better)
Translates to: NPLPLFFTAHDV*PGQRQWLPIST
Trigger: TGTCGAAATGGGAAGCCACTGTCTCTGTCCAGGTCATACATCATGAGCTGTGAAGAAGAGCGGAAGAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp GTCGTCTTGTCCATCGGTTCACTGGCAACTGCATTTTaGCTTTTCGGACATTGTACATTCCGGAGAGCTGAA +
Preference number: 6 (lower is better)
Translates to: VVLSIGSLATAF*LFGHCTFRRAE
Trigger: TTCAGCTCTCCGGAATGTACAATGTCCGAAAAGGCAAAATGCAGTTGCCAGTGAACCGATGGACAAGACGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp CAGAAACGTCTGCAAGTTCTGCATATCTCCAACAGCTaGTGGGACTTCTCGCAGGGCATTGCAAGATACATT +
Preference number: 6 (lower is better)
Translates to: QKRLQVLHISNS*WDFSQGIARYI
Trigger: AATGTATCTTGCAATGCCCTGCGAGAAGTCCCAGCAGCTGTTGGAGATATGCAGAACTTGCAGACGTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp AGAAAATTTCCATCCAGCAGAAACGTCTGCAAGTTCTaGATATCTCCAACAGCTGCTGGGACTTCTCGCAGG +
Preference number: 6 (lower is better)
Translates to: RKFPSSRNVCKF*ISPTAAGTSRR
Trigger: CCTGCGAGAAGTCCCAGCAGCTGTTGGAGATATGCAGAACTTGCAGACGTTTCTGCTGGATGGAAATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 72 bp GGAATGCTGCAGACTGCTGACGGAAAGGCTCCTAGGTaGTTATTGGAAAGGTTAAGGCTCTTCAATTTGGTG +
Preference number: 6 (lower is better)
Translates to: GMLQTADGKAPR*LLERLRLFNLV
Trigger: CACCAAATTGAAGAGCCTTAACCTTTCCAATAACCACCTAGGAGCCTTTCCGTCAGCAGTCTGCAGCATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp ACTCCATTGACCTTGCCATCCTCAGTGATGATGGCTTaGTGCTGCTTAATCCTCTTCCGCTCTTCTTCACAG +
Preference number: 6 (lower is better)
Translates to: TPLTLPSSVMMA*CCLILFRSSSQ
Trigger: CTGTGAAGAAGAGCGGAAGAGGATTAAGCAGCACAAAGCCATCATCACTGAGGATGGCAAGGTCAATGGAGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 90 bp GTTGGAATGCTGCAGACTGCTGACGGAAAGGCTCCTAGGTGGTTATaGGAAAGGTTAAGGCTCTTCAATTTGGTGAACCTTTGCAGTTCA +
Preference number: 6 (lower is better)
Translates to: VGMLQTADGKAPRWL*ERLRLFNLVNLCSS
Trigger: TGAACTGCAAAGGTTCACCAAATTGAAGAGCCTTAACCTTTCCAATAACCACCTAGGAGCCTTTCCGTCAGCAGTCTGCAGCATTCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp CTGCAGACTGCTGACGGAAAGGCTCCTAGGTGGTTATaGGAAAGGTTAAGGCTCTTCAATTTGGTGAACCTT +
Preference number: 6 (lower is better)
Translates to: LQTADGKAPRWL*ERLRLFNLVNL
Trigger: AAGGTTCACCAAATTGAAGAGCCTTAACCTTTCCAATAACCACCTAGGAGCCTTTCCGTCAGCAGTCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 72 bp TGCATAACTTCAGGAAAGACTTCGATACAATTGGAGTaGGCAATCACGGTGTGCATGCGTCTGCAGTTCATG +
Preference number: 6 (lower is better)
Translates to: CITSGKTSIQLE*AITVCMRLQFM
Trigger: CATGAACTGCAGACGCATGCACACCGTGATTGCTCACTCCAATTGTATCGAAGTCTTTCCTGAAGTTATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp AAGCTTATTGTCTCGCAGGTCAAGCTGAGTGACATGTaGCACAAAGTCCACCTCATCTGCCATAAGCTTTCT +
Preference number: 6 (lower is better)
Translates to: KLIVSQVKLSDM*HKVHLICHKLS
Trigger: AGAAAGCTTATGGCAGATGAGGTGGACTTTGTGCAACATGTCACTCAGCTTGACCTGCGAGACAATAAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CAA 72 bp CCTGTTAACAAGGGCACACACTTATCCGTGAGGCAGTaGTTTGTCAGGTACAACTCCTGTAATATACTGCTC +
Preference number: 6 (lower is better)
Translates to: PVNKGTHLSVRQ*FVRYNSCNILL
Trigger: GAGCAGTATATTACAGGAGTTGTACCTGACAAACAACTGCCTCACGGATAAGTGTGTGCCCTTGTTAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 72 bp CAGCTTATCCACAGCAGTCAGCTTCTCCAATACCTCTaGAATGTCAGTGAATTCATTAAAGGAAAGACCCAG +
Preference number: 6 (lower is better)
Translates to: QLIHSSQLLQYL*NVSEFIKGKTQ
Trigger: CTGGGTCTTTCCTTTAATGAATTCACTGACATTCCAGAGGTATTGGAGAAGCTGACTGCTGTGGATAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS CCA 72 bp ATGTTTCATGATTTCTTTGACTTCCTCTTCCAGCTCTaGGGGGATGATAAACTGATCATCTGGATCTGGCTG +
Preference number: 6 (lower is better)
Translates to: MFHDFFDFLFQL*GDDKLIIWIWL
Trigger: CAGCCAGATCCAGATGATCAGTTTATCATCCCCCCAGAGCTGGAAGAGGAAGTCAAAGAAATCATGAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS GCA 72 bp TTACAGCTCAGATCTACACACTTGACTTCTGGGAGCTaGATAACTTCAGGAAAGACTTCGATACAATTGGAG +
Preference number: 6 (lower is better)
Translates to: LQLRSTHLTSGS*ITSGKTSIQLE
Trigger: CTCCAATTGTATCGAAGTCTTTCCTGAAGTTATGCAGCTCCCAGAAGTCAAGTGTGTAGATCTGAGCTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7
CDS TCA 72 bp CTATTACAAAACAGGCGGGCAGGAAGTTCACATATTTaGTTATGGCCAATATCCAAAACTTCTAATTTCCGG +
Preference number: 6 (lower is better)
Translates to: LLQNRRAGSSHI*LWPISKTSNFR
Trigger: CCGGAAATTAGAAGTTTTGGATATTGGCCATAATCAAATATGTGAACTTCCTGCCCGCCTGTTTTGTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061047.7