Pregenerated sensors for PHKG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025537Ensembl transcript IDs: ENSMUST00000026617.13, ENSMUST00000140667.2, ENSMUST00000154932.3
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGACTTaGACACTGGACCTTTGGAAGAGCAGTCGGGTACTCTTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: ISLRMVVSHHVVAGT*TLDLWKSSRVLLPT Trigger: AGTGGGTAAGAGTACCCGACTGCTCTTCCAAAGGTCCAGTGTTCAAGTCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR GCA 90 bp | GCAACAGGCACATGCCACAGCACATCCAGCTCCAGCTGTAATTACTaGTGTTTACTGGGAACACCCTGTGCTTCTAGAGGCAAGCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: ATGTCHSTSSSSCNY*CLLGTPCASRGKPL Trigger: CAAAGGCTTGCCTCTAGAAGCACAGGGTGTTCCCAGTAAACAGCAGTAATTACAGCTGGAGCTGGATGTGCTGTGGCATGTGCCTGTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR CCA 90 bp | GCATCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGACTTGAACACTGGACCTTTGGAAGAGCAGTCGGGTACTCTT | + |
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Preference number: 1 (lower is better) Translates to: ASDLVTDGCEPPCGC*DLNTGPLEEQSGTL Trigger: AAGAGTACCCGACTGCTCTTCCAAAGGTCCAGTGTTCAAGTCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR TCA 90 bp | ACTGCTGTTTACTGGGAACACCCTGTGCTTCTAGAGGCAAGCCTTTaGGAGCACAGAGTAGGGCCACCTATTCCTTTGCAGAAGGCTACT | + |
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Preference number: 1 (lower is better) Translates to: TAVYWEHPVLLEASL*EHRVGPPIPLQKAT Trigger: AGTAGCCTTCTGCAAAGGAATAGGTGGCCCTACTCTGTGCTCTCAAAGGCTTGCCTCTAGAAGCACAGGGTGTTCCCAGTAAACAGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR GCA 90 bp | CCAGTTTCAGGGTTTCTGATGCCTTCTTGTGACCTCTACAGGTACTaGATGCATGTGGGTTACATAAAATGCATGCAGCTAAAACATACA | + |
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Preference number: 1 (lower is better) Translates to: PVSGFLMPSCDLYRY*MHVGYIKCMQLKHT Trigger: TGTATGTTTTAGCTGCATGCATTTTATGTAACCCACATGCATGCAGTACCTGTAGAGGTCACAAGAAGGCATCAGAAACCCTGAAACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR TCA 90 bp | AGCTATCTATACAACTCCAGTTTCAGGGTTTCTGATGCCTTCTTGTaGCCTCTACAGGTACTGCATGCATGTGGGTTACATAAAATGCAT | + |
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Preference number: 1 (lower is better) Translates to: SYLYNSSFRVSDAFL*PLQVLHACGLHKMH Trigger: ATGCATTTTATGTAACCCACATGCATGCAGTACCTGTAGAGGTCACAAGAAGGCATCAGAAACCCTGAAACTGGAGTTGTATAGATAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR CAA 90 bp | GATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGACTaGAACACTGGACCTTTGGAAGAGCAGTCGGGTACTCTTACCCAC | + |
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Preference number: 2 (lower is better) Translates to: DLVTDGCEPPCGCWD*NTGPLEEQSGTLTH Trigger: GTGGGTAAGAGTACCCGACTGCTCTTCCAAAGGTCCAGTGTTCAAGTCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGCATCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAGCTGTACCAGAGGTTaGATTTGGAGACCTTACACT | + |
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Preference number: 2 (lower is better) Translates to: RGHQISLRMVVSHHVVAGSCTRG*IWRPYT Trigger: AGTGTAAGGTCTCCAAATTCAACCTCTGGTACAGCT...CCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGATGCCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR-3UTR GCA 90 bp | CTTATAGCTCCCAGAATACATGTGCTCTATGCCCTTCCATTTCTGCCTATCACGGGCCACCTATTCCTTTaGAGAAGGCTACTTGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LIAPRIHVLYALPFLPITGHLFL*RRLLGA Trigger: TGCCCCAAGTAGCCTTCTGCAAAGGAATAGGTGGCC...CGTGATAGGCAGAAATGGAAGGGCATAGAGCACATGTATTCTGGGAGCTATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR-3UTR TCA 90 bp | GACCTCTACAGGTACTGCATGCATGTGGGTTACATAAAATGCATGCAGCTAAAACTAGAGGCAAGCCTTTaGGAGCACAGAGTAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: DLYRYCMHVGYIKCMQLKLEASL*EHRVGP Trigger: TGGCCCTACTCTGTGCTCTCAAAGGCTTGCCTCTAG...TTTTAGCTGCATGCATTTTATGTAACCCACATGCATGCAGTACCTGTAGAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGCTCAGCTATCTATACAACTCCAGTTTCAGGGTTTCTGATGCCTTCTTGAGACATCAACAAAGGTaGACAGTAGAGAAGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: GGLSYLYNSSFRVSDAFLRHQQR*TVEKPE Trigger: TTCTGGCTTCTCTACTGTGCACCTTTGTTGATGTCT...CAAGAAGGCATCAGAAACCCTGAAACTGGAGTTGTATAGATAGCTGAGCCCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR-3UTR GCA 90 bp | TTAGCTGTACCAGAGGTTGAATTTGGAGACCTTACACTCACCACAGGGTTACATTCCAGCTGTAATTACTaGTGTTTACTGGGAACACCC | + |
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Preference number: 2 (lower is better) Translates to: LAVPEVEFGDLTLTTGLHSSCNY*CLLGTP Trigger: GGGTGTTCCCAGTAAACAGCAGTAATTACAGCTGGA...ATGTAACCCTGTGGTGAGTGTAAGGTCTCCAAATTCAACCTCTGGTACAGCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR-3UTR CCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATTTGCAGAAGGCTACTTaGGGCATCCTCTTCTCACAA | + |
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Preference number: 2 (lower is better) Translates to: FIICKYTVAVFRHTRRGHLQKAT*GILFSQ Trigger: TTGTGAGAAGAGGATGCCCCAAGTAGCCTTCTGCAA...ATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR TCA 72 bp | CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGACTTaGACACTGGACCTTTGGAAGAGCAGTCGGGTACTC | + |
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Preference number: 3 (lower is better) Translates to: RMVVSHHVVAGT*TLDLWKSSRVL Trigger: GAGTACCCGACTGCTCTTCCAAAGGTCCAGTGTTCAAGTCCCAGCAACCACATGGTGGCTCACAACCATCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR CCA 72 bp | CTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGACTTGAACACTGGACCTTTGGAAGAGCAGTCG | + |
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Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGC*DLNTGPLEEQS Trigger: CGACTGCTCTTCCAAAGGTCCAGTGTTCAAGTCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR CCA 72 bp | AGAGTAGGGCCACCTATTCCTTTGCAGAAGGCTACTTaGGGCATCCTCTTCTCACAAGTCCCTCTGTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: RVGPPIPLQKAT*GILFSQVPLSA Trigger: AGCAGACAGAGGGACTTGTGAGAAGAGGATGCCCCAAGTAGCCTTCTGCAAAGGAATAGGTGGCCCTACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR GCA 72 bp | ACATGCCACAGCACATCCAGCTCCAGCTGTAATTACTaGTGTTTACTGGGAACACCCTGTGCTTCTAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: TCHSTSSSSCNY*CLLGTPCASRG Trigger: GCCTCTAGAAGCACAGGGTGTTCCCAGTAAACAGCAGTAATTACAGCTGGAGCTGGATGTGCTGTGGCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR GCA 72 bp | CAGAAGGCTTATAGCTCCCAGAATACATGTGCTCTATaGCCTTCCATTTCTGCCTATCACGGTCTCAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: QKAYSSQNTCAL*PSISAYHGLSC Trigger: GCAGCTGAGACCGTGATAGGCAGAAATGGAAGGGCATAGAGCACATGTATTCTGGGAGCTATAAGCCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR TCA 72 bp | GCTCAGCTATCTATACAACTCCAGTTTCAGGGTTTCTaGTGCCTTCTTGTGACCTCTACAGGTACTGCATGC | + |
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Preference number: 3 (lower is better) Translates to: AQLSIQLQFQGF*CLLVTSTGTAC Trigger: GCATGCAGTACCTGTAGAGGTCACAAGAAGGCATCAGAAACCCTGAAACTGGAGTTGTATAGATAGCTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR-3UTR CAA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATTCTAGAGGCAAGCCTTaGAGAGCACAGAGTAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: FIICKYTVAVFRHTRRGHSRGKP*RAQSRA Trigger: GGCCCTACTCTGTGCTCTCAAAGGCTTGCCTCTAGA...ATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR GCA 72 bp | CTCCCAGAATACATGTGCTCTATGCCCTTCCATTTCTaGCTATCACGGTCTCAGCTGCGTTGGATTTATTAT | + |
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Preference number: 3 (lower is better) Translates to: LPEYMCSMPFHF*LSRSQLRWIYY Trigger: ATAATAAATCCAACGCAGCTGAGACCGTGATAGGCAGAAATGGAAGGGCATAGAGCACATGTATTCTGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR TCA 72 bp | CTTCCTCAAATATCCATAACTTTAGCTAGACAGTTATaGGCGCCTGTTCTTGCTGAGGAGGGGTTCAATTCC | + |
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Preference number: 3 (lower is better) Translates to: LPQISITLARQL*APVLAEEGFNS Trigger: GGAATTGAACCCCTCCTCAGCAAGAACAGGCGCTCATAACTGTCTAGCTAAAGTTATGGATATTTGAGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR GCA 90 bp | GACCTTTGGAAGAGCAGTCGGGTACTCTTACCCACTGAGCCATCACACCAGCCCAGCATTTGCTTCCGGTaGCAGAAAGGCGGGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: DLWKSSRVLLPTEPSHQPSICFR*QKGGEP Trigger: TGGCTCCCCGCCTTTCTGGCACCGGAAGCAAATGCT...GGGCTGGTGTGATGGCTCAGTGGGTAAGAGTACCCGACTGCTCTTCCAAAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR TCA 90 bp | CCCGTGATCCTACTGTCTCGGGGCAACAGGCACATGCCACAGCACATCCAGCTCCCCGATGGACAATGTTaGGTTTGTGCAGGGTACAGA | + |
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Preference number: 4 (lower is better) Translates to: PVILLSRGNRHMPQHIQLPDGQC*VCAGYR Trigger: TCTGTACCCTGCACAAACTCAACATTGTCCATCGGG...GAGCTGGATGTGCTGTGGCATGTGCCTGTTGCCCCGAGACAGTAGGATCACGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR CCA 90 bp | AGAGGGCATCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGTCTCCTGGCTGCAGCTaGCAGGAAAACCCGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: RGHQISLRMVVSHHVVAGSPGCS*QENPKS Trigger: AGACTTCGGGTTTTCCTGCCAGCTGCAGCCAGGAGA...CCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGATGCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR TCA 90 bp | GACCTTTGGAAGAGCAGTCGGGTACTCTTACCCACTGAGCCATCACACCAGCCCCCATGGAGCACTGTATaGTTTCAGGGGCCAGATAAC | + |
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Preference number: 4 (lower is better) Translates to: DLWKSSRVLLPTEPSHQPPWSTV*FQGPDN Trigger: GTTATCTGGCCCCTGAAATCATACAGTGCTCCATGG...GGGCTGGTGTGATGGCTCAGTGGGTAAGAGTACCCGACTGCTCTTCCAAAGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR CCA 90 bp | GCAGTCGGGTACTCTTACCCACTGAGCCATCACACCAGCCCGAGGTCAATAAATCGTATTCCTGGCATGTaGGTTTGTGGATGCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: AVGYSYPLSHHTSPRSINRIPGM*VCGCSA Trigger: GGCGCTGCATCCACAAACCCACATGCCAGGAATACG...ATTTATTGACCTCGGGCTGGTGTGATGGCTCAGTGGGTAAGAGTACCCGACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR CCA 90 bp | GCAGTCGGGTACTCTTACCCACTGAGCCATCACACCAGCCCGAGGTCAATAAATTCGGAGCTTCTCTCCTaGCTGCAGCTGGCAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: AVGYSYPLSHHTSPRSINSELLS*LQLAGK Trigger: TTTTCCTGCCAGCTGCAGCCAGGAGAGAAGCTCCGA...ATTTATTGACCTCGGGCTGGTGTGATGGCTCAGTGGGTAAGAGTACCCGACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| 3UTR CAA 72 bp | ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGACTaGAACACTGGACCTTTGGAAGAGCAGTCGGGTACT | + |
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Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NTGPLEEQSGT Trigger: AGTACCCGACTGCTCTTCCAAAGGTCCAGTGTTCAAGTCCCAGCAACCACATGGTGGCTCACAACCATCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR TCA 90 bp | TTACTGGGAACACCCTGTGCTTCTAGAGGCAAGCCTTTGAGAGCACAGAGTAGGCCAGCAGGGCCCGCATaGTCTTTCTGGTTTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LLGTPCASRGKPLRAQSRPAGPA*SFWFPS Trigger: AGAAGGAAACCAGAAAGATCATGCGGGCCCTGCTGG...CCTACTCTGTGCTCTCAAAGGCTTGCCTCTAGAAGCACAGGGTGTTCCCAGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR GCA 90 bp | TTACTGGGAACACCCTGTGCTTCTAGAGGCAAGCCTTTGAGAGCACAGAGTAGGAGGGCGGCTCTGTTCTaGTGTTGCCCTTTCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: LLGTPCASRGKPLRAQSRRAALF*CCPFFT Trigger: GGTGAAGAAAGGGCAACAGCAGAACAGAGCCGCCCT...CCTACTCTGTGCTCTCAAAGGCTTGCCTCTAGAAGCACAGGGTGTTCCCAGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR CCA 90 bp | TTGCAGAAGGCTACTTGGGGCATCCTCTTCTCACAAGTCCCTCTGTCTGCTTTCTGGCATGTGGGTTTGTaGATGCAGCGCCTGACCACA | + |
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Preference number: 4 (lower is better) Translates to: LQKATWGILFSQVPLSAFWHVGL*MQRLTT Trigger: TGTGGTCAGGCGCTGCATCCACAAACCCACATGCCA...GAAAGCAGACAGAGGGACTTGTGAGAAGAGGATGCCCCAAGTAGCCTTCTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR CCA 90 bp | CTAGAACCCGTGATCCTACTGTCTCGGGGCAACAGGCACATGCCACAGCACATCTTCACTGCGTATTCCTaGCATGTGGGTTTGTGGATG | + |
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Preference number: 4 (lower is better) Translates to: LEPVILLSRGNRHMPQHIFTAYS*HVGLWM Trigger: CATCCACAAACCCACATGCCAGGAATACGCAGTGAA...GATGTGCTGTGGCATGTGCCTGTTGCCCCGAGACAGTAGGATCACGGGTTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR TCA 90 bp | TTGCAGAAGGCTACTTGGGGCATCCTCTTCTCACAAGTCCCTCTGTCTGCTTTCGTCATCCCACTCTGGTaGGCCAAACTGGTATTTGCC | + |
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Preference number: 4 (lower is better) Translates to: LQKATWGILFSQVPLSAFVIPLW*AKLVFA Trigger: GGCAAATACCAGTTTGGCTCACCAGAGTGGGATGAC...GAAAGCAGACAGAGGGACTTGTGAGAAGAGGATGCCCCAAGTAGCCTTCTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR TCA 90 bp | GGCTCAGCTATCTATACAACTCCAGTTTCAGGGTTTCTGATGCCTTCTTGTGACGCCGAGCAGCGGTCCTaGGGTTGCACCACCAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: GSAIYTTPVSGFLMPSCDAEQRS*GCTTKN Trigger: ATTCTTGGTGGTGCAACCTCAGGACCGCTGCTCGGC...GTCACAAGAAGGCATCAGAAACCCTGAAACTGGAGTTGTATAGATAGCTGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR GCA 90 bp | TTTGCAGAAGGCTACTTGGGGCATCCTCTTCTCACAAGTCCCTCTGTCTGCTTTTGTCCCGAGACCTTCTaGAGGATGTCCACCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: FAEGYLGHPLLTSPSVCFCPETF*RMSTSF Trigger: GAAGGAGGTGGACATCCTGCAGAAGGTCTCGGGACA...AAAGCAGACAGAGGGACTTGTGAGAAGAGGATGCCCCAAGTAGCCTTCTGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR CCA 90 bp | GTGGGCTCAGCTATCTATACAACTCCAGTTTCAGGGTTTCTGATGCCTTCTTGTAGAGGAGCACAGCCTTaGGCGTGTTCTCGAAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: VGSAIYTTPVSGFLMPSCRGAQP*ACSRRG Trigger: CCCTCTTCGAGAACACGCCCAAGGCTGTGCTCCTCT...ACAAGAAGGCATCAGAAACCCTGAAACTGGAGTTGTATAGATAGCTGAGCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR CCA 90 bp | CTAGAACCCGTGATCCTACTGTCTCGGGGCAACAGGCACATGCCACAGCACATCAGAAGAAGAAAGTGTTaGTCTCGTAAGTGTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LEPVILLSRGNRHMPQHIRRRKC*SRKCPS Trigger: TGAAGGACACTTACGAGACCAACACTTTCTTCTTCT...GATGTGCTGTGGCATGTGCCTGTTGCCCCGAGACAGTAGGATCACGGGTTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR GCA 90 bp | CTTATAGCTCCCAGAATACATGTGCTCTATGCCCTTCCATTTCTGCCTATCACGCGCAACATCAGCATTTaGTTCCGGTGCCAGAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LIAPRIHVLYALPFLPITRNISI*FRCQKG Trigger: GCCTTTCTGGCACCGGAAGCAAATGCTGATGTTGCG...CGTGATAGGCAGAAATGGAAGGGCATAGAGCACATGTATTCTGGGAGCTATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR CCA 90 bp | GCTGTACCAGAGGTTGAATTTGGAGACCTTACACTCACCACAGGGTTACATTCCTGCCCAGGATCTCCTTaGGCTCATAGTTCTCGTAGA | + |
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Preference number: 4 (lower is better) Translates to: AVPEVEFGDLTLTTGLHSCPGSP*AHSSRR Trigger: TCTACGAGAACTATGAGCCCAAGGAGATCCTGGGCA...GGAATGTAACCCTGTGGTGAGTGTAAGGTCTCCAAATTCAACCTCTGGTACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR CCA 90 bp | GCTCCCAGAATACATGTGCTCTATGCCCTTCCATTTCTGCCTATCACGGTCTCATCTGGTGAGCCAAACTaGTATTTGCCGTCCATGATC | + |
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Preference number: 4 (lower is better) Translates to: APRIHVLYALPFLPITVSSGEPN*YLPSMI Trigger: GATCATGGACGGCAAATACCAGTTTGGCTCACCAGA...TGAGACCGTGATAGGCAGAAATGGAAGGGCATAGAGCACATGTATTCTGGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR TCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATTGTCCTTCAGCTGTATaGTGTTGGGGTGTCCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFRHTRRGHCPSAV*CWGVPR Trigger: TCTCGGGACACCCCAACATCATACAGCTGAAGGACA...ATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR GCA 90 bp | CTTACACTCACCACAGGGTTACATTCCCAGCCTCATTTTTATTTTGAAATAAGCAAAGTCTGTGCAGAATaGGAGTCAGGGAGGGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: LTLTTGLHSQPHFYFEISKVCAE*ESGRAS Trigger: TGACGCCCTCCCTGACTCGCATTCTGCACAGACTTT...GCTTATTTCAAAATAAAAATGAGGCTGGGAATGTAACCCTGTGGTGAGTGTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR TCA 90 bp | ATTTTAGCTGTACCAGAGGTTGAATTTGGAGACCTTACACTCACCACAGGGTTAAAAACCCGAAGTCTGTaGGCTTTATATTCATGTTGT | + |
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Preference number: 4 (lower is better) Translates to: ILAVPEVEFGDLTLTTGLKTRSL*ALYSCC Trigger: ACAACATGAATATAAAGCTCACAGACTTCGGGTTTT...TAACCCTGTGGTGAGTGTAAGGTCTCCAAATTCAACCTCTGGTACAGCTAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS CCA 90 bp | GTGATGTCAATGATTTTCACTGCGTATTCCTGGCATGTGGGTTTGTaGATGCAGCGCCTGACCACACTGCTGACTCCCCTGCCCAGGATC | + |
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Preference number: 5 (lower is better) Translates to: VMSMIFTAYSWHVGL*MQRLTTLLTPLPRI Trigger: GATCCTGGGCAGGGGAGTCAGCAGTGTGGTCAGGCGCTGCATCCACAAACCCACATGCCAGGAATACGCAGTGAAAATCATTGACATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026617.13 ENSMUST00000140667.2 |
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| CDS CCA 90 bp | GGCCAGATAACTGGGAGTCCCACAAACCTCTCGGAGCTTCTCTCCTaGCTGCAGCTGGCAGGAAAACCCGAAGTCTGTGAGCTTTATATT | + |
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Preference number: 5 (lower is better) Translates to: GQITGSPTNLSELLS*LQLAGKPEVCELYI Trigger: AATATAAAGCTCACAGACTTCGGGTTTTCCTGCCAGCTGCAGCCAGGAGAGAAGCTCCGAGAGGTTTGTGGGACTCCCAGTTATCTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026617.13 ENSMUST00000154932.3 |
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| CDS CCA 90 bp | CTGGGAGTCCCACAAACCTCTCGGAGCTTCTCTCCTGGCTGCAGCTaGCAGGAAAACCCGAAGTCTGTGAGCTTTATATTCATGTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: LGVPQTSRSFSPGCS*QENPKSVSFIFMLS Trigger: TGACAACATGAATATAAAGCTCACAGACTTCGGGTTTTCCTGCCAGCTGCAGCCAGGAGAGAAGCTCCGAGAGGTTTGTGGGACTCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026617.13 ENSMUST00000154932.3 |
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| CDS-3UTR CAA 90 bp | GGCCACCTATTCCTTTGCAGAAGGCTACTTGGGGCATCCTCTTCTCACAAGTCCTGGACAATGTTGAGTTaGTGCAGGGTACAGATCACC | + |
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Preference number: 5 (lower is better) Translates to: GHLFLCRRLLGASSSHKSWTMLS*CRVQIT Trigger: GGTGATCTGTACCCTGCACAAACTCAACATTGTCCA...GGACTTGTGAGAAGAGGATGCCCCAAGTAGCCTTCTGCAAAGGAATAGGTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR CAA 90 bp | ATTTTAGCTGTACCAGAGGTTGAATTTGGAGACCTTACACTCACCACAGGGTTACCGCAACATCAGCATTaGCTTCCGGTGCCAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: ILAVPEVEFGDLTLTTGLPQHQH*LPVPER Trigger: CCTTTCTGGCACCGGAAGCAAATGCTGATGTTGCGG...TAACCCTGTGGTGAGTGTAAGGTCTCCAAATTCAACCTCTGGTACAGCTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS-3UTR CAA 90 bp | TTAGCTGTACCAGAGGTTGAATTTGGAGACCTTACACTCACCACAGGGTTACATTCCCGATGGACAATGTaGAGTTTGTGCAGGGTACAG | + |
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Preference number: 5 (lower is better) Translates to: LAVPEVEFGDLTLTTGLHSRWTM*SLCRVQ Trigger: CTGTACCCTGCACAAACTCAACATTGTCCATCGGGA...ATGTAACCCTGTGGTGAGTGTAAGGTCTCCAAATTCAACCTCTGGTACAGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026617.13 |
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| CDS CCA 72 bp | ACTGGGAGTCCCACAAACCTCTCGGAGCTTCTCTCCTaGCTGCAGCTGGCAGGAAAACCCGAAGTCTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: TGSPTNLSELLS*LQLAGKPEVCE Trigger: CTCACAGACTTCGGGTTTTCCTGCCAGCTGCAGCCAGGAGAGAAGCTCCGAGAGGTTTGTGGGACTCCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026617.13 ENSMUST00000154932.3 |
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| CDS CCA 72 bp | ATGATTTTCACTGCGTATTCCTGGCATGTGGGTTTGTaGATGCAGCGCCTGACCACACTGCTGACTCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: MIFTAYSWHVGL*MQRLTTLLTPL Trigger: CAGGGGAGTCAGCAGTGTGGTCAGGCGCTGCATCCACAAACCCACATGCCAGGAATACGCAGTGAAAATCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026617.13 ENSMUST00000140667.2 |
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| CDS CCA 72 bp | CCACAAACCTCTCGGAGCTTCTCTCCTGGCTGCAGCTaGCAGGAAAACCCGAAGTCTGTGAGCTTTATATTC | + |
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Preference number: 6 (lower is better) Translates to: PQTSRSFSPGCS*QENPKSVSFIF Trigger: GAATATAAAGCTCACAGACTTCGGGTTTTCCTGCCAGCTGCAGCCAGGAGAGAAGCTCCGAGAGGTTTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026617.13 ENSMUST00000154932.3 |
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| CDS TCA 72 bp | AGAAAGTGTTGGTCTCGTAAGTGTCCTTCAGCTGTATaGTGTTGGGGTGTCCCGAGACCTTCTGCAGGATGT | + |
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Preference number: 6 (lower is better) Translates to: RKCWSRKCPSAV*CWGVPRPSAGC Trigger: ACATCCTGCAGAAGGTCTCGGGACACCCCAACATCATACAGCTGAAGGACACTTACGAGACCAACACTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026617.13 ENSMUST00000140667.2 |
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