Pregenerated sensors for PHLDA2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000010760

Ensembl transcript IDs: ENSMUST00000010904.5, ENSMUST00000207425.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	ATATCTTCGGTGAAGAGCAGCGGCGGCGTCACCCGGGGCATCCCCTaGGCTCCTGGGCTCCTGTCTGATGCGGCAGCGTGGGCTGGTTCC	+
Preference number: 1 (lower is better) Translates to: ISSVKSSGGVTRGIP*APGLLSDAAAWAGS Trigger: GGAACCAGCCCACGCTGCCGCATCAGACAGGAGCCCAGGAGCCCAGGGGATGCCCCGGGTGACGCCGCCGCTGCTCTTCACCGAAGATAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010904.5
CDS TCA 90 bp	TGGCGGGGCTGGTTTTCCCGGAGAAGAGGCGCAGGCGGTCGGCGGTaGGCACGCAGCGCTTCTTCTTCCATACCTGGAACAGGCTGTCGC	+
Preference number: 5 (lower is better) Translates to: WRGWFSRRRGAGGRR*ARSASSSIPGTGCR Trigger: GCGACAGCCTGTTCCAGGTATGGAAGAAGAAGCGCTGCGTGCTCACCGCCGACCGCCTGCGCCTCTTCTCCGGGAAAACCAGCCCCGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010904.5 ENSMUST00000207425.2
CDS TCA 90 bp	AGTCTTGCAGCGCCCGACGGTTCTGGAAGTCGATCAGCGCCATGGTaGTGGCCGCGTTCCAGCAGCTCTCCACCGTGCAGCGGAAGTCGA	+
Preference number: 5 (lower is better) Translates to: SLAAPDGSGSRSAPW*WPRSSSSPPCSGSR Trigger: TCGACTTCCGCTGCACGGTGGAGAGCTGCTGGAACGCGGCCATCACCATGGCGCTGATCGACTTCCAGAACCGTCGGGCGCTGCAAGACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010904.5
CDS TCA 72 bp	GCGCCCGACGGTTCTGGAAGTCGATCAGCGCCATGGTaGTGGCCGCGTTCCAGCAGCTCTCCACCGTGCAGC	+
Preference number: 6 (lower is better) Translates to: APDGSGSRSAPW*WPRSSSSPPCS Trigger: GCTGCACGGTGGAGAGCTGCTGGAACGCGGCCATCACCATGGCGCTGATCGACTTCCAGAACCGTCGGGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010904.5
CDS TCA 72 bp	TGGTTTTCCCGGAGAAGAGGCGCAGGCGGTCGGCGGTaGGCACGCAGCGCTTCTTCTTCCATACCTGGAACA	+
Preference number: 6 (lower is better) Translates to: WFSRRRGAGGRR*ARSASSSIPGT Trigger: TGTTCCAGGTATGGAAGAAGAAGCGCTGCGTGCTCACCGCCGACCGCCTGCGCCTCTTCTCCGGGAAAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010904.5 ENSMUST00000207425.2
CDS CAA 72 bp	AGACTCAGAGCGCTGATACCGGTAGCGGGGAAAGTCTaGCAGCGCCCGACGGTTCTGGAAGTCGATCAGCGC	+
Preference number: 6 (lower is better) Translates to: RLRALIPVAGKV*QRPTVLEVDQR Trigger: GCGCTGATCGACTTCCAGAACCGTCGGGCGCTGCAAGACTTTCCCCGCTACCGGTATCAGCGCTCTGAGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010904.5
CDS CAA 90 bp	AGGCATTTCAGACTCAGAGCGCTGATACCGGTAGCGGGGAAAGTCTaGCAGCGCCCGACGGTTCTGGAAGTCGATCAGCGCCATGGTGAT	+
Preference number: 6 (lower is better) Translates to: RHFRLRALIPVAGKV*QRPTVLEVDQRHGD Trigger: ATCACCATGGCGCTGATCGACTTCCAGAACCGTCGGGCGCTGCAAGACTTTCCCCGCTACCGGTATCAGCGCTCTGAGTCTGAAATGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010904.5
CDS GCA 72 bp	TTGGTGACGATGGTGAAGTACACGTACTTAGAGGTGTaGTCCACGCAGTCCACCTTGAGGATGGAGTGGAAA	+
Preference number: 6 (lower is better) Translates to: LVTMVKYTYLEV*STQSTLRMEWK Trigger: TTTCCACTCCATCCTCAAGGTGGACTGCGTGGAGCACACCTCTAAGTACGTGTACTTCACCATCGTCACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010904.5 ENSMUST00000207425.2

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