RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHLDB1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000048537

Ensembl transcript IDs: ENSMUST00000034611.15, ENSMUST00000123123.2, ENSMUST00000123310.8, ENSMUST00000123406.8, ENSMUST00000128326.8, ENSMUST00000134465.8, ENSMUST00000135436.8, ENSMUST00000138356.8, ENSMUST00000144251.8, ENSMUST00000147495.8, ENSMUST00000148344.8, ENSMUST00000148929.2, ENSMUST00000154723.3, ENSMUST00000156918.8

Found 1035 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTAGGCGCTCCTTCCTCTTGCTCACACTGCGCAGCAACTCAGCCTTaGTCCGCAGCAGCCCTTGGCCGGCCAGCTCCCGCTCCTCCTCCA +
Preference number: 1 (lower is better)
Translates to: LGAPSSCSHCAATQP*SAAALGRPAPAPPP
Trigger: TGGAGGAGGAGCGGGAGCTGGCCGGCCAAGGGCTGCTGCGGAGCAAGGCTGAGTTGCTGCGCAGTGTGAGCAAGAGGAAGGAGCGCCTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR GCA 90 bp CCTGACTGTCCAGTACAGCTAGGCGCTCCTTCCTCTTGCTCACACTaGGCAGCAACTCAGCCTTGCTCCGCAGCAGCCCTTGGCCGGCCA +
Preference number: 1 (lower is better)
Translates to: PDCPVQLGAPSSCSH*AATQPCSAAALGRP
Trigger: TGGCCGGCCAAGGGCTGCTGCGGAGCAAGGCTGAGTTGCTGCGCAGTGTGAGCAAGAGGAAGGAGCGCCTAGCTGTACTGGACAGTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR TCA 90 bp CGCAGCTCAGCAGCCTCTTCAGCCTGCTGGACCCAGGAGGGAACCTaGACTTCTGGACTCCCAGGACCGACAAGGCCTCTCCCTCTTCCT +
Preference number: 1 (lower is better)
Translates to: RSSAASSACWTQEGT*TSGLPGPTRPLPLP
Trigger: AGGAAGAGGGAGAGGCCTTGTCGGTCCTGGGAGTCCAGAAGTTCAGGTTCCCTCCTGGGTCCAGCAGGCTGAAGAGGCTGCTGAGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR CCA 90 bp TGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTaGCCCACAGCCAGAAGCAGTGGGCAAAGCCACAGAGTGGCCATG +
Preference number: 1 (lower is better)
Translates to: CPQAWVGEMMARTLM*PTARSSGQSHRVAM
Trigger: CATGGCCACTCTGTGGCTTTGCCCACTGCTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR TCA 90 bp AGACGCTCTGACTCCTGTACTGCCTGGGCCCGGATCTGCCCAGCCTaGCTGTCCAGTACAGCTAGGCGCTCCTTCCTCTTGCTCACACTG +
Preference number: 1 (lower is better)
Translates to: RRSDSCTAWARICPA*LSSTARRSFLLLTL
Trigger: CAGTGTGAGCAAGAGGAAGGAGCGCCTAGCTGTACTGGACAGTCAGGCTGGGCAGATCCGGGCCCAGGCAGTACAGGAGTCAGAGCGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR GCA 90 bp CACACTGCAGCCGGGAGGAATTCCATCTCCTCCCACCATGTGACATaGCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATG +
Preference number: 1 (lower is better)
Translates to: HTAAGRNSISSHHVT*PQAWVGEMMARTLM
Trigger: CATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTGGGAGGAGATGGAATTCCTCCCGGCTGCAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR CCA 90 bp AGCAGCCTCTTCAGCCTGCTGGACCCAGGAGGGAACCTGAACTTCTaGACTCCCAGGACCGACAAGGCCTCTCCCTCTTCCTTTCCTCTC +
Preference number: 1 (lower is better)
Translates to: SSLFSLLDPGGNLNF*TPRTDKASPSSFPL
Trigger: GAGAGGAAAGGAAGAGGGAGAGGCCTTGTCGGTCCTGGGAGTCCAGAAGTTCAGGTTCCCTCCTGGGTCCAGCAGGCTGAAGAGGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR CCA 90 bp AGTGCCCAGAAACTTCACCCAGAACTCAACCACCCAGGAAGAAGATaGCACACCAAACTCTGGAACCTCTCGGGATCCCCCAACCCCCAC +
Preference number: 1 (lower is better)
Translates to: SAQKLHPELNHPGRR*HTKLWNLSGSPNPH
Trigger: GTGGGGGTTGGGGGATCCCGAGAGGTTCCAGAGTTTGGTGTGCCATCTTCTTCCTGGGTGGTTGAGTTCTGGGTGAAGTTTCTGGGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR TCA 90 bp TGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTaGAGGGAGATTACCACAGCTCAGGGCCTCTGCTTCTGCCCGCCC +
Preference number: 1 (lower is better)
Translates to: WRLILRSPFPSPLGN*REITTAQGLCFCPP
Trigger: GGGCGGGCAGAAGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR GCA 90 bp TGGACTCCCAGGACCGACAAGGCCTCTCCCTCTTCCTTTCCTCTCTaGTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACT +
Preference number: 1 (lower is better)
Translates to: WTPRTDKASPSSFPL*WLFRDWSSIPKHQT
Trigger: AGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAGAGGAAAGGAAGAGGGAGAGGCCTTGTCGGTCCTGGGAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR GCA 90 bp TCAGCCTCCAGGGCCATCCGCTTCAAACCTCTCCAGTTCAGAAAGTaGCCAGAAACTTCACCCAGAACTCAACCACCCAGGAAGAAGATG +
Preference number: 1 (lower is better)
Translates to: SASRAIRFKPLQFRK*PETSPRTQPPRKKM
Trigger: CATCTTCTTCCTGGGTGGTTGAGTTCTGGGTGAAGTTTCTGGGCACTTTCTGAACTGGAGAGGTTTGAAGCGGATGGCCCTGGAGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR CCA 90 bp CAGCCAGCTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTaGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTTCT +
Preference number: 1 (lower is better)
Translates to: QPAGDLSSVLLSHHL*ETEGRLPQLRASAS
Trigger: AGAAGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAGCTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR CAA 90 bp GCTAGGCGCTCCTTCCTCTTGCTCACACTGCGCAGCAACTCAGCCTaGCTCCGCAGCAGCCCTTGGCCGGCCAGCTCCCGCTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: ARRSFLLLTLRSNSA*LRSSPWPASSRSSS
Trigger: GGAGGAGGAGCGGGAGCTGGCCGGCCAAGGGCTGCTGCGGAGCAAGGCTGAGTTGCTGCGCAGTGTGAGCAAGAGGAAGGAGCGCCTAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR-3UTR TCA 90 bp AAGGCCAGTGGCTGTGGAGGGCTGAAGGTCAGCCTCCAGGGCCATCCGCTTCAACCGGGCCAGACGCTCTaGCTCCTGTACTGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: KASGCGGLKVSLQGHPLQPGQTL*LLYCLG
Trigger: GCCCAGGCAGTACAGGAGTCAGAGCGTCTGGCCCGG...TTGAAGCGGATGGCCCTGGAGGCTGACCTTCAGCCCTCCACAGCCACTGGCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR-3UTR CCA 90 bp GCCAGTGGCTGTGGAGGGCTGAAGGTCAGCCTCCAGGGCCATCCGCTTCAAACCGACTCCTGTACTGCCTaGGCCCGGATCTGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: ASGCGGLKVSLQGHPLQTDSCTA*ARICPA
Trigger: GGCTGGGCAGATCCGGGCCCAGGCAGTACAGGAGTC...GGTTTGAAGCGGATGGCCCTGGAGGCTGACCTTCAGCCCTCCACAGCCACTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR-3UTR GCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGCTCTGCACGTGGCTCTaGTCAGGACCCCTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQLCTWL*SGPLPA
Trigger: GGCTGGGAGGGGTCCTGAGCAGAGCCACGTGCAGAG...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCGGGAACCTGAACTTCTaGACTCCCAGGACCGACAAG +
Preference number: 2 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFGNLNF*TPRTDK
Trigger: CTTGTCGGTCCTGGGAGTCCAGAAGTTCAGGTTCCC...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGACAAGCTGGGGTGGGTaGGTGCCGGGACAGAGCCGA +
Preference number: 2 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQTSWGG*VPGQSR
Trigger: TCGGCTCTGTCCCGGCACCCACCCACCCCAGCTTGT...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGGGAGGCAGATGGGGTTaGGGCCTGAGCCGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKGGRWG*GLSRSP
Trigger: TGGGGAGCGGCTCAGGCCCCAACCCCATCTGCCTCC...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR GCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGGCAGCCTCTTCAGCCTaGTGGACCCAGGAGGGAACC +
Preference number: 2 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQAASSA*WTQEGT
Trigger: GGTTCCCTCCTGGGTCCAGCAGGCTGAAGAGGCTGC...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR GCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGCTCTGCACGTGGCTCTaGTCAGGACCCCTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKLCTWL*SGPLPA
Trigger: GGCTGGGAGGGGTCCTGAGCAGAGCCACGTGCAGAG...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGACAAGCTGGGGTGGGTaGGTGCCGGGACAGAGCCGA +
Preference number: 2 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKTSWGG*VPGQSR
Trigger: TCGGCTCTGTCCCGGCACCCACCCACCCCAGCTTGT...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGAGAGGAGGAGGCAGATaGGGTTGGGGCCTGAGCCGC +
Preference number: 2 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKRGGGR*GWGLSR
Trigger: GCGGCTCAGGCCCCAACCCCATCTGCCTCCTCCTCT...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCTTCCTCTTGCTCACACTGCGCAGCAACTCAGCCTTGCTCCGCAGCAGCCCTTACTGCAGGGGCCAGGTaGTCCTGTCCCACCGCTCTC +
Preference number: 2 (lower is better)
Translates to: PSSCSHCAATQPCSAAALTAGAR*SCPTAL
Trigger: GAGAGCGGTGGGACAGGACCACCTGGCCCCTGCAGT...AAGGGCTGCTGCGGAGCAAGGCTGAGTTGCTGCGCAGTGTGAGCAAGAGGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR-3UTR TCA 90 bp GGCTGTGGAGGGCTGAAGGTCAGCCTCCAGGGCCATCCGCTTCAAACCTCTCCACGGATCTGCCCAGCCTaGCTGTCCAGTACAGCTAGG +
Preference number: 2 (lower is better)
Translates to: GCGGLKVSLQGHPLQTSPRICPA*LSSTAR
Trigger: CCTAGCTGTACTGGACAGTCAGGCTGGGCAGATCCG...TGGAGAGGTTTGAAGCGGATGGCCCTGGAGGCTGACCTTCAGCCCTCCACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR-3UTR GCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCGCAGCCTCTTCAGCCTaGTGGACCCAGGAGGGAACC +
Preference number: 2 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLAASSA*WTQEGT
Trigger: GGTTCCCTCCTGGGTCCAGCAGGCTGAAGAGGCTGC...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR GCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGGCAGCCTCTTCAGCCTaGTGGACCCAGGAGGGAACC +
Preference number: 2 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKAASSA*WTQEGT
Trigger: GGTTCCCTCCTGGGTCCAGCAGGCTGAAGAGGCTGC...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAGGCTGGGCTGGGGGCTaGAGACACACTGCAGCCGGG +
Preference number: 2 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGGWAGG*RHTAAG
Trigger: CCCGGCTGCAGTGTGTCTCCAGCCCCCAGCCCAGCC...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGACCCAGGAGGGAACCTaGACTTCTGGACTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQTQEGT*TSGLPG
Trigger: TCCTGGGAGTCCAGAAGTTCAGGTTCCCTCCTGGGT...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGTCTCCTCCCACCATGTaGCATGCCCCCAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGSPPTM*HAPRPG
Trigger: CCCAGGCCTGGGGGCATGTCACATGGTGGGAGGAGA...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGGTCCTGGGGCTGAGCTaGGGAACCCAGGAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGVLGLS*GTQEVQ
Trigger: CTGCACCTCCTGGGTTCCCCAGCTCAGCCCCAGGAC...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCGTCCTGGGGCTGAGCTaGGGAACCCAGGAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFVLGLS*GTQEVQ
Trigger: CTGCACCTCCTGGGTTCCCCAGCTCAGCCCCAGGAC...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGGAGGCAGATGGGGTTaGGGCCTGAGCCGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGGGRWG*GLSRSP
Trigger: TGGGGAGCGGCTCAGGCCCCAACCCCATCTGCCTCC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGGGAGGCAGATGGGGTTaGGGCCTGAGCCGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQGGRWG*GLSRSP
Trigger: TGGGGAGCGGCTCAGGCCCCAACCCCATCTGCCTCC...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGAGAGGAGGAGGCAGATaGGGTTGGGGCCTGAGCCGC +
Preference number: 2 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGRGGGR*GWGLSR
Trigger: GCGGCTCAGGCCCCAACCCCATCTGCCTCCTCCTCT...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCAGAGGAGGAGGCAGATaGGGTTGGGGCCTGAGCCGC +
Preference number: 2 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFRGGGR*GWGLSR
Trigger: GCGGCTCAGGCCCCAACCCCATCTGCCTCCTCCTCT...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGACCCAGGAGGGAACCTaGACTTCTGGACTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKTQEGT*TSGLPG
Trigger: TCCTGGGAGTCCAGAAGTTCAGGTTCCCTCCTGGGT...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGGCTGGACCTCGAAAGTaGCACTTGAGGTCTCTGGTC +
Preference number: 2 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQAGPRK*HLRSLV
Trigger: GACCAGAGACCTCAAGTGTCACTTTCGAGGTCCAGC...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGATCTCCTCCCACCATGTaGCATGCCCCCAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGSPPTM*HAPRPG
Trigger: CCCAGGCCTGGGGGCATGTCACATGGTGGGAGGAGA...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGTCTCCTCCCACCATGTaGCATGCCCCCAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQSPPTM*HAPRPG
Trigger: CCCAGGCCTGGGGGCATGTCACATGGTGGGAGGAGA...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGCTCTGCACGTGGCTCTaGTCAGGACCCCTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQLCTWL*SGPLPA
Trigger: GGCTGGGAGGGGTCCTGAGCAGAGCCACGTGCAGAG...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGTCCTGGGGCTGAGCTaGGGAACCCAGGAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGVLGLS*GTQEVQ
Trigger: CTGCACCTCCTGGGTTCCCCAGCTCAGCCCCAGGAC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGGTCCTGGGGCTGAGCTaGGGAACCCAGGAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQVLGLS*GTQEVQ
Trigger: CTGCACCTCCTGGGTTCCCCAGCTCAGCCCCAGGAC...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGGAGGCAGATGGGGTTaGGGCCTGAGCCGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: SHHLWETEGRLPQLRASAGGRWG*GLSRSP
Trigger: TGGGGAGCGGCTCAGGCCCCAACCCCATCTGCCTCC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGAGAGGAGGAGGCAGATaGGGTTGGGGCCTGAGCCGC +
Preference number: 2 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQRGGGR*GWGLSR
Trigger: GCGGCTCAGGCCCCAACCCCATCTGCCTCCTCCTCT...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCCACAGCCAGAAGCAGTaGGCAAAGCCACAGAGTGGC +
Preference number: 2 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLHSQKQ*AKPQSG
Trigger: GCCACTCTGTGGCTTTGCCCACTGCTTCTGGCTGTG...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCGGGCTTGTAACAGGATaGTGGGGCTGGACCTCGAAA +
Preference number: 2 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLGLVTG*WGWTSK
Trigger: TTTCGAGGTCCAGCCCCATCATCCTGTTACAAGCCC...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTTCTCCTCCCACCATGTaGCATGCCCCCAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: SHHLWETEGRLPQLRASASPPTM*HAPRPG
Trigger: CCCAGGCCTGGGGGCATGTCACATGGTGGGAGGAGA...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR GCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGCAGCCTCTTCAGCCTaGTGGACCCAGGAGGGAACC +
Preference number: 2 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGAASSA*WTQEGT
Trigger: GGTTCCCTCCTGGGTCCAGCAGGCTGAAGAGGCTGC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGGAAAACAAGCTGGGGTaGGTGGGTGCCGGGACAGAG +
Preference number: 2 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGENKLG*VGAGTE
Trigger: CTCTGTCCCGGCACCCACCCACCCCAGCTTGTTTTC...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATGGAGGCAGATGGGGTTaGGGCCTGAGCCGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDGGRWG*GLSRSP
Trigger: TGGGGAGCGGCTCAGGCCCCAACCCCATCTGCCTCC...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCCCCCAGGCCTGGGTTaGAGAGATGATGGCACGTAC +
Preference number: 2 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGPPGLG*RDDGTY
Trigger: GTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAGGCTGGGCTGGGGGCTaGAGACACACTGCAGCCGGG +
Preference number: 2 (lower is better)
Translates to: LETYPPFSFPITFGKLKGGWAGG*RHTAAG
Trigger: CCCGGCTGCAGTGTGTCTCCAGCCCCCAGCCCAGCC...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp GCCAGTGGCTGTGGAGGGCTGAAGGTCAGCCTCCAGGGCCATCCGCTTCAAACCCACCCAGGAAGAAGATaGCACACCAAACTCTGGAAC +
Preference number: 2 (lower is better)
Translates to: ASGCGGLKVSLQGHPLQTHPGRR*HTKLWN
Trigger: GTTCCAGAGTTTGGTGTGCCATCTTCTTCCTGGGTG...GGTTTGAAGCGGATGGCCCTGGAGGCTGACCTTCAGCCCTCCACAGCCACTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR-3UTR GCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGCAGCCTCTTCAGCCTaGTGGACCCAGGAGGGAACC +
Preference number: 2 (lower is better)
Translates to: SHHLWETEGRLPQLRASAAASSA*WTQEGT
Trigger: GGTTCCCTCCTGGGTCCAGCAGGCTGAAGAGGCTGC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR GCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGATCCCACCATGTGACATaGCCCCAGGCCTGGGTTGGA +
Preference number: 2 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGSHHVT*PQAWVG
Trigger: TCCAACCCAGGCCTGGGGGCATGTCACATGGTGGGA...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGTCCCACCATGTGACATaGCCCCAGGCCTGGGTTGGA +
Preference number: 2 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQSHHVT*PQAWVG
Trigger: TCCAACCCAGGCCTGGGGGCATGTCACATGGTGGGA...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR GCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAACAGCTCAGGGCCTCTaGTTCTGCCCGCCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: LETYPPFSFPITFGKLKGTAQGL*FCPPQP
Trigger: GGGCTGGGGCGGGCAGAAGCAGAGGCCCTGAGCTGT...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATGTCCTGGGGCTGAGCTaGGGAACCCAGGAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHVLGLS*GTQEVQ
Trigger: CTGCACCTCCTGGGTTCCCCAGCTCAGCCCCAGGAC...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGTCCTTTCCTCTCTGCTaGCTCTTTAGGGACTGGAGC +
Preference number: 2 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKSFPLC*LFRDWS
Trigger: GCTCCAGTCCCTAAAGAGCCAGCAGAGAGGAAAGGA...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATACAAGCTGGGGTGGGTaGGTGCCGGGACAGAGCCGA +
Preference number: 2 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDTSWGG*VPGQSR
Trigger: TCGGCTCTGTCCCGGCACCCACCCACCCCAGCTTGT...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGGAAAACAAGCTGGGGTaGGTGGGTGCCGGGACAGAG +
Preference number: 2 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQENKLG*VGAGTE
Trigger: CTCTGTCCCGGCACCCACCCACCCCAGCTTGTTTTC...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGAAAACAAGCTGGGGTaGGTGGGTGCCGGGACAGAG +
Preference number: 2 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGENKLG*VGAGTE
Trigger: CTCTGTCCCGGCACCCACCCACCCCAGCTTGTTTTC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCACAGCCAGAAGCAGTaGGCAAAGCCACAGAGTGGC +
Preference number: 2 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFHSQKQ*AKPQSG
Trigger: GCCACTCTGTGGCTTTGCCCACTGCTTCTGGCTGTG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGACCCCCAGGCCTGGGTTaGAGAGATGATGGCACGTAC +
Preference number: 2 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGPPGLG*RDDGTY
Trigger: GTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGG...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGACCCAGGAGGGAACCTaGACTTCTGGACTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQTQEGT*TSGLPG
Trigger: TCCTGGGAGTCCAGAAGTTCAGGTTCCCTCCTGGGT...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGGCAGAGGGGATGAGATaGGAAGGGGATCTTTGGCAG +
Preference number: 2 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGAEGMR*EGDLWQ
Trigger: CTGCCAAAGATCCCCTTCTCATCTCATCCCCTCTGC...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGGCTGGACCTCGAAAGTaGCACTTGAGGTCTCTGGTC +
Preference number: 2 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGAGPRK*HLRSLV
Trigger: GACCAGAGACCTCAAGTGTCACTTTCGAGGTCCAGC...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGGGGCTTGTAACAGGATaGTGGGGCTGGACCTCGAAA +
Preference number: 2 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGGLVTG*WGWTSK
Trigger: TTTCGAGGTCCAGCCCCATCATCCTGTTACAAGCCC...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCGGGCTTGTAACAGGATaGTGGGGCTGGACCTCGAAA +
Preference number: 2 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFGLVTG*WGWTSK
Trigger: TTTCGAGGTCCAGCCCCATCATCCTGTTACAAGCCC...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCCTGGGTTGGAGAGATaGTGGCACGTACCCTCATGT +
Preference number: 2 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFPGLER*WHVPSC
Trigger: ACATGAGGGTACGTGCCATCATCTCTCCAACCCAGG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGTTCCTCTCCCCTCAGTaGTGCTGTCCCTCTGGTCTT +
Preference number: 2 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGFLSPQ*CCPSGL
Trigger: AAGACCAGAGGGACAGCATCACTGAGGGGAGAGGAA...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGAAAACAAGCTGGGGTaGGTGGGTGCCGGGACAGAG +
Preference number: 2 (lower is better)
Translates to: SHHLWETEGRLPQLRASAENKLG*VGAGTE
Trigger: CTCTGTCCCGGCACCCACCCACCCCAGCTTGTTTTC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGGCCACAGAGTGGCCATaGCAATTAGTGTGTAACCAT +
Preference number: 2 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQATEWP*QLVCNH
Trigger: ATGGTTACACACTAATTGCCATGGCCACTCTGTGGC...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAACATGCCCCCAGGCCTaGGTTGGAGAGATGATGGCA +
Preference number: 2 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGTCPQA*VGEMMA
Trigger: TGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGT...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGACATGCCCCCAGGCCTaGGTTGGAGAGATGATGGCA +
Preference number: 2 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQTCPQA*VGEMMA
Trigger: TGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGT...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCTGTCCCTCTGGTCTTaGATCCCAGGACATCATCCC +
Preference number: 2 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGLSLWS*IPGHHP
Trigger: GGGATGATGTCCTGGGATCCAAGACCAGAGGGACAG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTACCCAGGAGGGAACCTaGACTTCTGGACTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: SHHLWETEGRLPQLRASATQEGT*TSGLPG
Trigger: TCCTGGGAGTCCAGAAGTTCAGGTTCCCTCCTGGGT...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAGCTGGACCTCGAAAGTaGCACTTGAGGTCTCTGGTC +
Preference number: 2 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGAGPRK*HLRSLV
Trigger: GACCAGAGACCTCAAGTGTCACTTTCGAGGTCCAGC...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAGGGCTTGTAACAGGATaGTGGGGCTGGACCTCGAAA +
Preference number: 2 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGGLVTG*WGWTSK
Trigger: TTTCGAGGTCCAGCCCCATCATCCTGTTACAAGCCC...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGATTCCTCTCCCCTCAGTaGTGCTGTCCCTCTGGTCTT +
Preference number: 2 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGFLSPQ*CCPSGL
Trigger: AAGACCAGAGGGACAGCATCACTGAGGGGAGAGGAA...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR GCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAGCAGCCTCTTCAGCCTaGTGGACCCAGGAGGGAACC +
Preference number: 2 (lower is better)
Translates to: LETYPPFSFPITFGKLKGAASSA*WTQEGT
Trigger: GGTTCCCTCCTGGGTCCAGCAGGCTGAAGAGGCTGC...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGTCCTTTCCTCTCTGCTaGCTCTTTAGGGACTGGAGC +
Preference number: 2 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGSFPLC*LFRDWS
Trigger: GCTCCAGTCCCTAAAGAGCCAGCAGAGAGGAAAGGA...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGGGAACCTGAACTTCTaGACTCCCAGGACCGACAAG +
Preference number: 2 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGGNLNF*TPRTDK
Trigger: CTTGTCGGTCCTGGGAGTCCAGAAGTTCAGGTTCCC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGGCCACAGAGTGGCCATaGCAATTAGTGTGTAACCAT +
Preference number: 2 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKATEWP*QLVCNH
Trigger: ATGGTTACACACTAATTGCCATGGCCACTCTGTGGC...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTCACAGCCAGAAGCAGTaGGCAAAGCCACAGAGTGGC +
Preference number: 2 (lower is better)
Translates to: SHHLWETEGRLPQLRASAHSQKQ*AKPQSG
Trigger: GCCACTCTGTGGCTTTGCCCACTGCTTCTGGCTGTG...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCTAGTCCTGTTAGAATaGGAGGGCAGACCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGLVLLE*EGRPLS
Trigger: GCTGAGAGGTCTGCCCTCCCATTCTAACAGGACTAG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGCTGGACCTCGAAAGTaGCACTTGAGGTCTCTGGTC +
Preference number: 2 (lower is better)
Translates to: SHHLWETEGRLPQLRASAAGPRK*HLRSLV
Trigger: GACCAGAGACCTCAAGTGTCACTTTCGAGGTCCAGC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTTTCCTCTCCCCTCAGTaGTGCTGTCCCTCTGGTCTT +
Preference number: 2 (lower is better)
Translates to: SHHLWETEGRLPQLRASAFLSPQ*CCPSGL
Trigger: AAGACCAGAGGGACAGCATCACTGAGGGGAGAGGAA...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR GCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCCACAATTTGTCTTCTTaGACAAAAGCCCCGAGGTAC +
Preference number: 2 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLHNLSS*TKAPRY
Trigger: GTACCTCGGGGCTTTTGTGCAAGAAGACAAATTGTG...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR GCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGATCCCACCATGTGACATaGCCCCAGGCCTGGGTTGGA +
Preference number: 2 (lower is better)
Translates to: LETYPPFSFPITFGKLKGSHHVT*PQAWVG
Trigger: TCCAACCCAGGCCTGGGGGCATGTCACATGGTGGGA...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGTCCTTTCCTCTCTGCTaGCTCTTTAGGGACTGGAGC +
Preference number: 2 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQSFPLC*LFRDWS
Trigger: GCTCCAGTCCCTAAAGAGCCAGCAGAGAGGAAAGGA...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGGGAACCTGAACTTCTaGACTCCCAGGACCGACAAG +
Preference number: 2 (lower is better)
Translates to: SHHLWETEGRLPQLRASAGNLNF*TPRTDK
Trigger: CTTGTCGGTCCTGGGAGTCCAGAAGTTCAGGTTCCC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAACCCAGGAGGGAACCTaGACTTCTGGACTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: LETYPPFSFPITFGKLKGTQEGT*TSGLPG
Trigger: TCCTGGGAGTCCAGAAGTTCAGGTTCCCTCCTGGGT...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGGGCAAAGCCACAGAGTaGCCATGGCAATTAGTGTGT +
Preference number: 2 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQGKATE*PWQLVC
Trigger: ACACACTAATTGCCATGGCCACTCTGTGGCTTTGCC...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAGGCAAAGCCACAGAGTaGCCATGGCAATTAGTGTGT +
Preference number: 2 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGGKATE*PWQLVC
Trigger: ACACACTAATTGCCATGGCCACTCTGTGGCTTTGCC...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGACACAGCCAGAAGCAGTaGGCAAAGCCACAGAGTGGC +
Preference number: 2 (lower is better)
Translates to: LETYPPFSFPITFGKLKGHSQKQ*AKPQSG
Trigger: GCCACTCTGTGGCTTTGCCCACTGCTTCTGGCTGTG...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAACATGCCCCCAGGCCTaGGTTGGAGAGATGATGGCA +
Preference number: 2 (lower is better)
Translates to: LETYPPFSFPITFGKLKGTCPQA*VGEMMA
Trigger: TGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGT...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAGCTGGACCTCGAAAGTaGCACTTGAGGTCTCTGGTC +
Preference number: 2 (lower is better)
Translates to: LETYPPFSFPITFGKLKGAGPRK*HLRSLV
Trigger: GACCAGAGACCTCAAGTGTCACTTTCGAGGTCCAGC...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR TCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGATTCCTCTCCCCTCAGTaGTGCTGTCCCTCTGGTCTT +
Preference number: 2 (lower is better)
Translates to: LETYPPFSFPITFGKLKGFLSPQ*CCPSGL
Trigger: AAGACCAGAGGGACAGCATCACTGAGGGGAGAGGAA...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR GCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCACAATTTGTCTTCTTaGACAAAAGCCCCGAGGTAC +
Preference number: 2 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGHNLSS*TKAPRY
Trigger: GTACCTCGGGGCTTTTGTGCAAGAAGACAAATTGTG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATTCCTTTCCTCTCTGCTaGCTCTTTAGGGACTGGAGC +
Preference number: 2 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDSFPLC*LFRDWS
Trigger: GCTCCAGTCCCTAAAGAGCCAGCAGAGAGGAAAGGA...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGATCTTTGGCAGATTCTaGTACCATAGTTTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQIFGRF*YHSLSF
Trigger: AAAGGACAAACTATGGTACCAGAATCTGCCAAAGAT...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGGCAAAGCCACAGAGTaGCCATGGCAATTAGTGTGT +
Preference number: 2 (lower is better)
Translates to: SHHLWETEGRLPQLRASAGKATE*PWQLVC
Trigger: ACACACTAATTGCCATGGCCACTCTGTGGCTTTGCC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGACTGTCCCTCTGGTCTTaGATCCCAGGACATCATCCC +
Preference number: 2 (lower is better)
Translates to: LETYPPFSFPITFGKLKGLSLWS*IPGHHP
Trigger: GGGATGATGTCCTGGGATCCAAGACCAGAGGGACAG...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGCACAATTTGTCTTCTTaGACAAAAGCCCCGAGGTAC +
Preference number: 2 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQHNLSS*TKAPRY
Trigger: GTACCTCGGGGCTTTTGTGCAAGAAGACAAATTGTG...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR GCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATTCTTCCTTTCCTCTCTaGTGGCTCTTTAGGGACTGG +
Preference number: 2 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDSSFPL*WLFRDW
Trigger: CCAGTCCCTAAAGAGCCAGCAGAGAGGAAAGGAAGA...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATCTTTGGCAGATTCTaGTACCATAGTTTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLIFGRF*YHSLSF
Trigger: AAAGGACAAACTATGGTACCAGAATCTGCCAAAGAT...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGACTAGTCCTGTTAGAATaGGAGGGCAGACCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: LETYPPFSFPITFGKLKGLVLLE*EGRPLS
Trigger: GCTGAGAGGTCTGCCCTCCCATTCTAACAGGACTAG...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR GCA 90 bp CCAGTTCAGAAAGTGCCCAGAAACTTCACCCAGAACTCAACCACCCAGGAAGAATTCTCCTTCTCCTTTTaGAGTAGCTGCAGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: PVQKVPRNFTQNSTTQEEFSFSF*SSCRAA
Trigger: TGCTGCCCTGCAGCTACTGCAAAAGGAGAAGGAGAA...TTCTTCCTGGGTGGTTGAGTTCTGGGTGAAGTTTCTGGGCACTTTCTGAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTACCCTTGTTCCTCACTaGGAACTAGTCCTGTTAGAA +
Preference number: 2 (lower is better)
Translates to: SHHLWETEGRLPQLRASATLVPH*ELVLLE
Trigger: TTCTAACAGGACTAGTTCCCAGTGAGGAACAAGGGT...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR GCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATCACAATTTGTCTTCTTaGACAAAAGCCCCGAGGTAC +
Preference number: 2 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDHNLSS*TKAPRY
Trigger: GTACCTCGGGGCTTTTGTGCAAGAAGACAAATTGTG...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAGCCACAGAGTGGCCATaGCAATTAGTGTGTAACCAT +
Preference number: 2 (lower is better)
Translates to: LETYPPFSFPITFGKLKGATEWP*QLVCNH
Trigger: ATGGTTACACACTAATTGCCATGGCCACTCTGTGGC...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAATCTTTGGCAGATTCTaGTACCATAGTTTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGIFGRF*YHSLSF
Trigger: AAAGGACAAACTATGGTACCAGAATCTGCCAAAGAT...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAATCTTTGGCAGATTCTaGTACCATAGTTTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGIFGRF*YHSLSF
Trigger: AAAGGACAAACTATGGTACCAGAATCTGCCAAAGAT...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTATCTTTGGCAGATTCTaGTACCATAGTTTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: SHHLWETEGRLPQLRASAIFGRF*YHSLSF
Trigger: AAAGGACAAACTATGGTACCAGAATCTGCCAAAGAT...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATATCTTTGGCAGATTCTaGTACCATAGTTTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDIFGRF*YHSLSF
Trigger: AAAGGACAAACTATGGTACCAGAATCTGCCAAAGAT...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CAA 90 bp CCTGGGCCCGGATCTGCCCAGCCTGACTGTCCAGTACAGCTAGGCGCTCCTTCCGCTCCGCAGCAGCCCTaGGCCGGCCAGCTCCCGCTC +
Preference number: 3 (lower is better)
Translates to: PGPGSAQPDCPVQLGAPSAPQQP*AGQLPL
Trigger: GAGCGGGAGCTGGCCGGCCAAGGGCTGCTGCGGAGC...GGAAGGAGCGCCTAGCTGTACTGGACAGTCAGGCTGGGCAGATCCGGGCCCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR CCA 72 bp TGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGAGTaGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGC +
Preference number: 3 (lower is better)
Translates to: CPMCHCPQGQAE*QVAGHGVLGLS
Trigger: GCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CAA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGAGGAGGCAGATGGGGTaGGGGCCTGAGCCGCTCCCC +
Preference number: 3 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKRRQMG*GPEPLP
Trigger: GGGGAGCGGCTCAGGCCCCAACCCCATCTGCCTCCT...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR TCA 72 bp CTGCAGGGCAGCATTCTTTTCCCGGGCCAGACGCTCTaGCTCCTGTACTGCCTGGGCCCGGATCTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: LQGSILFPGQTL*LLYCLGPDLPS
Trigger: GCTGGGCAGATCCGGGCCCAGGCAGTACAGGAGTCAGAGCGTCTGGCCCGGGAAAAGAATGCTGCCCTGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR GCA 72 bp TCTAGAGCGTCTGCCTCCCTGTTGTCCGGCAAGTACTaGAGGGGCCAGGTGGTCCTGTCCCACCGCTCTCCT +
Preference number: 3 (lower is better)
Translates to: SRASASLLSGKY*RGQVVLSHRSP
Trigger: AGGAGAGCGGTGGGACAGGACCACCTGGCCCCTGCAGTACTTGCCGGACAACAGGGAGGCAGACGCTCTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR-3UTR CAA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGAGGAGGCAGATGGGGTaGGGGCCTGAGCCGCTCCCC +
Preference number: 3 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGRRQMG*GPEPLP
Trigger: GGGGAGCGGCTCAGGCCCCAACCCCATCTGCCTCCT...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CAA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGAGGAGGCAGATGGGGTaGGGGCCTGAGCCGCTCCCC +
Preference number: 3 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQRRQMG*GPEPLP
Trigger: GGGGAGCGGCTCAGGCCCCAACCCCATCTGCCTCCT...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR TCA 72 bp GCAGCCTCTTCAGCCTGCTGGACCCAGGAGGGAACCTaGACTTCTGGACTCCCAGGACCGACAAGGCCTCTC +
Preference number: 3 (lower is better)
Translates to: AASSACWTQEGT*TSGLPGPTRPL
Trigger: GAGAGGCCTTGTCGGTCCTGGGAGTCCAGAAGTTCAGGTTCCCTCCTGGGTCCAGCAGGCTGAAGAGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR CCA 72 bp CTCCTCCCACCATGTGACATGCCCCCAGGCCTGGGTTaGAGAGATGATGGCACGTACCCTCATGTGGCCCAC +
Preference number: 3 (lower is better)
Translates to: LLPPCDMPPGLG*RDDGTYPHVAH
Trigger: GTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTGGGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR CCA 72 bp ACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTaGGGAGGGCAGGGAAGGTGGCTTAGTGTTAAGGCG +
Preference number: 3 (lower is better)
Translates to: TPNQAQQLRAQC*GGQGRWLSVKA
Trigger: CGCCTTAACACTAAGCCACCTTCCCTGCCCTCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CAA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGCTACATCCCGATCCTTaGCAGCCCCGTGCCCAATGT +
Preference number: 3 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQLHPDP*QPRAQC
Trigger: ACATTGGGCACGGGGCTGCAAAGGATCGGGATGTAG...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CAA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTAGGAGGCAGATGGGGTaGGGGCCTGAGCCGCTCCCC +
Preference number: 3 (lower is better)
Translates to: SHHLWETEGRLPQLRASARRQMG*GPEPLP
Trigger: GGGGAGCGGCTCAGGCCCCAACCCCATCTGCCTCCT...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CAA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATAGGAGGCAGATGGGGTaGGGGCCTGAGCCGCTCCCC +
Preference number: 3 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDRRQMG*GPEPLP
Trigger: GGGGAGCGGCTCAGGCCCCAACCCCATCTGCCTCCT...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CAA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAAGGAGGCAGATGGGGTaGGGGCCTGAGCCGCTCCCC +
Preference number: 3 (lower is better)
Translates to: LETYPPFSFPITFGKLKGRRQMG*GPEPLP
Trigger: GGGGAGCGGCTCAGGCCCCAACCCCATCTGCCTCCT...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CAA 90 bp TCTTGCTCACACTGCGCAGCAACTCAGCCTTGCTCCGCAGCAGCCCTTGGCCGGGGTCCTCAAAGAGCTTaGTCTCAGTCTCTAGAGCGT +
Preference number: 3 (lower is better)
Translates to: SCSHCAATQPCSAAALGRGPQRA*SQSLER
Trigger: ACGCTCTAGAGACTGAGACAAAGCTCTTTGAGGACC...CCGGCCAAGGGCTGCTGCGGAGCAAGGCTGAGTTGCTGCGCAGTGTGAGCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR-3UTR CAA 90 bp GTGCCCAGAAACTTCACCCAGAACTCAACCACCCAGGAAGAAGATGGCACACCACGCAGCAACTCAGCCTaGCTCCGCAGCAGCCCTTGG +
Preference number: 3 (lower is better)
Translates to: VPRNFTQNSTTQEEDGTPRSNSA*LRSSPW
Trigger: CCAAGGGCTGCTGCGGAGCAAGGCTGAGTTGCTGCG...TGGTGTGCCATCTTCTTCCTGGGTGGTTGAGTTCTGGGTGAAGTTTCTGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR-3UTR CAA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCTACATCCCGATCCTTaGCAGCCCCGTGCCCAATGT +
Preference number: 3 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFLHPDP*QPRAQC
Trigger: ACATTGGGCACGGGGCTGCAAAGGATCGGGATGTAG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR GCA 72 bp AGGTACTCAACTACATCCCGATCCTTTGCAGCCCCGTaGCCAATGTGCCACTGTCCCCAGGGACAAGCAGAG +
Preference number: 3 (lower is better)
Translates to: RYSTTSRSFAAP*PMCHCPQGQAE
Trigger: CTCTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGGATGTAGTTGAGTACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR CCA 72 bp CTCAACCACCCAGGAAGAAGATGGCACACCAAACTCTaGAACCTCTCGGGATCCCCCAACCCCCACAACCGA +
Preference number: 3 (lower is better)
Translates to: LNHPGRRWHTKL*NLSGSPNPHNR
Trigger: TCGGTTGTGGGGGTTGGGGGATCCCGAGAGGTTCCAGAGTTTGGTGTGCCATCTTCTTCCTGGGTGGTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR-3UTR CAA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGACTACATCCCGATCCTTaGCAGCCCCGTGCCCAATGT +
Preference number: 3 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGLHPDP*QPRAQC
Trigger: ACATTGGGCACGGGGCTGCAAAGGATCGGGATGTAG...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR TCA 72 bp CCAAAGCTAAGTAAAAGGCCAGTGGCTGTGGAGGGCTaGAGGTCAGCCTCCAGGGCCATCCGCTTCAAACCT +
Preference number: 3 (lower is better)
Translates to: PKLSKRPVAVEG*RSASRAIRFKP
Trigger: AGGTTTGAAGCGGATGGCCCTGGAGGCTGACCTTCAGCCCTCCACAGCCACTGGCCTTTTACTTAGCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR CCA 72 bp TCTCAGCTTCCTCTCCCCTCAGTGATGCTGTCCCTCTaGTCTTGGATCCCAGGACATCATCCCTTCTGGCTC +
Preference number: 3 (lower is better)
Translates to: SQLPLPSVMLSL*SWIPGHHPFWL
Trigger: GAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAGAGGAAGCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR TCA 72 bp ACCATGGTGATGAAGCGGTCACCATGGAGACAAGGATaGCGGGCTTGTAACAGGATGATGGGGCTGGACCTC +
Preference number: 3 (lower is better)
Translates to: TMVMKRSPWRQG*RACNRMMGLDL
Trigger: GAGGTCCAGCCCCATCATCCTGTTACAAGCCCGTCATCCTTGTCTCCATGGTGACCGCTTCATCACCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR GCA 72 bp AGGACCGACAAGGCCTCTCCCTCTTCCTTTCCTCTCTaGTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAG +
Preference number: 3 (lower is better)
Translates to: RTDKASPSSFPL*WLFRDWSSIPK
Trigger: CTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAGAGGAAAGGAAGAGGGAGAGGCCTTGTCGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CAA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATCTACATCCCGATCCTTaGCAGCCCCGTGCCCAATGT +
Preference number: 3 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHLHPDP*QPRAQC
Trigger: ACATTGGGCACGGGGCTGCAAAGGATCGGGATGTAG...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CAA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGAGAAGGGGATCTTaGGCAGATTCTGGTACCATA +
Preference number: 3 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLMRRGS*ADSGTI
Trigger: TATGGTACCAGAATCTGCCAAAGATCCCCTTCTCAT...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR CCA 72 bp AAACTTCACCCAGAACTCAACCACCCAGGAAGAAGATaGCACACCAAACTCTGGAACCTCTCGGGATCCCCC +
Preference number: 3 (lower is better)
Translates to: KLHPELNHPGRR*HTKLWNLSGSP
Trigger: GGGGGATCCCGAGAGGTTCCAGAGTTTGGTGTGCCATCTTCTTCCTGGGTGGTTGAGTTCTGGGTGAAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
3UTR-3UTR CAA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAGCTGTCCCTCTGGTCTaGGATCCCAGGACATCATCC +
Preference number: 3 (lower is better)
Translates to: LETYPPFSFPITFGKLKGAVPLV*DPRTSS
Trigger: GGATGATGTCCTGGGATCCAAGACCAGAGGGACAGC...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR TCA 72 bp ATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTaGAGGGAGATTACCACAGCTCAGGGCCTCTGCTTC +
Preference number: 3 (lower is better)
Translates to: ILRSPFPSPLGN*REITTAQGLCF
Trigger: GAAGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CAA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCACACAATTTGTCTTCTaGCACAAAAGCCCCGAGGTA +
Preference number: 3 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFTQFVF*HKSPEV
Trigger: TACCTCGGGGCTTTTGTGCAAGAAGACAAATTGTGT...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CAA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAATGAGAAGGGGATCTTaGGCAGATTCTGGTACCATA +
Preference number: 3 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGMRRGS*ADSGTI
Trigger: TATGGTACCAGAATCTGCCAAAGATCCCCTTCTCAT...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR-3UTR CAA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTATGAGAAGGGGATCTTaGGCAGATTCTGGTACCATA +
Preference number: 3 (lower is better)
Translates to: SHHLWETEGRLPQLRASAMRRGS*ADSGTI
Trigger: TATGGTACCAGAATCTGCCAAAGATCCCCTTCTCAT...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGGGCCGCTACGGGTCCTaGGCAGGGGGCTGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGGRYGS*AGGWPH
Trigger: ATGCGGCCAGCCCCCTGCCCAGGACCCGTAGCGGCC...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCCAGCGAGGCTCGCTCTaGCTCCCGCTCCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFQRGSL*LPLPLQ
Trigger: CTGCAGGGGGAGCGGGAGGCAGAGCGAGCCTCGCTG...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCGTTGTAGGTGGGCCCTaGGGCCCGGACCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFVVGGP*GPDPCW
Trigger: CCAGCAGGGGTCCGGGCCCCAGGGCCCACCTACAAC...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGGTTGTAGGTGGGCCCTaGGGCCCGGACCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGVVGGP*GPDPCW
Trigger: CCAGCAGGGGTCCGGGCCCCAGGGCCCACCTACAAC...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAGCCAGGGTTGTAGGTaGGCCCTGGGGCCCGGACCC +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGSQGCR*ALGPGP
Trigger: GGGTCCGGGCCCCAGGGCCCACCTACAACCCTGGCT...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCAGCCAGGGTTGTAGGTaGGCCCTGGGGCCCGGACCC +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFSQGCR*ALGPGP
Trigger: GGGTCCGGGCCCCAGGGCCCACCTACAACCCTGGCT...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGTCAGGTGAAGTCCCGTaGGCTGCCCAGCGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQSGEVP*AAQRRG
Trigger: GCCCCGGCGCTGGGCAGCCCACGGGACTTCACCTGA...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCCGCTACGGGTCCTaGGCAGGGGGCTGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWGRYGS*AGGWPH
Trigger: ATGCGGCCAGCCCCCTGCCCAGGACCCGTAGCGGCC...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGCCGGGCCAGACGCTCTaGCTCCTGTACTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQPGQTL*LLYCLG
Trigger: GCCCAGGCAGTACAGGAGTCAGAGCGTCTGGCCCGG...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGCCGGGCCAGACGCTCTaGCTCCTGTACTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGPGQTL*LLYCLG
Trigger: GCCCAGGCAGTACAGGAGTCAGAGCGTCTGGCCCGG...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCCCGGGCCAGACGCTCTaGCTCCTGTACTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFPGQTL*LLYCLG
Trigger: GCCCAGGCAGTACAGGAGTCAGAGCGTCTGGCCCGG...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGGCATCCCACTGGCACTaGGCCTCTGCCGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQASHWH*ASAAAF
Trigger: GAAGGCGGCGGCAGAGGCTCAGTGCCAGTGGGATGC...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGACAGCGAGGCTCGCTCTaGCTCCCGCTCCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGQRGSL*LPLPLQ
Trigger: CTGCAGGGGGAGCGGGAGGCAGAGCGAGCCTCGCTG...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAAGCCAGGGTTGTAGGTaGGCCCTGGGGCCCGGACCC +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGSQGCR*ALGPGP
Trigger: GGGTCCGGGCCCCAGGGCCCACCTACAACCCTGGCT...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCGCGGGCAGGCACCAATaGGGGCACAGAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFAGRHQ*GHRGSW
Trigger: CCAGGACCCTCTGTGCCCCCATTGGTGCCTGCCCGC...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGGCGGGCAGGCACCAATaGGGGCACAGAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQAGRHQ*GHRGSW
Trigger: CCAGGACCCTCTGTGCCCCCATTGGTGCCTGCCCGC...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGTCCCGGAGCCGCTCTTaGCGCTGCCGACGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGSRSRS*RCRRWY
Trigger: GTACCACCGTCGGCAGCGCCAAGAGCGGCTCCGGGA...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCTCCCGGAGCCGCTCTTaGCGCTGCCGACGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFSRSRS*RCRRWY
Trigger: GTACCACCGTCGGCAGCGCCAAGAGCGGCTCCGGGA...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGCATCCCACTGGCACTaGGCCTCTGCCGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWASHWH*ASAAAF
Trigger: GAAGGCGGCGGCAGAGGCTCAGTGCCAGTGGGATGC...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGGCTACCCTTGCGAGGTaGCAGGGACTCCCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQATLAR*QGLPEG
Trigger: ACCCTCGGGGAGTCCCTGGCACCTCGCAAGGGTAGC...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCGCTACCCTTGCGAGGTaGCAGGGACTCCCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFATLAR*QGLPEG
Trigger: ACCCTCGGGGAGTCCCTGGCACCTCGCAAGGGTAGC...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGCCACCAGCTGCTGCCTaGGGGCGCTCTCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGPPAAA*GRSHSA
Trigger: TGCAGAGTGAGAGCGCCCGCAGGCAGCAGCTGGTGG...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGTCCCGCTCCACCTGCTaGCTCCTGGCTCCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGSRSTC*LLAPVS
Trigger: GCTGACTGGAGCCAGGAGGCAGCAGGTGGAGCGGGA...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138356.8
CDS-3UTR CCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGGCCGGGGACTCTCAGTaGTTCTGCGGGCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGAGDSQ*FCGPQP
Trigger: TGGCTGAGGCCCGCAGAACCACTGAGAGTCCCCGGC...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGGGCTGCCAGGAATACTaGCGGGTTGGCTGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQGCQEY*RVGCGH
Trigger: GTGCCCGCAGCCAACCCGCCAGTATTCCTGGCAGCC...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGGGCTGCCAGGAATACTaGCGGGTTGGCTGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGGCQEY*RVGCGH
Trigger: GTGCCCGCAGCCAACCCGCCAGTATTCCTGGCAGCC...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGTCCCGGAGCCGCTCTTaGCGCTGCCGACGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWSRSRS*RCRRWY
Trigger: GTACCACCGTCGGCAGCGCCAAGAGCGGCTCCGGGA...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCGACTCCTGTACTGCCTaGGCCCGGATCTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFDSCTA*ARICPA
Trigger: GGCTGGGCAGATCCGGGCCCAGGCAGTACAGGAGTC...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGGACTCCTGTACTGCCTaGGCCCGGATCTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQDSCTA*ARICPA
Trigger: GGCTGGGCAGATCCGGGCCCAGGCAGTACAGGAGTC...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGGGCCGCTACGGGTCCTaGGCAGGGGGCTGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTEGRYGS*AGGWPH
Trigger: ATGCGGCCAGCCCCCTGCCCAGGACCCGTAGCGGCC...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGCCAGGAAGGCAGGCCTaGCGAAGGGCTTGGGGGCAT +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGPGRQA*RRAWGH
Trigger: ATGCCCCCAAGCCCTTCGCCAGGCCTGCCTTCCTGG...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000135436.8
ENSMUST00000138356.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGCCAGGAAGGCAGGCCTaGCGAAGGGCTTGGGGGCAT +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQPGRQA*RRAWGH
Trigger: ATGCCCCCAAGCCCTTCGCCAGGCCTGCCTTCCTGG...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000135436.8
ENSMUST00000138356.8
CDS-3UTR TCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGACATGCAGCCCTGAGTaGGCCGGGTGGGCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWTCSPE*AGWAAE
Trigger: TTCGGCAGCCCACCCGGCTCACTCAGGGCTGCATGT...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGCACAACATGCAGCCCTaGGTGAGCCGGGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWHNMQP*VSRVGC
Trigger: GCAGCCCACCCGGCTCACTCAGGGCTGCATGTTGTG...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGGGAGAAGTCCTCAGGTaGAGTCCCGTGGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQGEVLR*SPVGCP
Trigger: TGGGCAGCCCACGGGACTTCACCTGAGGACTTCTCC...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGTCCTGCCAAGCCTCTTaGGGGCCTCCTGCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQSCQAS*GPPACQ
Trigger: TTGGCAGGCAGGAGGCCCTCAAGAGGCTTGGCAGGA...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAGCTACCCTTGCGAGGTaGCAGGGACTCCCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGATLAR*QGLPEG
Trigger: ACCCTCGGGGAGTCCCTGGCACCTCGCAAGGGTAGC...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGAGCCGCTCTTGGCGCTaGCGACGGTGGTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQSRSWR*RRWYSR
Trigger: TCTGGAGTACCACCGTCGGCAGCGCCAAGAGCGGCT...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGTCTCGGGCTGCCTCCTaGAGCTGCTGTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQSRAAS*SCCSSS
Trigger: GGAGCTGGAACAGCAGCTGCAGGAGGCAGCCCGAGA...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGCTCCCCCTGCAGCAGTaGTCTCTCCATCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGLPLQQ*SLHLGL
Trigger: GAGGCCGAGATGGAGAGAGCACTGCTGCAGGGGGAG...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCCTCCCCCTGCAGCAGTaGTCTCTCCATCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFLPLQQ*SLHLGL
Trigger: GAGGCCGAGATGGAGAGAGCACTGCTGCAGGGGGAG...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCCTGGCACTGAGCCTCTaGCGCCGCCTTCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFLALSL*RRLLLQ
Trigger: CTGAAGCAGAAGGCGGCGGCAGAGGCTCAGTGCCAG...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGACCACCAGCTGCTGCCTaGGGGCGCTCTCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGPPAAA*GRSHSA
Trigger: TGCAGAGTGAGAGCGCCCGCAGGCAGCAGCTGGTGG...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGAGCCAGGGTTGTAGGTaGGCCCTGGGGCCCGGACCC +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTESQGCR*ALGPGP
Trigger: GGGTCCGGGCCCCAGGGCCCACCTACAACCCTGGCT...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGACCAGGGAACTGTGGCTaGCACAGGCTGACGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGPGNCG*HRLTVP
Trigger: GGGCACCGTCAGCCTGTGCCAGCCACAGTTCCCTGG...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGTGGAGCCCACAGACATaGCACCGGGGCTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQWSPQT*HRGWLE
Trigger: CTCCAACCAGCCCCGGTGCCATGTCTGTGGGCTCCA...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGCCAGGAATACTaGCGGGTTGGCTGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWGCQEY*RVGCGH
Trigger: GTGCCCGCAGCCAACCCGCCAGTATTCCTGGCAGCC...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGGCTCACGGAAAGGACTaGGAGGGCGGTCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQAHGKD*EGGPGV
Trigger: CACTCCAGGACCGCCCTCCCAGTCCTTTCCGTGAGC...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGCCCGCAAGTCCCCACTaGAGAGCTTCCGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGPASPH*RASAEH
Trigger: GTGCTCAGCGGAAGCTCTCCAGTGGGGACTTGCGGG...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGGCTGACGGGAAGCTTTaGCAGGCAAAGGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGADGKL*QAKAGE
Trigger: CTCCCCCGCCTTTGCCTGCCAAAGCTTCCCGTCAGC...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGCCATCCAGATGCGCATaGCCTCTGCAGACGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGPSRCA*PLQTGP
Trigger: TGGCCCCGTCTGCAGAGGCCATGCGCATCTGGATGG...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCCCATCCAGATGCGCATaGCCTCTGCAGACGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFPSRCA*PLQTGP
Trigger: TGGCCCCGTCTGCAGAGGCCATGCGCATCTGGATGG...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGGTGGCTGGCACAGGCTaGCGGTGCCCGGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQVAGTG*RCPGCR
Trigger: CCTGCAACCCGGGCACCGTCAGCCTGTGCCAGCCAC...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGTCCGCTGCTGGCTGGTaGGGAAAGTGGAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQSAAGW*GKWREG
Trigger: GCCTTCTCTCCACTTTCCTCACCAGCCAGCAGCGGA...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCTCCGCTGCTGGCTGGTaGGGAAAGTGGAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFSAAGW*GKWREG
Trigger: GCCTTCTCTCCACTTTCCTCACCAGCCAGCAGCGGA...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGCTGGGAGGTCTCTCATaGCCCCCTTTTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGLGGLS*PPFLPS
Trigger: GCTGGGCAGAAAAGGGGGTCATGAGAGACCTCCCAG...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGATCCTGCCAAGCCTCTTaGGGGCCTCCTGCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGSCQAS*GPPACQ
Trigger: TTGGCAGGCAGGAGGCCCTCAAGAGGCTTGGCAGGA...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGTCCTGCCAAGCCTCTTaGGGGCCTCCTGCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWSCQAS*GPPACQ
Trigger: TTGGCAGGCAGGAGGCCCTCAAGAGGCTTGGCAGGA...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGCGGATCTGCCCAGCCTaGCTGTCCAGTACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGRICPA*LSSTAR
Trigger: CCTAGCTGTACTGGACAGTCAGGCTGGGCAGATCCG...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGCCGGGCCAGACGCTCTaGCTCCTGTACTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQPGQTL*LLYCLG
Trigger: GCCCAGGCAGTACAGGAGTCAGAGCGTCTGGCCCGG...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGCCGGGCCAGACGCTCTaGCTCCTGTACTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTEPGQTL*LLYCLG
Trigger: GCCCAGGCAGTACAGGAGTCAGAGCGTCTGGCCCGG...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGGCATCCCACTGGCACTaGGCCTCTGCCGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQASHWH*ASAAAF
Trigger: GAAGGCGGCGGCAGAGGCTCAGTGCCAGTGGGATGC...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGCCAGGCCTGGACCCTaGAGTGAGATGTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWARPGP*SEMSLA
Trigger: AGCCAGGGACATCTCACTGCAGGGTCCAGGCCTGGC...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR GCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAAGCCGCTCTTGGCGCTaGCGACGGTGGTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGSRSWR*RRWYSR
Trigger: TCTGGAGTACCACCGTCGGCAGCGCCAAGAGCGGCT...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGCATCAGAGCGCTCCATaGTCTCCCACAGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWHQSAP*SPTGAG
Trigger: CCCAGCGCCTGTGGGAGAGCATGGAGCGCTCTGATG...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGCTCCCCCTGCAGCAGTaGTCTCTCCATCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWLPLQQ*SLHLGL
Trigger: GAGGCCGAGATGGAGAGAGCACTGCTGCAGGGGGAG...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCGTGTGGCTGCCAGGTTaGGAGGAAGGCTACTGGTGC +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFVWLPG*EEGYWC
Trigger: GCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACAC...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGGTGTGGCTGCCAGGTTaGGAGGAAGGCTACTGGTGC +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQVWLPG*EEGYWC
Trigger: GCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACAC...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGGTCCTGCAGTGTGGCTaGCAGGTTGCGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGVLQCG*QVARKA
Trigger: AGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGAC...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCGTCCTGCAGTGTGGCTaGCAGGTTGCGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFVLQCG*QVARKA
Trigger: AGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGAC...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGCTGGCACTGAGCCTCTaGCGCCGCCTTCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWLALSL*RRLLLQ
Trigger: CTGAAGCAGAAGGCGGCGGCAGAGGCTCAGTGCCAG...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGACTGGCACTGAGCCTCTaGCGCCGCCTTCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGLALSL*RRLLLQ
Trigger: CTGAAGCAGAAGGCGGCGGCAGAGGCTCAGTGCCAG...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCTCTTTCTCCACCAGCTaGTGCCTGCGGGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFSFSTS*CLRALS
Trigger: TGAGAGCGCCCGCAGGCAGCAGCTGGTGGAGAAAGA...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGCTCACCAGGGAACTGTaGCTGGCACAGGCTGACGGT +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQLTREL*LAQADG
Trigger: ACCGTCAGCCTGTGCCAGCCACAGTTCCCTGGTGAG...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGTGGAGCCCACAGACATaGCACCGGGGCTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWWSPQT*HRGWLE
Trigger: CTCCAACCAGCCCCGGTGCCATGTCTGTGGGCTCCA...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGGGAGCGGGAACCACTTaGGCGAGACTGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQGAGTT*ARLWRL
Trigger: CAACCTCCACAGTCTCGCCCAAGTGGTTCCCGCTCC...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGTCGGGGAGCAGGCACTaGAGACTGGAACTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGSGSRH*RLELGA
Trigger: AGCCCCAAGTTCCAGTCTCCAGTGCCTGCTCCCCGA...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCTACCCGCTCTGTGCCTaGGGGCTCACGGAAAGGACT +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFYPLCA*GLTERT
Trigger: AGTCCTTTCCGTGAGCCCCCAGGCACAGAGCGGGTA...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGGGACTCTCAGGCGGCTaGAGGGTACGAGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQGLSGG*RVRVAA
Trigger: AGCAGCAACTCGTACCCTCCAGCCGCCTGAGAGTCC...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCATGGTCTCCAGGCGCTaGCGTTCCAGCCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFMVSRR*RSSLSI
Trigger: GATGGAGAGGCTGGAACGCCAGCGCCTGGAGACCAT...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGATGGTCTCCAGGCGCTaGCGTTCCAGCCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQMVSRR*RSSLSI
Trigger: GATGGAGAGGCTGGAACGCCAGCGCCTGGAGACCAT...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCGGCCGCTACGGGTCCTaGGCAGGGGGCTGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLGRYGS*AGGWPH
Trigger: ATGCGGCCAGCCCCCTGCCCAGGACCCGTAGCGGCC...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCGGGCCAGCTGGCGCTTaGTCTCAATGTCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFGPAGA*SQCPAV
Trigger: CACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCC...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGGGGCCAGCTGGCGCTTaGTCTCAATGTCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQGPAGA*SQCPAV
Trigger: CACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCC...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGCACTTGGTGTCCTGCTaGGTCTTCAGGTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGHLVSC*VFRWEG
Trigger: CCCCTCCCACCTGAAGACCCAGCAGGACACCAAGTG...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000128326.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCCACAAGGGTACAGGGTaGGAGTGCCCCGCAGATTCT +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFHKGTG*ECPADS
Trigger: AGAATCTGCGGGGCACTCTCACCCTGTACCCTTGTG...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGACGGATCTGCCCAGCCTaGCTGTCCAGTACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGRICPA*LSSTAR
Trigger: CCTAGCTGTACTGGACAGTCAGGCTGGGCAGATCCG...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GCGTCTGCCTCCCTGTTGTCCGGCAAGTACTGCAGGGGCCAGGTGGTCCTGTCCGGGGGCTGGTGGAACTaGCCCTTCTCAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ASASLLSGKYCRGQVVLSGGWWN*PFSAAP
Trigger: AGGAGCAGCTGAGAAGGGTCAGTTCCACCAGCCCCC...GGACAGGACCACCTGGCCCCTGCAGTACTTGCCGGACAACAGGGAGGCAGACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
CDS-3UTR GCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCGGTCCTGGAGTGTaGCGATCTTGTTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWGGPGV*RSCFGE
Trigger: CTCCCCGAAACAAGATCGGCACACTCCAGGACCGCC...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAGGCGGTCCTGGAGTGTaGCGATCTTGTTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGGGPGV*RSCFGE
Trigger: CTCCCCGAAACAAGATCGGCACACTCCAGGACCGCC...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGTTAGTACCCGCTCTGTaGCTGGGGGCTCACGGAAAG +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQLVPAL*LGAHGK
Trigger: CTTTCCGTGAGCCCCCAGGCACAGAGCGGGTACTAA...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCCATGCTCCTGCTGGGTaGTCTCGGTGCTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFHAPAG*SRCCCI
Trigger: AATGCAGCAGCACCGAGAGCACCCAGCAGGAGCATG...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGACCAGGAGCGTCTTCATaGTCCTGCTGGGTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGPGASS*SCWVLS
Trigger: CGAGAGCACCCAGCAGGAGCATGAAGACGCTCCTGG...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGGCTGCCTCCTGCAGCTaGTGTTCCAGCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGAASCS*CSSSFT
Trigger: AGTGAAGGAGCTGGAACAGCAGCTGCAGGAGGCAGC...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGGCCTCCCGCTCCCCCTaGAGCAGTGCTCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQASRSP*SSALSI
Trigger: GATGGAGAGAGCACTGCTGCAGGGGGAGCGGGAGGC...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGCAGCGAGGCTCGCTCTaGCTCCCGCTCCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKQRGSL*LPLPLQ
Trigger: CTGCAGGGGGAGCGGGAGGCAGAGCGAGCCTCGCTG...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGACTTGGTGTCCCTTTTaGTGTAGGGCCAGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGTWCPF*CRASWR
Trigger: GCGCCAGCTGGCCCTACAGCAAAAGGGACACCAAGT...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCACTTGGTGTCCCTTTTaGTGTAGGGCCAGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFTWCPF*CRASWR
Trigger: GCGCCAGCTGGCCCTACAGCAAAAGGGACACCAAGT...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGACTTGGTGTCCCTTTTaGTGTAGGGCCAGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQTWCPF*CRASWR
Trigger: GCGCCAGCTGGCCCTACAGCAAAAGGGACACCAAGT...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGCCACCAGCTGCTGCCTaGGGGCGCTCTCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTEPPAAA*GRSHSA
Trigger: TGCAGAGTGAGAGCGCCCGCAGGCAGCAGCTGGTGG...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGCCACCAGCTGCTGCCTaGGGGCGCTCTCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQPPAAA*GRSHSA
Trigger: TGCAGAGTGAGAGCGCCCGCAGGCAGCAGCTGGTGG...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGATGCGCATGGCCTCTaGAGACGGGGCCACCATGTA +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWDAHGL*RRGHHV
Trigger: TACATGGTGGCCCCGTCTGCAGAGGCCATGCGCATC...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAGATGCGCATGGCCTCTaGAGACGGGGCCACCATGTA +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGDAHGL*RRGHHV
Trigger: TACATGGTGGCCCCGTCTGCAGAGGCCATGCGCATC...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGGATGTAGCAGTGTTCTaGAGCCAGGCCTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQDVAVF*SQAWTL
Trigger: CAGGGTCCAGGCCTGGCTCCAGAACACTGCTACATC...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGACTCACCAGGGAACTGTaGCTGGCACAGGCTGACGGT +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGLTREL*LAQADG
Trigger: ACCGTCAGCCTGTGCCAGCCACAGTTCCCTGGTGAG...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGGCGGGCAGGCACCAATaGGGGCACAGAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQAGRHQ*GHRGSW
Trigger: CCAGGACCCTCTGTGCCCCCATTGGTGCCTGCCCGC...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGAGCGGGAACCACTTaGGCGAGACTGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWGAGTT*ARLWRL
Trigger: CAACCTCCACAGTCTCGCCCAAGTGGTTCCCGCTCC...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGGGCTGCCAGGAATACTaGCGGGTTGGCTGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQGCQEY*RVGCGH
Trigger: GTGCCCGCAGCCAACCCGCCAGTATTCCTGGCAGCC...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGTACCCGCTCTGTGCCTaGGGGCTCACGGAAAGGACT +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWYPLCA*GLTERT
Trigger: AGTCCTTTCCGTGAGCCCCCAGGCACAGAGCGGGTA...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGTCCTCTCCCTTGGAATaGGTACCCGCAAGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQSSPLE*VPASPH
Trigger: GTGGGGACTTGCGGGTACCCATTCCAAGGGAGAGGA...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGTCCCGGAGCCGCTCTTaGCGCTGCCGACGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQSRSRS*RCRRWY
Trigger: GTACCACCGTCGGCAGCGCCAAGAGCGGCTCCGGGA...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCCACACAGGTTCAGGATaGTCTCCAGGCGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFHTGSG*SPGAGV
Trigger: AACGCCAGCGCCTGGAGACCATCCTGAACCTGTGTG...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGTGGCCTCTCCAATACTaGGCAGCTCCCCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGWPLQY*AAPQSQ
Trigger: CTGAGACTGGGGAGCTGCCCAGTATTGGAGAGGCCA...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCTCTTCATGCTCCTGCTaGGTGCTCTCGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFSSCSC*VLSVLL
Trigger: CAGCAGCACCGAGAGCACCCAGCAGGAGCATGAAGA...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGTCTTCATGCTCCTGCTaGGTGCTCTCGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQSSCSC*VLSVLL
Trigger: CAGCAGCACCGAGAGCACCCAGCAGGAGCATGAAGA...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGGACTCCTGTACTGCCTaGGCCCGGATCTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQDSCTA*ARICPA
Trigger: GGCTGGGCAGATCCGGGCCCAGGCAGTACAGGAGTC...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGTGCGAGGAAGGCTACTaGTGCCATTCTGGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGCEEGY*CHSGRA
Trigger: TGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCA...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCTGCTGTAGGGCCAGCTaGCGCTTGGTCTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFCCRAS*RLVSMS
Trigger: GGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCA...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGTGGCTGCAGAACCAATaGCTGTCCTCCCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGWLQNQ*LSSLPP
Trigger: TGGAGGAAGGGAGGACAGTCATTGGTTCTGCAGCCA...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGCACAACATGCAGCCCTaGGTGAGCCGGGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQHNMQP*VSRVGC
Trigger: GCAGCCCACCCGGCTCACTCAGGGCTGCATGTTGTG...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCCTGTGTGGTTCCCATTaGCCAGGCTCTCCGATTCAG +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFLCGSH*PGSPIQ
Trigger: CTGAATCGGAGAGCCTGGTCAATGGGAACCACACAG...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGGGAGAAGTCCTCAGGTaGAGTCCCGTGGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQGEVLR*SPVGCP
Trigger: TGGGCAGCCCACGGGACTTCACCTGAGGACTTCTCC...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGGGCTCAGCCTGCCACTaGAGCTACCCTTGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTEGSACH*SYPCEV
Trigger: CACCTCGCAAGGGTAGCTTCAGTGGCAGGCTGAGCC...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCTCTTGCCACCCATCTTaGTCAGGTAGCCACGGCACA +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFSCHPS*SGSHGT
Trigger: TGTGCCGTGGCTACCTGATCAAGATGGGTGGCAAGA...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCCCGGGTTGCAGGTTGTaGTGTGTGGTTCCCATTGAC +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFPGCRL*CVVPID
Trigger: GTCAATGGGAACCACACAGCACAACCTGCAACCCGG...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR GCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGAGCCTCTCCATCTCCTaGTCCCGGAGCCGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTESLSIS*SRSRSW
Trigger: CCAAGAGCGGCTCCGGGAGCAGGAGATGGAGAGGCT...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGACATGCTCCTGCTGGGTaGTCTCGGTGCTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGHAPAG*SRCCCI
Trigger: AATGCAGCAGCACCGAGAGCACCCAGCAGGAGCATG...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGCATGCTCCTGCTGGGTaGTCTCGGTGCTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWHAPAG*SRCCCI
Trigger: AATGCAGCAGCACCGAGAGCACCCAGCAGGAGCATG...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGCTGCCTCCTGCAGCTaGTGTTCCAGCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWAASCS*CSSSFT
Trigger: AGTGAAGGAGCTGGAACAGCAGCTGCAGGAGGCAGC...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGTCTCGGGCTGCCTCCTaGAGCTGCTGTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQSRAAS*SCCSSS
Trigger: GGAGCTGGAACAGCAGCTGCAGGAGGCAGCCCGAGA...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCTCGGGCTGCCTCCTaGAGCTGCTGTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTESRAAS*SCCSSS
Trigger: GGAGCTGGAACAGCAGCTGCAGGAGGCAGCCCGAGA...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGCTCCCCCTGCAGCAGTaGTCTCTCCATCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTELPLQQ*SLHLGL
Trigger: GAGGCCGAGATGGAGAGAGCACTGCTGCAGGGGGAG...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGACCCTGTCCTTCTGGATaGCTGTCTCCAAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGPCPSG*LSPRPP
Trigger: TGGTGGCCTTGGAGACAGGCATCCAGAAGGACAGGG...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCATTCGGACTCTTGGCTaGGCTGCGCAGGTGGTCATA +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFIRTLG*AAQVVI
Trigger: TATGACCACCTGCGCAGCGCAGCCAAGAGTCCGAAT...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000144251.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGCATCCAGGGCCTAGCTaGCTCCTATTGAGAGGATCC +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGHPGPS*LLLRGS
Trigger: GGATCCTCTCAATAGGAGCCAGCTAGGCCCTGGATG...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAGATGTAGCAGTGTTCTaGAGCCAGGCCTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGDVAVF*SQAWTL
Trigger: CAGGGTCCAGGCCTGGCTCCAGAACACTGCTACATC...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAGCGACAATGGGGATGTaGCAGCAGGCTTCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGATMGM*QQASCL
Trigger: CAGGCAAGAAGCCTGCTGCCACATCCCCATTGTCGC...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGTGGAGCCCACAGACATaGCACCGGGGCTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQWSPQT*HRGWLE
Trigger: CTCCAACCAGCCCCGGTGCCATGTCTGTGGGCTCCA...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGCACAGCTTCCGCTGCTaGCTGGTGAGGAAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWHSFRC*LVRKVE
Trigger: CTCCACTTTCCTCACCAGCCAGCAGCGGAAGCTGTG...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCTGCCCACTTGGTGAATaGCTAGCACAGCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFCPLGE*LAQLPL
Trigger: CAGCGGAAGCTGTGCTAGCCATTCACCAAGTGGGCA...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGGCGGGCAGGCACCAATaGGGGCACAGAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKAGRHQ*GHRGSW
Trigger: CCAGGACCCTCTGTGCCCCCATTGGTGCCTGCCCGC...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCGCGGGCACCGGAAGATaGGTATTCACTCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFAGTGR*VFTQAD
Trigger: ATCAGCCTGAGTGAATACCCATCTTCCGGTGCCCGC...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGCTGGGAGGGCGGTCCTaGAGTGTGCCGATCTTGTTT +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWLGGRS*SVPILF
Trigger: AAACAAGATCGGCACACTCCAGGACCGCCCTCCCAG...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGAGTCCGGGCTGGCAGTaGGGACAGAGCCCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQSPGWQ*GQSPSR
Trigger: TCTCGAAGGGCTCTGTCCCCACTGCCAGCCCGGACT...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCTCCCGGAGCCGCTCTTaGCGCTGCCGACGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLSRSRS*RCRRWY
Trigger: GTACCACCGTCGGCAGCGCCAAGAGCGGCTCCGGGA...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGACACACAGGTTCAGGATaGTCTCCAGGCGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGHTGSG*SPGAGV
Trigger: AACGCCAGCGCCTGGAGACCATCCTGAACCTGTGTG...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGATCTTCATGCTCCTGCTaGGTGCTCTCGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGSSCSC*VLSVLL
Trigger: CAGCAGCACCGAGAGCACCCAGCAGGAGCATGAAGA...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGAACTTCTCCTGCAGCTaGTCCACCGCCCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQNFSCS*STALCS
Trigger: GGAACAAAGGGCGGTGGACCAGCTGCAGGAGAAGTT...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGTTGTCCCTGTCCTTCTaGATGCCTGTCTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQLSLSF*MPVSKA
Trigger: GGCCTTGGAGACAGGCATCCAGAAGGACAGGGACAA...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGTGCGAGGAAGGCTACTaGTGCCATTCTGGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWCEEGY*CHSGRA
Trigger: TGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCA...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGCAATGTCCTGCAGTGTaGCTGCCAGGTTGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQQCPAV*LPGCEE
Trigger: TTCCTCGCAACCTGGCAGCCACACTGCAGGACATTG...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCCAATGTCCTGCAGTGTaGCTGCCAGGTTGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFQCPAV*LPGCEE
Trigger: TTCCTCGCAACCTGGCAGCCACACTGCAGGACATTG...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGCCATGTCCAGACCACTaGCGCTGGACATGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWPCPDH*RWTCCP
Trigger: CGGACAACATGTCCAGCGCCAGTGGTCTGGACATGG...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGCCATCCAGATGCGCATaGCCTCTGCAGACGGGGCCA +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTEPSRCA*PLQTGP
Trigger: TGGCCCCGTCTGCAGAGGCCATGCGCATCTGGATGG...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGATGGGAGCCAAGTCCTaGGAGGCAGAAGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWMGAKS*EAEAQE
Trigger: TTCCTGGGCTTCTGCCTCCCAGGACTTGGCTCCCAT...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000135436.8
ENSMUST00000138356.8
CDS-3UTR TCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGCCCAGGCTCACCAGATaGGGTTTGTCCGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTEPRLTR*GLSVCT
Trigger: GGTGCAGACGGACAAACCTCATCTGGTGAGCCTGGG...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGCCCAGGCTCACCAGATaGGGTTTGTCCGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQPRLTR*GLSVCT
Trigger: GGTGCAGACGGACAAACCTCATCTGGTGAGCCTGGG...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCACATGCAGCCCTGAGTaGGCCGGGTGGGCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLTCSPE*AGWAAE
Trigger: TTCGGCAGCCCACCCGGCTCACTCAGGGCTGCATGT...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGACTGTGTGGTTCCCATTaGCCAGGCTCTCCGATTCAG +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGLCGSH*PGSPIQ
Trigger: CTGAATCGGAGAGCCTGGTCAATGGGAACCACACAG...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGGGGGCTCTGACGAGGTaGAGCCCCAGTAAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQGALTR*SPSKRA
Trigger: GGCTCTCTTACTGGGGCTTCACCTCGTCAGAGCCCC...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGGGATGGAATGATGCATaGGTGCAGGGAAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGGWNDA*VQGSLK
Trigger: CTTCAGGCTTCCCTGCACTCATGCATCATTCCATCC...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGGCTTTTCCCGGAGCTTaGCTTCTTTCTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGAFPGA*LLSPPA
Trigger: AGCTGGTGGAGAAAGAAGTCAAGCTCCGGGAAAAGC...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGATCTTGCCACCCATCTTaGTCAGGTAGCCACGGCACA +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGSCHPS*SGSHGT
Trigger: TGTGCCGTGGCTACCTGATCAAGATGGGTGGCAAGA...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGTGGCCTGGAAATAGATaGCCCCCTTCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGWPGNR*PPSASS
Trigger: AGACGAAGCTGAAGGGGGTCATCTATTTCCAGGCCA...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGTGGCCTGGAAATAGATaGCCCCCTTCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQWPGNR*PPSASS
Trigger: AGACGAAGCTGAAGGGGGTCATCTATTTCCAGGCCA...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAGCCTCTCCATCTCCTaGTCCCGGAGCCGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQSLSIS*SRSRSW
Trigger: CCAAGAGCGGCTCCGGGAGCAGGAGATGGAGAGGCT...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGCATCAGAGCGCTCCATaGTCTCCCACAGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQHQSAP*SPTGAG
Trigger: CCCAGCGCCTGTGGGAGAGCATGGAGCGCTCTGATG...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGGCCTCCCGCTCCCCCTaGAGCAGTGCTCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKASRSP*SSALSI
Trigger: GATGGAGAGAGCACTGCTGCAGGGGGAGCGGGAGGC...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCAGCGAGGCTCGCTCTaGCTCCCGCTCCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFQRGSL*LPLPLQ
Trigger: CTGCAGGGGGAGCGGGAGGCAGAGCGAGCCTCGCTG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGGTGTGGCTGCCAGGTTaGGAGGAAGGCTACTGGTGC +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTEVWLPG*EEGYWC
Trigger: GCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACAC...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGGTGTGGCTGCCAGGTTaGGAGGAAGGCTACTGGTGC +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQVWLPG*EEGYWC
Trigger: GCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACAC...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGGTCCTGCAGTGTGGCTaGCAGGTTGCGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQVLQCG*QVARKA
Trigger: AGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGAC...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGTTGGTCTCAATGTCCTaGAGTGTGGCTGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGLVSMS*SVAARL
Trigger: CAACCTGGCAGCCACACTGCAGGACATTGAGACCAA...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCCCATTTCCTCGATCTTaGCCATGTCCAGACCACTGG +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFPFPRS*PCPDHW
Trigger: CCAGTGGTCTGGACATGGGCAAGATCGAGGAAATGG...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCCCACCAGCTGCTGCCTaGGGGCGCTCTCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLPPAAA*GRSHSA
Trigger: TGCAGAGTGAGAGCGCCCGCAGGCAGCAGCTGGTGG...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAATTCGGACTCTTGGCTaGGCTGCGCAGGTGGTCATA +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGIRTLG*AAQVVI
Trigger: TATGACCACCTGCGCAGCGCAGCCAAGAGTCCGAAT...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000144251.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGGATGCGCATGGCCTCTaGAGACGGGGCCACCATGTA +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTEDAHGL*RRGHHV
Trigger: TACATGGTGGCCCCGTCTGCAGAGGCCATGCGCATC...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGCCAGGGAACTGTGGCTaGCACAGGCTGACGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKPGNCG*HRLTVP
Trigger: GGGCACCGTCAGCCTGTGCCAGCCACAGTTCCCTGG...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGCCCGCCGTTAGCCATTaGCGACAATGGGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTEPAVSH*RQWGCG
Trigger: GCCACATCCCCATTGTCGCCAATGGCTAACGGCGGG...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCACTTGGGCGAGACTGTaGAGGTTGCAGAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFTWARL*RLQSQM
Trigger: CATTTGGCTCTGCAACCTCCACAGTCTCGCCCAAGT...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCCCCGGAGACCAGGGCTaGGAGGTCTCTCATGACCCC +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLPGDQG*EVSHDP
Trigger: GGGGTCATGAGAGACCTCCCAGCCCTGGTCTCCGGG...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGGCCGGGGACTCTCAGTaGTTCTGCGGGCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKAGDSQ*FCGPQP
Trigger: TGGCTGAGGCCCGCAGAACCACTGAGAGTCCCCGGC...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGCGGGCACCGGAAGATaGGTATTCACTCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWAGTGR*VFTQAD
Trigger: ATCAGCCTGAGTGAATACCCATCTTCCGGTGCCCGC...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAGCGGGCACCGGAAGATaGGTATTCACTCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGAGTGR*VFTQAD
Trigger: ATCAGCCTGAGTGAATACCCATCTTCCGGTGCCCGC...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGTACCCGCTCTGTGCCTaGGGGCTCACGGAAAGGACT +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQYPLCA*GLTERT
Trigger: AGTCCTTTCCGTGAGCCCCCAGGCACAGAGCGGGTA...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGTCAGGTGAAGTCCCGTaGGCTGCCCAGCGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGSGEVP*AAQRRG
Trigger: GCCCCGGCGCTGGGCAGCCCACGGGACTTCACCTGA...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGTTGTCCCTGTCCTTCTaGATGCCTGTCTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWLSLSF*MPVSKA
Trigger: GGCCTTGGAGACAGGCATCCAGAAGGACAGGGACAA...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGATTGTCCCTGTCCTTCTaGATGCCTGTCTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGLSLSF*MPVSKA
Trigger: GGCCTTGGAGACAGGCATCCAGAAGGACAGGGACAA...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGGACTCCTGTACTGCCTaGGCCCGGATCTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKDSCTA*ARICPA
Trigger: GGCTGGGCAGATCCGGGCCCAGGCAGTACAGGAGTC...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGGCTGACGGGAAGCTTTaGCAGGCAAAGGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQADGKL*QAKAGE
Trigger: CTCCCCCGCCTTTGCCTGCCAAAGCTTCCCGTCAGC...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAGGCCGCTACGGGTCCTaGGCAGGGGGCTGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGGRYGS*AGGWPH
Trigger: ATGCGGCCAGCCCCCTGCCCAGGACCCGTAGCGGCC...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGGCCGCTACGGGTCCTaGGCAGGGGGCTGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGGRYGS*AGGWPH
Trigger: ATGCGGCCAGCCCCCTGCCCAGGACCCGTAGCGGCC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGGGGCCAGCTGGCGCTTaGTCTCAATGTCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQGPAGA*SQCPAV
Trigger: CACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCC...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGCCATCCAGATGCGCATaGCCTCTGCAGACGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQPSRCA*PLQTGP
Trigger: TGGCCCCGTCTGCAGAGGCCATGCGCATCTGGATGG...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCTGCTGGGTCTTCAGGTaGGAGGGGCTCGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLCWVFR*EGLGRR
Trigger: CCTCCTGCCGAGCCCCTCCCACCTGAAGACCCAGCA...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000128326.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGTGGCTGGCACAGGCTaGCGGTGCCCGGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGVAGTG*RCPGCR
Trigger: CCTGCAACCCGGGCACCGTCAGCCTGTGCCAGCCAC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGGGCTCAGCCTGCCACTaGAGCTACCCTTGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKGSACH*SYPCEV
Trigger: CACCTCGCAAGGGTAGCTTCAGTGGCAGGCTGAGCC...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCGGCTCAGCCTGCCACTaGAGCTACCCTTGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLGSACH*SYPCEV
Trigger: CACCTCGCAAGGGTAGCTTCAGTGGCAGGCTGAGCC...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGGGGGCTCTGACGAGGTaGAGCCCCAGTAAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKGALTR*SPSKRA
Trigger: GGCTCTCTTACTGGGGCTTCACCTCGTCAGAGCCCC...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCCGGGCCAGACGCTCTaGCTCCTGTACTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGPGQTL*LLYCLG
Trigger: GCCCAGGCAGTACAGGAGTCAGAGCGTCTGGCCCGG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCCGGGCCAGACGCTCTaGCTCCTGTACTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFPGQTL*LLYCLG
Trigger: GCCCAGGCAGTACAGGAGTCAGAGCGTCTGGCCCGG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCGCATCCCACTGGCACTaGGCCTCTGCCGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFASHWH*ASAAAF
Trigger: GAAGGCGGCGGCAGAGGCTCAGTGCCAGTGGGATGC...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGCGGCTCTTCTCTGCGTaGGCTTCCTTTAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWRLFSA*ASFSIF
Trigger: GAAGATGCTAAAGGAAGCTCACGCAGAGAAGAGCCG...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGCTTTTCCCGGAGCTTaGCTTCTTTCTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWAFPGA*LLSPPA
Trigger: AGCTGGTGGAGAAAGAAGTCAAGCTCCGGGAAAAGC...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAGCTTTTCCCGGAGCTTaGCTTCTTTCTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGAFPGA*LLSPPA
Trigger: AGCTGGTGGAGAAAGAAGTCAAGCTCCGGGAAAAGC...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGTGGCCTGGAAATAGATaGCCCCCTTCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWWPGNR*PPSASS
Trigger: AGACGAAGCTGAAGGGGGTCATCTATTTCCAGGCCA...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGGCCAGGCCTGGACCCTaGAGTGAGATGTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKARPGP*SEMSLA
Trigger: AGCCAGGGACATCTCACTGCAGGGTCCAGGCCTGGC...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR GCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGGAGGGTCCTGGCTCCTaGCCACTTGGTGAATGGCTA +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQEGPGS*PLGEWL
Trigger: TAGCCATTCACCAAGTGGGCAGGAGCCAGGACCCTC...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGGCCACCACAGGTAACTaGCCACCTAGCCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKATTGN*PPSRGL
Trigger: GAGTCCCCGGCTAGGTGGGCAGTTACCTGTGGTGGC...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCGCCACCACAGGTAACTaGCCACCTAGCCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLATTGN*PPSRGL
Trigger: GAGTCCCCGGCTAGGTGGGCAGTTACCTGTGGTGGC...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGTTAGTACCCGCTCTGTaGCTGGGGGCTCACGGAAAG +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQLVPAL*LGAHGK
Trigger: CTTTCCGTGAGCCCCCAGGCACAGAGCGGGTACTAA...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTTAGTACCCGCTCTGTaGCTGGGGGCTCACGGAAAG +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTELVPAL*LGAHGK
Trigger: CTTTCCGTGAGCCCCCAGGCACAGAGCGGGTACTAA...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCTCGGCCACTTCCCTaGTTAGCTTGGGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTESRPLP*LAWDLG
Trigger: CCCCAGATCCCAAGCTAAGCAGGGAAGTGGCCGAGA...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCAGCCTCTCCATCTCCTaGTCCCGGAGCCGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLSLSIS*SRSRSW
Trigger: CCAAGAGCGGCTCCGGGAGCAGGAGATGGAGAGGCT...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCTCTCGGGCTGCCTCCTaGAGCTGCTGTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLSRAAS*SCCSSS
Trigger: GGAGCTGGAACAGCAGCTGCAGGAGGCAGCCCGAGA...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCCTCCCCCTGCAGCAGTaGTCTCTCCATCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLLPLQQ*SLHLGL
Trigger: GAGGCCGAGATGGAGAGAGCACTGCTGCAGGGGGAG...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGCAGCGAGGCTCGCTCTaGCTCCCGCTCCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQQRGSL*LPLPLQ
Trigger: CTGCAGGGGGAGCGGGAGGCAGAGCGAGCCTCGCTG...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGTTCTCCTTCTCCTTTTaGAGTAGCTGCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGFSFSF*SSCRAA
Trigger: TGCTGCCCTGCAGCTACTGCAAAAGGAGAAGGAGAA...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCTTCTCCTTCTCCTTTTaGAGTAGCTGCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFFSFSF*SSCRAA
Trigger: TGCTGCCCTGCAGCTACTGCAAAAGGAGAAGGAGAA...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGAACTCCTGGTACCACTaGTCTAAGTCTACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQNSWYH*SKSTAG
Trigger: CCCTGCTGTAGACTTAGAGCAGTGGTACCAGGAGTT...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGTTGGTCTCAATGTCCTaGAGTGTGGCTGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWLVSMS*SVAARL
Trigger: CAACCTGGCAGCCACACTGCAGGACATTGAGACCAA...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGATTGGTCTCAATGTCCTaGAGTGTGGCTGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGLVSMS*SVAARL
Trigger: CAACCTGGCAGCCACACTGCAGGACATTGAGACCAA...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAAGATGCTGGTCTCCATaGTGTCTGAACTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGRCWSP*CLNSPG
Trigger: GCCTGGAGAGTTCAGACAGCATGGAGACCAGCATCT...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGTCTTTCTCCACCAGCTaGTGCCTGCGGGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQSFSTS*CLRALS
Trigger: TGAGAGCGCCCGCAGGCAGCAGCTGGTGGAGAAAGA...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGACGTGTAAGAGGCCGTaGCTGGGAGAACTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWTCKRP*LGELLF
Trigger: GAAAAGCAGTTCTCCCAGGCACGGCCTCTTACACGT...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACGTGTAAGAGGCCGTaGCTGGGAGAACTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGTCKRP*LGELLF
Trigger: GAAAAGCAGTTCTCCCAGGCACGGCCTCTTACACGT...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCCCGGACCCCTGCTaGAATCATACTTTTCATCCA +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWGPDPC*NHTFHP
Trigger: TGGATGAAAAGTATGATTCCAGCAGGGGTCCGGGCC...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAGTTGTAGGTGGGCCCTaGGGCCCGGACCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGVVGGP*GPDPCW
Trigger: CCAGCAGGGGTCCGGGCCCCAGGGCCCACCTACAAC...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGACTTGGGCGAGACTGTaGAGGTTGCAGAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWTWARL*RLQSQM
Trigger: CATTTGGCTCTGCAACCTCCACAGTCTCGCCCAAGT...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACTTGGGCGAGACTGTaGAGGTTGCAGAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGTWARL*RLQSQM
Trigger: CATTTGGCTCTGCAACCTCCACAGTCTCGCCCAAGT...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGTCGGGGAGCAGGCACTaGAGACTGGAACTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQSGSRH*RLELGA
Trigger: AGCCCCAAGTTCCAGTCTCCAGTGCCTGCTCCCCGA...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGGCTCACGGAAAGGACTaGGAGGGCGGTCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKAHGKD*EGGPGV
Trigger: CACTCCAGGACCGCCCTCCCAGTCCTTTCCGTGAGC...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGAGTCCGGGCTGGCAGTaGGGACAGAGCCCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKSPGWQ*GQSPSR
Trigger: TCTCGAAGGGCTCTGTCCCCACTGCCAGCCCGGACT...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGTCAGGTGAAGTCCCGTaGGCTGCCCAGCGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQSGEVP*AAQRRG
Trigger: GCCCCGGCGCTGGGCAGCCCACGGGACTTCACCTGA...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGCCCGCAAGTCCCCACTaGAGAGCTTCCGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKPASPH*RASAEH
Trigger: GTGCTCAGCGGAAGCTCTCCAGTGGGGACTTGCGGG...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGTCCTCTCCCTTGGAATaGGTACCCGCAAGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQSSPLE*VPASPH
Trigger: GTGGGGACTTGCGGGTACCCATTCCAAGGGAGAGGA...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGCACACAGGTTCAGGATaGTCTCCAGGCGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTEHTGSG*SPGAGV
Trigger: AACGCCAGCGCCTGGAGACCATCCTGAACCTGTGTG...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGTCTTCATGCTCCTGCTaGGTGCTCTCGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQSSCSC*VLSVLL
Trigger: CAGCAGCACCGAGAGCACCCAGCAGGAGCATGAAGA...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCCCGGACATCAACTCCTaGTACCACTGCTCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFPDINS*YHCSKS
Trigger: AGACTTAGAGCAGTGGTACCAGGAGTTGATGTCCGG...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGGCCGCTACGGGTCCTaGGCAGGGGGCTGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAGRYGS*AGGWPH
Trigger: ATGCGGCCAGCCCCCTGCCCAGGACCCGTAGCGGCC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTGCGAGGAAGGCTACTaGTGCCATTCTGGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTECEEGY*CHSGRA
Trigger: TGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCA...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGGGGCCAGCTGGCGCTTaGTCTCAATGTCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQGPAGA*SQCPAV
Trigger: CACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCC...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGTGCTGTAGGGCCAGCTaGCGCTTGGTCTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQCCRAS*RLVSMS
Trigger: GGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCA...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGCCATCCAGATGCGCATaGCCTCTGCAGACGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKPSRCA*PLQTGP
Trigger: TGGCCCCGTCTGCAGAGGCCATGCGCATCTGGATGG...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGCACAAGGGTACAGGGTaGGAGTGCCCCGCAGATTCT +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQHKGTG*ECPADS
Trigger: AGAATCTGCGGGGCACTCTCACCCTGTACCCTTGTG...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCACAACATGCAGCCCTaGGTGAGCCGGGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGHNMQP*VSRVGC
Trigger: GCAGCCCACCCGGCTCACTCAGGGCTGCATGTTGTG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGCGCAGGAAGGTGGATTaGCCCAGACACAACATGCAG +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTERRKVD*PRHNMQ
Trigger: CTGCATGTTGTGTCTGGGTCAATCCACCTTCCTGCG...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCCGGATCTGCCCAGCCTaGCTGTCCAGTACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLRICPA*LSSTAR
Trigger: CCTAGCTGTACTGGACAGTCAGGCTGGGCAGATCCG...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGCGGATCTGCCCAGCCTaGCTGTCCAGTACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKRICPA*LSSTAR
Trigger: CCTAGCTGTACTGGACAGTCAGGCTGGGCAGATCCG...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCTTGCCACCCATCTTaGTCAGGTAGCCACGGCACA +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTESCHPS*SGSHGT
Trigger: TGTGCCGTGGCTACCTGATCAAGATGGGTGGCAAGA...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGACTGGAACTTGGGGCTaGCAGGAATACTGGCGGGTT +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQTGTWG*QEYWRV
Trigger: AACCCGCCAGTATTCCTGGCAGCCCCAAGTTCCAGT...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGACTGGAACTTGGGGCTaGCAGGAATACTGGCGGGTT +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTETGTWG*QEYWRV
Trigger: AACCCGCCAGTATTCCTGGCAGCCCCAAGTTCCAGT...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCGGCGGTCCTGGAGTGTaGCGATCTTGTTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLGGPGV*RSCFGE
Trigger: CTCCCCGAAACAAGATCGGCACACTCCAGGACCGCC...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGCCAGGAGCGTCTTCATaGTCCTGCTGGGTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKPGASS*SCWVLS
Trigger: CGAGAGCACCCAGCAGGAGCATGAAGACGCTCCTGG...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGGCTGCCTCCTGCAGCTaGTGTTCCAGCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQAASCS*CSSSFT
Trigger: AGTGAAGGAGCTGGAACAGCAGCTGCAGGAGGCAGC...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCGCCTCCCGCTCCCCCTaGAGCAGTGCTCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFASRSP*SSALSI
Trigger: GATGGAGAGAGCACTGCTGCAGGGGGAGCGGGAGGC...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTCAGCGAGGCTCGCTCTaGCTCCCGCTCCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAQRGSL*LPLPLQ
Trigger: CTGCAGGGGGAGCGGGAGGCAGAGCGAGCCTCGCTG...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGTTCTCCTTCTCCTTTTaGAGTAGCTGCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWFSFSF*SSCRAA
Trigger: TGCTGCCCTGCAGCTACTGCAAAAGGAGAAGGAGAA...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCGTCCTGCAGTGTGGCTaGCAGGTTGCGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLVLQCG*QVARKA
Trigger: AGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGAC...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGGTCCTGCAGTGTGGCTaGCAGGTTGCGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKVLQCG*QVARKA
Trigger: AGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGAC...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGACTTGGTGTCCCTTTTaGTGTAGGGCCAGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQTWCPF*CRASWR
Trigger: GCGCCAGCTGGCCCTACAGCAAAAGGGACACCAAGT...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCCACCAGCTGCTGCCTaGGGGCGCTCTCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGPPAAA*GRSHSA
Trigger: TGCAGAGTGAGAGCGCCCGCAGGCAGCAGCTGGTGG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGCGTAATAGGAAAGGGTaGGCTTCAGCCGATCAAAGA +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGRNRKG*ASADQR
Trigger: TCTTTGATCGGCTGAAGCGCACCCTTTCCTATTACG...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCCGTAATAGGAAAGGGTaGGCTTCAGCCGATCAAAGA +
Preference number: 4 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFRNRKG*ASADQR
Trigger: TCTTTGATCGGCTGAAGCGCACCCTTTCCTATTACG...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGATTCGGACTCTTGGCTaGGCTGCGCAGGTGGTCATA +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQIRTLG*AAQVVI
Trigger: TATGACCACCTGCGCAGCGCAGCCAAGAGTCCGAAT...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000144251.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGTTGTAGGTGGGCCCTaGGGCCCGGACCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAVVGGP*GPDPCW
Trigger: CCAGCAGGGGTCCGGGCCCCAGGGCCCACCTACAAC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCCCCGCCGTTAGCCATTaGCGACAATGGGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLPAVSH*RQWGCG
Trigger: GCCACATCCCCATTGTCGCCAATGGCTAACGGCGGG...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCCCGGAGACCAGGGCTaGGAGGTCTCTCATGACCCC +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFPGDQG*EVSHDP
Trigger: GGGGTCATGAGAGACCTCCCAGCCCTGGTCTCCGGG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCGCCGGGGACTCTCAGTaGTTCTGCGGGCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFAGDSQ*FCGPQP
Trigger: TGGCTGAGGCCCGCAGAACCACTGAGAGTCCCCGGC...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGGCCGGGGACTCTCAGTaGTTCTGCGGGCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGAGDSQ*FCGPQP
Trigger: TGGCTGAGGCCCGCAGAACCACTGAGAGTCCCCGGC...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCTCGGGGAGCAGGCACTaGAGACTGGAACTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLSGSRH*RLELGA
Trigger: AGCCCCAAGTTCCAGTCTCCAGTGCCTGCTCCCCGA...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGCCTTCGAGACAGAGATaGACTCAACGGGGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQPSRQR*TQRGQF
Trigger: GAACTGCCCCCGTTGAGTCCATCTCTGTCTCGAAGG...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGTCCTCTCCCTTGGAATaGGTACCCGCAAGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQSSPLE*VPASPH
Trigger: GTGGGGACTTGCGGGTACCCATTCCAAGGGAGAGGA...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGTGGCCTCTCCAATACTaGGCAGCTCCCCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQWPLQY*AAPQSQ
Trigger: CTGAGACTGGGGAGCTGCCCAGTATTGGAGAGGCCA...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGTCTTCATGCTCCTGCTaGGTGCTCTCGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQSSCSC*VLSVLL
Trigger: CAGCAGCACCGAGAGCACCCAGCAGGAGCATGAAGA...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGAACTTCTCCTGCAGCTaGTCCACCGCCCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQNFSCS*STALCS
Trigger: GGAACAAAGGGCGGTGGACCAGCTGCAGGAGAAGTT...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATGGCCGCTACGGGTCCTaGGCAGGGGGCTGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDGRYGS*AGGWPH
Trigger: ATGCGGCCAGCCCCCTGCCCAGGACCCGTAGCGGCC...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGCAATGTCCTGCAGTGTaGCTGCCAGGTTGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQQCPAV*LPGCEE
Trigger: TTCCTCGCAACCTGGCAGCCACACTGCAGGACATTG...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGCAATGTCCTGCAGTGTaGCTGCCAGGTTGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTEQCPAV*LPGCEE
Trigger: TTCCTCGCAACCTGGCAGCCACACTGCAGGACATTG...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGGGGCCAGCTGGCGCTTaGTCTCAATGTCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKGPAGA*SQCPAV
Trigger: CACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCC...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGCCATGTCCAGACCACTaGCGCTGGACATGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQPCPDH*RWTCCP
Trigger: CGGACAACATGTCCAGCGCCAGTGGTCTGGACATGG...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGCTGGGTCTTCAGGTaGGAGGGGCTCGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFCWVFR*EGLGRR
Trigger: CCTCCTGCCGAGCCCCTCCCACCTGAAGACCCAGCA...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000128326.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGACACAACATGCAGCCCTaGGTGAGCCGGGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGHNMQP*VSRVGC
Trigger: GCAGCCCACCCGGCTCACTCAGGGCTGCATGTTGTG...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGGCACCAATGAATCCATaGTTTCCTGCAGGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: GTSRVAGGRARSPGAELGAPMNP*FPAGPF
Trigger: AAAAGGACCTGCAGGAAATCATGGATTCATTGGTGC...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGGGGGCTCTGACGAGGTaGAGCCCCAGTAAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGGALTR*SPSKRA
Trigger: GGCTCTCTTACTGGGGCTTCACCTCGTCAGAGCCCC...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGTGCTGCATTCCTCTTTaGGATTCTCTTCATCAGAGC +
Preference number: 4 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQCCIPL*DSLHQS
Trigger: GCTCTGATGAAGAGAATCTCAAAGAGGAATGCAGCA...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGGGATGGAATGATGCATaGGTGCAGGGAAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTEGWNDA*VQGSLK
Trigger: CTTCAGGCTTCCCTGCACTCATGCATCATTCCATCC...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGCGGCTCTTCTCTGCGTaGGCTTCCTTTAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQRLFSA*ASFSIF
Trigger: GAAGATGCTAAAGGAAGCTCACGCAGAGAAGAGCCG...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGTGGCCTGGAAATAGATaGCCCCCTTCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQWPGNR*PPSASS
Trigger: AGACGAAGCTGAAGGGGGTCATCTATTTCCAGGCCA...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGTGAGCCGGGTGGGCTaGCGAACAGGGAGCCCATCA +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGVSRVG*RTGSPS
Trigger: TGATGGGCTCCCTGTTCGGCAGCCCACCCGGCTCAC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR GCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCGAGGGTCCTGGCTCCTaGCCACTTGGTGAATGGCTA +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLEGPGS*PLGEWL
Trigger: TAGCCATTCACCAAGTGGGCAGGAGCCAGGACCCTC...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGGCCACCACAGGTAACTaGCCACCTAGCCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGATTGN*PPSRGL
Trigger: GAGTCCCCGGCTAGGTGGGCAGTTACCTGTGGTGGC...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGGCTACCCTTGCGAGGTaGCAGGGACTCCCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQATLAR*QGLPEG
Trigger: ACCCTCGGGGAGTCCCTGGCACCTCGCAAGGGTAGC...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCAGCCGCTCTTGGCGCTaGCGACGGTGGTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFSRSWR*RRWYSR
Trigger: TCTGGAGTACCACCGTCGGCAGCGCCAAGAGCGGCT...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGAGCCGCTCTTGGCGCTaGCGACGGTGGTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGSRSWR*RRWYSR
Trigger: TCTGGAGTACCACCGTCGGCAGCGCCAAGAGCGGCT...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCCATGCTCCTGCTGGGTaGTCTCGGTGCTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLHAPAG*SRCCCI
Trigger: AATGCAGCAGCACCGAGAGCACCCAGCAGGAGCATG...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGCATGCTCCTGCTGGGTaGTCTCGGTGCTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKHAPAG*SRCCCI
Trigger: AATGCAGCAGCACCGAGAGCACCCAGCAGGAGCATG...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTCTCGGGCTGCCTCCTaGAGCTGCTGTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFSRAAS*SCCSSS
Trigger: GGAGCTGGAACAGCAGCTGCAGGAGGCAGCCCGAGA...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAGCCTCCCGCTCCCCCTaGAGCAGTGCTCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGASRSP*SSALSI
Trigger: GATGGAGAGAGCACTGCTGCAGGGGGAGCGGGAGGC...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGCCTCCCGCTCCCCCTaGAGCAGTGCTCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGASRSP*SSALSI
Trigger: GATGGAGAGAGCACTGCTGCAGGGGGAGCGGGAGGC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGCCCTGTCCTTCTGGATaGCTGTCTCCAAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKPCPSG*LSPRPP
Trigger: TGGTGGCCTTGGAGACAGGCATCCAGAAGGACAGGG...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCCCCTGTCCTTCTGGATaGCTGTCTCCAAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLPCPSG*LSPRPP
Trigger: TGGTGGCCTTGGAGACAGGCATCCAGAAGGACAGGG...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGATCCTTTTGCAGTAGCTaGAGGGCAGCATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGSFCSS*RAAFFS
Trigger: GGAAAAGAATGCTGCCCTGCAGCTACTGCAAAAGGA...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGTTGGTCTCAATGTCCTaGAGTGTGGCTGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQLVSMS*SVAARL
Trigger: CAACCTGGCAGCCACACTGCAGGACATTGAGACCAA...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCTGGCACTGAGCCTCTaGCGCCGCCTTCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGLALSL*RRLLLQ
Trigger: CTGAAGCAGAAGGCGGCGGCAGAGGCTCAGTGCCAG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGCCATTTCCTCGATCTTaGCCATGTCCAGACCACTGG +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQPFPRS*PCPDHW
Trigger: CCAGTGGTCTGGACATGGGCAAGATCGAGGAAATGG...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGACGTGTAAGAGGCCGTaGCTGGGAGAACTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTETCKRP*LGELLF
Trigger: GAAAAGCAGTTCTCCCAGGCACGGCCTCTTACACGT...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGACGTGTAAGAGGCCGTaGCTGGGAGAACTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQTCKRP*LGELLF
Trigger: GAAAAGCAGTTCTCCCAGGCACGGCCTCTTACACGT...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGACGTAATAGGAAAGGGTaGGCTTCAGCCGATCAAAGA +
Preference number: 4 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGRNRKG*ASADQR
Trigger: TCTTTGATCGGCTGAAGCGCACCCTTTCCTATTACG...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGATTCGGACTCTTGGCTaGGCTGCGCAGGTGGTCATA +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQIRTLG*AAQVVI
Trigger: TATGACCACCTGCGCAGCGCAGCCAAGAGTCCGAAT...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000144251.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGACCAGGGAACTGTGGCTaGCACAGGCTGACGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGPGNCG*HRLTVP
Trigger: GGGCACCGTCAGCCTGTGCCAGCCACAGTTCCCTGG...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCGCGACAATGGGGATGTaGCAGCAGGCTTCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLATMGM*QQASCL
Trigger: CAGGCAAGAAGCCTGCTGCCACATCCCCATTGTCGC...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGCCCGGAGACCAGGGCTaGGAGGTCTCTCATGACCCC +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQPGDQG*EVSHDP
Trigger: GGGGTCATGAGAGACCTCCCAGCCCTGGTCTCCGGG...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCCCGCAAGTCCCCACTaGAGAGCTTCCGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGPASPH*RASAEH
Trigger: GTGCTCAGCGGAAGCTCTCCAGTGGGGACTTGCGGG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCCCGCAAGTCCCCACTaGAGAGCTTCCGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFPASPH*RASAEH
Trigger: GTGCTCAGCGGAAGCTCTCCAGTGGGGACTTGCGGG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCTCCTCTCCCTTGGAATaGGTACCCGCAAGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLSSPLE*VPASPH
Trigger: GTGGGGACTTGCGGGTACCCATTCCAAGGGAGAGGA...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGTGGCCTCTCCAATACTaGGCAGCTCCCCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKWPLQY*AAPQSQ
Trigger: CTGAGACTGGGGAGCTGCCCAGTATTGGAGAGGCCA...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGTCTTCATGCTCCTGCTaGGTGCTCTCGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKSSCSC*VLSVLL
Trigger: CAGCAGCACCGAGAGCACCCAGCAGGAGCATGAAGA...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAACTTCTCCTGCAGCTaGTCCACCGCCCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQNFSCS*STALCS
Trigger: GGAACAAAGGGCGGTGGACCAGCTGCAGGAGAAGTT...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGACTCCTGTACTGCCTaGGCCCGGATCTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGDSCTA*ARICPA
Trigger: GGCTGGGCAGATCCGGGCCCAGGCAGTACAGGAGTC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGGCTGACGGGAAGCTTTaGCAGGCAAAGGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGADGKL*QAKAGE
Trigger: CTCCCCCGCCTTTGCCTGCCAAAGCTTCCCGTCAGC...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGCAATGTCCTGCAGTGTaGCTGCCAGGTTGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQQCPAV*LPGCEE
Trigger: TTCCTCGCAACCTGGCAGCCACACTGCAGGACATTG...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGTGCTGTAGGGCCAGCTaGCGCTTGGTCTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKCCRAS*RLVSMS
Trigger: GGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCA...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCCCATGTCCAGACCACTaGCGCTGGACATGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLPCPDH*RWTCCP
Trigger: CGGACAACATGTCCAGCGCCAGTGGTCTGGACATGG...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGCCATGTCCAGACCACTaGCGCTGGACATGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKPCPDH*RWTCCP
Trigger: CGGACAACATGTCCAGCGCCAGTGGTCTGGACATGG...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCCATCCAGATGCGCATaGCCTCTGCAGACGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGPSRCA*PLQTGP
Trigger: TGGCCCCGTCTGCAGAGGCCATGCGCATCTGGATGG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCCCAGGCTCACCAGATaGGGTTTGTCCGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGPRLTR*GLSVCT
Trigger: GGTGCAGACGGACAAACCTCATCTGGTGAGCCTGGG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTACATGCAGCCCTGAGTaGGCCGGGTGGGCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASATCSPE*AGWAAE
Trigger: TTCGGCAGCCCACCCGGCTCACTCAGGGCTGCATGT...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAGTGGCTGGCACAGGCTaGCGGTGCCCGGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGVAGTG*RCPGCR
Trigger: CCTGCAACCCGGGCACCGTCAGCCTGTGCCAGCCAC...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGCACCAATGAATCCATaGTTTCCTGCAGGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWAPMNP*FPAGPF
Trigger: AAAAGGACCTGCAGGAAATCATGGATTCATTGGTGC...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGGGAGAAGTCCTCAGGTaGAGTCCCGTGGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQGEVLR*SPVGCP
Trigger: TGGGCAGCCCACGGGACTTCACCTGAGGACTTCTCC...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAGGCTCAGCCTGCCACTaGAGCTACCCTTGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGGSACH*SYPCEV
Trigger: CACCTCGCAAGGGTAGCTTCAGTGGCAGGCTGAGCC...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGGCTCAGCCTGCCACTaGAGCTACCCTTGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGGSACH*SYPCEV
Trigger: CACCTCGCAAGGGTAGCTTCAGTGGCAGGCTGAGCC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGATCCTGCCAAGCCTCTTaGGGGCCTCCTGCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGSCQAS*GPPACQ
Trigger: TTGGCAGGCAGGAGGCCCTCAAGAGGCTTGGCAGGA...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATGCATCCCACTGGCACTaGGCCTCTGCCGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHASHWH*ASAAAF
Trigger: GAAGGCGGCGGCAGAGGCTCAGTGCCAGTGGGATGC...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGGGATGGAATGATGCATaGGTGCAGGGAAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQGWNDA*VQGSLK
Trigger: CTTCAGGCTTCCCTGCACTCATGCATCATTCCATCC...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGTCTTGCCACCCATCTTaGTCAGGTAGCCACGGCACA +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKSCHPS*SGSHGT
Trigger: TGTGCCGTGGCTACCTGATCAAGATGGGTGGCAAGA...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCCCGGGTTGCAGGTTGTaGTGTGTGGTTCCCATTGAC +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLPGCRL*CVVPID
Trigger: GTCAATGGGAACCACACAGCACAACCTGCAACCCGG...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGGCCACCACAGGTAACTaGCCACCTAGCCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQATTGN*PPSRGL
Trigger: GAGTCCCCGGCTAGGTGGGCAGTTACCTGTGGTGGC...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGACTGGAACTTGGGGCTaGCAGGAATACTGGCGGGTT +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKTGTWG*QEYWRV
Trigger: AACCCGCCAGTATTCCTGGCAGCCCCAAGTTCCAGT...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAAGCCGCTCTTGGCGCTaGCGACGGTGGTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGSRSWR*RRWYSR
Trigger: TCTGGAGTACCACCGTCGGCAGCGCCAAGAGCGGCT...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGAGCCGCTCTTGGCGCTaGCGACGGTGGTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQSRSWR*RRWYSR
Trigger: TCTGGAGTACCACCGTCGGCAGCGCCAAGAGCGGCT...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAAGCCTCTCCATCTCCTaGTCCCGGAGCCGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGSLSIS*SRSRSW
Trigger: CCAAGAGCGGCTCCGGGAGCAGGAGATGGAGAGGCT...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGACATCAGAGCGCTCCATaGTCTCCCACAGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGHQSAP*SPTGAG
Trigger: CCCAGCGCCTGTGGGAGAGCATGGAGCGCTCTGATG...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGCATCAGAGCGCTCCATaGTCTCCCACAGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQHQSAP*SPTGAG
Trigger: CCCAGCGCCTGTGGGAGAGCATGGAGCGCTCTGATG...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCCAGGAGCGTCTTCATaGTCCTGCTGGGTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFPGASS*SCWVLS
Trigger: CGAGAGCACCCAGCAGGAGCATGAAGACGCTCCTGG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGTCTCGGGCTGCCTCCTaGAGCTGCTGTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQSRAAS*SCCSSS
Trigger: GGAGCTGGAACAGCAGCTGCAGGAGGCAGCCCGAGA...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGCCTCCCGCTCCCCCTaGAGCAGTGCTCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAASRSP*SSALSI
Trigger: GATGGAGAGAGCACTGCTGCAGGGGGAGCGGGAGGC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGTTCTCCTTCTCCTTTTaGAGTAGCTGCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQFSFSF*SSCRAA
Trigger: TGCTGCCCTGCAGCTACTGCAAAAGGAGAAGGAGAA...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCGTCCTGCAGTGTGGCTaGCAGGTTGCGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFVLQCG*QVARKA
Trigger: AGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGAC...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGTTGGTCTCAATGTCCTaGAGTGTGGCTGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQLVSMS*SVAARL
Trigger: CAACCTGGCAGCCACACTGCAGGACATTGAGACCAA...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGCTGGCACTGAGCCTCTaGCGCCGCCTTCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQLALSL*RRLLLQ
Trigger: CTGAAGCAGAAGGCGGCGGCAGAGGCTCAGTGCCAG...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGACTGGCACTGAGCCTCTaGCGCCGCCTTCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGLALSL*RRLLLQ
Trigger: CTGAAGCAGAAGGCGGCGGCAGAGGCTCAGTGCCAG...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGACTGGCACTGAGCCTCTaGCGCCGCCTTCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGLALSL*RRLLLQ
Trigger: CTGAAGCAGAAGGCGGCGGCAGAGGCTCAGTGCCAG...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGTCTTTCTCCACCAGCTaGTGCCTGCGGGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGSFSTS*CLRALS
Trigger: TGAGAGCGCCCGCAGGCAGCAGCTGGTGGAGAAAGA...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGCATCCAGGGCCTAGCTaGCTCCTATTGAGAGGATCC +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKHPGPS*LLLRGS
Trigger: GGATCCTCTCAATAGGAGCCAGCTAGGCCCTGGATG...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCTCACCAGGGAACTGTaGCTGGCACAGGCTGACGGT +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGLTREL*LAQADG
Trigger: ACCGTCAGCCTGTGCCAGCCACAGTTCCCTGGTGAG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCTGCCCACTTGGTGAATaGCTAGCACAGCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLCPLGE*LAQLPL
Trigger: CAGCGGAAGCTGTGCTAGCCATTCACCAAGTGGGCA...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATGCGGGCAGGCACCAATaGGGGCACAGAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDAGRHQ*GHRGSW
Trigger: CCAGGACCCTCTGTGCCCCCATTGGTGCCTGCCCGC...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGGGAGCGGGAACCACTTaGGCGAGACTGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGGAGTT*ARLWRL
Trigger: CAACCTCCACAGTCTCGCCCAAGTGGTTCCCGCTCC...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGGCTGCCAGGAATACTaGCGGGTTGGCTGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAGCQEY*RVGCGH
Trigger: GTGCCCGCAGCCAACCCGCCAGTATTCCTGGCAGCC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGCTCACGGAAAGGACTaGGAGGGCGGTCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGAHGKD*EGGPGV
Trigger: CACTCCAGGACCGCCCTCCCAGTCCTTTCCGTGAGC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGGCTCACGGAAAGGACTaGGAGGGCGGTCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQAHGKD*EGGPGV
Trigger: CACTCCAGGACCGCCCTCCCAGTCCTTTCCGTGAGC...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGTACCCGCTCTGTGCCTaGGGGCTCACGGAAAGGACT +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGYPLCA*GLTERT
Trigger: AGTCCTTTCCGTGAGCCCCCAGGCACAGAGCGGGTA...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGGGACTCTCAGGCGGCTaGAGGGTACGAGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGGLSGG*RVRVAA
Trigger: AGCAGCAACTCGTACCCTCCAGCCGCCTGAGAGTCC...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGATCAGGTGAAGTCCCGTaGGCTGCCCAGCGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGSGEVP*AAQRRG
Trigger: GCCCCGGCGCTGGGCAGCCCACGGGACTTCACCTGA...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGACCCGCAAGTCCCCACTaGAGAGCTTCCGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGPASPH*RASAEH
Trigger: GTGCTCAGCGGAAGCTCTCCAGTGGGGACTTGCGGG...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCTTGTCCCTGTCCTTCTaGATGCCTGTCTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLLSLSF*MPVSKA
Trigger: GGCCTTGGAGACAGGCATCCAGAAGGACAGGGACAA...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGTTGTCCCTGTCCTTCTaGATGCCTGTCTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKLSLSF*MPVSKA
Trigger: GGCCTTGGAGACAGGCATCCAGAAGGACAGGGACAA...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGCTGACGGGAAGCTTTaGCAGGCAAAGGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGADGKL*QAKAGE
Trigger: CTCCCCCGCCTTTGCCTGCCAAAGCTTCCCGTCAGC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGGGGCCAGCTGGCGCTTaGTCTCAATGTCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGGPAGA*SQCPAV
Trigger: CACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCC...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGACCATCCAGATGCGCATaGCCTCTGCAGACGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGPSRCA*PLQTGP
Trigger: TGGCCCCGTCTGCAGAGGCCATGCGCATCTGGATGG...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCACTTGGTGTCCTGCTaGGTCTTCAGGTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFHLVSC*VFRWEG
Trigger: CCCCTCCCACCTGAAGACCCAGCAGGACACCAAGTG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128326.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCACAAGGGTACAGGGTaGGAGTGCCCCGCAGATTCT +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFHKGTG*ECPADS
Trigger: AGAATCTGCGGGGCACTCTCACCCTGTACCCTTGTG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGATCCGCTGCTGGCTGGTaGGGAAAGTGGAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGSAAGW*GKWREG
Trigger: GCCTTCTCTCCACTTTCCTCACCAGCCAGCAGCGGA...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGCTGGGAGGTCTCTCATaGCCCCCTTTTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQLGGLS*PPFLPS
Trigger: GCTGGGCAGAAAAGGGGGTCATGAGAGACCTCCCAG...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGACTGGGAGGTCTCTCATaGCCCCCTTTTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGLGGLS*PPFLPS
Trigger: GCTGGGCAGAAAAGGGGGTCATGAGAGACCTCCCAG...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAGCATCCCACTGGCACTaGGCCTCTGCCGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGASHWH*ASAAAF
Trigger: GAAGGCGGCGGCAGAGGCTCAGTGCCAGTGGGATGC...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGGGATGGAATGATGCATaGGTGCAGGGAAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKGWNDA*VQGSLK
Trigger: CTTCAGGCTTCCCTGCACTCATGCATCATTCCATCC...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGCGGCTCTTCTCTGCGTaGGCTTCCTTTAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKRLFSA*ASFSIF
Trigger: GAAGATGCTAAAGGAAGCTCACGCAGAGAAGAGCCG...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCCGGCTCTTCTCTGCGTaGGCTTCCTTTAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLRLFSA*ASFSIF
Trigger: GAAGATGCTAAAGGAAGCTCACGCAGAGAAGAGCCG...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATGTGAGCCGGGTGGGCTaGCGAACAGGGAGCCCATCA +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHVSRVG*RTGSPS
Trigger: TGATGGGCTCCCTGTTCGGCAGCCCACCCGGCTCAC...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR GCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCATGCTCCTGCTGGGTaGTCTCGGTGCTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFHAPAG*SRCCCI
Trigger: AATGCAGCAGCACCGAGAGCACCCAGCAGGAGCATG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGCCAGGAGCGTCTTCATaGTCCTGCTGGGTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQPGASS*SCWVLS
Trigger: CGAGAGCACCCAGCAGGAGCATGAAGACGCTCCTGG...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGACCAGGAGCGTCTTCATaGTCCTGCTGGGTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGPGASS*SCWVLS
Trigger: CGAGAGCACCCAGCAGGAGCATGAAGACGCTCCTGG...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGGCTGCCTCCTGCAGCTaGTGTTCCAGCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGAASCS*CSSSFT
Trigger: AGTGAAGGAGCTGGAACAGCAGCTGCAGGAGGCAGC...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGTTCTCCTTCTCCTTTTaGAGTAGCTGCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQFSFSF*SSCRAA
Trigger: TGCTGCCCTGCAGCTACTGCAAAAGGAGAAGGAGAA...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAACTCCTGGTACCACTaGTCTAAGTCTACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQNSWYH*SKSTAG
Trigger: CCCTGCTGTAGACTTAGAGCAGTGGTACCAGGAGTT...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGGTGTGGCTGCCAGGTTaGGAGGAAGGCTACTGGTGC +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQVWLPG*EEGYWC
Trigger: GCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACAC...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAGTGTGGCTGCCAGGTTaGGAGGAAGGCTACTGGTGC +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGVWLPG*EEGYWC
Trigger: GCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACAC...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGGTCCTGCAGTGTGGCTaGCAGGTTGCGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQVLQCG*QVARKA
Trigger: AGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGAC...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGTTGGTCTCAATGTCCTaGAGTGTGGCTGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKLVSMS*SVAARL
Trigger: CAACCTGGCAGCCACACTGCAGGACATTGAGACCAA...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGAGATGCTGGTCTCCATaGTGTCTGAACTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKRCWSP*CLNSPG
Trigger: GCCTGGAGAGTTCAGACAGCATGGAGACCAGCATCT...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCCCATTTCCTCGATCTTaGCCATGTCCAGACCACTGG +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLPFPRS*PCPDHW
Trigger: CCAGTGGTCTGGACATGGGCAAGATCGAGGAAATGG...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGTCTTTCTCCACCAGCTaGTGCCTGCGGGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQSFSTS*CLRALS
Trigger: TGAGAGCGCCCGCAGGCAGCAGCTGGTGGAGAAAGA...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGATCTTTCTCCACCAGCTaGTGCCTGCGGGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGSFSTS*CLRALS
Trigger: TGAGAGCGCCCGCAGGCAGCAGCTGGTGGAGAAAGA...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGACGTGTAAGAGGCCGTaGCTGGGAGAACTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKTCKRP*LGELLF
Trigger: GAAAAGCAGTTCTCCCAGGCACGGCCTCTTACACGT...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGCGTAATAGGAAAGGGTaGGCTTCAGCCGATCAAAGA +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQRNRKG*ASADQR
Trigger: TCTTTGATCGGCTGAAGCGCACCCTTTCCTATTACG...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGCGTAATAGGAAAGGGTaGGCTTCAGCCGATCAAAGA +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTERNRKG*ASADQR
Trigger: TCTTTGATCGGCTGAAGCGCACCCTTTCCTATTACG...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGATGCGCATGGCCTCTaGAGACGGGGCCACCATGTA +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGDAHGL*RRGHHV
Trigger: TACATGGTGGCCCCGTCTGCAGAGGCCATGCGCATC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGGCGACAATGGGGATGTaGCAGCAGGCTTCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGATMGM*QQASCL
Trigger: CAGGCAAGAAGCCTGCTGCCACATCCCCATTGTCGC...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGCCCGCCGTTAGCCATTaGCGACAATGGGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQPAVSH*RQWGCG
Trigger: GCCACATCCCCATTGTCGCCAATGGCTAACGGCGGG...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGACCCGCCGTTAGCCATTaGCGACAATGGGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGPAVSH*RQWGCG
Trigger: GCCACATCCCCATTGTCGCCAATGGCTAACGGCGGG...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATCCCGGAGACCAGGGCTaGGAGGTCTCTCATGACCCC +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDPGDQG*EVSHDP
Trigger: GGGGTCATGAGAGACCTCCCAGCCCTGGTCTCCGGG...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGTCGGGGAGCAGGCACTaGAGACTGGAACTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQSGSRH*RLELGA
Trigger: AGCCCCAAGTTCCAGTCTCCAGTGCCTGCTCCCCGA...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCTGGGAGGGCGGTCCTaGAGTGTGCCGATCTTGTTT +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGLGGRS*SVPILF
Trigger: AAACAAGATCGGCACACTCCAGGACCGCCCTCCCAG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAATGGTCTCCAGGCGCTaGCGTTCCAGCCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGMVSRR*RSSLSI
Trigger: GATGGAGAGGCTGGAACGCCAGCGCCTGGAGACCAT...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAATGGTCTCCAGGCGCTaGCGTTCCAGCCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGMVSRR*RSSLSI
Trigger: GATGGAGAGGCTGGAACGCCAGCGCCTGGAGACCAT...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCACACAGGTTCAGGATaGTCTCCAGGCGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFHTGSG*SPGAGV
Trigger: AACGCCAGCGCCTGGAGACCATCCTGAACCTGTGTG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCCTCTCCAATACTaGGCAGCTCCCCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFWPLQY*AAPQSQ
Trigger: CTGAGACTGGGGAGCTGCCCAGTATTGGAGAGGCCA...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTCTTCATGCTCCTGCTaGGTGCTCTCGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFSSCSC*VLSVLL
Trigger: CAGCAGCACCGAGAGCACCCAGCAGGAGCATGAAGA...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATGACTCCTGTACTGCCTaGGCCCGGATCTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDDSCTA*ARICPA
Trigger: GGCTGGGCAGATCCGGGCCCAGGCAGTACAGGAGTC...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATGACTCCTGTACTGCCTaGGCCCGGATCTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHDSCTA*ARICPA
Trigger: GGCTGGGCAGATCCGGGCCCAGGCAGTACAGGAGTC...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGCTGACGGGAAGCTTTaGCAGGCAAAGGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAADGKL*QAKAGE
Trigger: CTCCCCCGCCTTTGCCTGCCAAAGCTTCCCGTCAGC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGCATCACTATCCATCTTaGAGCGGTAAACCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQHHYPS*SGKPAA
Trigger: AGCTGCAGGTTTACCGCTCCAAGATGGATAGTGATG...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGTGCGAGGAAGGCTACTaGTGCCATTCTGGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGCEEGY*CHSGRA
Trigger: TGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCA...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGCGAGGAAGGCTACTaGTGCCATTCTGGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFCEEGY*CHSGRA
Trigger: TGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCA...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGGGGCCAGCTGGCGCTTaGTCTCAATGTCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQGPAGA*SQCPAV
Trigger: CACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCC...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGCTGTAGGGCCAGCTaGCGCTTGGTCTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFCCRAS*RLVSMS
Trigger: GGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCA...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCCATGTCCAGACCACTaGCGCTGGACATGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFPCPDH*RWTCCP
Trigger: CGGACAACATGTCCAGCGCCAGTGGTCTGGACATGG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCGCAGGAAGGTGGATTaGCCCAGACACAACATGCAG +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGRRKVD*PRHNMQ
Trigger: CTGCATGTTGTGTCTGGGTCAATCCACCTTCCTGCG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCTGTGTGGTTCCCATTaGCCAGGCTCTCCGATTCAG +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFLCGSH*PGSPIQ
Trigger: CTGAATCGGAGAGCCTGGTCAATGGGAACCACACAG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCTGTGTGGTTCCCATTaGCCAGGCTCTCCGATTCAG +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGLCGSH*PGSPIQ
Trigger: CTGAATCGGAGAGCCTGGTCAATGGGAACCACACAG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATGGAGAAGTCCTCAGGTaGAGTCCCGTGGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDGEVLR*SPVGCP
Trigger: TGGGCAGCCCACGGGACTTCACCTGAGGACTTCTCC...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATGGGGCTCTGACGAGGTaGAGCCCCAGTAAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDGALTR*SPSKRA
Trigger: GGCTCTCTTACTGGGGCTTCACCTCGTCAGAGCCCC...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTGCTGCATTCCTCTTTaGGATTCTCTTCATCAGAGC +
Preference number: 4 (lower is better)
Translates to: QCATVPRDKQSGRWQGTECCIPL*DSLHQS
Trigger: GCTCTGATGAAGAGAATCTCAAAGAGGAATGCAGCA...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGTGCTGCATTCCTCTTTaGGATTCTCTTCATCAGAGC +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQCCIPL*DSLHQS
Trigger: GCTCTGATGAAGAGAATCTCAAAGAGGAATGCAGCA...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTCGGATCTGCCCAGCCTaGCTGTCCAGTACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASARICPA*LSSTAR
Trigger: CCTAGCTGTACTGGACAGTCAGGCTGGGCAGATCCG...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTCTTGCCACCCATCTTaGTCAGGTAGCCACGGCACA +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFSCHPS*SGSHGT
Trigger: TGTGCCGTGGCTACCTGATCAAGATGGGTGGCAAGA...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGTCTTGCCACCCATCTTaGTCAGGTAGCCACGGCACA +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGSCHPS*SGSHGT
Trigger: TGTGCCGTGGCTACCTGATCAAGATGGGTGGCAAGA...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATGCCACCACAGGTAACTaGCCACCTAGCCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDATTGN*PPSRGL
Trigger: GAGTCCCCGGCTAGGTGGGCAGTTACCTGTGGTGGC...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGATTAGTACCCGCTCTGTaGCTGGGGGCTCACGGAAAG +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGLVPAL*LGAHGK
Trigger: CTTTCCGTGAGCCCCCAGGCACAGAGCGGGTACTAA...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGATCTCGGCCACTTCCCTaGTTAGCTTGGGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGSRPLP*LAWDLG
Trigger: CCCCAGATCCCAAGCTAAGCAGGGAAGTGGCCGAGA...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAGCTACCCTTGCGAGGTaGCAGGGACTCCCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGATLAR*QGLPEG
Trigger: ACCCTCGGGGAGTCCCTGGCACCTCGCAAGGGTAGC...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATCATCAGAGCGCTCCATaGTCTCCCACAGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDHQSAP*SPTGAG
Trigger: CCCAGCGCCTGTGGGAGAGCATGGAGCGCTCTGATG...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTCCAGGAGCGTCTTCATaGTCCTGCTGGGTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAPGASS*SCWVLS
Trigger: CGAGAGCACCCAGCAGGAGCATGAAGACGCTCCTGG...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAGCTGCCTCCTGCAGCTaGTGTTCCAGCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGAASCS*CSSSFT
Trigger: AGTGAAGGAGCTGGAACAGCAGCTGCAGGAGGCAGC...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGCTGCCTCCTGCAGCTaGTGTTCCAGCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGAASCS*CSSSFT
Trigger: AGTGAAGGAGCTGGAACAGCAGCTGCAGGAGGCAGC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATCTCCCCCTGCAGCAGTaGTCTCTCCATCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDLPLQQ*SLHLGL
Trigger: GAGGCCGAGATGGAGAGAGCACTGCTGCAGGGGGAG...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGCCCTGTCCTTCTGGATaGCTGTCTCCAAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQPCPSG*LSPRPP
Trigger: TGGTGGCCTTGGAGACAGGCATCCAGAAGGACAGGG...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGTCCTTTTGCAGTAGCTaGAGGGCAGCATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQSFCSS*RAAFFS
Trigger: GGAAAAGAATGCTGCCCTGCAGCTACTGCAAAAGGA...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGTGTGGCTGCCAGGTTaGGAGGAAGGCTACTGGTGC +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAVWLPG*EEGYWC
Trigger: GCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACAC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATCTGGCACTGAGCCTCTaGCGCCGCCTTCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHLALSL*RRLLLQ
Trigger: CTGAAGCAGAAGGCGGCGGCAGAGGCTCAGTGCCAG...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCATCCAGGGCCTAGCTaGCTCCTATTGAGAGGATCC +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFHPGPS*LLLRGS
Trigger: GGATCCTCTCAATAGGAGCCAGCTAGGCCCTGGATG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTTCTGCACTACAGCCTaGGTCTTGCATCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFFCTTA*VLHPGP
Trigger: AGGCCCTGGATGCAAGACCCAGGCTGTAGTGCAGAA...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGATGTAGCAGTGTTCTaGAGCCAGGCCTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGDVAVF*SQAWTL
Trigger: CAGGGTCCAGGCCTGGCTCCAGAACACTGCTACATC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGACCAGGGAACTGTGGCTaGCACAGGCTGACGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGPGNCG*HRLTVP
Trigger: GGGCACCGTCAGCCTGTGCCAGCCACAGTTCCCTGG...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTCTCACCAGGGAACTGTaGCTGGCACAGGCTGACGGT +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASALTREL*LAQADG
Trigger: ACCGTCAGCCTGTGCCAGCCACAGTTCCCTGGTGAG...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATTGGAGCCCACAGACATaGCACCGGGGCTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDWSPQT*HRGWLE
Trigger: CTCCAACCAGCCCCGGTGCCATGTCTGTGGGCTCCA...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGCACAGCTTCCGCTGCTaGCTGGTGAGGAAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQHSFRC*LVRKVE
Trigger: CTCCACTTTCCTCACCAGCCAGCAGCGGAAGCTGTG...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATGCTCACGGAAAGGACTaGGAGGGCGGTCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDAHGKD*EGGPGV
Trigger: CACTCCAGGACCGCCCTCCCAGTCCTTTCCGTGAGC...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGGACTCTCAGGCGGCTaGAGGGTACGAGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAGLSGG*RVRVAA
Trigger: AGCAGCAACTCGTACCCTCCAGCCGCCTGAGAGTCC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATAGTCCGGGCTGGCAGTaGGGACAGAGCCCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDSPGWQ*GQSPSR
Trigger: TCTCGAAGGGCTCTGTCCCCACTGCCAGCCCGGACT...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATCCCGCAAGTCCCCACTaGAGAGCTTCCGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHPASPH*RASAEH
Trigger: GTGCTCAGCGGAAGCTCTCCAGTGGGGACTTGCGGG...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGATCCTCTCCCTTGGAATaGGTACCCGCAAGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGSSPLE*VPASPH
Trigger: GTGGGGACTTGCGGGTACCCATTCCAAGGGAGAGGA...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGATGGCCTCTCCAATACTaGGCAGCTCCCCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGWPLQY*AAPQSQ
Trigger: CTGAGACTGGGGAGCTGCCCAGTATTGGAGAGGCCA...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCAACTTCTCCTGCAGCTaGTCCACCGCCCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFNFSCS*STALCS
Trigger: GGAACAAAGGGCGGTGGACCAGCTGCAGGAGAAGTT...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAGACTCCTGTACTGCCTaGGCCCGGATCTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGDSCTA*ARICPA
Trigger: GGCTGGGCAGATCCGGGCCCAGGCAGTACAGGAGTC...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGATGCGAGGAAGGCTACTaGTGCCATTCTGGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGCEEGY*CHSGRA
Trigger: TGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCA...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGATGCGAGGAAGGCTACTaGTGCCATTCTGGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGCEEGY*CHSGRA
Trigger: TGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCA...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGGGCCAGCTGGCGCTTaGTCTCAATGTCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAGPAGA*SQCPAV
Trigger: CACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGATGCTGTAGGGCCAGCTaGCGCTTGGTCTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGCCRAS*RLVSMS
Trigger: GGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCA...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGTGCTGTAGGGCCAGCTaGCGCTTGGTCTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQCCRAS*RLVSMS
Trigger: GGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCA...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGACCATGTCCAGACCACTaGCGCTGGACATGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGPCPDH*RWTCCP
Trigger: CGGACAACATGTCCAGCGCCAGTGGTCTGGACATGG...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGTGGCTGCAGAACCAATaGCTGTCCTCCCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQWLQNQ*LSSLPP
Trigger: TGGAGGAAGGGAGGACAGTCATTGGTTCTGCAGCCA...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGACGCAGGAAGGTGGATTaGCCCAGACACAACATGCAG +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGRRKVD*PRHNMQ
Trigger: CTGCATGTTGTGTCTGGGTCAATCCACCTTCCTGCG...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATTCCGCTGCTGGCTGGTaGGGAAAGTGGAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHSAAGW*GKWREG
Trigger: GCCTTCTCTCCACTTTCCTCACCAGCCAGCAGCGGA...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATCTGGGAGGTCTCTCATaGCCCCCTTTTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDLGGLS*PPFLPS
Trigger: GCTGGGCAGAAAAGGGGGTCATGAGAGACCTCCCAG...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGATCCTGCCAAGCCTCTTaGGGGCCTCCTGCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGSCQAS*GPPACQ
Trigger: TTGGCAGGCAGGAGGCCCTCAAGAGGCTTGGCAGGA...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCGGCTCTTCTCTGCGTaGGCTTCCTTTAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGRLFSA*ASFSIF
Trigger: GAAGATGCTAAAGGAAGCTCACGCAGAGAAGAGCCG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGGCTTTTCCCGGAGCTTaGCTTCTTTCTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGAFPGA*LLSPPA
Trigger: AGCTGGTGGAGAAAGAAGTCAAGCTCCGGGAAAAGC...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCGCTTTTCCCGGAGCTTaGCTTCTTTCTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFAFPGA*LLSPPA
Trigger: AGCTGGTGGAGAAAGAAGTCAAGCTCCGGGAAAAGC...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCCTGGAAATAGATaGCCCCCTTCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFWPGNR*PPSASS
Trigger: AGACGAAGCTGAAGGGGGTCATCTATTTCCAGGCCA...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAGCCAGGCCTGGACCCTaGAGTGAGATGTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGARPGP*SEMSLA
Trigger: AGCCAGGGACATCTCACTGCAGGGTCCAGGCCTGGC...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGCCGGGTTGCAGGTTGTaGTGTGTGGTTCCCATTGAC +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQPGCRL*CVVPID
Trigger: GTCAATGGGAACCACACAGCACAACCTGCAACCCGG...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR GCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGAGGGTCCTGGCTCCTaGCCACTTGGTGAATGGCTA +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAEGPGS*PLGEWL
Trigger: TAGCCATTCACCAAGTGGGCAGGAGCCAGGACCCTC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAACTGGAACTTGGGGCTaGCAGGAATACTGGCGGGTT +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGTGTWG*QEYWRV
Trigger: AACCCGCCAGTATTCCTGGCAGCCCCAAGTTCCAGT...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATGGCGGTCCTGGAGTGTaGCGATCTTGTTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHGGPGV*RSCFGE
Trigger: CTCCCCGAAACAAGATCGGCACACTCCAGGACCGCC...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTTCTCGGCCACTTCCCTaGTTAGCTTGGGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASASRPLP*LAWDLG
Trigger: CCCCAGATCCCAAGCTAAGCAGGGAAGTGGCCGAGA...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATCCAGGAGCGTCTTCATaGTCCTGCTGGGTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDPGASS*SCWVLS
Trigger: CGAGAGCACCCAGCAGGAGCATGAAGACGCTCCTGG...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGACTCCCCCTGCAGCAGTaGTCTCTCCATCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGLPLQQ*SLHLGL
Trigger: GAGGCCGAGATGGAGAGAGCACTGCTGCAGGGGGAG...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATGTGTGGCTGCCAGGTTaGGAGGAAGGCTACTGGTGC +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDVWLPG*EEGYWC
Trigger: GCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACAC...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATGTCCTGCAGTGTGGCTaGCAGGTTGCGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHVLQCG*QVARKA
Trigger: AGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGAC...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCAGATGCTGGTCTCCATaGTGTCTGAACTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFRCWSP*CLNSPG
Trigger: GCCTGGAGAGTTCAGACAGCATGGAGACCAGCATCT...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCCATTTCCTCGATCTTaGCCATGTCCAGACCACTGG +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGPFPRS*PCPDHW
Trigger: CCAGTGGTCTGGACATGGGCAAGATCGAGGAAATGG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCCGTAATAGGAAAGGGTaGGCTTCAGCCGATCAAAGA +
Preference number: 4 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLRNRKG*ASADQR
Trigger: TCTTTGATCGGCTGAAGCGCACCCTTTCCTATTACG...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGATTCGGACTCTTGGCTaGGCTGCGCAGGTGGTCATA +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQIRTLG*AAQVVI
Trigger: TATGACCACCTGCGCAGCGCAGCCAAGAGTCCGAAT...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000144251.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAATTCGGACTCTTGGCTaGGCTGCGCAGGTGGTCATA +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGIRTLG*AAQVVI
Trigger: TATGACCACCTGCGCAGCGCAGCCAAGAGTCCGAAT...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000144251.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATGATGCGCATGGCCTCTaGAGACGGGGCCACCATGTA +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDDAHGL*RRGHHV
Trigger: TACATGGTGGCCCCGTCTGCAGAGGCCATGCGCATC...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAATCTCCCGCTCCACCTaGTGCCTCCTGGCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGISRST*CLLAPV
Trigger: GACTGGAGCCAGGAGGCAGCAGGTGGAGCGGGAGAT...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138356.8
CDS-3UTR CCA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCCACTTGGCTTCGGCTaGATGGTTAAAGCGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGPLGFG*MVKAQE
Trigger: TTCCTGCGCTTTAACCATCCAGCCGAAGCCAAGTGG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTCACAGCTTCCGCTGCTaGCTGGTGAGGAAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAHSFRC*LVRKVE
Trigger: CTCCACTTTCCTCACCAGCCAGCAGCGGAAGCTGTG...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGATGCCCACTTGGTGAATaGCTAGCACAGCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGCPLGE*LAQLPL
Trigger: CAGCGGAAGCTGTGCTAGCCATTCACCAAGTGGGCA...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGTGCCCACTTGGTGAATaGCTAGCACAGCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQCPLGE*LAQLPL
Trigger: CAGCGGAAGCTGTGCTAGCCATTCACCAAGTGGGCA...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAGCGGGCACCGGAAGATaGGTATTCACTCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGAGTGR*VFTQAD
Trigger: ATCAGCCTGAGTGAATACCCATCTTCCGGTGCCCGC...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATTACCCGCTCTGTGCCTaGGGGCTCACGGAAAGGACT +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDYPLCA*GLTERT
Trigger: AGTCCTTTCCGTGAGCCCCCAGGCACAGAGCGGGTA...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATGGACTCTCAGGCGGCTaGAGGGTACGAGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHGLSGG*RVRVAA
Trigger: AGCAGCAACTCGTACCCTCCAGCCGCCTGAGAGTCC...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGACCTTCGAGACAGAGATaGACTCAACGGGGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGPSRQR*TQRGQF
Trigger: GAACTGCCCCCGTTGAGTCCATCTCTGTCTCGAAGG...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATATGGTCTCCAGGCGCTaGCGTTCCAGCCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHMVSRR*RSSLSI
Trigger: GATGGAGAGGCTGGAACGCCAGCGCCTGGAGACCAT...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAAACTTCTCCTGCAGCTaGTCCACCGCCCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGNFSCS*STALCS
Trigger: GGAACAAAGGGCGGTGGACCAGCTGCAGGAGAAGTT...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGAACTTCTCCTGCAGCTaGTCCACCGCCCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQNFSCS*STALCS
Trigger: GGAACAAAGGGCGGTGGACCAGCTGCAGGAGAAGTT...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAAACTTCTCCTGCAGCTaGTCCACCGCCCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGNFSCS*STALCS
Trigger: GGAACAAAGGGCGGTGGACCAGCTGCAGGAGAAGTT...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGATTGTCCCTGTCCTTCTaGATGCCTGTCTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGLSLSF*MPVSKA
Trigger: GGCCTTGGAGACAGGCATCCAGAAGGACAGGGACAA...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGGTCACCATGGTGAAGTaGAAAAACCTTTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQVTMVK*KNLFLA
Trigger: AGCCAAGAAAAGGTTTTTCCACTTCACCATGGTGAC...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTCGCAGGAAGGTGGATTaGCCCAGACACAACATGCAG +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASARRKVD*PRHNMQ
Trigger: CTGCATGTTGTGTCTGGGTCAATCCACCTTCCTGCG...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGACTGGGAGGTCTCTCATaGCCCCCTTTTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGLGGLS*PPFLPS
Trigger: GCTGGGCAGAAAAGGGGGTCATGAGAGACCTCCCAG...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGTGCTGCATTCCTCTTTaGGATTCTCTTCATCAGAGC +
Preference number: 4 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKCCIPL*DSLHQS
Trigger: GCTCTGATGAAGAGAATCTCAAAGAGGAATGCAGCA...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGACGGATCTGCCCAGCCTaGCTGTCCAGTACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGRICPA*LSSTAR
Trigger: CCTAGCTGTACTGGACAGTCAGGCTGGGCAGATCCG...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAGGATGGAATGATGCATaGGTGCAGGGAAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGGWNDA*VQGSLK
Trigger: CTTCAGGCTTCCCTGCACTCATGCATCATTCCATCC...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGGGATGGAATGATGCATaGGTGCAGGGAAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQGWNDA*VQGSLK
Trigger: CTTCAGGCTTCCCTGCACTCATGCATCATTCCATCC...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGCGGCTCTTCTCTGCGTaGGCTTCCTTTAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQRLFSA*ASFSIF
Trigger: GAAGATGCTAAAGGAAGCTCACGCAGAGAAGAGCCG...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAGCTTTTCCCGGAGCTTaGCTTCTTTCTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGAFPGA*LLSPPA
Trigger: AGCTGGTGGAGAAAGAAGTCAAGCTCCGGGAAAAGC...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTTCTTGCCACCCATCTTaGTCAGGTAGCCACGGCACA +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASASCHPS*SGSHGT
Trigger: TGTGCCGTGGCTACCTGATCAAGATGGGTGGCAAGA...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGATGGCCTGGAAATAGATaGCCCCCTTCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGWPGNR*PPSASS
Trigger: AGACGAAGCTGAAGGGGGTCATCTATTTCCAGGCCA...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATGAGGGTCCTGGCTCCTaGCCACTTGGTGAATGGCTA +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDEGPGS*PLGEWL
Trigger: TAGCCATTCACCAAGTGGGCAGGAGCCAGGACCCTC...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATGCTGCCTCCTGCAGCTaGTGTTCCAGCTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDAASCS*CSSSFT
Trigger: AGTGAAGGAGCTGGAACAGCAGCTGCAGGAGGCAGC...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATCCCTGTCCTTCTGGATaGCTGTCTCCAAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDPCPSG*LSPRPP
Trigger: TGGTGGCCTTGGAGACAGGCATCCAGAAGGACAGGG...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCAACTCCTGGTACCACTaGTCTAAGTCTACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFNSWYH*SKSTAG
Trigger: CCCTGCTGTAGACTTAGAGCAGTGGTACCAGGAGTT...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAGTCCTGCAGTGTGGCTaGCAGGTTGCGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGVLQCG*QVARKA
Trigger: AGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGAC...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATACTTGGTGTCCCTTTTaGTGTAGGGCCAGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHTWCPF*CRASWR
Trigger: GCGCCAGCTGGCCCTACAGCAAAAGGGACACCAAGT...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAAGATGCTGGTCTCCATaGTGTCTGAACTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGRCWSP*CLNSPG
Trigger: GCCTGGAGAGTTCAGACAGCATGGAGACCAGCATCT...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAAGATGCTGGTCTCCATaGTGTCTGAACTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGRCWSP*CLNSPG
Trigger: GCCTGGAGAGTTCAGACAGCATGGAGACCAGCATCT...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGCCATTTCCTCGATCTTaGCCATGTCCAGACCACTGG +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQPFPRS*PCPDHW
Trigger: CCAGTGGTCTGGACATGGGCAAGATCGAGGAAATGG...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGATCTTTCTCCACCAGCTaGTGCCTGCGGGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGSFSTS*CLRALS
Trigger: TGAGAGCGCCCGCAGGCAGCAGCTGGTGGAGAAAGA...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAACGTGTAAGAGGCCGTaGCTGGGAGAACTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGTCKRP*LGELLF
Trigger: GAAAAGCAGTTCTCCCAGGCACGGCCTCTTACACGT...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAGATGCGCATGGCCTCTaGAGACGGGGCCACCATGTA +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGDAHGL*RRGHHV
Trigger: TACATGGTGGCCCCGTCTGCAGAGGCCATGCGCATC...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTCATCCAGGGCCTAGCTaGCTCCTATTGAGAGGATCC +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAHPGPS*LLLRGS
Trigger: GGATCCTCTCAATAGGAGCCAGCTAGGCCCTGGATG...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATGATGTAGCAGTGTTCTaGAGCCAGGCCTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHDVAVF*SQAWTL
Trigger: CAGGGTCCAGGCCTGGCTCCAGAACACTGCTACATC...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGACCACTTGGCTTCGGCTaGATGGTTAAAGCGCAGGAA +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGPLGFG*MVKAQE
Trigger: TTCCTGCGCTTTAACCATCCAGCCGAAGCCAAGTGG...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAGGCCCGGACCCCTGCTaGAATCATACTTTTCATCCA +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGGPDPC*NHTFHP
Trigger: TGGATGAAAAGTATGATTCCAGCAGGGGTCCGGGCC...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATGCGACAATGGGGATGTaGCAGCAGGCTTCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDATMGM*QQASCL
Trigger: CAGGCAAGAAGCCTGCTGCCACATCCCCATTGTCGC...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAACTTGGGCGAGACTGTaGAGGTTGCAGAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGTWARL*RLQSQM
Trigger: CATTTGGCTCTGCAACCTCCACAGTCTCGCCCAAGT...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATCTGGGAGGGCGGTCCTaGAGTGTGCCGATCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHLGGRS*SVPILF
Trigger: AAACAAGATCGGCACACTCCAGGACCGCCCTCCCAG...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATCACACAGGTTCAGGATaGTCTCCAGGCGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDHTGSG*SPGAGV
Trigger: AACGCCAGCGCCTGGAGACCATCCTGAACCTGTGTG...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATCACACAGGTTCAGGATaGTCTCCAGGCGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHHTGSG*SPGAGV
Trigger: AACGCCAGCGCCTGGAGACCATCCTGAACCTGTGTG...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATTGCGAGGAAGGCTACTaGTGCCATTCTGGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDCEEGY*CHSGRA
Trigger: TGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCA...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATTGCGAGGAAGGCTACTaGTGCCATTCTGGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHCEEGY*CHSGRA
Trigger: TGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCA...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATTGCTGTAGGGCCAGCTaGCGCTTGGTCTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHCCRAS*RLVSMS
Trigger: GGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCA...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATCCATGTCCAGACCACTaGCGCTGGACATGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDPCPDH*RWTCCP
Trigger: CGGACAACATGTCCAGCGCCAGTGGTCTGGACATGG...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATATGGGAGCCAAGTCCTaGGAGGCAGAAGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDMGAKS*EAEAQE
Trigger: TTCCTGGGCTTCTGCCTCCCAGGACTTGGCTCCCAT...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000135436.8
ENSMUST00000138356.8
CDS-3UTR TCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGGATGGAATGATGCATaGGTGCAGGGAAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAGWNDA*VQGSLK
Trigger: CTTCAGGCTTCCCTGCACTCATGCATCATTCCATCC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTCGGCTCTTCTCTGCGTaGGCTTCCTTTAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASARLFSA*ASFSIF
Trigger: GAAGATGCTAAAGGAAGCTCACGCAGAGAAGAGCCG...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTTGGCCTGGAAATAGATaGCCCCCTTCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAWPGNR*PPSASS
Trigger: AGACGAAGCTGAAGGGGGTCATCTATTTCCAGGCCA...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGATCTCGGCCACTTCCCTaGTTAGCTTGGGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGSRPLP*LAWDLG
Trigger: CCCCAGATCCCAAGCTAAGCAGGGAAGTGGCCGAGA...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR GCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGACCCTGTCCTTCTGGATaGCTGTCTCCAAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGPCPSG*LSPRPP
Trigger: TGGTGGCCTTGGAGACAGGCATCCAGAAGGACAGGG...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTCCTTTTGCAGTAGCTaGAGGGCAGCATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFSFCSS*RAAFFS
Trigger: GGAAAAGAATGCTGCCCTGCAGCTACTGCAAAAGGA...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGATTCTCCTTCTCCTTTTaGAGTAGCTGCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGFSFSF*SSCRAA
Trigger: TGCTGCCCTGCAGCTACTGCAAAAGGAGAAGGAGAA...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTTTGGTCTCAATGTCCTaGAGTGTGGCTGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASALVSMS*SVAARL
Trigger: CAACCTGGCAGCCACACTGCAGGACATTGAGACCAA...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAACTTGGTGTCCCTTTTaGTGTAGGGCCAGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGTWCPF*CRASWR
Trigger: GCGCCAGCTGGCCCTACAGCAAAAGGGACACCAAGT...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTAGATGCTGGTCTCCATaGTGTCTGAACTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASARCWSP*CLNSPG
Trigger: GCCTGGAGAGTTCAGACAGCATGGAGACCAGCATCT...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGGCCCGGACCCCTGCTaGAATCATACTTTTCATCCA +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAGPDPC*NHTFHP
Trigger: TGGATGAAAAGTATGATTCCAGCAGGGGTCCGGGCC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGACACAGCTTCCGCTGCTaGCTGGTGAGGAAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGHSFRC*LVRKVE
Trigger: CTCCACTTTCCTCACCAGCCAGCAGCGGAAGCTGTG...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGACTGGGAGGGCGGTCCTaGAGTGTGCCGATCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGLGGRS*SVPILF
Trigger: AAACAAGATCGGCACACTCCAGGACCGCCCTCCCAG...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATCCTTCGAGACAGAGATaGACTCAACGGGGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDPSRQR*TQRGQF
Trigger: GAACTGCCCCCGTTGAGTCCATCTCTGTCTCGAAGG...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGATCCTCTCCCTTGGAATaGGTACCCGCAAGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGSSPLE*VPASPH
Trigger: GTGGGGACTTGCGGGTACCCATTCCAAGGGAGAGGA...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGACCGGACATCAACTCCTaGTACCACTGCTCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGPDINS*YHCSKS
Trigger: AGACTTAGAGCAGTGGTACCAGGAGTTGATGTCCGG...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCATCACTATCCATCTTaGAGCGGTAAACCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFHHYPS*SGKPAA
Trigger: AGCTGCAGGTTTACCGCTCCAAGATGGATAGTGATG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATCAATGTCCTGCAGTGTaGCTGCCAGGTTGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDQCPAV*LPGCEE
Trigger: TTCCTCGCAACCTGGCAGCCACACTGCAGGACATTG...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATCAATGTCCTGCAGTGTaGCTGCCAGGTTGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHQCPAV*LPGCEE
Trigger: TTCCTCGCAACCTGGCAGCCACACTGCAGGACATTG...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGATGCTGTAGGGCCAGCTaGCGCTTGGTCTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGCCRAS*RLVSMS
Trigger: GGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCA...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGACCATGTCCAGACCACTaGCGCTGGACATGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGPCPDH*RWTCCP
Trigger: CGGACAACATGTCCAGCGCCAGTGGTCTGGACATGG...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATGCTTTTCCCGGAGCTTaGCTTCTTTCTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDAFPGA*LLSPPA
Trigger: AGCTGGTGGAGAAAGAAGTCAAGCTCCGGGAAAAGC...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATTGGCCTGGAAATAGATaGCCCCCTTCAGCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDWPGNR*PPSASS
Trigger: AGACGAAGCTGAAGGGGGTCATCTATTTCCAGGCCA...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGATCCTTTTGCAGTAGCTaGAGGGCAGCATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGSFCSS*RAAFFS
Trigger: GGAAAAGAATGCTGCCCTGCAGCTACTGCAAAAGGA...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATTTGGTCTCAATGTCCTaGAGTGTGGCTGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHLVSMS*SVAARL
Trigger: CAACCTGGCAGCCACACTGCAGGACATTGAGACCAA...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATAGATGCTGGTCTCCATaGTGTCTGAACTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDRCWSP*CLNSPG
Trigger: GCCTGGAGAGTTCAGACAGCATGGAGACCAGCATCT...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATCCATTTCCTCGATCTTaGCCATGTCCAGACCACTGG +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHPFPRS*PCPDHW
Trigger: CCAGTGGTCTGGACATGGGCAAGATCGAGGAAATGG...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATACGTGTAAGAGGCCGTaGCTGGGAGAACTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDTCKRP*LGELLF
Trigger: GAAAAGCAGTTCTCCCAGGCACGGCCTCTTACACGT...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp AAACTTCACCCAGAACTCAACCACCCAGGAAGAAGATGGCACACCAAACTCTGGCTGACCCTTCTCAGCTaGTCCTGTAACTGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: KLHPELNHPGRRWHTKLWLTLLS*SCNCSR
Trigger: GCGGGAACAGTTACAGGAGCAGCTGAGAAGGGTCAG...CCAGAGTTTGGTGTGCCATCTTCTTCCTGGGTGGTTGAGTTCTGGGTGAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123123.2
CDS-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATCCACTTGGCTTCGGCTaGATGGTTAAAGCGCAGGAA +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDPLGFG*MVKAQE
Trigger: TTCCTGCGCTTTAACCATCCAGCCGAAGCCAAGTGG...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATCCACTTGGCTTCGGCTaGATGGTTAAAGCGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHPLGFG*MVKAQE
Trigger: TTCCTGCGCTTTAACCATCCAGCCGAAGCCAAGTGG...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGATGCCCACTTGGTGAATaGCTAGCACAGCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGCPLGE*LAQLPL
Trigger: CAGCGGAAGCTGTGCTAGCCATTCACCAAGTGGGCA...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTCCGGACATCAACTCCTaGTACCACTGCTCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAPDINS*YHCSKS
Trigger: AGACTTAGAGCAGTGGTACCAGGAGTTGATGTCCGG...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGCATCACTATCCATCTTaGAGCGGTAAACCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQHHYPS*SGKPAA
Trigger: AGCTGCAGGTTTACCGCTCCAAGATGGATAGTGATG...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGCACCAATGAATCCATaGTTTCCTGCAGGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGAPMNP*FPAGPF
Trigger: AAAAGGACCTGCAGGAAATCATGGATTCATTGGTGC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGATGCTGCATTCCTCTTTaGGATTCTCTTCATCAGAGC +
Preference number: 4 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGCCIPL*DSLHQS
Trigger: GCTCTGATGAAGAGAATCTCAAAGAGGAATGCAGCA...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGTGCTGCATTCCTCTTTaGGATTCTCTTCATCAGAGC +
Preference number: 4 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQCCIPL*DSLHQS
Trigger: GCTCTGATGAAGAGAATCTCAAAGAGGAATGCAGCA...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR TCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGACGGCTCTTCTCTGCGTaGGCTTCCTTTAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGRLFSA*ASFSIF
Trigger: GAAGATGCTAAAGGAAGCTCACGCAGAGAAGAGCCG...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATTTCTCCTTCTCCTTTTaGAGTAGCTGCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHFSFSF*SSCRAA
Trigger: TGCTGCCCTGCAGCTACTGCAAAAGGAGAAGGAGAA...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGATTGGTCTCAATGTCCTaGAGTGTGGCTGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGLVSMS*SVAARL
Trigger: CAACCTGGCAGCCACACTGCAGGACATTGAGACCAA...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAAGATGCTGGTCTCCATaGTGTCTGAACTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGRCWSP*CLNSPG
Trigger: GCCTGGAGAGTTCAGACAGCATGGAGACCAGCATCT...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR GCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAACGTGTAAGAGGCCGTaGCTGGGAGAACTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGTCKRP*LGELLF
Trigger: GAAAAGCAGTTCTCCCAGGCACGGCCTCTTACACGT...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAGGCCCGGACCCCTGCTaGAATCATACTTTTCATCCA +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGGPDPC*NHTFHP
Trigger: TGGATGAAAAGTATGATTCCAGCAGGGGTCCGGGCC...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATCCGGACATCAACTCCTaGTACCACTGCTCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDPDINS*YHCSKS
Trigger: AGACTTAGAGCAGTGGTACCAGGAGTTGATGTCCGG...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTCATCACTATCCATCTTaGAGCGGTAAACCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAHHYPS*SGKPAA
Trigger: AGCTGCAGGTTTACCGCTCCAAGATGGATAGTGATG...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGCACCAATGAATCCATaGTTTCCTGCAGGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAAPMNP*FPAGPF
Trigger: AAAAGGACCTGCAGGAAATCATGGATTCATTGGTGC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR GCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATTCCTTTTGCAGTAGCTaGAGGGCAGCATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDSFCSS*RAAFFS
Trigger: GGAAAAGAATGCTGCCCTGCAGCTACTGCAAAAGGA...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGACCGGACATCAACTCCTaGTACCACTGCTCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGPDINS*YHCSKS
Trigger: AGACTTAGAGCAGTGGTACCAGGAGTTGATGTCCGG...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR TCA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATTGCTGCATTCCTCTTTaGGATTCTCTTCATCAGAGC +
Preference number: 4 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDCCIPL*DSLHQS
Trigger: GCTCTGATGAAGAGAATCTCAAAGAGGAATGCAGCA...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGACATCACTATCCATCTTaGAGCGGTAAACCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGHHYPS*SGKPAA
Trigger: AGCTGCAGGTTTACCGCTCCAAGATGGATAGTGATG...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CCA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTGTCACCATGGTGAAGTaGAAAAACCTTTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SHHLWETEGRLPQLRASAVTMVK*KNLFLA
Trigger: AGCCAAGAAAAGGTTTTTCCACTTCACCATGGTGAC...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR TCA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGATGCTGCATTCCTCTTTaGGATTCTCTTCATCAGAGC +
Preference number: 4 (lower is better)
Translates to: LETYPPFSFPITFGKLKGCCIPL*DSLHQS
Trigger: GCTCTGATGAAGAGAATCTCAAAGAGGAATGCAGCA...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
3UTR CAA 72 bp CCAAGCACCAAACTCCTCATAACACAATTTGTCTTCTaGCACAAAAGCCCCGAGGTACTCAACTACATCCCG +
Preference number: 4 (lower is better)
Translates to: PSTKLLITQFVF*HKSPEVLNYIP
Trigger: CGGGATGTAGTTGAGTACCTCGGGGCTTTTGTGCAAGAAGACAAATTGTGTTATGAGGAGTTTGGTGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGGCTCCGCAGCAGCCCTaGGCCGGCCAGCTCCCGCTC +
Preference number: 5 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQAPQQP*AGQLPL
Trigger: GAGCGGGAGCTGGCCGGCCAAGGGCTGCTGCGGAGC...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCCTCCCGGAGCCGCTCTaGGCGCTGCCGACGGTGGTA +
Preference number: 5 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFLPEPL*ALPTVV
Trigger: TACCACCGTCGGCAGCGCCAAGAGCGGCTCCGGGAG...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCCAGCCGCCGCTCCACTaGCTCCCGCCTCCTCCGTTC +
Preference number: 5 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFQPPLH*LPPPPF
Trigger: GAACGGAGGAGGCGGGAGCAAGTGGAGCGGCGGCTG...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGACTCCCGGAGCCGCTCTaGGCGCTGCCGACGGTGGTA +
Preference number: 5 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGLPEPL*ALPTVV
Trigger: TACCACCGTCGGCAGCGCCAAGAGCGGCTCCGGGAG...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGGCTCCGCAGCAGCCCTaGGCCGGCCAGCTCCCGCTC +
Preference number: 5 (lower is better)
Translates to: QCATVPRDKQSGRWQGTEAPQQP*AGQLPL
Trigger: GAGCGGGAGCTGGCCGGCCAAGGGCTGCTGCGGAGC...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGTGGCACCGGGGCTGGTaGGAGGGGACAACAGGTAGC +
Preference number: 5 (lower is better)
Translates to: GTSRVAGGRARSPGAELGWHRGW*EGTTGS
Trigger: GCTACCTGTTGTCCCCTCCAACCAGCCCCGGTGCCA...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGGCTCCGCAGCAGCCCTaGGCCGGCCAGCTCCCGCTC +
Preference number: 5 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQAPQQP*AGQLPL
Trigger: GAGCGGGAGCTGGCCGGCCAAGGGCTGCTGCGGAGC...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGCGCAGCAACTCAGCCTaGCTCCGCAGCAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: GTSRVAGGRARSPGAELGRSNSA*LRSSPW
Trigger: CCAAGGGCTGCTGCGGAGCAAGGCTGAGTTGCTGCG...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGCTGACGGTGCCCGGGTaGCAGGTTGTGCTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQLTVPG*QVVLCG
Trigger: ACCACACAGCACAACCTGCAACCCGGGCACCGTCAG...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCCTGACGGTGCCCGGGTaGCAGGTTGTGCTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFLTVPG*QVVLCG
Trigger: ACCACACAGCACAACCTGCAACCCGGGCACCGTCAG...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAGTGGCAGCAGGCTTCTaGCCTGCAGCTCCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGVAAGF*PAAPGS
Trigger: GGAGCCTGGAGCTGCAGGCAAGAAGCCTGCTGCCAC...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGAGGAATACTGGCGGGTaGGCTGCGGGCACCGGAAGA +
Preference number: 5 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQRNTGG*AAGTGR
Trigger: TCTTCCGGTGCCCGCAGCCAACCCGCCAGTATTCCT...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGCGCAGCAACTCAGCCTaGCTCCGCAGCAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWRSNSA*LRSSPW
Trigger: CCAAGGGCTGCTGCGGAGCAAGGCTGAGTTGCTGCG...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 90 bp GAGGTGCCAGGGACTCCCCGAGGGTGGGCGAGGGACTCCGAGTCCTaGGACCCCGTGCTCCTAGAGTCAGGGAGAAGTCCTCAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: EVPGTPRGWARDSES*DPVLLESGRSPQVK
Trigger: CTTCACCTGAGGACTTCTCCCTGACTCTAGGAGCACGGGGTCGCAGGACTCGGAGTCCCTCGCCCACCCTCGGGGAGTCCCTGGCACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS GCA 90 bp ACTGTAAGCTGGGCTCAGCCTGCCACTGAAGCTACCCTTGCGAGGTaGCAGGGACTCCCCGAGGGTGGGCGAGGGACTCCGAGTCCTGCG +
Preference number: 5 (lower is better)
Translates to: TVSWAQPATEATLAR*QGLPEGGRGTPSPA
Trigger: CGCAGGACTCGGAGTCCCTCGCCCACCCTCGGGGAGTCCCTGGCACCTCGCAAGGGTAGCTTCAGTGGCAGGCTGAGCCCAGCTTACAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS GCA 90 bp CTTTGTTCCTTCTGCAGCGAGGCTCGCTCTGCCTCCCGCTCCCCCTaGAGCAGTGCTCTCTCCATCTCGGCCTCTCGGGCTGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LCSFCSEARSASRSP*SSALSISASRAASC
Trigger: GCAGGAGGCAGCCCGAGAGGCCGAGATGGAGAGAGCACTGCTGCAGGGGGAGCGGGAGGCAGAGCGAGCCTCGCTGCAGAAGGAACAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGACTACAGCCTGGGTCTaGCATCCAGGGCCTAGCTGG +
Preference number: 5 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQTTAWV*HPGPSW
Trigger: CCAGCTAGGCCCTGGATGCAAGACCCAGGCTGTAGT...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCACTTCCCTGCTTAGCTaGGGATCTGGGGCAGTCCGG +
Preference number: 5 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFTSLLS*GSGAVR
Trigger: CCGGACTGCCCCAGATCCCAAGCTAAGCAGGGAAGT...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGACCACTGAAGCTACCCTaGCGAGGTGCCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGPLKLP*RGARDS
Trigger: GGAGTCCCTGGCACCTCGCAAGGGTAGCTTCAGTGG...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGCTCCCGGAGCCGCTCTaGGCGCTGCCGACGGTGGTA +
Preference number: 5 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQLPEPL*ALPTVV
Trigger: TACCACCGTCGGCAGCGCCAAGAGCGGCTCCGGGAG...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAGGCGCTCCTTCCTCTaGCTCACACTGCGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: GTSRVAGGRARSPGAELGRRSFL*LTLRSN
Trigger: GTTGCTGCGCAGTGTGAGCAAGAGGAAGGAGCGCCT...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCAGGCGCTCCTTCCTCTaGCTCACACTGCGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFRRSFL*LTLRSN
Trigger: GTTGCTGCGCAGTGTGAGCAAGAGGAAGGAGCGCCT...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAGTGTGGCTGCCAGGTaGCGAGGAAGGCTACTGGTG +
Preference number: 5 (lower is better)
Translates to: GTSRVAGGRARSPGAELGSVAAR*RGRLLV
Trigger: CACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACT...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAGGGCCAGCTGGCGCTaGGTCTCAATGTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: GTSRVAGGRARSPGAELGRASWR*VSMSCS
Trigger: ACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCT...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGAGGGCCAGCTGGCGCTaGGTCTCAATGTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQRASWR*VSMSCS
Trigger: ACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCT...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGCAGCCGCCGCTCCACTaGCTCCCGCCTCCTCCGTTC +
Preference number: 5 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQQPPLH*LPPPPF
Trigger: GAACGGAGGAGGCGGGAGCAAGTGGAGCGGCGGCTG...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 90 bp GCCACCAACTTCTCCTGCAGCTGGTCCACCGCCCTTTGTTCCTTCTaGAGCGAGGCTCGCTCTGCCTCCCGCTCCCCCTGCAGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: ATNFSCSWSTALCSF*SEARSASRSPCSSA
Trigger: AGCACTGCTGCAGGGGGAGCGGGAGGCAGAGCGAGCCTCGCTGCAGAAGGAACAAAGGGCGGTGGACCAGCTGCAGGAGAAGTTGGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS CCA 90 bp GGGAGGCACCTCCAGACTCCTCGCCGCACCTTCCGGAGACTACTATaGCTCCTGCCAAGCCTCTTGAGGGCCTCCTGCCTGCCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: GRHLQTPRRTFRRLL*LLPSLLRASCLPRP
Trigger: TGGCCTTGGCAGGCAGGAGGCCCTCAAGAGGCTTGGCAGGAGCCATAGTAGTCTCCGGAAGGTGCGGCGAGGAGTCTGGAGGTGCCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 90 bp CTGAGGAGGAGGGGAGAGGGCCGCTACGGGTCCTGGGCAGGGGGCTaGCCGCATCACTATCCATCTTGGAGCGGTAAACCTGCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: LRRRGEGRYGSWAGG*PHHYPSWSGKPAAD
Trigger: GTCAGCTGCAGGTTTACCGCTCCAAGATGGATAGTGATGCGGCCAGCCCCCTGCCCAGGACCCGTAGCGGCCCTCTCCCCTCCTCCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
CDS CCA 90 bp AGGAGGAGGAGCCTGAGGAGGAGGGGAGAGGGCCGCTACGGGTCCTaGGCAGGGGGCTGGCCGCATCACTATCCATCTTGGAGCGGTAAA +
Preference number: 5 (lower is better)
Translates to: RRRSLRRRGEGRYGS*AGGWPHHYPSWSGK
Trigger: TTTACCGCTCCAAGATGGATAGTGATGCGGCCAGCCCCCTGCCCAGGACCCGTAGCGGCCCTCTCCCCTCCTCCTCAGGCTCCTCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGTGCCCGGGTTGCAGGTaGTGCTGTGTGGTTCCCATT +
Preference number: 5 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQCPGCR*CCVVPI
Trigger: AATGGGAACCACACAGCACAACCTGCAACCCGGGCA...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGGTGGCAGCAGGCTTCTaGCCTGCAGCTCCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: QCATVPRDKQSGRWQGTEVAAGF*PAAPGS
Trigger: GGAGCCTGGAGCTGCAGGCAAGAAGCCTGCTGCCAC...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGTGGAGTGTGCCGATCTaGTTTCGGGGAGCAGGCACT +
Preference number: 5 (lower is better)
Translates to: GTSRVAGGRARSPGAELGWSVPI*FRGAGT
Trigger: AGTGCCTGCTCCCCGAAACAAGATCGGCACACTCCA...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGCGCAGCAACTCAGCCTaGCTCCGCAGCAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: QCATVPRDKQSGRWQGTERSNSA*LRSSPW
Trigger: CCAAGGGCTGCTGCGGAGCAAGGCTGAGTTGCTGCG...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAAGGCGCTCCTTCCTCTaGCTCACACTGCGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGRRSFL*LTLRSN
Trigger: GTTGCTGCGCAGTGTGAGCAAGAGGAAGGAGCGCCT...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAAGTGTGGCTGCCAGGTaGCGAGGAAGGCTACTGGTG +
Preference number: 5 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGSVAAR*RGRLLV
Trigger: CACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACT...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAAGGGCCAGCTGGCGCTaGGTCTCAATGTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGRASWR*VSMSCS
Trigger: ACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCT...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCCAGCCGCCGCTCCACTaGCTCCCGCCTCCTCCGTTC +
Preference number: 5 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLQPPLH*LPPPPF
Trigger: GAACGGAGGAGGCGGGAGCAAGTGGAGCGGCGGCTG...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS TCA 90 bp CCTGCTGAAAAGGGCCCTGCACCATGCAAGGCATCCCACTGGCACTaGGCCTCTGCCGCCGCCTTCTGCTTCAGCTCCGCCAGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: PAEKGPAPCKASHWH*ASAAAFCFSSASLL
Trigger: GAGGAGACTGGCGGAGCTGAAGCAGAAGGCGGCGGCAGAGGCTCAGTGCCAGTGGGATGCCTTGCATGGTGCAGGGCCCTTTTCAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 90 bp TGCCCACCAGTTGTCGAGAGGGGCTGCTTGTTAGTACCCGCTCTGTaGCTGGGGGCTCACGGAAAGGACTGGGAGGGCGGTCCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: CPPVVERGCLLVPAL*LGAHGKDWEGGPGV
Trigger: CACTCCAGGACCGCCCTCCCAGTCCTTTCCGTGAGCCCCCAGGCACAGAGCGGGTACTAACAAGCAGCCCCTCTCGACAACTGGTGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS GCA 90 bp GCCTCTGCCGCCGCCTTCTGCTTCAGCTCCGCCAGTCTCCTCCGTTaGTCCTCGATCACTTGGTGTCCTGCTGGGTCTTCAGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: ASAAAFCFSSASLLR*SSITWCPAGSSGGR
Trigger: CCTCCCACCTGAAGACCCAGCAGGACACCAAGTGATCGAGGAGCAACGGAGGAGACTGGCGGAGCTGAAGCAGAAGGCGGCGGCAGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128326.8
ENSMUST00000148344.8
CDS CCA 90 bp CGCTGGCGTTCCAGCCTCTCCATCTCCTGCTCCCGGAGCCGCTCTTaGCGCTGCCGACGGTGGTACTCCAGAAGTTCGTCCTCATTGTCG +
Preference number: 5 (lower is better)
Translates to: RWRSSLSISCSRSRS*RCRRWYSRSSSSLS
Trigger: CGACAATGAGGACGAACTTCTGGAGTACCACCGTCGGCAGCGCCAAGAGCGGCTCCGGGAGCAGGAGATGGAGAGGCTGGAACGCCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 90 bp CAGGTCCCCCGTCAGCTCGGCTGTACTCAGCACACAGGTTCAGGATaGTCTCCAGGCGCTGGCGTTCCAGCCTCTCCATCTCCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: QVPRQLGCTQHTGSG*SPGAGVPASPSPAP
Trigger: GGGAGCAGGAGATGGAGAGGCTGGAACGCCAGCGCCTGGAGACCATCCTGAACCTGTGTGCTGAGTACAGCCGAGCTGACGGGGGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCGCGCAGGAAGGTGGATaGACCCAGACACAACATGCA +
Preference number: 5 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFAQEGG*TQTQHA
Trigger: TGCATGTTGTGTCTGGGTCAATCCACCTTCCTGCGC...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGACTGGAGACTGGAACTaGGGGCTGCCAGGAATACTG +
Preference number: 5 (lower is better)
Translates to: GTSRVAGGRARSPGAELGTGDWN*GLPGIL
Trigger: CAGTATTCCTGGCAGCCCCAAGTTCCAGTCTCCAGT...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGAGAGCGTCTGCCTCCTaGTCCCTGTCCTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWRASAS*SLSFWM
Trigger: CATCCAGAAGGACAGGGACAAGGAGGCAGACGCTCT...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAGCTCCGCAGCAGCCCTaGGCCGGCCAGCTCCCGCTC +
Preference number: 5 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGAPQQP*AGQLPL
Trigger: GAGCGGGAGCTGGCCGGCCAAGGGCTGCTGCGGAGC...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGCGCAGCAACTCAGCCTaGCTCCGCAGCAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQRSNSA*LRSSPW
Trigger: CCAAGGGCTGCTGCGGAGCAAGGCTGAGTTGCTGCG...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 90 bp GCCTCTGCCGCCGCCTTCTGCTTCAGCTCCGCCAGTCTCCTCCGTTaGTCCTCGATCACTTGGTGTCCCTTTTGCTGTAGGGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ASAAAFCFSSASLLR*SSITWCPFCCRASW
Trigger: CCAGCTGGCCCTACAGCAAAAGGGACACCAAGTGATCGAGGAGCAACGGAGGAGACTGGCGGAGCTGAAGCAGAAGGCGGCGGCAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000156918.8
CDS CCA 90 bp TGGAGGGGACAACAGGTAGCGCCCGCCGTTAGCCATTGGCGACAATaGGGATGTGGCAGCAGGCTTCTTGCCTGCAGCTCCAGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: WRGQQVAPAVSHWRQ*GCGSRLLACSSRLL
Trigger: GAGGAGCCTGGAGCTGCAGGCAAGAAGCCTGCTGCCACATCCCCATTGTCGCCAATGGCTAACGGCGGGCGCTACCTGTTGTCCCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148929.2
CDS CCA 90 bp CAGCCGGGGACTGTCAGAGGAGCGGGAACCACTTGGGCGAGACTGTaGAGGTTGCAGAGCCAAATGGTAGCTAGAGGAGCGGGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: QPGTVRGAGTTWARL*RLQSQMVARGAGRH
Trigger: GTGCCTGCCCGCTCCTCTAGCTACCATTTGGCTCTGCAACCTCCACAGTCTCGCCCAAGTGGTTCCCGCTCCTCTGACAGTCCCCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 90 bp GGGGAGCAGGCACTGGAGACTGGAACTTGGGGCTGCCAGGAATACTaGCGGGTTGGCTGCGGGCACCGGAAGATGGGTATTCACTCAGGC +
Preference number: 5 (lower is better)
Translates to: GEQALETGTWGCQEY*RVGCGHRKMGIHSG
Trigger: GCCTGAGTGAATACCCATCTTCCGGTGCCCGCAGCCAACCCGCCAGTATTCCTGGCAGCCCCAAGTTCCAGTCTCCAGTGCCTGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGACTACAGCCTGGGTCTaGCATCCAGGGCCTAGCTGG +
Preference number: 5 (lower is better)
Translates to: QCATVPRDKQSGRWQGTETTAWV*HPGPSW
Trigger: CCAGCTAGGCCCTGGATGCAAGACCCAGGCTGTAGT...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGTCAATAGTGCAGGCATaGCCACAAGGGTACAGGGTG +
Preference number: 5 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQSIVQA*PQGYRV
Trigger: CACCCTGTACCCTTGTGGCAATGCCTGCACTATTGA...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAGGAATACTGGCGGGTaGGCTGCGGGCACCGGAAGA +
Preference number: 5 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQRNTGG*AAGTGR
Trigger: TCTTCCGGTGCCCGCAGCCAACCCGCCAGTATTCCT...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGCTCCCGGAGCCGCTCTaGGCGCTGCCGACGGTGGTA +
Preference number: 5 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGLPEPL*ALPTVV
Trigger: TACCACCGTCGGCAGCGCCAAGAGCGGCTCCGGGAG...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCCGCAGCAACTCAGCCTaGCTCCGCAGCAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLRSNSA*LRSSPW
Trigger: CCAAGGGCTGCTGCGGAGCAAGGCTGAGTTGCTGCG...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGAGGCGCTCCTTCCTCTaGCTCACACTGCGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: QCATVPRDKQSGRWQGTERRSFL*LTLRSN
Trigger: GTTGCTGCGCAGTGTGAGCAAGAGGAAGGAGCGCCT...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGAGGCGCTCCTTCCTCTaGCTCACACTGCGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQRRSFL*LTLRSN
Trigger: GTTGCTGCGCAGTGTGAGCAAGAGGAAGGAGCGCCT...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGAGCTTCTCCATCTCTTaGAGGGTGGAGGTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQSFSIS*RVEVVF
Trigger: GAAGACCACCTCCACCCTCAAAGAGATGGAGAAGCT...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034611.15
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGAGGGCCAGCTGGCGCTaGGTCTCAATGTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: QCATVPRDKQSGRWQGTERASWR*VSMSCS
Trigger: ACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCT...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCAGCCGCCGCTCCACTaGCTCCCGCCTCCTCCGTTC +
Preference number: 5 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFQPPLH*LPPPPF
Trigger: GAACGGAGGAGGCGGGAGCAAGTGGAGCGGCGGCTG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCTGCTTTTCCCGGAGCTaGACTTCTTTCTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFCFSRS*TSFSTS
Trigger: GCTGGTGGAGAAAGAAGTCAAGCTCCGGGAAAAGCA...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGTGCTTTTCCCGGAGCTaGACTTCTTTCTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQCFSRS*TSFSTS
Trigger: GCTGGTGGAGAAAGAAGTCAAGCTCCGGGAAAAGCA...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS TCA 90 bp AGGCTGACGGTGCCCGGGTTGCAGGTTGTGCTGTGTGGTTCCCATTaGCCAGGCTCTCCGATTCAGCAGAGCCAGGGTTGTAGGTGGGCC +
Preference number: 5 (lower is better)
Translates to: RLTVPGLQVVLCGSH*PGSPIQQSQGCRWA
Trigger: GGCCCACCTACAACCCTGGCTCTGCTGAATCGGAGAGCCTGGTCAATGGGAACCACACAGCACAACCTGCAACCCGGGCACCGTCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148929.2
CDS TCA 90 bp CACGCTCCCGGCCAGCTGGCAGGTGATGCAGGATGGAATGATGCATaGGTGCAGGGAAGCCTGAAGGGCCTGCTGAAAAGGGCCCTGCAC +
Preference number: 5 (lower is better)
Translates to: HAPGQLAGDAGWNDA*VQGSLKGLLKRALH
Trigger: GTGCAGGGCCCTTTTCAGCAGGCCCTTCAGGCTTCCCTGCACTCATGCATCATTCCATCCTGCATCACCTGCCAGCTGGCCGGGAGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 90 bp GAGAACTGCTTTTCCCGGAGCTTGACTTCTTTCTCCACCAGCTGCTaGCTGCGGGCGCTCTCACTCTGCAGCCGCCGCTCCACTTGCTCC +
Preference number: 5 (lower is better)
Translates to: ENCFSRSLTSFSTSC*LRALSLCSRRSTCS
Trigger: GGAGCAAGTGGAGCGGCGGCTGCAGAGTGAGAGCGCCCGCAGGCAGCAGCTGGTGGAGAAAGAAGTCAAGCTCCGGGAAAAGCAGTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 90 bp TGGGAGAACTGCTTTTCCCGGAGCTTGACTTCTTTCTCCACCAGCTaGTGCCTGCGGGCGCTCTCACTCTGCAGCCGCCGCTCCACTTGC +
Preference number: 5 (lower is better)
Translates to: WENCFSRSLTSFSTS*CLRALSLCSRRSTC
Trigger: GCAAGTGGAGCGGCGGCTGCAGAGTGAGAGCGCCCGCAGGCAGCAGCTGGTGGAGAAAGAAGTCAAGCTCCGGGAAAAGCAGTTCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS CCA 90 bp TGGCTGGCACAGGCTGACGGTGCCCGGGTTGCAGGTTGTGCTGTGTaGTTCCCATTGACCAGGCTCTCCGATTCAGCAGAGCCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: WLAQADGARVAGCAV*FPLTRLSDSAEPGL
Trigger: CAACCCTGGCTCTGCTGAATCGGAGAGCCTGGTCAATGGGAACCACACAGCACAACCTGCAACCCGGGCACCGTCAGCCTGTGCCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148929.2
CDS CCA 90 bp GGTGTTCTCATAGCTGGAGCCCACAGACATGGCACCGGGGCTGGTTaGAGGGGACAACAGGTAGCGCCCGCCGTTAGCCATTGGCGACAA +
Preference number: 5 (lower is better)
Translates to: GVLIAGAHRHGTGAG*RGQQVAPAVSHWRQ
Trigger: TTGTCGCCAATGGCTAACGGCGGGCGCTACCTGTTGTCCCCTCCAACCAGCCCCGGTGCCATGTCTGTGGGCTCCAGCTATGAGAACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148929.2
CDS CCA 90 bp TCCTGGAGTGTGCCGATCTTGTTTCGGGGAGCAGGCACTGGAGACTaGAACTTGGGGCTGCCAGGAATACTGGCGGGTTGGCTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: SWSVPILFRGAGTGD*NLGLPGILAGWLRA
Trigger: TGCCCGCAGCCAACCCGCCAGTATTCCTGGCAGCCCCAAGTTCCAGTCTCCAGTGCCTGCTCCCCGAAACAAGATCGGCACACTCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 90 bp AGGGCGGTCCTGGAGTGTGCCGATCTTGTTTCGGGGAGCAGGCACTaGAGACTGGAACTTGGGGCTGCCAGGAATACTGGCGGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: RAVLECADLVSGSRH*RLELGAARNTGGLA
Trigger: AGCCAACCCGCCAGTATTCCTGGCAGCCCCAAGTTCCAGTCTCCAGTGCCTGCTCCCCGAAACAAGATCGGCACACTCCAGGACCGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 90 bp TGCTTGTTAGTACCCGCTCTGTGCCTGGGGGCTCACGGAAAGGACTaGGAGGGCGGTCCTGGAGTGTGCCGATCTTGTTTCGGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: CLLVPALCLGAHGKD*EGGPGVCRSCFGEQ
Trigger: CTGCTCCCCGAAACAAGATCGGCACACTCCAGGACCGCCCTCCCAGTCCTTTCCGTGAGCCCCCAGGCACAGAGCGGGTACTAACAAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 90 bp GGGGAGGCTGCAGCAAGGCCAGTCCCCAGCCCGGACATCAACTCCTaGTACCACTGCTCTAAGTCTACAGCAGGGAGCAGCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GEAAARPVPSPDINS*YHCSKSTAGSSSFS
Trigger: GGAGAAGCTGCTGCTCCCTGCTGTAGACTTAGAGCAGTGGTACCAGGAGTTGATGTCCGGGCTGGGGACTGGCCTTGCTGCAGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
CDS-3UTR CAA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCAGGAATACTGGCGGGTaGGCTGCGGGCACCGGAAGA +
Preference number: 5 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLRNTGG*AAGTGR
Trigger: TCTTCCGGTGCCCGCAGCCAACCCGCCAGTATTCCT...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGTGGAGTGTGCCGATCTaGTTTCGGGGAGCAGGCACT +
Preference number: 5 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQWSVPI*FRGAGT
Trigger: AGTGCCTGCTCCCCGAAACAAGATCGGCACACTCCA...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGACTTCCCTGCTTAGCTaGGGATCTGGGGCAGTCCGG +
Preference number: 5 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQTSLLS*GSGAVR
Trigger: CCGGACTGCCCCAGATCCCAAGCTAAGCAGGGAAGT...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGCCACTGAAGCTACCCTaGCGAGGTGCCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKPLKLP*RGARDS
Trigger: GGAGTCCCTGGCACCTCGCAAGGGTAGCTTCAGTGG...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCCCACTGAAGCTACCCTaGCGAGGTGCCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLPLKLP*RGARDS
Trigger: GGAGTCCCTGGCACCTCGCAAGGGTAGCTTCAGTGG...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGTGTTTTTCCTCTCCCTaGGAATGGGTACCCGCAAGT +
Preference number: 5 (lower is better)
Translates to: GTSRVAGGRARSPGAELGCFSSP*EWVPAS
Trigger: ACTTGCGGGTACCCATTCCAAGGGAGAGGAAAAACA...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGACTCCCGGAGCCGCTCTaGGCGCTGCCGACGGTGGTA +
Preference number: 5 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGLPEPL*ALPTVV
Trigger: TACCACCGTCGGCAGCGCCAAGAGCGGCTCCGGGAG...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGGGTCCTCAAAGAGCTTaGTCTCAGTCTCTAGAGCGT +
Preference number: 5 (lower is better)
Translates to: GTSRVAGGRARSPGAELGGPQRA*SQSLER
Trigger: ACGCTCTAGAGACTGAGACAAAGCTCTTTGAGGACC...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGGGTCCTCAAAGAGCTTaGTCTCAGTCTCTAGAGCGT +
Preference number: 5 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQGPQRA*SQSLER
Trigger: ACGCTCTAGAGACTGAGACAAAGCTCTTTGAGGACC...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAGGCGCTCCTTCCTCTaGCTCACACTGCGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQRRSFL*LTLRSN
Trigger: GTTGCTGCGCAGTGTGAGCAAGAGGAAGGAGCGCCT...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAGGGCCAGCTGGCGCTaGGTCTCAATGTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQRASWR*VSMSCS
Trigger: ACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCT...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGCAGCCGCCGCTCCACTaGCTCCCGCCTCCTCCGTTC +
Preference number: 5 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQQPPLH*LPPPPF
Trigger: GAACGGAGGAGGCGGGAGCAAGTGGAGCGGCGGCTG...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGATGCTTTTCCCGGAGCTaGACTTCTTTCTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: GQAEWQVAGHGVLGLSWGCFSRS*TSFSTS
Trigger: GCTGGTGGAGAAAGAAGTCAAGCTCCGGGAAAAGCA...TCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAGCTCCGCCCTCTCCTaGTCCCTGTCCTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQSSALS*SLSFWM
Trigger: CATCCAGAAGGACAGGGACAAGGAGAGGGCGGAGCT...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144251.8
CDS GCA 90 bp CCGGAAGATGGGTATTCACTCAGGCTGATAGCCACCACAGGTAACTaGCCACCTAGCCGGGGACTCTCAGTGGTTCTGCGGGCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PEDGYSLRLIATTGN*PPSRGLSVVLRASA
Trigger: GGCTGAGGCCCGCAGAACCACTGAGAGTCCCCGGCTAGGTGGGCAGTTACCTGTGGTGGCTATCAGCCTGAGTGAATACCCATCTTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS GCA 90 bp TCCCTGTCCTTCTGGATGCCTGTCTCCAAGGCCACCAACTTCTCCTaGAGCTGGTCCACCGCCCTTTGTTCCTTCTGCAGCGAGGCTCGC +
Preference number: 5 (lower is better)
Translates to: SLSFWMPVSKATNFS*SWSTALCSFCSEAR
Trigger: GCGAGCCTCGCTGCAGAAGGAACAAAGGGCGGTGGACCAGCTGCAGGAGAAGTTGGTGGCCTTGGAGACAGGCATCCAGAAGGACAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 90 bp CCAGCTGGCGCTTGGTCTCAATGTCCTGCAGTGTGGCTGCCAGGTTaGGAGGAAGGCTACTGGTGCCATTCTGGGCGAGCAGAGCACTCT +
Preference number: 5 (lower is better)
Translates to: PAGAWSQCPAVWLPG*EEGYWCHSGRAEHS
Trigger: AGAGTGCTCTGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS CCA 90 bp GACCAGGCTCTCCGATTCAGCAGAGCCAGGGTTGTAGGTGGGCCCTaGGGCCCGGACCCCTGCTGGAATCATACTTTTCATCCACTTGGC +
Preference number: 5 (lower is better)
Translates to: DQALRFSRARVVGGP*GPDPCWNHTFHPLG
Trigger: GCCAAGTGGATGAAAAGTATGATTCCAGCAGGGGTCCGGGCCCCAGGGCCCACCTACAACCCTGGCTCTGCTGAATCGGAGAGCCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148929.2
CDS CCA 90 bp GGCACTGGAGACTGGAACTTGGGGCTGCCAGGAATACTGGCGGGTTaGCTGCGGGCACCGGAAGATGGGTATTCACTCAGGCTGATAGCC +
Preference number: 5 (lower is better)
Translates to: GTGDWNLGLPGILAG*LRAPEDGYSLRLIA
Trigger: GGCTATCAGCCTGAGTGAATACCCATCTTCCGGTGCCCGCAGCCAACCCGCCAGTATTCCTGGCAGCCCCAAGTTCCAGTCTCCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 90 bp CTCTCCATCTCCTGCTCCCGGAGCCGCTCTTGGCGCTGCCGACGGTaGTACTCCAGAAGTTCGTCCTCATTGTCGCTGATCTCCGTGATG +
Preference number: 5 (lower is better)
Translates to: LSISCSRSRSWRCRR*YSRSSSSLSLISVM
Trigger: CATCACGGAGATCAGCGACAATGAGGACGAACTTCTGGAGTACCACCGTCGGCAGCGCCAAGAGCGGCTCCGGGAGCAGGAGATGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 90 bp TGCAGTGTGGCTGCCAGGTTGCGAGGAAGGCTACTGGTGCCATTCTaGGCGAGCAGAGCACTCTTTGGGGAAGGACTACGGCCCAGGGTA +
Preference number: 5 (lower is better)
Translates to: CSVAARLRGRLLVPF*ASRALFGEGLRPRV
Trigger: TACCCTGGGCCGTAGTCCTTCCCCAAAGAGTGCTCTGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS CCA 90 bp CGGCAGGAGGTAACTCGACCTTTTGCTGTAGGGCCAGCTGGCGCTTaGTCTCAATGTCCTGCAGTGTGGCTGCCAGGTTGCGAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: RQEVTRPFAVGPAGA*SQCPAVWLPGCEEG
Trigger: GCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCAAAAGGTCGAGTTACCTCCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128326.8
ENSMUST00000148344.8
CDS CCA 90 bp AGGGGCTCGGCAGGAGGTAACTCGACCTTTTGCTGTAGGGCCAGCTaGCGCTTGGTCTCAATGTCCTGCAGTGTGGCTGCCAGGTTGCGA +
Preference number: 5 (lower is better)
Translates to: RGSAGGNSTFCCRAS*RLVSMSCSVAARLR
Trigger: TCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCAAAAGGTCGAGTTACCTCCTGCCGAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000128326.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGACTACAGCCTGGGTCTaGCATCCAGGGCCTAGCTGG +
Preference number: 5 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKTTAWV*HPGPSW
Trigger: CCAGCTAGGCCCTGGATGCAAGACCCAGGCTGTAGT...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGTGCCCGGGTTGCAGGTaGTGCTGTGTGGTTCCCATT +
Preference number: 5 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQCPGCR*CCVVPI
Trigger: AATGGGAACCACACAGCACAACCTGCAACCCGGGCA...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGGTGGCAGCAGGCTTCTaGCCTGCAGCTCCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGVAAGF*PAAPGS
Trigger: GGAGCCTGGAGCTGCAGGCAAGAAGCCTGCTGCCAC...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGTGGCACCGGGGCTGGTaGGAGGGGACAACAGGTAGC +
Preference number: 5 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGWHRGW*EGTTGS
Trigger: GCTACCTGTTGTCCCCTCCAACCAGCCCCGGTGCCA...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGACTGGAGACTGGAACTaGGGGCTGCCAGGAATACTG +
Preference number: 5 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQTGDWN*GLPGIL
Trigger: CAGTATTCCTGGCAGCCCCAAGTTCCAGTCTCCAGT...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp GCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGTCCTCAAAGAGCTTaGTCTCAGTCTCTAGAGCGT +
Preference number: 5 (lower is better)
Translates to: ATVPRDKQSGRWQGTESWGPQRA*SQSLER
Trigger: ACGCTCTAGAGACTGAGACAAAGCTCTTTGAGGACC...CCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAGCTCCGCAGCAGCCCTaGGCCGGCCAGCTCCCGCTC +
Preference number: 5 (lower is better)
Translates to: LETYPPFSFPITFGKLKGAPQQP*AGQLPL
Trigger: GAGCGGGAGCTGGCCGGCCAAGGGCTGCTGCGGAGC...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCAGGGCCAGCTGGCGCTaGGTCTCAATGTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLRASWR*VSMSCS
Trigger: ACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCT...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTCAGCCGCCGCTCCACTaGCTCCCGCCTCCTCCGTTC +
Preference number: 5 (lower is better)
Translates to: SHHLWETEGRLPQLRASAQPPLH*LPPPPF
Trigger: GAACGGAGGAGGCGGGAGCAAGTGGAGCGGCGGCTG...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGAGCGTCACGTACTCTTaGAGGGTGGAGGTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: QCATVPRDKQSGRWQGTESVTYS*RVEVVF
Trigger: GAAGACCACCTCCACCCTCAAAGAGTACGTGACGCT...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138356.8
CDS TCA 90 bp AGCTCCTTCACTCGGATCTTCAGCTGTTCTACTCGCCCCAGAACCTaGGCCCGCTCCTCTTCCACAGCCAGCACCTCGCCTTGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: SSFTRIFSCSTRPRT*ARSSSTASTSPWCF
Trigger: GAAGCACCAAGGCGAGGTGCTGGCTGTGGAAGAGGAGCGGGCTCAGGTTCTGGGGCGAGTAGAACAGCTGAAGATCCGAGTGAAGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS TCA 90 bp GGGCCACCATGTAGTACAACCGGTCATGGGTCTTCACACAGAAGGTaGGGGCCGGATTCGGACTCTTGGCTGCGCTGCGCAGGTGGTCAT +
Preference number: 5 (lower is better)
Translates to: GPPCSTTGHGSSHRR*GPDSDSWLRCAGGH
Trigger: ATGACCACCTGCGCAGCGCAGCCAAGAGTCCGAATCCGGCCCTCACCTTCTGTGTGAAGACCCATGACCGGTTGTACTACATGGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000144251.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 90 bp AGCAGTGCTCTCTCCATCTCGGCCTCTCGGGCTGCCTCCTGCAGCTaGTGTTCCAGCTCCTTCACTCGGATCTTCAGCTGTTCTACTCGC +
Preference number: 5 (lower is better)
Translates to: SSALSISASRAASCS*CSSSFTRIFSCSTR
Trigger: GCGAGTAGAACAGCTGAAGATCCGAGTGAAGGAGCTGGAACAGCAGCTGCAGGAGGCAGCCCGAGAGGCCGAGATGGAGAGAGCACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 90 bp CAATGTCCTGCAGTGTGGCTGCCAGGTTGCGAGGAAGGCTACTGGTaGCATTCTGGGCGAGCAGAGCACTCTTTGGGGAAGGACTACGGC +
Preference number: 5 (lower is better)
Translates to: QCPAVWLPGCEEGYW*HSGRAEHSLGKDYG
Trigger: GCCGTAGTCCTTCCCCAAAGAGTGCTCTGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS CCA 90 bp CCCTTTTCTGCCCAGCCGGGGACTGTCAGAGGAGCGGGAACCACTTaGGCGAGACTGTGGAGGTTGCAGAGCCAAATGGTAGCTAGAGGA +
Preference number: 5 (lower is better)
Translates to: PFSAQPGTVRGAGTT*ARLWRLQSQMVARG
Trigger: TCCTCTAGCTACCATTTGGCTCTGCAACCTCCACAGTCTCGCCCAAGTGGTTCCCGCTCCTCTGACAGTCCCCGGCTGGGCAGAAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 90 bp TTTGCTGTAGGGCCAGCTGGCGCTTGGTCTCAATGTCCTGCAGTGTaGCTGCCAGGTTGCGAGGAAGGCTACTGGTGCCATTCTGGGCGA +
Preference number: 5 (lower is better)
Translates to: FAVGPAGAWSQCPAV*LPGCEEGYWCHSGR
Trigger: TCGCCCAGAATGGCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS CCA 90 bp CCTCGATCACTTGGTGTCCCTTTTGCTGTAGGGCCAGCTGGCGCTTaGTCTCAATGTCCTGCAGTGTGGCTGCCAGGTTGCGAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: PRSLGVPFAVGPAGA*SQCPAVWLPGCEEG
Trigger: GCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCAAAAGGGACACCAAGTGATCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGGCGCAGGAAGGTGGATaGACCCAGACACAACATGCA +
Preference number: 5 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQAQEGG*TQTQHA
Trigger: TGCATGTTGTGTCTGGGTCAATCCACCTTCCTGCGC...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CTGGGGTGGGTGGGTGCCGGGACAGAGCCGAGAGCGCAGCTCAGCAGCCTCTTCATACTTTTCATCCACTaGGCTTCGGCTGGATGGTTA +
Preference number: 5 (lower is better)
Translates to: LGWVGAGTEPRAQLSSLFILFIH*ASAGWL
Trigger: TAACCATCCAGCCGAAGCCAAGTGGATGAAAAGTAT...GAAGAGGCTGCTGAGCTGCGCTCTCGGCTCTGTCCCGGCACCCACCCACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCTGCCCGGGTTGCAGGTaGTGCTGTGTGGTTCCCATT +
Preference number: 5 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLCPGCR*CCVVPI
Trigger: AATGGGAACCACACAGCACAACCTGCAACCCGGGCA...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAGTGGCAGCAGGCTTCTaGCCTGCAGCTCCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGVAAGF*PAAPGS
Trigger: GGAGCCTGGAGCTGCAGGCAAGAAGCCTGCTGCCAC...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGTGGCACCGGGGCTGGTaGGAGGGGACAACAGGTAGC +
Preference number: 5 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQWHRGW*EGTTGS
Trigger: GCTACCTGTTGTCCCCTCCAACCAGCCCCGGTGCCA...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGACTGGAGACTGGAACTaGGGGCTGCCAGGAATACTG +
Preference number: 5 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQTGDWN*GLPGIL
Trigger: CAGTATTCCTGGCAGCCCCAAGTTCCAGTCTCCAGT...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCTGGAGTGTGCCGATCTaGTTTCGGGGAGCAGGCACT +
Preference number: 5 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLWSVPI*FRGAGT
Trigger: AGTGCCTGCTCCCCGAAACAAGATCGGCACACTCCA...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp GCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGAACCCAGCTGCTGCATTCCTCTTaGAGATTCTCTTCATCAGAG +
Preference number: 5 (lower is better)
Translates to: AEWQVAGHGVLGLSWGTQLLHSS*RFSSSE
Trigger: CTCTGATGAAGAGAATCTCAAAGAGGAATGCAGCAG...CTGGGTTCCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGTCCTGGGGCTGAGCTGGGGCTGCTGCATTCCTCTTaGAGATTCTCTTCATCAGAG +
Preference number: 5 (lower is better)
Translates to: GTSRVAGGRARSPGAELGLLHSS*RFSSSE
Trigger: CTCTGATGAAGAGAATCTCAAAGAGGAATGCAGCAG...CCCCAGCTCAGCCCCAGGACTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCAGAGCGTCTGCCTCCTaGTCCCTGTCCTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLRASAS*SLSFWM
Trigger: CATCCAGAAGGACAGGGACAAGGAGGCAGACGCTCT...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCCGATCCTTTGCAGCCCCGTGCCCAATGTGCCACTGTCCCCAGGGACAAGCAGTGCTTTTCCCGGAGCTaGACTTCTTTCTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: PDPLQPRAQCATVPRDKQCFSRS*TSFSTS
Trigger: GCTGGTGGAGAAAGAAGTCAAGCTCCGGGAAAAGCA...CTGCTTGTCCCTGGGGACAGTGGCACATTGGGCACGGGGCTGCAAAGGATCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGTTGCTCCTCGATCACTaGGTGTCCTGCTGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQLLLDH*VSCWVF
Trigger: GAAGACCCAGCAGGACACCAAGTGATCGAGGAGCAA...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128326.8
ENSMUST00000148344.8
CDS GCA 90 bp AGCACCTCGCCTTGGTGCTTCGCGCCAGGAGCGTCTTCATGCTCCTaGTGGGTGCTCTCGGTGCTGCTGCATTCCTCTTTGAGATTCTCT +
Preference number: 5 (lower is better)
Translates to: STSPWCFAPGASSCS*WVLSVLLHSSLRFS
Trigger: AGAGAATCTCAAAGAGGAATGCAGCAGCACCGAGAGCACCCAGCAGGAGCATGAAGACGCTCCTGGCGCGAAGCACCAAGGCGAGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 90 bp TCTCAGTCTCTAGAGCGTCTGCCTCCTTGTCCCTGTCCTTCTGGATaGCTGTCTCCAAGGCCACCAACTTCTCCTGCAGCTGGTCCACCG +
Preference number: 5 (lower is better)
Translates to: SQSLERLPPCPCPSG*LSPRPPTSPAAGPP
Trigger: CGGTGGACCAGCTGCAGGAGAAGTTGGTGGCCTTGGAGACAGGCATCCAGAAGGACAGGGACAAGGAGGCAGACGCTCTAGAGACTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 90 bp TGTCCCTTTTGCTGTAGGGCCAGCTGGCGCTTGGTCTCAATGTCCTaGAGTGTGGCTGCCAGGTTGCGAGGAAGGCTACTGGTGCCATTC +
Preference number: 5 (lower is better)
Translates to: CPFCCRASWRLVSMS*SVAARLRGRLLVPF
Trigger: GAATGGCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCAAAAGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS GCA 90 bp TCCGCCAGTCTCCTCCGTTGCTCCTCGATCACTTGGTGTCCCTTTTaGTGTAGGGCCAGCTGGCGCTTGGTCTCAATGTCCTGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: SASLLRCSSITWCPF*CRASWRLVSMSCSV
Trigger: CACACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCAAAAGGGACACCAAGTGATCGAGGAGCAACGGAGGAGACTGGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000156918.8
CDS GCA 90 bp TCGACCTTTTGCTGTAGGGCCAGCTGGCGCTTGGTCTCAATGTCCTaGAGTGTGGCTGCCAGGTTGCGAGGAAGGCTACTGGTGCCATTC +
Preference number: 5 (lower is better)
Translates to: STFCCRASWRLVSMS*SVAARLRGRLLVPF
Trigger: GAATGGCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCAAAAGGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128326.8
ENSMUST00000148344.8
CDS CCA 90 bp CGTTGCTCCTCGATCACTTGGTGTCCCTTTTGCTGTAGGGCCAGCTaGCGCTTGGTCTCAATGTCCTGCAGTGTGGCTGCCAGGTTGCGA +
Preference number: 5 (lower is better)
Translates to: RCSSITWCPFCCRAS*RLVSMSCSVAARLR
Trigger: TCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCAAAAGGGACACCAAGTGATCGAGGAGCAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAAGGAATACTGGCGGGTaGGCTGCGGGCACCGGAAGA +
Preference number: 5 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGRNTGG*AAGTGR
Trigger: TCTTCCGGTGCCCGCAGCCAACCCGCCAGTATTCCT...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGACTTCCCTGCTTAGCTaGGGATCTGGGGCAGTCCGG +
Preference number: 5 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGTSLLS*GSGAVR
Trigger: CCGGACTGCCCCAGATCCCAAGCTAAGCAGGGAAGT...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CAATGTGCCACTGTCCCCAGGGACAAGCAGAGTGGCAGGTGGCAGGGCACGGAGGGTCCTCAAAGAGCTTaGTCTCAGTCTCTAGAGCGT +
Preference number: 5 (lower is better)
Translates to: QCATVPRDKQSGRWQGTEGPQRA*SQSLER
Trigger: ACGCTCTAGAGACTGAGACAAAGCTCTTTGAGGACC...CTCCGTGCCCTGCCACCTGCCACTCTGCTTGTCCCTGGGGACAGTGGCACATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGAGGCGCTCCTTCCTCTaGCTCACACTGCGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGRRSFL*LTLRSN
Trigger: GTTGCTGCGCAGTGTGAGCAAGAGGAAGGAGCGCCT...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGAGTGTGGCTGCCAGGTaGCGAGGAAGGCTACTGGTG +
Preference number: 5 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGSVAAR*RGRLLV
Trigger: CACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACT...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCAGTGTGGCTGCCAGGTaGCGAGGAAGGCTACTGGTG +
Preference number: 5 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFSVAAR*RGRLLV
Trigger: CACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACT...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGTCCATTTCCTCGATCTaGCCCATGTCCAGACCACTG +
Preference number: 5 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQSISSI*PMSRPL
Trigger: CAGTGGTCTGGACATGGGCAAGATCGAGGAAATGGA...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGACAGCCGCCGCTCCACTaGCTCCCGCCTCCTCCGTTC +
Preference number: 5 (lower is better)
Translates to: LETYPPFSFPITFGKLKGQPPLH*LPPPPF
Trigger: GAACGGAGGAGGCGGGAGCAAGTGGAGCGGCGGCTG...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS TCA 90 bp GTCCTTTTCAATAGAGCTCACCAGGGAACTGTGGCTGGCACAGGCTaGCGGTGCCCGGGTTGCAGGTTGTGCTGTGTGGTTCCCATTGAC +
Preference number: 5 (lower is better)
Translates to: VLFNRAHQGTVAGTG*RCPGCRLCCVVPID
Trigger: GTCAATGGGAACCACACAGCACAACCTGCAACCCGGGCACCGTCAGCCTGTGCCAGCCACAGTTCCCTGGTGAGCTCTATTGAAAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148929.2
CDS GCA 90 bp GCGGCTGGAGGGTACGAGTTGCTGCTAACCCATCCGAAAATGTTCTaGCCACCAGTTGTCGAGAGGGGCTGCTTGTTAGTACCCGCTCTG +
Preference number: 5 (lower is better)
Translates to: AAGGYELLLTHPKMF*PPVVERGCLLVPAL
Trigger: CAGAGCGGGTACTAACAAGCAGCCCCTCTCGACAACTGGTGGGCAGAACATTTTCGGATGGGTTAGCAGCAACTCGTACCCTCCAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 90 bp ACCTCGCCTTGGTGCTTCGCGCCAGGAGCGTCTTCATGCTCCTGCTaGGTGCTCTCGGTGCTGCTGCATTCCTCTTTGAGATTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: TSPWCFAPGASSCSC*VLSVLLHSSLRFSS
Trigger: TGAAGAGAATCTCAAAGAGGAATGCAGCAGCACCGAGAGCACCCAGCAGGAGCATGAAGACGCTCCTGGCGCGAAGCACCAAGGCGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS CCA 90 bp TCTCAATGTCCTGCAGTGTGGCTGCCAGGTTGCGAGGAAGGCTACTaGTGCCATTCTGGGCGAGCAGAGCACTCTTTGGGGAAGGACTAC +
Preference number: 5 (lower is better)
Translates to: SQCPAVWLPGCEEGY*CHSGRAEHSLGKDY
Trigger: GTAGTCCTTCCCCAAAGAGTGCTCTGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTAGGAATACTGGCGGGTaGGCTGCGGGCACCGGAAGA +
Preference number: 5 (lower is better)
Translates to: SHHLWETEGRLPQLRASARNTGG*AAGTGR
Trigger: TCTTCCGGTGCCCGCAGCCAACCCGCCAGTATTCCT...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTCCACTGAAGCTACCCTaGCGAGGTGCCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: SHHLWETEGRLPQLRASAPLKLP*RGARDS
Trigger: GGAGTCCCTGGCACCTCGCAAGGGTAGCTTCAGTGG...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCAGAGCGTCTGCCTCCTaGTCCCTGTCCTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFRASAS*SLSFWM
Trigger: CATCCAGAAGGACAGGGACAAGGAGGCAGACGCTCT...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATCGCAGCAACTCAGCCTaGCTCCGCAGCAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHRSNSA*LRSSPW
Trigger: CCAAGGGCTGCTGCGGAGCAAGGCTGAGTTGCTGCG...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAAGTGTGGCTGCCAGGTaGCGAGGAAGGCTACTGGTG +
Preference number: 5 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGSVAAR*RGRLLV
Trigger: CACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACT...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAAGGGCCAGCTGGCGCTaGGTCTCAATGTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGRASWR*VSMSCS
Trigger: ACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCT...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGTCCATTTCCTCGATCTaGCCCATGTCCAGACCACTG +
Preference number: 5 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKSISSI*PMSRPL
Trigger: CAGTGGTCTGGACATGGGCAAGATCGAGGAAATGGA...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS CCA 90 bp ATGATTTCCTGCAGGTCCTTTTCAATAGAGCTCACCAGGGAACTGTaGCTGGCACAGGCTGACGGTGCCCGGGTTGCAGGTTGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: MISCRSFSIELTREL*LAQADGARVAGCAV
Trigger: CACAGCACAACCTGCAACCCGGGCACCGTCAGCCTGTGCCAGCCACAGTTCCCTGGTGAGCTCTATTGAAAAGGACCTGCAGGAAATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148929.2
CDS CCA 90 bp GTCCTCATTGTCGCTGATCTCCGTGATGCTGTTTTTCCTCTCCCTTaGAATGGGTACCCGCAAGTCCCCACTGGAGAGCTTCCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: VLIVADLRDAVFPLP*NGYPQVPTGELPLS
Trigger: GCTCAGCGGAAGCTCTCCAGTGGGGACTTGCGGGTACCCATTCCAAGGGAGAGGAAAAACAGCATCACGGAGATCAGCGACAATGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCGCTGTGTGGTTCCCATaGACCAGGCTCTCCGATTCA +
Preference number: 5 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFAVWFP*TRLSDS
Trigger: TGAATCGGAGAGCCTGGTCAATGGGAACCACACAGC...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGGCTGTGTGGTTCCCATaGACCAGGCTCTCCGATTCA +
Preference number: 5 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGAVWFP*TRLSDS
Trigger: TGAATCGGAGAGCCTGGTCAATGGGAACCACACAGC...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATCTGACGGTGCCCGGGTaGCAGGTTGTGCTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDLTVPG*QVVLCG
Trigger: ACCACACAGCACAACCTGCAACCCGGGCACCGTCAG...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTACTTCCCTGCTTAGCTaGGGATCTGGGGCAGTCCGG +
Preference number: 5 (lower is better)
Translates to: SHHLWETEGRLPQLRASATSLLS*GSGAVR
Trigger: CCGGACTGCCCCAGATCCCAAGCTAAGCAGGGAAGT...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATCCACTGAAGCTACCCTaGCGAGGTGCCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHPLKLP*RGARDS
Trigger: GGAGTCCCTGGCACCTCGCAAGGGTAGCTTCAGTGG...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp GGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGAAGTGTTTTTCCTCTCCCTaGGAATGGGTACCCGCAAGT +
Preference number: 5 (lower is better)
Translates to: GLGWRDDGTYPHVAHSQKCFSSP*EWVPAS
Trigger: ACTTGCGGGTACCCATTCCAAGGGAGAGGAAAAACA...CTTCTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGAGAGCGTCTGCCTCCTaGTCCCTGTCCTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQRASAS*SLSFWM
Trigger: CATCCAGAAGGACAGGGACAAGGAGGCAGACGCTCT...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CACCATGTGACATGCCCCCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCGGTCCTCAAAGAGCTTaGTCTCAGTCTCTAGAGCGT +
Preference number: 5 (lower is better)
Translates to: HHVTCPQAWVGEMMARTLGPQRA*SQSLER
Trigger: ACGCTCTAGAGACTGAGACAAAGCTCTTTGAGGACC...GAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGGGGGCATGTCACATGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGACGCAGCAACTCAGCCTaGCTCCGCAGCAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: LETYPPFSFPITFGKLKGRSNSA*LRSSPW
Trigger: CCAAGGGCTGCTGCGGAGCAAGGCTGAGTTGCTGCG...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTAGTGTGGCTGCCAGGTaGCGAGGAAGGCTACTGGTG +
Preference number: 5 (lower is better)
Translates to: SHHLWETEGRLPQLRASASVAAR*RGRLLV
Trigger: CACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACT...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS TCA 90 bp TCCATCTCCCGCTCCCTGGACTCCATGAGCCGGCTCTTCTCTGCGTaGGCTTCCTTTAGCATCTTCTCCATTTCCTCGATCTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: SISRSLDSMSRLFSA*ASFSIFSISSILPM
Trigger: CATGGGCAAGATCGAGGAAATGGAGAAGATGCTAAAGGAAGCTCACGCAGAGAAGAGCCGGCTCATGGAGTCCAGGGAGCGGGAGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS TCA 90 bp CCAGTCAGCCTCACCCTGGACTCCATGAGCCGGCTCTTCTCTGCGTaGGCTTCCTTTAGCATCTTCTCCATTTCCTCGATCTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: PVSLTLDSMSRLFSA*ASFSIFSISSILPM
Trigger: CATGGGCAAGATCGAGGAAATGGAGAAGATGCTAAAGGAAGCTCACGCAGAGAAGAGCCGGCTCATGGAGTCCAGGGTGAGGCTGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000123310.8
ENSMUST00000138356.8
CDS-3UTR CAA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATACTACAGCCTGGGTCTaGCATCCAGGGCCTAGCTGG +
Preference number: 5 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHTTAWV*HPGPSW
Trigger: CCAGCTAGGCCCTGGATGCAAGACCCAGGCTGTAGT...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTCAATAGTGCAGGCATaGCCACAAGGGTACAGGGTG +
Preference number: 5 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFSIVQA*PQGYRV
Trigger: CACCCTGTACCCTTGTGGCAATGCCTGCACTATTGA...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAGCGCAGGAAGGTGGATaGACCCAGACACAACATGCA +
Preference number: 5 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGAQEGG*TQTQHA
Trigger: TGCATGTTGTGTCTGGGTCAATCCACCTTCCTGCGC...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAGCTGTGTGGTTCCCATaGACCAGGCTCTCCGATTCA +
Preference number: 5 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGAVWFP*TRLSDS
Trigger: TGAATCGGAGAGCCTGGTCAATGGGAACCACACAGC...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTTGCCCGGGTTGCAGGTaGTGCTGTGTGGTTCCCATT +
Preference number: 5 (lower is better)
Translates to: SHHLWETEGRLPQLRASACPGCR*CCVVPI
Trigger: AATGGGAACCACACAGCACAACCTGCAACCCGGGCA...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGACTGACGGTGCCCGGGTaGCAGGTTGTGCTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: LETYPPFSFPITFGKLKGLTVPG*QVVLCG
Trigger: ACCACACAGCACAACCTGCAACCCGGGCACCGTCAG...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAACTGGAGACTGGAACTaGGGGCTGCCAGGAATACTG +
Preference number: 5 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGTGDWN*GLPGIL
Trigger: CAGTATTCCTGGCAGCCCCAAGTTCCAGTCTCCAGT...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CCAGGCCTGGGTTGGAGAGATGATGGCACGTACCCTCATGTGGCCCACAGCCAGCTGCTGCATTCCTCTTaGAGATTCTCTTCATCAGAG +
Preference number: 5 (lower is better)
Translates to: PGLGWRDDGTYPHVAHSQLLHSS*RFSSSE
Trigger: CTCTGATGAAGAGAATCTCAAAGAGGAATGCAGCAG...CTGGCTGTGGGCCACATGAGGGTACGTGCCATCATCTCTCCAACCCAGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCAGCTTCTCCATCTCTTaGAGGGTGGAGGTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFSFSIS*RVEVVF
Trigger: GAAGACCACCTCCACCCTCAAAGAGATGGAGAAGCT...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034611.15
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATAGTGTGGCTGCCAGGTaGCGAGGAAGGCTACTGGTG +
Preference number: 5 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHSVAAR*RGRLLV
Trigger: CACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACT...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATAGTGTGGCTGCCAGGTaGCGAGGAAGGCTACTGGTG +
Preference number: 5 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDSVAAR*RGRLLV
Trigger: CACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACT...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATAGGGCCAGCTGGCGCTaGGTCTCAATGTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDRASWR*VSMSCS
Trigger: ACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCT...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTCCATTTCCTCGATCTaGCCCATGTCCAGACCACTG +
Preference number: 5 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFSISSI*PMSRPL
Trigger: CAGTGGTCTGGACATGGGCAAGATCGAGGAAATGGA...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGTGCTTTTCCCGGAGCTaGACTTCTTTCTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGCFSRS*TSFSTS
Trigger: GCTGGTGGAGAAAGAAGTCAAGCTCCGGGAAAAGCA...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGTTGCTCCTCGATCACTaGGTGTCCTGCTGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQLLLDH*VSCWVF
Trigger: GAAGACCCAGCAGGACACCAAGTGATCGAGGAGCAA...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128326.8
ENSMUST00000148344.8
CDS GCA 90 bp TCTCTGCGTGAGCTTCCTTTAGCATCTTCTCCATTTCCTCGATCTTaGCCATGTCCAGACCACTGGCGCTGGACATGTTGTCCGGGGAAC +
Preference number: 5 (lower is better)
Translates to: SLRELPLASSPFPRS*PCPDHWRWTCCPGN
Trigger: GTTCCCCGGACAACATGTCCAGCGCCAGTGGTCTGGACATGGGCAAGATCGAGGAAATGGAGAAGATGCTAAAGGAAGCTCACGCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS CCA 90 bp CACACCTTGCTGCTAAGCACCACATGTAGGCAGGTGTCCACCCCGTaGCCTGATGACTCTATGTGGGTCTTCAGATCAAAGTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: HTLLLSTTCRQVSTP*PDDSMWVFRSKSSF
Trigger: GAAGGAGGACTTTGATCTGAAGACCCACATAGAGTCATCAGGCCACGGGGTGGACACCTGCCTACATGTGGTGCTTAGCAGCAAGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGTCAATAGTGCAGGCATaGCCACAAGGGTACAGGGTG +
Preference number: 5 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQSIVQA*PQGYRV
Trigger: CACCCTGTACCCTTGTGGCAATGCCTGCACTATTGA...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGTGTTTTTCCTCTCCCTaGGAATGGGTACCCGCAAGT +
Preference number: 5 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGCFSSP*EWVPAS
Trigger: ACTTGCGGGTACCCATTCCAAGGGAGAGGAAAAACA...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGTTTTTCCTCTCCCTaGGAATGGGTACCCGCAAGT +
Preference number: 5 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFCFSSP*EWVPAS
Trigger: ACTTGCGGGTACCCATTCCAAGGGAGAGGAAAAACA...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATAGAGCGTCTGCCTCCTaGTCCCTGTCCTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDRASAS*SLSFWM
Trigger: CATCCAGAAGGACAGGGACAAGGAGGCAGACGCTCT...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATAGAGCGTCTGCCTCCTaGTCCCTGTCCTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHRASAS*SLSFWM
Trigger: CATCCAGAAGGACAGGGACAAGGAGGCAGACGCTCT...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCGGTCCTCAAAGAGCTTaGTCTCAGTCTCTAGAGCGT +
Preference number: 5 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFGPQRA*SQSLER
Trigger: ACGCTCTAGAGACTGAGACAAAGCTCTTTGAGGACC...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGAAGCTTCTCCATCTCTTaGAGGGTGGAGGTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGSFSIS*RVEVVF
Trigger: GAAGACCACCTCCACCCTCAAAGAGATGGAGAAGCT...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034611.15
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGATCCATTTCCTCGATCTaGCCCATGTCCAGACCACTG +
Preference number: 5 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGSISSI*PMSRPL
Trigger: CAGTGGTCTGGACATGGGCAAGATCGAGGAAATGGA...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGTCCATTTCCTCGATCTaGCCCATGTCCAGACCACTG +
Preference number: 5 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQSISSI*PMSRPL
Trigger: CAGTGGTCTGGACATGGGCAAGATCGAGGAAATGGA...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGTGCTTTTCCCGGAGCTaGACTTCTTTCTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQCFSRS*TSFSTS
Trigger: GCTGGTGGAGAAAGAAGTCAAGCTCCGGGAAAAGCA...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 90 bp ATCAAAGTCCTCCTTCCGGTTGGGAAGGTAACGTGTAAGAGGCCGTaGCTGGGAGAACTGCTTTTCCCGGAGCTTGACTTCTTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: IKVLLPVGKVTCKRP*LGELLFPELDFFLH
Trigger: GTGGAGAAAGAAGTCAAGCTCCGGGAAAAGCAGTTCTCCCAGGCACGGCCTCTTACACGTTACCTTCCCAACCGGAAGGAGGACTTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTCTGCACCTTCAGTCCTaGACCCGTCTCAATCAGATC +
Preference number: 5 (lower is better)
Translates to: SHHLWETEGRLPQLRASALHLQS*TRLNQI
Trigger: GATCTGATTGAGACGGGTCAAGGACTGAAGGTGCAG...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATGCTGTGTGGTTCCCATaGACCAGGCTCTCCGATTCA +
Preference number: 5 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDAVWFP*TRLSDS
Trigger: TGAATCGGAGAGCCTGGTCAATGGGAACCACACAGC...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGATGGAGTGTGCCGATCTaGTTTCGGGGAGCAGGCACT +
Preference number: 5 (lower is better)
Translates to: LETYPPFSFPITFGKLKGWSVPI*FRGAGT
Trigger: AGTGCCTGCTCCCCGAAACAAGATCGGCACACTCCA...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGTGTTTTTCCTCTCCCTaGGAATGGGTACCCGCAAGT +
Preference number: 5 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQCFSSP*EWVPAS
Trigger: ACTTGCGGGTACCCATTCCAAGGGAGAGGAAAAACA...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS-3UTR CAA 90 bp CCTCTGGTCTTGGATCCCAGGACATCATCCCTTCTGGCTCTAAGCAAGGCACAGGGTCCTCAAAGAGCTTaGTCTCAGTCTCTAGAGCGT +
Preference number: 5 (lower is better)
Translates to: PLVLDPRTSSLLALSKAQGPQRA*SQSLER
Trigger: ACGCTCTAGAGACTGAGACAAAGCTCTTTGAGGACC...CTGTGCCTTGCTTAGAGCCAGAAGGGATGATGTCCTGGGATCCAAGACCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTTCCATTTCCTCGATCTaGCCCATGTCCAGACCACTG +
Preference number: 5 (lower is better)
Translates to: SHHLWETEGRLPQLRASASISSI*PMSRPL
Trigger: CAGTGGTCTGGACATGGGCAAGATCGAGGAAATGGA...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTTGCTTTTCCCGGAGCTaGACTTCTTTCTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: SHHLWETEGRLPQLRASACFSRS*TSFSTS
Trigger: GCTGGTGGAGAAAGAAGTCAAGCTCCGGGAAAAGCA...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS CCA 90 bp CCGGACCCCTGCTGGAATCATACTTTTCATCCACTTGGCTTCGGCTaGATGGTTAAAGCGCAGGAAGGTGGATTGACCCAGACACAACAT +
Preference number: 5 (lower is better)
Translates to: PDPCWNHTFHPLGFG*MVKAQEGGLTQTQH
Trigger: ATGTTGTGTCTGGGTCAATCCACCTTCCTGCGCTTTAACCATCCAGCCGAAGCCAAGTGGATGAAAAGTATGATTCCAGCAGGGGTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148929.2
CDS-3UTR CAA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGAGCGCAGGAAGGTGGATaGACCCAGACACAACATGCA +
Preference number: 5 (lower is better)
Translates to: LETYPPFSFPITFGKLKGAQEGG*TQTQHA
Trigger: TGCATGTTGTGTCTGGGTCAATCCACCTTCCTGCGC...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CCCCAACTCAGGCTTCTTTGCAGGCACTCTGAGCTACCCTTGTTCCTCACTGGGATACTTTTCATCCACTaGGCTTCGGCTGGATGGTTA +
Preference number: 5 (lower is better)
Translates to: PQLRLLCRHSELPLFLTGILFIH*ASAGWL
Trigger: TAACCATCCAGCCGAAGCCAAGTGGATGAAAAGTAT...CCCAGTGAGGAACAAGGGTAGCTCAGAGTGCCTGCAAAGAAGCCTGAGTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp CTCCCCTCAGTGATGCTGTCCCTCTGGTCTTGGATCCCAGGACATCATCCCTTCCTGCTGCATTCCTCTTaGAGATTCTCTTCATCAGAG +
Preference number: 5 (lower is better)
Translates to: LPSVMLSLWSWIPGHHPFLLHSS*RFSSSE
Trigger: CTCTGATGAAGAGAATCTCAAAGAGGAATGCAGCAG...GAAGGGATGATGTCCTGGGATCCAAGACCAGAGGGACAGCATCACTGAGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp AAATACTGCAAAACACCCAACCAGGCCCAGCAACTAAGGGCCCAGTGCTGGGGAATACTTTTCATCCACTaGGCTTCGGCTGGATGGTTA +
Preference number: 5 (lower is better)
Translates to: KYCKTPNQAQQLRAQCWGILFIH*ASAGWL
Trigger: TAACCATCCAGCCGAAGCCAAGTGGATGAAAAGTAT...TCCCCAGCACTGGGCCCTTAGTTGCTGGGCCTGGTTGGGTGTTTTGCAGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS-3UTR CAA 90 bp TTGAGGTCTCTGGTCCTTGAGCTGAGTAGTGACAAGTGGGAGGTGGGAGGAGGACTGCTGCATTCCTCTTaGAGATTCTCTTCATCAGAG +
Preference number: 5 (lower is better)
Translates to: LRSLVLELSSDKWEVGGGLLHSS*RFSSSE
Trigger: CTCTGATGAAGAGAATCTCAAAGAGGAATGCAGCAG...TCCTCCTCCCACCTCCCACTTGTCACTACTCAGCTCAAGGACCAGAGACCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CTCTGCTGGCTCTTTAGGGACTGGAGCTCAATTCCCAAGCACCAAACTCCTCATGGTCCTCAAAGAGCTTaGTCTCAGTCTCTAGAGCGT +
Preference number: 5 (lower is better)
Translates to: LCWLFRDWSSIPKHQTPHGPQRA*SQSLER
Trigger: ACGCTCTAGAGACTGAGACAAAGCTCTTTGAGGACC...ATGAGGAGTTTGGTGCTTGGGAATTGAGCTCCAGTCCCTAAAGAGCCAGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp CTGGAGACTTATCCTCCGTTCTCCTTTCCCATCACCTTTGGGAAACTGAAGGGATCCATTTCCTCGATCTaGCCCATGTCCAGACCACTG +
Preference number: 5 (lower is better)
Translates to: LETYPPFSFPITFGKLKGSISSI*PMSRPL
Trigger: CAGTGGTCTGGACATGGGCAAGATCGAGGAAATGGA...TCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGGAGGATAAGTCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp TCCCATCACCTTTGGGAAACTGAAGGGAGATTACCACAGCTCAGGGCCTCTGCTCTGCTGCATTCCTCTTaGAGATTCTCTTCATCAGAG +
Preference number: 5 (lower is better)
Translates to: SHHLWETEGRLPQLRASALLHSS*RFSSSE
Trigger: CTCTGATGAAGAGAATCTCAAAGAGGAATGCAGCAG...AGCAGAGGCCCTGAGCTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS-3UTR CAA 90 bp GCAGTGGGCAAAGCCACAGAGTGGCCATGGCAATTAGTGTGTAACCATGGTGATCTGCTGCATTCCTCTTaGAGATTCTCTTCATCAGAG +
Preference number: 5 (lower is better)
Translates to: AVGKATEWPWQLVCNHGDLLHSS*RFSSSE
Trigger: CTCTGATGAAGAGAATCTCAAAGAGGAATGCAGCAG...ATCACCATGGTTACACACTAATTGCCATGGCCACTCTGTGGCTTTGCCCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 72 bp TGGGCTCAGCCTGCCACTGAAGCTACCCTTGCGAGGTaGCAGGGACTCCCCGAGGGTGGGCGAGGGACTCCG +
Preference number: 6 (lower is better)
Translates to: WAQPATEATLAR*QGLPEGGRGTP
Trigger: CGGAGTCCCTCGCCCACCCTCGGGGAGTCCCTGGCACCTCGCAAGGGTAGCTTCAGTGGCAGGCTGAGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CAA 90 bp CCTCGCCGCACCTTCCGGAGACTACTATGGCTCCTGCCAAGCCTCTaGAGGGCCTCCTGCCTGCCAAGGCCAGCGCTGCCGTGGCCTCTC +
Preference number: 6 (lower is better)
Translates to: PRRTFRRLLWLLPSL*RASCLPRPALPWPL
Trigger: GAGAGGCCACGGCAGCGCTGGCCTTGGCAGGCAGGAGGCCCTCAAGAGGCTTGGCAGGAGCCATAGTAGTCTCCGGAAGGTGCGGCGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS GCA 72 bp GGGACTCCCCGAGGGTGGGCGAGGGACTCCGAGTCCTaGGACCCCGTGCTCCTAGAGTCAGGGAGAAGTCCT +
Preference number: 6 (lower is better)
Translates to: GTPRGWARDSES*DPVLLESGRSP
Trigger: AGGACTTCTCCCTGACTCTAGGAGCACGGGGTCGCAGGACTCGGAGTCCCTCGCCCACCCTCGGGGAGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 72 bp AGCCTGAGGAGGAGGGGAGAGGGCCGCTACGGGTCCTaGGCAGGGGGCTGGCCGCATCACTATCCATCTTGG +
Preference number: 6 (lower is better)
Translates to: SLRRRGEGRYGS*AGGWPHHYPSW
Trigger: CCAAGATGGATAGTGATGCGGCCAGCCCCCTGCCCAGGACCCGTAGCGGCCCTCTCCCCTCCTCCTCAGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS TCA 72 bp AAGGGCCCTGCACCATGCAAGGCATCCCACTGGCACTaGGCCTCTGCCGCCGCCTTCTGCTTCAGCTCCGCC +
Preference number: 6 (lower is better)
Translates to: KGPAPCKASHWH*ASAAAFCFSSA
Trigger: GGCGGAGCTGAAGCAGAAGGCGGCGGCAGAGGCTCAGTGCCAGTGGGATGCCTTGCATGGTGCAGGGCCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 72 bp TTCGGGGAGCAGGCACTGGAGACTGGAACTTGGGGCTaGCAGGAATACTGGCGGGTTGGCTGCGGGCACCGG +
Preference number: 6 (lower is better)
Translates to: FGEQALETGTWG*QEYWRVGCGHR
Trigger: CCGGTGCCCGCAGCCAACCCGCCAGTATTCCTGGCAGCCCCAAGTTCCAGTCTCCAGTGCCTGCTCCCCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS GCA 72 bp GCCCGCTCCTCTTCCACAGCCAGCACCTCGCCTTGGTaGTTCGCGCCAGGAGCGTCTTCATGCTCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: ARSSSTASTSPW*FAPGASSCSCW
Trigger: CCAGCAGGAGCATGAAGACGCTCCTGGCGCGAAGCACCAAGGCGAGGTGCTGGCTGTGGAAGAGGAGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 72 bp TTCTCCTGCAGCTGGTCCACCGCCCTTTGTTCCTTCTaGAGCGAGGCTCGCTCTGCCTCCCGCTCCCCCTGC +
Preference number: 6 (lower is better)
Translates to: FSCSWSTALCSF*SEARSASRSPC
Trigger: GCAGGGGGAGCGGGAGGCAGAGCGAGCCTCGCTGCAGAAGGAACAAAGGGCGGTGGACCAGCTGCAGGAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS CAA 90 bp CCCCAGAACCTGAGCCCGCTCCTCTTCCACAGCCAGCACCTCGCCTaGGTGCTTCGCGCCAGGAGCGTCTTCATGCTCCTGCTGGGTGCT +
Preference number: 6 (lower is better)
Translates to: PQNLSPLLFHSQHLA*VLRARSVFMLLLGA
Trigger: AGCACCCAGCAGGAGCATGAAGACGCTCCTGGCGCGAAGCACCAAGGCGAGGTGCTGGCTGTGGAAGAGGAGCGGGCTCAGGTTCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS CCA 72 bp CCTGGGGGCTCACGGAAAGGACTGGGAGGGCGGTCCTaGAGTGTGCCGATCTTGTTTCGGGGAGCAGGCACT +
Preference number: 6 (lower is better)
Translates to: PGGSRKGLGGRS*SVPILFRGAGT
Trigger: AGTGCCTGCTCCCCGAAACAAGATCGGCACACTCCAGGACCGCCCTCCCAGTCCTTTCCGTGAGCCCCCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 72 bp AGGGGAGAGGGCCGCTACGGGTCCTGGGCAGGGGGCTaGCCGCATCACTATCCATCTTGGAGCGGTAAACCT +
Preference number: 6 (lower is better)
Translates to: RGEGRYGSWAGG*PHHYPSWSGKP
Trigger: AGGTTTACCGCTCCAAGATGGATAGTGATGCGGCCAGCCCCCTGCCCAGGACCCGTAGCGGCCCTCTCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS CAA 72 bp CTGAGCCCGCTCCTCTTCCACAGCCAGCACCTCGCCTaGGTGCTTCGCGCCAGGAGCGTCTTCATGCTCCTG +
Preference number: 6 (lower is better)
Translates to: LSPLLFHSQHLA*VLRARSVFMLL
Trigger: CAGGAGCATGAAGACGCTCCTGGCGCGAAGCACCAAGGCGAGGTGCTGGCTGTGGAAGAGGAGCGGGCTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS CAA 90 bp GCGCTGGCGTTCCAGCCTCTCCATCTCCTGCTCCCGGAGCCGCTCTaGGCGCTGCCGACGGTGGTACTCCAGAAGTTCGTCCTCATTGTC +
Preference number: 6 (lower is better)
Translates to: ALAFQPLHLLLPEPL*ALPTVVLQKFVLIV
Trigger: GACAATGAGGACGAACTTCTGGAGTACCACCGTCGGCAGCGCCAAGAGCGGCTCCGGGAGCAGGAGATGGAGAGGCTGGAACGCCAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS GCA 72 bp TTTTCCCGGAGCTTGACTTCTTTCTCCACCAGCTGCTaGCTGCGGGCGCTCTCACTCTGCAGCCGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: FSRSLTSFSTSC*LRALSLCSRRS
Trigger: GGAGCGGCGGCTGCAGAGTGAGAGCGCCCGCAGGCAGCAGCTGGTGGAGAAAGAAGTCAAGCTCCGGGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 72 bp CAGTCTCCTCCGTTGCTCCTCGATCACTTGGTGTCCTaGTGGGTCTTCAGGTGGGAGGGGCTCGGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: QSPPLLLDHLVS*WVFRWEGLGRR
Trigger: CCTCCTGCCGAGCCCCTCCCACCTGAAGACCCAGCAGGACACCAAGTGATCGAGGAGCAACGGAGGAGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128326.8
ENSMUST00000148344.8
CDS CCA 72 bp GTACCCGCTCTGTGCCTGGGGGCTCACGGAAAGGACTaGGAGGGCGGTCCTGGAGTGTGCCGATCTTGTTTC +
Preference number: 6 (lower is better)
Translates to: VPALCLGAHGKD*EGGPGVCRSCF
Trigger: GAAACAAGATCGGCACACTCCAGGACCGCCCTCCCAGTCCTTTCCGTGAGCCCCCAGGCACAGAGCGGGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 72 bp TCCTCTCCCTTGGAATGGGTACCCGCAAGTCCCCACTaGAGAGCTTCCGCTGAGCACGGGGGCTCTGACGAG +
Preference number: 6 (lower is better)
Translates to: SSPLEWVPASPH*RASAEHGGSDE
Trigger: CTCGTCAGAGCCCCCGTGCTCAGCGGAAGCTCTCCAGTGGGGACTTGCGGGTACCCATTCCAAGGGAGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 72 bp CTCCAGACTCCTCGCCGCACCTTCCGGAGACTACTATaGCTCCTGCCAAGCCTCTTGAGGGCCTCCTGCCTG +
Preference number: 6 (lower is better)
Translates to: LQTPRRTFRRLL*LLPSLLRASCL
Trigger: CAGGCAGGAGGCCCTCAAGAGGCTTGGCAGGAGCCATAGTAGTCTCCGGAAGGTGCGGCGAGGAGTCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CAA 90 bp CCCTCCGGCCCAGGCGGGGACTCTCAGGCGGCTGGAGGGTACGAGTaGCTGCTAACCCATCCGAAAATGTTCTGCCCACCAGTTGTCGAG +
Preference number: 6 (lower is better)
Translates to: PSGPGGDSQAAGGYE*LLTHPKMFCPPVVE
Trigger: CTCGACAACTGGTGGGCAGAACATTTTCGGATGGGTTAGCAGCAACTCGTACCCTCCAGCCGCCTGAGAGTCCCCGCCTGGGCCGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CAA 90 bp GCCAGCTGGCGCTTGGTCTCAATGTCCTGCAGTGTGGCTGCCAGGTaGCGAGGAAGGCTACTGGTGCCATTCTGGGCGAGCAGAGCACTC +
Preference number: 6 (lower is better)
Translates to: ASWRLVSMSCSVAAR*RGRLLVPFWASRAL
Trigger: GAGTGCTCTGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS TCA 72 bp GGAGAGCTTCCGCTGAGCACGGGGGCTCTGACGAGGTaGAGCCCCAGTAAGAGAGCCCAGACTGTAAGCTGG +
Preference number: 6 (lower is better)
Translates to: GELPLSTGALTR*SPSKRAQTVSW
Trigger: CCAGCTTACAGTCTGGGCTCTCTTACTGGGGCTTCACCTCGTCAGAGCCCCCGTGCTCAGCGGAAGCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS GCA 72 bp GCTCACGGAAAGGACTGGGAGGGCGGTCCTGGAGTGTaGCGATCTTGTTTCGGGGAGCAGGCACTGGAGACT +
Preference number: 6 (lower is better)
Translates to: AHGKDWEGGPGV*RSCFGEQALET
Trigger: AGTCTCCAGTGCCTGCTCCCCGAAACAAGATCGGCACACTCCAGGACCGCCCTCCCAGTCCTTTCCGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS GCA 72 bp CTCTCCATCTCCTGCTCCCGGAGCCGCTCTTGGCGCTaGCGACGGTGGTACTCCAGAAGTTCGTCCTCATTG +
Preference number: 6 (lower is better)
Translates to: LSISCSRSRSWR*RRWYSRSSSSL
Trigger: CAATGAGGACGAACTTCTGGAGTACCACCGTCGGCAGCGCCAAGAGCGGCTCCGGGAGCAGGAGATGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 72 bp CAACAGGTAGCGCCCGCCGTTAGCCATTGGCGACAATaGGGATGTGGCAGCAGGCTTCTTGCCTGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: QQVAPAVSHWRQ*GCGSRLLACSS
Trigger: GGAGCTGCAGGCAAGAAGCCTGCTGCCACATCCCCATTGTCGCCAATGGCTAACGGCGGGCGCTACCTGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148929.2
CDS CCA 72 bp GGCACAGAGGGTCCTGGCTCCTGCCCACTTGGTGAATaGCTAGCACAGCTTCCGCTGCTGGCTGGTGAGGAA +
Preference number: 6 (lower is better)
Translates to: GTEGPGSCPLGE*LAQLPLLAGEE
Trigger: TTCCTCACCAGCCAGCAGCGGAAGCTGTGCTAGCCATTCACCAAGTGGGCAGGAGCCAGGACCCTCTGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000148929.2
CDS CCA 72 bp GCCCAGCCGGGGACTGTCAGAGGAGCGGGAACCACTTaGGCGAGACTGTGGAGGTTGCAGAGCCAAATGGTA +
Preference number: 6 (lower is better)
Translates to: AQPGTVRGAGTT*ARLWRLQSQMV
Trigger: TACCATTTGGCTCTGCAACCTCCACAGTCTCGCCCAAGTGGTTCCCGCTCCTCTGACAGTCCCCGGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 72 bp GGCTGGCAGTGGGGACAGAGCCCTTCGAGACAGAGATaGACTCAACGGGGGCAGTTCCCGCATACTGTCCAG +
Preference number: 6 (lower is better)
Translates to: GWQWGQSPSRQR*TQRGQFPHTVQ
Trigger: CTGGACAGTATGCGGGAACTGCCCCCGTTGAGTCCATCTCTGTCTCGAAGGGCTCTGTCCCCACTGCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 72 bp TCCTGCTCCCGGAGCCGCTCTTGGCGCTGCCGACGGTaGTACTCCAGAAGTTCGTCCTCATTGTCGCTGATC +
Preference number: 6 (lower is better)
Translates to: SCSRSRSWRCRR*YSRSSSSLSLI
Trigger: GATCAGCGACAATGAGGACGAACTTCTGGAGTACCACCGTCGGCAGCGCCAAGAGCGGCTCCGGGAGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 72 bp CCTGCAGTGTGGCTGCCAGGTTGCGAGGAAGGCTACTaGTGCCATTCTGGGCGAGCAGAGCACTCTTTGGGG +
Preference number: 6 (lower is better)
Translates to: PAVWLPGCEEGY*CHSGRAEHSLG
Trigger: CCCCAAAGAGTGCTCTGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS CCA 72 bp GGGCCAGCTGGCGCTTGGTCTCAATGTCCTGCAGTGTaGCTGCCAGGTTGCGAGGAAGGCTACTGGTGCCAT +
Preference number: 6 (lower is better)
Translates to: GPAGAWSQCPAV*LPGCEEGYWCH
Trigger: ATGGCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS CAA 90 bp AGCCGGGTGGGCTGCCGAACAGGGAGCCCATCAATAGTGCAGGCATaGCCACAAGGGTACAGGGTGAGAGTGCCCCGCAGATTCTCGATG +
Preference number: 6 (lower is better)
Translates to: SRVGCRTGSPSIVQA*PQGYRVRVPRRFSM
Trigger: CATCGAGAATCTGCGGGGCACTCTCACCCTGTACCCTTGTGGCAATGCCTGCACTATTGATGGGCTCCCTGTTCGGCAGCCCACCCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS CAA 90 bp GGGACTGTCAGAGGAGCGGGAACCACTTGGGCGAGACTGTGGAGGTaGCAGAGCCAAATGGTAGCTAGAGGAGCGGGCAGGCACCAATGG +
Preference number: 6 (lower is better)
Translates to: GTVRGAGTTWARLWR*QSQMVARGAGRHQW
Trigger: CCATTGGTGCCTGCCCGCTCCTCTAGCTACCATTTGGCTCTGCAACCTCCACAGTCTCGCCCAAGTGGTTCCCGCTCCTCTGACAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS TCA 72 bp ACTCGGATCTTCAGCTGTTCTACTCGCCCCAGAACCTaGGCCCGCTCCTCTTCCACAGCCAGCACCTCGCCT +
Preference number: 6 (lower is better)
Translates to: TRIFSCSTRPRT*ARSSSTASTSP
Trigger: AGGCGAGGTGCTGGCTGTGGAAGAGGAGCGGGCTCAGGTTCTGGGGCGAGTAGAACAGCTGAAGATCCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS TCA 72 bp GCCTCCGAAGCTCCATCTCCCGCTCCCTGGACTCCATaGGCCGGCTCTTCTCTGCGTGAGCTTCCTTTAGCA +
Preference number: 6 (lower is better)
Translates to: ASEAPSPAPWTP*AGSSLRELPLA
Trigger: TGCTAAAGGAAGCTCACGCAGAGAAGAGCCGGCTCATGGAGTCCAGGGAGCGGGAGATGGAGCTTCGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS TCA 72 bp GCCTCCTGGCTCCAGTCAGCCTCACCCTGGACTCCATaGGCCGGCTCTTCTCTGCGTGAGCTTCCTTTAGCA +
Preference number: 6 (lower is better)
Translates to: ASWLQSASPWTP*AGSSLRELPLA
Trigger: TGCTAAAGGAAGCTCACGCAGAGAAGAGCCGGCTCATGGAGTCCAGGGTGAGGCTGACTGGAGCCAGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138356.8
CDS GCA 72 bp CCTTGGTGCTTCGCGCCAGGAGCGTCTTCATGCTCCTaGTGGGTGCTCTCGGTGCTGCTGCATTCCTCTTTG +
Preference number: 6 (lower is better)
Translates to: PWCFAPGASSCS*WVLSVLLHSSL
Trigger: CAAAGAGGAATGCAGCAGCACCGAGAGCACCCAGCAGGAGCATGAAGACGCTCCTGGCGCGAAGCACCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 72 bp CTCTCCATCTCGGCCTCTCGGGCTGCCTCCTGCAGCTaGTGTTCCAGCTCCTTCACTCGGATCTTCAGCTGT +
Preference number: 6 (lower is better)
Translates to: LSISASRAASCS*CSSSFTRIFSC
Trigger: ACAGCTGAAGATCCGAGTGAAGGAGCTGGAACAGCAGCTGCAGGAGGCAGCCCGAGAGGCCGAGATGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 72 bp GCAGTGTGGCTGCCAGGTTGCGAGGAAGGCTACTGGTaGCATTCTGGGCGAGCAGAGCACTCTTTGGGGAAG +
Preference number: 6 (lower is better)
Translates to: AVWLPGCEEGYW*HSGRAEHSLGK
Trigger: CTTCCCCAAAGAGTGCTCTGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS GCA 72 bp TGCTGTAGGGCCAGCTGGCGCTTGGTCTCAATGTCCTaGAGTGTGGCTGCCAGGTTGCGAGGAAGGCTACTG +
Preference number: 6 (lower is better)
Translates to: CCRASWRLVSMS*SVAARLRGRLL
Trigger: CAGTAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS GCA 72 bp GCCGCCTTCTGCTTCAGCTCCGCCAGTCTCCTCCGTTaGTCCTCGATCACTTGGTGTCCTGCTGGGTCTTCA +
Preference number: 6 (lower is better)
Translates to: AAFCFSSASLLR*SSITWCPAGSS
Trigger: TGAAGACCCAGCAGGACACCAAGTGATCGAGGAGCAACGGAGGAGACTGGCGGAGCTGAAGCAGAAGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128326.8
ENSMUST00000148344.8
CDS CCA 72 bp CTGGAGAGGTGTTCTCATAGCTGGAGCCCACAGACATaGCACCGGGGCTGGTTGGAGGGGACAACAGGTAGC +
Preference number: 6 (lower is better)
Translates to: LERCSHSWSPQT*HRGWLEGTTGS
Trigger: GCTACCTGTTGTCCCCTCCAACCAGCCCCGGTGCCATGTCTGTGGGCTCCAGCTATGAGAACACCTCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148929.2
CDS CCA 72 bp GACTGGAACTTGGGGCTGCCAGGAATACTGGCGGGTTaGCTGCGGGCACCGGAAGATGGGTATTCACTCAGG +
Preference number: 6 (lower is better)
Translates to: DWNLGLPGILAG*LRAPEDGYSLR
Trigger: CCTGAGTGAATACCCATCTTCCGGTGCCCGCAGCCAACCCGCCAGTATTCCTGGCAGCCCCAAGTTCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 72 bp GCACTGGAGACTGGAACTTGGGGCTGCCAGGAATACTaGCGGGTTGGCTGCGGGCACCGGAAGATGGGTATT +
Preference number: 6 (lower is better)
Translates to: ALETGTWGCQEY*RVGCGHRKMGI
Trigger: AATACCCATCTTCCGGTGCCCGCAGCCAACCCGCCAGTATTCCTGGCAGCCCCAAGTTCCAGTCTCCAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 72 bp GTGCCGATCTTGTTTCGGGGAGCAGGCACTGGAGACTaGAACTTGGGGCTGCCAGGAATACTGGCGGGTTGG +
Preference number: 6 (lower is better)
Translates to: VPILFRGAGTGD*NLGLPGILAGW
Trigger: CCAACCCGCCAGTATTCCTGGCAGCCCCAAGTTCCAGTCTCCAGTGCCTGCTCCCCGAAACAAGATCGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 72 bp CGTCAGCTCGGCTGTACTCAGCACACAGGTTCAGGATaGTCTCCAGGCGCTGGCGTTCCAGCCTCTCCATCT +
Preference number: 6 (lower is better)
Translates to: RQLGCTQHTGSG*SPGAGVPASPS
Trigger: AGATGGAGAGGCTGGAACGCCAGCGCCTGGAGACCATCCTGAACCTGTGTGCTGAGTACAGCCGAGCTGACG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 72 bp GCAGCAAGGCCAGTCCCCAGCCCGGACATCAACTCCTaGTACCACTGCTCTAAGTCTACAGCAGGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: AARPVPSPDINS*YHCSKSTAGSS
Trigger: GCTGCTCCCTGCTGTAGACTTAGAGCAGTGGTACCAGGAGTTGATGTCCGGGCTGGGGACTGGCCTTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
CDS CCA 72 bp GCTGCCAGGTTGCGAGGAAGGCTACTGGTGCCATTCTaGGCGAGCAGAGCACTCTTTGGGGAAGGACTACGG +
Preference number: 6 (lower is better)
Translates to: AARLRGRLLVPF*ASRALFGEGLR
Trigger: CCGTAGTCCTTCCCCAAAGAGTGCTCTGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCAACCTGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS CAA 72 bp GGCTGCCGAACAGGGAGCCCATCAATAGTGCAGGCATaGCCACAAGGGTACAGGGTGAGAGTGCCCCGCAGA +
Preference number: 6 (lower is better)
Translates to: GCRTGSPSIVQA*PQGYRVRVPRR
Trigger: TCTGCGGGGCACTCTCACCCTGTACCCTTGTGGCAATGCCTGCACTATTGATGGGCTCCCTGTTCGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS CAA 72 bp AGAGGAGCGGGAACCACTTGGGCGAGACTGTGGAGGTaGCAGAGCCAAATGGTAGCTAGAGGAGCGGGCAGG +
Preference number: 6 (lower is better)
Translates to: RGAGTTWARLWR*QSQMVARGAGR
Trigger: CCTGCCCGCTCCTCTAGCTACCATTTGGCTCTGCAACCTCCACAGTCTCGCCCAAGTGGTTCCCGCTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CAA 72 bp CGCTTGGTCTCAATGTCCTGCAGTGTGGCTGCCAGGTaGCGAGGAAGGCTACTGGTGCCATTCTGGGCGAGC +
Preference number: 6 (lower is better)
Translates to: RLVSMSCSVAAR*RGRLLVPFWAS
Trigger: GCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS CAA 90 bp AGGCACTGGAGACTGGAACTTGGGGCTGCCAGGAATACTGGCGGGTaGGCTGCGGGCACCGGAAGATGGGTATTCACTCAGGCTGATAGC +
Preference number: 6 (lower is better)
Translates to: RHWRLELGAARNTGG*AAGTGRWVFTQADS
Trigger: GCTATCAGCCTGAGTGAATACCCATCTTCCGGTGCCCGCAGCCAACCCGCCAGTATTCCTGGCAGCCCCAAGTTCCAGTCTCCAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CAA 90 bp TCGGCAGGAGGTAACTCGACCTTTTGCTGTAGGGCCAGCTGGCGCTaGGTCTCAATGTCCTGCAGTGTGGCTGCCAGGTTGCGAGGAAGG +
Preference number: 6 (lower is better)
Translates to: SAGGNSTFCCRASWR*VSMSCSVAARLRGR
Trigger: CCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCAAAAGGTCGAGTTACCTCCTGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128326.8
ENSMUST00000148344.8
CDS TCA 72 bp GTGCCCGGGTTGCAGGTTGTGCTGTGTGGTTCCCATTaGCCAGGCTCTCCGATTCAGCAGAGCCAGGGTTGT +
Preference number: 6 (lower is better)
Translates to: VPGLQVVLCGSH*PGSPIQQSQGC
Trigger: ACAACCCTGGCTCTGCTGAATCGGAGAGCCTGGTCAATGGGAACCACACAGCACAACCTGCAACCCGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148929.2
CDS GCA 72 bp GGGTATTCACTCAGGCTGATAGCCACCACAGGTAACTaGCCACCTAGCCGGGGACTCTCAGTGGTTCTGCGG +
Preference number: 6 (lower is better)
Translates to: GYSLRLIATTGN*PPSRGLSVVLR
Trigger: CCGCAGAACCACTGAGAGTCCCCGGCTAGGTGGGCAGTTACCTGTGGTGGCTATCAGCCTGAGTGAATACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS GCA 72 bp GCTTGGTCTCAATGTCCTGCAGTGTGGCTGCCAGGTTaGGAGGAAGGCTACTGGTGCCATTCTGGGCGAGCA +
Preference number: 6 (lower is better)
Translates to: AWSQCPAVWLPG*EEGYWCHSGRA
Trigger: TGCTCGCCCAGAATGGCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS GCA 72 bp CAGCTGGCGCTTGGTCTCAATGTCCTGCAGTGTGGCTaGCAGGTTGCGAGGAAGGCTACTGGTGCCATTCTG +
Preference number: 6 (lower is better)
Translates to: QLALGLNVLQCG*QVARKATGAIL
Trigger: CAGAATGGCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS GCA 72 bp GCCGCCTTCTGCTTCAGCTCCGCCAGTCTCCTCCGTTaGTCCTCGATCACTTGGTGTCCCTTTTGCTGTAGG +
Preference number: 6 (lower is better)
Translates to: AAFCFSSASLLR*SSITWCPFCCR
Trigger: CCTACAGCAAAAGGGACACCAAGTGATCGAGGAGCAACGGAGGAGACTGGCGGAGCTGAAGCAGAAGGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000156918.8
CDS CCA 72 bp TGCAGGTCCTTTTCAATAGAGCTCACCAGGGAACTGTaGCTGGCACAGGCTGACGGTGCCCGGGTTGCAGGT +
Preference number: 6 (lower is better)
Translates to: CRSFSIELTREL*LAQADGARVAG
Trigger: ACCTGCAACCCGGGCACCGTCAGCCTGTGCCAGCCACAGTTCCCTGGTGAGCTCTATTGAAAAGGACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148929.2
CDS CCA 72 bp GCAGGAGGTAACTCGACCTTTTGCTGTAGGGCCAGCTaGCGCTTGGTCTCAATGTCCTGCAGTGTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: AGGNSTFCCRAS*RLVSMSCSVAA
Trigger: GGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCAAAAGGTCGAGTTACCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128326.8
ENSMUST00000148344.8
CDS CAA 72 bp CTGGCGCTGGACATGTTGTCCGGGGAACAGGCAGAGTaGCCGCCTGTAGAGATGCTGGTCTCCATGCTGTCT +
Preference number: 6 (lower is better)
Translates to: LALDMLSGEQAE*PPVEMLVSMLS
Trigger: AGACAGCATGGAGACCAGCATCTCTACAGGCGGCAACTCTGCCTGTTCCCCGGACAACATGTCCAGCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS CAA 72 bp ATCTTGCCCATGTCCAGACCACTGGCGCTGGACATGTaGTCCGGGGAACAGGCAGAGTTGCCGCCTGTAGAG +
Preference number: 6 (lower is better)
Translates to: ILPMSRPLALDM*SGEQAELPPVE
Trigger: CTCTACAGGCGGCAACTCTGCCTGTTCCCCGGACAACATGTCCAGCGCCAGTGGTCTGGACATGGGCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS CAA 90 bp CATCCACTTGGCTTCGGCTGGATGGTTAAAGCGCAGGAAGGTGGATaGACCCAGACACAACATGCAGCCCTGAGTGAGCCGGGTGGGCTG +
Preference number: 6 (lower is better)
Translates to: HPLGFGWMVKAQEGG*TQTQHAALSEPGGL
Trigger: CAGCCCACCCGGCTCACTCAGGGCTGCATGTTGTGTCTGGGTCAATCCACCTTCCTGCGCTTTAACCATCCAGCCGAAGCCAAGTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS CAA 90 bp TCCTCGATCACTTGGTGTCCCTTTTGCTGTAGGGCCAGCTGGCGCTaGGTCTCAATGTCCTGCAGTGTGGCTGCCAGGTTGCGAGGAAGG +
Preference number: 6 (lower is better)
Translates to: SSITWCPFCCRASWR*VSMSCSVAARLRGR
Trigger: CCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCAAAAGGGACACCAAGTGATCGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS TCA 72 bp GGCCAGCTGGCAGGTGATGCAGGATGGAATGATGCATaGGTGCAGGGAAGCCTGAAGGGCCTGCTGAAAAGG +
Preference number: 6 (lower is better)
Translates to: GQLAGDAGWNDA*VQGSLKGLLKR
Trigger: CCTTTTCAGCAGGCCCTTCAGGCTTCCCTGCACTCATGCATCATTCCATCCTGCATCACCTGCCAGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS TCA 72 bp TGTAGTACAACCGGTCATGGGTCTTCACACAGAAGGTaGGGGCCGGATTCGGACTCTTGGCTGCGCTGCGCA +
Preference number: 6 (lower is better)
Translates to: CSTTGHGSSHRR*GPDSDSWLRCA
Trigger: TGCGCAGCGCAGCCAAGAGTCCGAATCCGGCCCTCACCTTCTGTGTGAAGACCCATGACCGGTTGTACTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000144251.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 72 bp CTCCTCCGTTGCTCCTCGATCACTTGGTGTCCCTTTTaGTGTAGGGCCAGCTGGCGCTTGGTCTCAATGTCC +
Preference number: 6 (lower is better)
Translates to: LLRCSSITWCPF*CRASWRLVSMS
Trigger: GGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCAAAAGGGACACCAAGTGATCGAGGAGCAACGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS CCA 72 bp ACTGTCAGAGGAGCGGGAACCACTTGGGCGAGACTGTaGAGGTTGCAGAGCCAAATGGTAGCTAGAGGAGCG +
Preference number: 6 (lower is better)
Translates to: TVRGAGTTWARL*RLQSQMVARGA
Trigger: CGCTCCTCTAGCTACCATTTGGCTCTGCAACCTCCACAGTCTCGCCCAAGTGGTTCCCGCTCCTCTGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 72 bp TCGATCACTTGGTGTCCCTTTTGCTGTAGGGCCAGCTaGCGCTTGGTCTCAATGTCCTGCAGTGTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: SITWCPFCCRAS*RLVSMSCSVAA
Trigger: GGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCAAAAGGGACACCAAGTGATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000154723.3
ENSMUST00000156918.8
CDS CAA 72 bp GGCTTCGGCTGGATGGTTAAAGCGCAGGAAGGTGGATaGACCCAGACACAACATGCAGCCCTGAGTGAGCCG +
Preference number: 6 (lower is better)
Translates to: GFGWMVKAQEGG*TQTQHAALSEP
Trigger: CGGCTCACTCAGGGCTGCATGTTGTGTCTGGGTCAATCCACCTTCCTGCGCTTTAACCATCCAGCCGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS GCA 72 bp CTCCTTCCGGTTGGGAAGGTAACGTGTAAGAGGCCGTaGCTGGGAGAACTGCTTTTCCCGGAGCTTGACTTC +
Preference number: 6 (lower is better)
Translates to: LLPVGKVTCKRP*LGELLFPELDF
Trigger: GAAGTCAAGCTCCGGGAAAAGCAGTTCTCCCAGGCACGGCCTCTTACACGTTACCTTCCCAACCGGAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS CCA 72 bp AGGCAGGTGTCCACCCCGTGGCCTGATGACTCTATGTaGGTCTTCAGATCAAAGTCCTCCTTCCGGTTGGGA +
Preference number: 6 (lower is better)
Translates to: RQVSTPWPDDSM*VFRSKSSFRLG
Trigger: TCCCAACCGGAAGGAGGACTTTGATCTGAAGACCCACATAGAGTCATCAGGCCACGGGGTGGACACCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS CAA 90 bp CGCTCTTGGCGCTGCCGACGGTGGTACTCCAGAAGTTCGTCCTCATaGTCGCTGATCTCCGTGATGCTGTTTTTCCTCTCCCTTGGAATG +
Preference number: 6 (lower is better)
Translates to: RSWRCRRWYSRSSSS*SLISVMLFFLSLGM
Trigger: CATTCCAAGGGAGAGGAAAAACAGCATCACGGAGATCAGCGACAATGAGGACGAACTTCTGGAGTACCACCGTCGGCAGCGCCAAGAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 72 bp AGGGCCGGATTCGGACTCTTAGTCACCATGGTGAAGTaGAAAAACCTTTTCTTGGCTGCGCTGCGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: RAGFGLLVTMVK*KNLFLAALRRW
Trigger: CCACCTGCGCAGCGCAGCCAAGAAAAGGTTTTTCCACTTCACCATGGTGACTAAGAGTCCGAATCCGGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS CAA 72 bp GCCCGGACCCCTGCTGGAATCATACTTTTCATCCACTaGGCTTCGGCTGGATGGTTAAAGCGCAGGAAGGTG +
Preference number: 6 (lower is better)
Translates to: ARTPAGIILFIH*ASAGWLKRRKV
Trigger: CACCTTCCTGCGCTTTAACCATCCAGCCGAAGCCAAGTGGATGAAAAGTATGATTCCAGCAGGGGTCCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148929.2
CDS CAA 72 bp CGCTGCCGACGGTGGTACTCCAGAAGTTCGTCCTCATaGTCGCTGATCTCCGTGATGCTGTTTTTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: RCRRWYSRSSSS*SLISVMLFFLS
Trigger: GGAGAGGAAAAACAGCATCACGGAGATCAGCGACAATGAGGACGAACTTCTGGAGTACCACCGTCGGCAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CCA 72 bp TCAATCAGATCCAATGGCCCTTTCTGCACTACAGCCTaGGTCTTGCATCCAGGGCCTAGCTGGCTCCTATTG +
Preference number: 6 (lower is better)
Translates to: SIRSNGPFCTTA*VLHPGPSWLLL
Trigger: CAATAGGAGCCAGCTAGGCCCTGGATGCAAGACCCAGGCTGTAGTGCAGAAAGGGCCATTGGATCTGATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS CCA 72 bp CTGCTAAGCACCACATGTAGGCAGGTGTCCACCCCGTaGCCTGATGACTCTATGTGGGTCTTCAGATCAAAG +
Preference number: 6 (lower is better)
Translates to: LLSTTCRQVSTP*PDDSMWVFRSK
Trigger: CTTTGATCTGAAGACCCACATAGAGTCATCAGGCCACGGGGTGGACACCTGCCTACATGTGGTGCTTAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034611.15
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 72 bp GGGTACGAGTTGCTGCTAACCCATCCGAAAATGTTCTaGCCACCAGTTGTCGAGAGGGGCTGCTTGTTAGTA +
Preference number: 6 (lower is better)
Translates to: GYELLLTHPKMF*PPVVERGCLLV
Trigger: TACTAACAAGCAGCCCCTCTCGACAACTGGTGGGCAGAACATTTTCGGATGGGTTAGCAGCAACTCGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148344.8
CDS CAA 72 bp CACCAGATGAGGTTTGTCCGTCTGCACCTTCAGTCCTaGACCCGTCTCAATCAGATCCAATGGCCCTTTCTG +
Preference number: 6 (lower is better)
Translates to: HQMRFVRLHLQS*TRLNQIQWPFL
Trigger: CAGAAAGGGCCATTGGATCTGATTGAGACGGGTCAAGGACTGAAGGTGCAGACGGACAAACCTCATCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034611.15
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS GCA 72 bp GAGCTTCCTTTAGCATCTTCTCCATTTCCTCGATCTTaGCCATGTCCAGACCACTGGCGCTGGACATGTTGT +
Preference number: 6 (lower is better)
Translates to: ELPLASSPFPRS*PCPDHWRWTCC
Trigger: ACAACATGTCCAGCGCCAGTGGTCTGGACATGGGCAAGATCGAGGAAATGGAGAAGATGCTAAAGGAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000034611.15
ENSMUST00000123310.8
ENSMUST00000128326.8
ENSMUST00000134465.8
ENSMUST00000135436.8
ENSMUST00000138356.8
ENSMUST00000144251.8
ENSMUST00000147495.8
ENSMUST00000148344.8
ENSMUST00000156918.8
CDS GCA 72 bp CCAGGCTCCTCTAGCACCAATGAATCCATGATTTCCTaGAGGTCCTTTTCAATAGAGCTCACCAGGGAACTG +
Preference number: 6 (lower is better)
Translates to: PGSSSTNESMIS*RSFSIELTREL
Trigger: CAGTTCCCTGGTGAGCTCTATTGAAAAGGACCTGCAGGAAATCATGGATTCATTGGTGCTAGAGGAGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148929.2
CDS GCA 72 bp AGTCACCATGGTGAAGTGGAAAAACCTTTTCTTGGCTaGGCTGCGCAGGTGGTCATAGTACACTTCCTCGAT +
Preference number: 6 (lower is better)
Translates to: SHHGEVEKPFLG*AAQVVIVHFLD
Trigger: ATCGAGGAAGTGTACTATGACCACCTGCGCAGCGCAGCCAAGAAAAGGTTTTTCCACTTCACCATGGTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000138356.8
ENSMUST00000147495.8
CDS CCA 72 bp TGCTGGAATCATACTTTTCATCCACTTGGCTTCGGCTaGATGGTTAAAGCGCAGGAAGGTGGATTGACCCAG +
Preference number: 6 (lower is better)
Translates to: CWNHTFHPLGFG*MVKAQEGGLTQ
Trigger: CTGGGTCAATCCACCTTCCTGCGCTTTAACCATCCAGCCGAAGCCAAGTGGATGAAAAGTATGATTCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000034611.15
ENSMUST00000123406.8
ENSMUST00000134465.8
ENSMUST00000138356.8
ENSMUST00000147495.8
ENSMUST00000148929.2