Pregenerated sensors for PHLDA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041801Ensembl transcript IDs: ENSMUST00000038945.6
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCCTTCTTTGGGCATGTCTCAAAGCCAGAGGTCAAACAGCAGTCTaGAGAACCCAGAACCAAGGGCTGGACCAGGTAAGGCCCAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: ALLWACLKARGQTAV*RTQNQGLDQVRPKS Trigger: TGACTTGGGCCTTACCTGGTCCAGCCCTTGGTTCTGGGTTCTGCAGACTGCTGTTTGACCTCTGGCTTTGAGACATGCCCAAAGAAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| 3UTR-3UTR TCA 90 bp | GGGCATGTCTCAAAGCCAGAGGTCAAACAGCAGTCTGCAGAACCCAGAACCAAGAGTGGACAGAGAAGCTaGCATGTCTTCTGGGCACGG | + |
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Preference number: 2 (lower is better) Translates to: GHVSKPEVKQQSAEPRTKSGQRS*HVFWAR Trigger: CCGTGCCCAGAAGACATGTCAGCTTCTCTGTCCACT...CTTGGTTCTGGGTTCTGCAGACTGCTGTTTGACCTCTGGCTTTGAGACATGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAAGCCAGAGGTCAAACAGCAGTCTGCAGAACCCAGAACCAAGGGCTGGACCCAACCAACCAAAGTaGACAGAGAAGCTGACATGT | + |
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Preference number: 2 (lower is better) Translates to: SQSQRSNSSLQNPEPRAGPNQPK*TEKLTC Trigger: ACATGTCAGCTTCTCTGTCCACTTTGGTTGGTTGGG...TCCAGCCCTTGGTTCTGGGTTCTGCAGACTGCTGTTTGACCTCTGGCTTTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| 3UTR TCA 72 bp | CAGAACCAAGGGCTGGACCAGGTAAGGCCCAAGTCATaGTACTGGAGGCCAGGCCTGTGGCTCGCAAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: QNQGLDQVRPKS*YWRPGLWLASL Trigger: CAGACTTGCGAGCCACAGGCCTGGCCTCCAGTATCATGACTTGGGCCTTACCTGGTCCAGCCCTTGGTTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| 3UTR TCA 72 bp | AGCCAGGTCCCAACCAACCAAAGTGGACAGAGAAGCTaGCATGTCTTCTGGGCACGGAGATGGGAGAGGGGG | + |
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Preference number: 3 (lower is better) Translates to: SQVPTNQSGQRS*HVFWARRWERG Trigger: CCCCCTCTCCCATCTCCGTGCCCAGAAGACATGTCAGCTTCTCTGTCCACTTTGGTTGGTTGGGACCTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| 3UTR GCA 72 bp | TGGGCATGTCTCAAAGCCAGAGGTCAAACAGCAGTCTaGAGAACCCAGAACCAAGGGCTGGACCAGGTAAGG | + |
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Preference number: 3 (lower is better) Translates to: WACLKARGQTAV*RTQNQGLDQVR Trigger: CCTTACCTGGTCCAGCCCTTGGTTCTGGGTTCTGCAGACTGCTGTTTGACCTCTGGCTTTGAGACATGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| 3UTR CCA 72 bp | CTCAGCCCCTACTGGCTTCTGCTCTCCGTCTCTGGCTaGTTGGCTCCTTCCATGATGATAGGTTTATCTTCC | + |
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Preference number: 3 (lower is better) Translates to: LSPYWLLLSVSG*LAPSMMIGLSS Trigger: GGAAGATAAACCTATCATCATGGAAGGAGCCAACCAGCCAGAGACGGAGAGCAGAAGCCAGTAGGGGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| 3UTR CCA 72 bp | CATGCTCAGCCCCTACTGGCTTCTGCTCTCCGTCTCTaGCTGGTTGGCTCCTTCCATGATGATAGGTTTATC | + |
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Preference number: 3 (lower is better) Translates to: HAQPLLASALRL*LVGSFHDDRFI Trigger: GATAAACCTATCATCATGGAAGGAGCCAACCAGCCAGAGACGGAGAGCAGAAGCCAGTAGGGGCTGAGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| 3UTR TCA 72 bp | CATGATACTGGAGGCCAGGCCTGTGGCTCGCAAGTCTaGGCTGGATATAACAACAGTCTTAGTGTCCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: HDTGGQACGSQV*AGYNNSLSVQE Trigger: TTCCTGGACACTAAGACTGTTGTTATATCCAGCTCAGACTTGCGAGCCACAGGCCTGGCCTCCAGTATCATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| 3UTR TCA 72 bp | GAGCTGGATATAACAACAGTCTTAGTGTCCAGGAACTaGATCTTCATGCTCAGCCCCTACTGGCTTCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: ELDITTVLVSRN*IFMLSPYWLLL Trigger: GAGCAGAAGCCAGTAGGGGCTGAGCATGAAGATTCAGTTCCTGGACACTAAGACTGTTGTTATATCCAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| 3UTR-3UTR CAA 90 bp | GCATGTCTCAAAGCCAGAGGTCAAACAGCAGTCTGCAGAACCCAGAACCAAGGGTTTATCTTCCTCATGTaGATAGCTTCTGGCTCATCA | + |
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Preference number: 3 (lower is better) Translates to: ACLKARGQTAVCRTQNQGFIFLM*IASGSS Trigger: TGATGAGCCAGAAGCTATCAACATGAGGAAGATAAA...CCCTTGGTTCTGGGTTCTGCAGACTGCTGTTTGACCTCTGGCTTTGAGACATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS-3UTR GCA 90 bp | TCTTCATGCTCAGCCCCTACTGGCTTCTGCTCTCCGTCTCTGGCTGGTTGGCTCTGGGCCGGCCGCCCGTaGCCTTGGCCTCGAAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: SSCSAPTGFCSPSLAGWLWAGRP*PWPRRA Trigger: AGCTCTTCGAGGCCAAGGGCACGGGCGGCCGGCCCA...GAGCCAACCAGCCAGAGACGGAGAGCAGAAGCCAGTAGGGGCTGAGCATGAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS-3UTR CCA 90 bp | TCTTCATGCTCAGCCCCTACTGGCTTCTGCTCTCCGTCTCTGGCTGGTTGGCTCGGCCGCCCGTGCCCTTaGCCTCGAAGAGCTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SSCSAPTGFCSPSLAGWLGRPCP*PRRAAA Trigger: GGCTGCAGCTCTTCGAGGCCAAGGGCACGGGCGGCC...GAGCCAACCAGCCAGAGACGGAGAGCAGAAGCCAGTAGGGGCTGAGCATGAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS-3UTR TCA 90 bp | GGGCATGTCTCAAAGCCAGAGGTCAAACAGCAGTCTGCAGAACCCAGAACCAAGGCAGCCCGCGCTCGGTaGGCACGCAGCGCTTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: GHVSKPEVKQQSAEPRTKAARAR*ARSASA Trigger: AGCGGAAGCGCTGCGTGCTCACCGAGCGCGGGCTGC...CTTGGTTCTGGGTTCTGCAGACTGCTGTTTGACCTCTGGCTTTGAGACATGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS-3UTR GCA 90 bp | TCTTCATGCTCAGCCCCTACTGGCTTCTGCTCTCCGTCTCTGGCTGGTTGGCTCCCAGTCCCAAGACTCTaGCGGGCCCGCACAGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSCSAPTGFCSPSLAGWLPVPRL*RARTVW Trigger: CCAGACTGTGCGGGCCCGGCAGAGTCTTGGGACTGG...GAGCCAACCAGCCAGAGACGGAGAGCAGAAGCCAGTAGGGGCTGAGCATGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS-3UTR GCA 90 bp | CACGCCATGAAGAACAGCCAGCCCTTCTTTGGGCATGTCTCAAAGCCAGAGGTCTTCCGCTTCCACAGCTaGAGCAGCCCGCCGCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: HAMKNSQPFFGHVSKPEVFRFHS*SSPPLR Trigger: GCGCAGCGGCGGGCTGCTGCAGCTGTGGAAGCGGAA...GACCTCTGGCTTTGAGACATGCCCAAAGAAGGGCTGGCTGTTCTTCATGGCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS-3UTR GCA 90 bp | GCATGTCTCAAAGCCAGAGGTCAAACAGCAGTCTGCAGAACCCAGAACCAAGGGAGATGTGGCGCCCGGTaGTCTCTACGCACTCCACGG | + |
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Preference number: 4 (lower is better) Translates to: ACLKARGQTAVCRTQNQGRCGAR*SLRTPR Trigger: CCGTGGAGTGCGTAGAGAGCACCGGGCGCCACATCT...CCCTTGGTTCTGGGTTCTGCAGACTGCTGTTTGACCTCTGGCTTTGAGACATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS-3UTR TCA 90 bp | GCATGTCTCAAAGCCAGAGGTCAAACAGCAGTCTGCAGAACCCAGAACCAAGGGCTTCGGTCACTAGCGTaGAGTAGATGTGGCGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: ACLKARGQTAVCRTQNQGLRSLA*SRCGAR Trigger: CCGGGCGCCACATCTACTTCACGCTAGTGACCGAAG...CCCTTGGTTCTGGGTTCTGCAGACTGCTGTTTGACCTCTGGCTTTGAGACATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS-3UTR GCA 90 bp | ATGAAGAACAGCCAGCCCTTCTTTGGGCATGTCTCAAAGCCAGAGGTCAAACAGTTGGCCTCGAAGAGCTaGAGCCCGCGCTCGGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: MKNSQPFFGHVSKPEVKQLASKS*SPRSVS Trigger: GCTCACCGAGCGCGGGCTGCAGCTCTTCGAGGCCAA...CTGTTTGACCTCTGGCTTTGAGACATGCCCAAAGAAGGGCTGGCTGTTCTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS-3UTR TCA 90 bp | ACTGAATCTTCATGCTCAGCCCCTACTGGCTTCTGCTCTCCGTCTCTGGCTGGTGTCTGGATGGCCTGTTaGTTCTTGAACTTGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: TESSCSAPTGFCSPSLAGVWMAC*FLNLTR Trigger: CCTGGTCAAGTTCAAGAATCAACAGGCCATCCAGAC...ACCAGCCAGAGACGGAGAGCAGAAGCCAGTAGGGGCTGAGCATGAAGATTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| 3UTR CAA 72 bp | GGCTCCTTCCATGATGATAGGTTTATCTTCCTCATGTaGATAGCTTCTGGCTCATCACATGTAGCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GSFHDDRFIFLM*IASGSSHVARS Trigger: GGACCTGGCTACATGTGATGAGCCAGAAGCTATCAACATGAGGAAGATAAACCTATCATCATGGAAGGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS TCA 90 bp | GGGGGCAGCGGAAGTCGATCTCGCCCCCGCCTTCGGTCACTAGCGTaGAGTAGATGTGGCGCCCGGTGCTCTCTACGCACTCCACGGCTT | + |
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Preference number: 5 (lower is better) Translates to: GGSGSRSRPRLRSLA*SRCGARCSLRTPRL Trigger: AAGCCGTGGAGTGCGTAGAGAGCACCGGGCGCCACATCTACTTCACGCTAGTGACCGAAGGCGGGGGCGAGATCGACTTCCGCTGCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS-3UTR CAA 90 bp | ACTGAATCTTCATGCTCAGCCCCTACTGGCTTCTGCTCTCCGTCTCTGGCTGGTCGGCCGCCCGTGCCCTaGGCCTCGAAGAGCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TESSCSAPTGFCSPSLAGRPPVP*ASKSCS Trigger: GCTGCAGCTCTTCGAGGCCAAGGGCACGGGCGGCCG...ACCAGCCAGAGACGGAGAGCAGAAGCCAGTAGGGGCTGAGCATGAAGATTCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS-3UTR CAA 90 bp | AACAACAGTCTTAGTGTCCAGGAACTGAATCTTCATGCTCAGCCCCTACTGGCTACGCACTCCACGGCTTaGATGCGGGCGAAGCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: NNSLSVQELNLHAQPLLATHSTA*MRAKLS Trigger: GCTCAGCTTCGCCCGCATCAAAGCCGTGGAGTGCGT...AGCCAGTAGGGGCTGAGCATGAAGATTCAGTTCCTGGACACTAAGACTGTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS-3UTR CAA 90 bp | AACAACAGTCTTAGTGTCCAGGAACTGAATCTTCATGCTCAGCCCCTACTGGCTAGTCTGGATGGCCTGTaGATTCTTGAACTTGACCAG | + |
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Preference number: 5 (lower is better) Translates to: NNSLSVQELNLHAQPLLASLDGL*ILELDQ Trigger: CTGGTCAAGTTCAAGAATCAACAGGCCATCCAGACT...AGCCAGTAGGGGCTGAGCATGAAGATTCAGTTCCTGGACACTAAGACTGTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS CAA 72 bp | GCGAAGCTGAGCTCCTTGGGCCGGCCGCCCGTGCCCTaGGCCTCGAAGAGCTGCAGCCCGCGCTCGGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: AKLSSLGRPPVP*ASKSCSPRSVS Trigger: GCTCACCGAGCGCGGGCTGCAGCTCTTCGAGGCCAAGGGCACGGGCGGCCGGCCCAAGGAGCTCAGCTTCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS CAA 90 bp | TTGATGCGGGCGAAGCTGAGCTCCTTGGGCCGGCCGCCCGTGCCCTaGGCCTCGAAGAGCTGCAGCCCGCGCTCGGTGAGCACGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: LMRAKLSSLGRPPVP*ASKSCSPRSVSTQR Trigger: GCGCTGCGTGCTCACCGAGCGCGGGCTGCAGCTCTTCGAGGCCAAGGGCACGGGCGGCCGGCCCAAGGAGCTCAGCTTCGCCCGCATCAA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS CAA 90 bp | CTCTCTACGCACTCCACGGCTTTGATGCGGGCGAAGCTGAGCTCCTaGGGCCGGCCGCCCGTGCCCTTGGCCTCGAAGAGCTGCAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: LSTHSTALMRAKLSS*GRPPVPLASKSCSP Trigger: CGGGCTGCAGCTCTTCGAGGCCAAGGGCACGGGCGGCCGGCCCAAGGAGCTCAGCTTCGCCCGCATCAAAGCCGTGGAGTGCGTAGAGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS TCA 72 bp | TGCCCTTGGCCTCGAAGAGCTGCAGCCCGCGCTCGGTaGGCACGCAGCGCTTCCGCTTCCACAGCTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: CPWPRRAAARAR*ARSASASTAAA Trigger: TGCTGCAGCTGTGGAAGCGGAAGCGCTGCGTGCTCACCGAGCGCGGGCTGCAGCTCTTCGAGGCCAAGGGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS CAA 72 bp | ATGTGGCGCCCGGTGCTCTCTACGCACTCCACGGCTTaGATGCGGGCGAAGCTGAGCTCCTTGGGCCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: MWRPVLSTHSTA*MRAKLSSLGRP Trigger: CGGCCGGCCCAAGGAGCTCAGCTTCGCCCGCATCAAAGCCGTGGAGTGCGTAGAGAGCACCGGGCGCCACAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS TCA 72 bp | GGAAGTCGATCTCGCCCCCGCCTTCGGTCACTAGCGTaGAGTAGATGTGGCGCCCGGTGCTCTCTACGCACT | + |
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Preference number: 6 (lower is better) Translates to: GSRSRPRLRSLA*SRCGARCSLRT Trigger: AGTGCGTAGAGAGCACCGGGCGCCACATCTACTTCACGCTAGTGACCGAAGGCGGGGGCGAGATCGACTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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| CDS CAA 90 bp | CCCAGTCCCAAGACTCTGCCGGGCCCGCACAGTCTGGATGGCCTGTaGATTCTTGAACTTGACCAGGCCCAGGGTGATCTGAGCGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: PSPKTLPGPHSLDGL*ILELDQAQGDLSVP Trigger: TGGAACGCTCAGATCACCCTGGGCCTGGTCAAGTTCAAGAATCAACAGGCCATCCAGACTGTGCGGGCCCGGCAGAGTCTTGGGACTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038945.6 |
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