Pregenerated sensors for PHKB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036879Ensembl transcript IDs: ENSMUST00000053771.14, ENSMUST00000160611.8, ENSMUST00000160731.2, ENSMUST00000161850.8, ENSMUST00000162464.3, ENSMUST00000162981.2
Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCCGAGTGCTCCAGCTCATGGGTCCGTCCCTTGTCATCATCAATaGGCCTGTATGCTAGCGCCAAGGCCCAGGCACCCGCAGCACAGT | + |
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Preference number: 1 (lower is better) Translates to: WPSAPAHGSVPCHHQ*ACMLAPRPRHPQHS Trigger: ACTGTGCTGCGGGTGCCTGGGCCTTGGCGCTAGCATACAGGCGCATTGATGATGACAAGGGACGGACCCATGAGCTGGAGCACTCGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162981.2 |
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| 3UTR GCA 90 bp | GCTAGCGCCAAGGCCCAGGCACCCGCAGCACAGTACAGACTCTCGTaGACTTTGGACTTCTCTTCTCCACCACATGTTTTAGTAGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: ASAKAQAPAAQYRLS*TLDFSSPPHVLVGK Trigger: CTTTCCTACTAAAACATGTGGTGGAGAAGAGAAGTCCAAAGTGCACGAGAGTCTGTACTGTGCTGCGGGTGCCTGGGCCTTGGCGCTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162981.2 |
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| 3UTR CCA 90 bp | GGCCGTTTGCTGCTTCTCTATGTTTATGTGGTGCCTGGCCCCTTCTaGGAAGGTTTCTGCTGCTTTAGGAGTCCAGCCTCCCTTGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: GRLLLLYVYVVPGPF*EGFCCFRSPASLAS Trigger: AGAAGCAAGGGAGGCTGGACTCCTAAAGCAGCAGAAACCTTCCCAGAAGGGGCCAGGCACCACATAAACATAGAGAAGCAGCAAACGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR CCA 90 bp | CAGCCTGCCGCATGTAGCAGTAGAGAATTCCTCTCATACACTTTATaGCCGAGTGCTCCAGCTCATGGGTCCGTCCCTTGTCATCATCAA | + |
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Preference number: 1 (lower is better) Translates to: QPAACSSREFLSYTL*PSAPAHGSVPCHHQ Trigger: TTGATGATGACAAGGGACGGACCCATGAGCTGGAGCACTCGGCCATAAAGTGTATGAGAGGAATTCTCTACTGCTACATGCGGCAGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162981.2 |
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| 3UTR CCA 90 bp | TCCAGAAGAGTAAAGCTTCAACAAGCAGCAAGGCAGCAGTCACAGTaGACTGTGAGTGAGTGTGCTCTATGGAGTGTGCATAGAAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: SRRVKLQQAARQQSQ*TVSECALWSVHRKE Trigger: CTCTTTTCTATGCACACTCCATAGAGCACACTCACTCACAGTCCACTGTGACTGCTGCCTTGCTGCTTGTTGAAGCTTTACTCTTCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
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| 3UTR TCA 90 bp | ATTTATATGCCACTTGTAATATGCTTTCTGGGTTGCCCTAGCCTTTaGAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGA | + |
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Preference number: 1 (lower is better) Translates to: IYMPLVICFLGCPSL*SIPFSLGVLSHPGR Trigger: TCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGGCTAGGGCAACCCAGAAAGCATATTACAAGTGGCATATAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
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| 3UTR GCA 90 bp | GGGTTCCGCTTGATTTCAATCATTGCTTACCATTCGAATGCCACCTaGATGCAAAGGTCCAATCATGACAAACAGAATACAGCACCCACC | + |
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Preference number: 1 (lower is better) Translates to: GFRLISIIAYHSNAT*MQRSNHDKQNTAPT Trigger: GGTGGGTGCTGTATTCTGTTTGTCATGATTGGACCTTTGCATGCAGGTGGCATTCGAATGGTAAGCAATGATTGAAATCAAGCGGAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR GCA 90 bp | AACCAACAGAGCTTGAGTGCAGTTCGGTACTACCATTGTTATATTTaGTTCCTCTTTCCCAGACACCAAAGTCAGGAACACGGTAAACTC | + |
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Preference number: 1 (lower is better) Translates to: NQQSLSAVRYYHCYI*FLFPRHQSQEHGKL Trigger: GAGTTTACCGTGTTCCTGACTTTGGTGTCTGGGAAAGAGGAAGCAAATATAACAATGGTAGTACCGAACTGCACTCAAGCTCTGTTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
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| 3UTR GCA 90 bp | GTTCCAACAGACGTTGATTGTACTATAAACTTAGCACAGAGAACCTaGCAGTGTGACAGAGAAGGCTTTAGATCAGGTTTAAGGCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: VPTDVDCTINLAQRT*QCDREGFRSGLRLV Trigger: GACAAGCCTTAAACCTGATCTAAAGCCTTCTCTGTCACACTGGCAGGTTCTCTGTGCTAAGTTTATAGTACAATCAACGTCTGTTGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR TCA 90 bp | AGCATCAGCCCTTGCCAGGCTTGTTCTAATACAGGAAGGTCAAAATaGAGTCTAAAGAAGCGAAGACTCAGAATTTTGATGGAATATTTG | + |
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Preference number: 1 (lower is better) Translates to: SISPCQACSNTGRSK*SLKKRRLRILMEYL Trigger: CAAATATTCCATCAAAATTCTGAGTCTTCGCTTCTTTAGACTTCATTTTGACCTTCCTGTATTAGAACAAGCCTGGCAAGGGCTGATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR CCA 90 bp | TTTCAGGAATCTTCAAATGTTCCTGAAGAAAATGAGTCCAGTGCTTaGCCCACAATGCTGAGCTTTCTCTTACTCATTCTCTTCCAAAAA | + |
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Preference number: 1 (lower is better) Translates to: FQESSNVPEENESSA*PTMLSFLLLILFQK Trigger: TTTTTGGAAGAGAATGAGTAAGAGAAAGCTCAGCATTGTGGGCCAAGCACTGGACTCATTTTCTTCAGGAACATTTGAAGATTCCTGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
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| 3UTR TCA 90 bp | AATAAATTTTGCATTTCACAATTTAAAAAGCTGACGCACAGTTGCTaGTTTCGAATGCTTTCAAGCAGCAGAAGAAAGCTCCAAACTTTG | + |
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Preference number: 1 (lower is better) Translates to: NKFCISQFKKLTHSC*FRMLSSSRRKLQTL Trigger: CAAAGTTTGGAGCTTTCTTCTGCTGCTTGAAAGCATTCGAAATCAGCAACTGTGCGTCAGCTTTTTAAATTGTGAAATGCAAAATTTATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR CAA 90 bp | CTCATACACTTTATGGCCGAGTGCTCCAGCTCATGGGTCCGTCCCTaGTCATCATCAATGCGCCTGTATGCTAGCGCCAAGGCCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: LIHFMAECSSSWVRP*SSSMRLYASAKAQA Trigger: TGCCTGGGCCTTGGCGCTAGCATACAGGCGCATTGATGATGACAAGGGACGGACCCATGAGCTGGAGCACTCGGCCATAAAGTGTATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162981.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTCCGTCCCTTGTCATCATCAATGCGCCTGTATGCTAGCGCCAAGGCCCAGGGACTCTCGTGCACTTTaGACTTCTCTTCTCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: GSVPCHHQCACMLAPRPRDSRAL*TSLLHH Trigger: GTGGTGGAGAAGAGAAGTCCAAAGTGCACGAGAGTC...CCTGGGCCTTGGCGCTAGCATACAGGCGCATTGATGATGACAAGGGACGGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162981.2 |
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| 3UTR CAA 90 bp | GCCAAGGCCCAGGCACCCGCAGCACAGTACAGACTCTCGTGCACTTaGGACTTCTCTTCTCCACCACATGTTTTAGTAGGAAAGAGACCG | + |
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Preference number: 2 (lower is better) Translates to: AKAQAPAAQYRLSCT*DFSSPPHVLVGKRP Trigger: CGGTCTCTTTCCTACTAAAACATGTGGTGGAGAAGAGAAGTCCAAAGTGCACGAGAGTCTGTACTGTGCTGCGGGTGCCTGGGCCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162981.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGGGAAGGTTTCTGCTGCTTTAGGAGTCCAGCCTCCCTTGCTTCTCATTCACTCCTCCAGTACCTTGTaGGTCCCAGGACAGCATCAG | + |
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Preference number: 2 (lower is better) Translates to: SGKVSAALGVQPPLLLIHSSSTL*VPGQHQ Trigger: CTGATGCTGTCCTGGGACTCACAAGGTACTGGAGGA...GTGAATGAGAAGCAAGGGAGGCTGGACTCCTAAAGCAGCAGAAACCTTCCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR-3UTR TCA 90 bp | TTCCTCTCATACACTTTATGGCCGAGTGCTCCAGCTCATGGGTCCGTCCCTTGTCCGGTAGTTGGACTTTaGTACATCAGCATCGTTGAC | + |
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Preference number: 2 (lower is better) Translates to: FLSYTLWPSAPAHGSVPCPVVGL*YISIVD Trigger: GTCAACGATGCTGATGTATCAAAGTCCAACTACCGG...ACAAGGGACGGACCCATGAGCTGGAGCACTCGGCCATAAAGTGTATGAGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162981.2 |
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| 3UTR-3UTR CCA 90 bp | TATGCTGCTTCCAGACTCTTTAGTTTAGTTGGGATGGGTCTCTGCTGCCGGGGCCCAGCTCTGTCTGACTaGCACTTCTGTATTCCTATA | + |
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Preference number: 2 (lower is better) Translates to: YAASRLFSLVGMGLCCRGPALSD*HFCIPI Trigger: TATAGGAATACAGAAGTGCCAGTCAGACAGAGCTGG...GCCCCGGCAGCAGAGACCCATCCCAACTAAACTAAAGAGTCTGGAAGCAGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR-3UTR TCA 90 bp | TATGCTGCTTCCAGACTCTTTAGTTTAGTTGGGATGGGTCTCTGCTGCCGGGGCAGCAGACATTGCTTCTaGTGGAGGAACATCAAGATT | + |
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Preference number: 2 (lower is better) Translates to: YAASRLFSLVGMGLCCRGSRHCF*WRNIKI Trigger: AATCTTGATGTTCCTCCATCAGAAGCAATGTCTGCT...GCCCCGGCAGCAGAGACCCATCCCAACTAAACTAAAGAGTCTGGAAGCAGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR-3UTR TCA 90 bp | AGGCAGGTCAGATTCCAGAAGAGTAAAGCTTCAACAAGCAGCAAGGCAGCAGTCCTTGGCCCACAATGCTaGGCTTTCTCTTACTCATTC | + |
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Preference number: 2 (lower is better) Translates to: RQVRFQKSKASTSSKAAVLGPQC*AFSYSF Trigger: GAATGAGTAAGAGAAAGCTCAGCATTGTGGGCCAAG...GACTGCTGCCTTGCTGCTTGTTGAAGCTTTACTCTTCTGGAATCTGACCTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGGGAAGGTTTCTGCTGCTTTAGGAGTCCAGCCTCCCTTGCTTCTCATTCACAGACAGCGTTTCCCTTaGAACTTTGCTCAGCTAATC | + |
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Preference number: 2 (lower is better) Translates to: SGKVSAALGVQPPLLLIHRQRFP*NFAQLI Trigger: GATTAGCTGAGCAAAGTTGCAAGGGAAACGCTGTCT...GTGAATGAGAAGCAAGGGAGGCTGGACTCCTAAAGCAGCAGAAACCTTCCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR-3UTR CCA 90 bp | AGTCCCAGGACAGCATCAGCCCTTGCCAGGCTTGTTCTAATACAGGAAGGTCAACACAAAAGGCACAGCTaGAAAACCATCACCTATGCT | + |
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Preference number: 2 (lower is better) Translates to: SPRTASALARLVLIQEGQHKRHS*KTITYA Trigger: AGCATAGGTGATGGTTTTCCAGCTGTGCCTTTTGTG...TTGACCTTCCTGTATTAGAACAAGCCTGGCAAGGGCTGATGCTGTCCTGGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR-3UTR TCA 90 bp | TCTGGGAAGGTTTCTGCTGCTTTAGGAGTCCAGCCTCCCTTGCTTCTCATTCACCTTGGGGTGGTAAGTTaGATGTATTCAGTTATTCAG | + |
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Preference number: 2 (lower is better) Translates to: SGKVSAALGVQPPLLLIHLGVVS*MYSVIQ Trigger: CTGAATAACTGAATACATTCAACTTACCACCCCAAG...GTGAATGAGAAGCAAGGGAGGCTGGACTCCTAAAGCAGCAGAAACCTTCCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR-3UTR GCA 90 bp | ATTTTTAAGGCTGGATTGTATCATGATTCCCAGCTCTGTCTGACTGGCACTTCTGAAAACCATCACCTATaGTCCCTACAGGACCAGCCG | + |
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Preference number: 2 (lower is better) Translates to: IFKAGLYHDSQLCLTGTSENHHL*SLQDQP Trigger: CGGCTGGTCCTGTAGGGAGCATAGGTGATGGTTTTC...AGAAGTGCCAGTCAGACAGAGCTGGGAATCATGATACAATCCAGCCTTAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR-3UTR TCA 90 bp | AATGTTCCTGAAGAAAATGAGTCCAGTGCTTGGCCCACAATGCTGAGCTTTCTCGATTATCTGGAGGCCTaGGGAAATCATTTCTACCAG | + |
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Preference number: 2 (lower is better) Translates to: NVPEENESSAWPTMLSFLDYLEA*GNHFYQ Trigger: CTGGTAGAAATGATTTCCTCAGGCCTCCAGATAATC...GAGAAAGCTCAGCATTGTGGGCCAAGCACTGGACTCATTTTCTTCAGGAACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTGGACTGTGAGTGAGTGTGCTCTATGGAGTGTGCATAGAAAAGAGGGGTTCCATACAATGTCACATTaGTCTGTCGCATTTCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: QWTVSECALWSVHRKEGFHTMSH*SVAFQE Trigger: TTCCTGAAATGCGACAGAGCAATGTGACATTGTATG...GAACCCCTCTTTTCTATGCACACTCCATAGAGCACACTCACTCACAGTCCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
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| 3UTR-3UTR CCA 90 bp | TATCAGCCTGCCGCATGTAGCAGTAGAGAATTCCTCTCATACACTTTATGGCCGAAAGAGACCGGTAGTTaGACTTTGATACATCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: YQPAACSSREFLSYTLWPKETGS*TLIHQH Trigger: ATGCTGATGTATCAAAGTCCAACTACCGGTCTCTTT...CGGCCATAAAGTGTATGAGAGGAATTCTCTACTGCTACATGCGGCAGGCTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162981.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTCAGATTCCAGAAGAGTAAAGCTTCAACAAGCAGCAAGGCAGCAGTCACAGGTAAAGGAGAAAGAGTaGGACTGCATTTATCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: RSDSRRVKLQQAARQQSQVKEKE*DCIYQL Trigger: TAACTGATAAATGCAGTCTCACTCTTTCTCCTTTAC...CTGTGACTGCTGCCTTGCTGCTTGTTGAAGCTTTACTCTTCTGGAATCTGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
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| 3UTR-3UTR TCA 90 bp | TTAAATAGTAGGCATGGCCTCAGGTACTTCAAAGGAAGCAACGCCATGACAAAATGCACCATACCTCTGTaGCTAAGAACACTAGTAACC | + |
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Preference number: 2 (lower is better) Translates to: LNSRHGLRYFKGSNAMTKCTIPL*LRTLVT Trigger: GGTTACTAGTGTTCTTAGTCACAGAGGTATGGTGCA...TTTTGTCATGGCGTTGCTTCCTTTGAAGTACCTGAGGCCATGCCTACTATTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
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| 3UTR-3UTR TCA 90 bp | AGATTGAAATGCCTGCTTAGGCAGGTCAGATTCCAGAAGAGTAAAGCTTCAACAGCCTGGCAGTCTTCTTaGGAAACACTAGAAGACTTA | + |
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Preference number: 2 (lower is better) Translates to: RLKCLLRQVRFQKSKASTAWQSS*ETLEDL Trigger: TAAGTCTTCTAGTGTTTCTCAAGAAGACTGCCAGGC...TGTTGAAGCTTTACTCTTCTGGAATCTGACCTGCCTAAGCAGGCATTTCAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
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| 3UTR-3UTR TCA 90 bp | TATCCATTTAGTAACATTCAGCACAGAGTTATGTTAAAAACAGCTACGCTCTTGAGTCACAGTGGACTGTaGGTGAGTGTGCTCTATGGA | + |
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Preference number: 2 (lower is better) Translates to: YPFSNIQHRVMLKTATLLSHSGL*VSVLYG Trigger: TCCATAGAGCACACTCACTCACAGTCCACTGTGACT...CAAGAGCGTAGCTGTTTTTAACATAACTCTGTGCTGAATGTTACTAAATGGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTGCTCTGGAAAAGCAGTTGAATTTGATATTCAGTCAGGAGTTCCAACAGACCTAATTTTGTTTTTCTaGTGTGTGTTACACGTCTCG | + |
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Preference number: 2 (lower is better) Translates to: QCSGKAVEFDIQSGVPTDLILFF*CVLHVS Trigger: CGAGACGTGTAACACACATCAGAAAAACAAAATTAG...GTCTGTTGGAACTCCTGACTGAATATCAAATTCAACTGCTTTTCCAGAGCACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR-3UTR TCA 90 bp | TTTGATATTCAGTCAGGAGTTCCAACAGACGTTGATTGTACTATAAACTTAGCAGCAAAGGTCCAATCATaGCAAACAGAATACAGCACC | + |
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Preference number: 2 (lower is better) Translates to: FDIQSGVPTDVDCTINLAAKVQS*QTEYST Trigger: GGTGCTGTATTCTGTTTGTCATGATTGGACCTTTGC...TGCTAAGTTTATAGTACAATCAACGTCTGTTGGAACTCCTGACTGAATATCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR-3UTR GCA 90 bp | ATTGCTTCTGATGGAGGAACATCAAGATTTATTGATCATCCCAAAATATCTTGCCATTCGAATGCCACCTaGATGCAAAGGTCCAATCAT | + |
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Preference number: 2 (lower is better) Translates to: IASDGGTSRFIDHPKISCHSNAT*MQRSNH Trigger: ATGATTGGACCTTTGCATGCAGGTGGCATTCGAATG...GCAAGATATTTTGGGATGATCAATAAATCTTGATGTTCCTCCATCAGAAGCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR CAA 90 bp | CTTTGCATATGTAATAGGAAGCTAACTGCTCATTCAGAAACAGACTaGCAAGTGATGTCTATTTTAACTAAGACAGCGTTTCCCTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: LCICNRKLTAHSETD*QVMSILTKTAFPLQ Trigger: TTGCAAGGGAAACGCTGTCTTAGTTAAAATAGACATCACTTGCAAGTCTGTTTCTGAATGAGCAGTTAGCTTCCTATTACATATGCAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR CAA 90 bp | AAAGTCAGGAACACGGTAAACTCTCTCTACACAAAATACAAGGTTTaGAATAAAAGAAACCTCATCCGTGTTATAGATTATCTGGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: KVRNTVNSLYTKYKV*NKRNLIRVIDYLEA Trigger: GGCCTCCAGATAATCTATAACACGGATGAGGTTTCTTTTATTCAAAACCTTGTATTTTGTGTAGAGAGAGTTTACCGTGTTCCTGACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGATATTCAGTCAGGAGTTCCAACAGACGTTGATTGTACTATAAACTTAGCAGTTGCTGATTTCGAATaGTTTCAAGCAGCAGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: FDIQSGVPTDVDCTINLAVADFE*FQAAEE Trigger: TTCTTCTGCTGCTTGAAAGCATTCGAAATCAGCAAC...TGCTAAGTTTATAGTACAATCAACGTCTGTTGGAACTCCTGACTGAATATCAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR-3UTR GCA 90 bp | ATTGCTTCTGATGGAGGAACATCAAGATTTATTGATCATCCCAAAATATCTTGCCTTGATTTCAATCATTaGTTACCATTCGAATGCCAC | + |
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Preference number: 2 (lower is better) Translates to: IASDGGTSRFIDHPKISCLDFNH*LPFECH Trigger: GTGGCATTCGAATGGTAAGCAATGATTGAAATCAAG...GCAAGATATTTTGGGATGATCAATAAATCTTGATGTTCCTCCATCAGAAGCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR GCA 72 bp | GCTCCAGCTCATGGGTCCGTCCCTTGTCATCATCAATaGGCCTGTATGCTAGCGCCAAGGCCCAGGCACCCG | + |
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Preference number: 3 (lower is better) Translates to: APAHGSVPCHHQ*ACMLAPRPRHP Trigger: CGGGTGCCTGGGCCTTGGCGCTAGCATACAGGCGCATTGATGATGACAAGGGACGGACCCATGAGCTGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162981.2 |
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| 3UTR GCA 72 bp | TATGTGGTGCCTGGCCCCTTCTGGGAAGGTTTCTGCTaGTTTAGGAGTCCAGCCTCCCTTGCTTCTCATTCA | + |
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Preference number: 3 (lower is better) Translates to: YVVPGPFWEGFC*FRSPASLASHS Trigger: TGAATGAGAAGCAAGGGAGGCTGGACTCCTAAAGCAGCAGAAACCTTCCCAGAAGGGGCCAGGCACCACATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR CCA 72 bp | CTGCTTCTCTATGTTTATGTGGTGCCTGGCCCCTTCTaGGAAGGTTTCTGCTGCTTTAGGAGTCCAGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: LLLYVYVVPGPF*EGFCCFRSPAS Trigger: GGAGGCTGGACTCCTAAAGCAGCAGAAACCTTCCCAGAAGGGGCCAGGCACCACATAAACATAGAGAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR-3UTR CAA 90 bp | AGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAACACTAAGGCAGCACCACAGAGCTaGTCACACTCCTCGTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: SIPFSLGVLSHPGRKNTKAAPQS*SHSSSF Trigger: GAAGGACGAGGAGTGTGACAAGCTCTGTGGTGCTGC...CTTAGTGTTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
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| 3UTR GCA 72 bp | AAGGCCCAGGCACCCGCAGCACAGTACAGACTCTCGTaGACTTTGGACTTCTCTTCTCCACCACATGTTTTA | + |
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Preference number: 3 (lower is better) Translates to: KAQAPAAQYRLS*TLDFSSPPHVL Trigger: TAAAACATGTGGTGGAGAAGAGAAGTCCAAAGTGCACGAGAGTCTGTACTGTGCTGCGGGTGCCTGGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162981.2 |
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| 3UTR-3UTR CAA 90 bp | TATCAGCCTGCCGCATGTAGCAGTAGAGAATTCCTCTCATACACTTTATGGCCGTCATGGGTCCGTCCCTaGTCATCATCAATGCGCCTG | + |
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Preference number: 3 (lower is better) Translates to: YQPAACSSREFLSYTLWPSWVRP*SSSMRL Trigger: CAGGCGCATTGATGATGACAAGGGACGGACCCATGA...CGGCCATAAAGTGTATGAGAGGAATTCTCTACTGCTACATGCGGCAGGCTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162981.2 |
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| 3UTR TCA 72 bp | CTAGCCTTTGAAGTATTCCCTTCTCACTTGGAGTACTaGGCCACCCAGGGCGAAAGAACACTAAGGAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: LAFEVFPSHLEY*ATQGERTLRSS Trigger: GCTGCTCCTTAGTGTTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
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| 3UTR GCA 72 bp | ATGAGGGTCATAGACAAACTCCTGCAGGCCGTTTGCTaGTTCTCTATGTTTATGTGGTGCCTGGCCCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: MRVIDKLLQAVC*FSMFMWCLAPS Trigger: AGAAGGGGCCAGGCACCACATAAACATAGAGAAGCAGCAAACGGCCTGCAGGAGTTTGTCTATGACCCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| 3UTR CCA 72 bp | AAACCAAGCCAATCACTACCAGCATCACAGCAGACCTaGAGAGTCAGTGCCACTCCCTTTTCTCCTTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KPSQSLPASQQT*RVSATPFSPLQ Trigger: CTGCAAAGGAGAAAAGGGAGTGGCACTGACTCTCCAGGTCTGCTGTGATGCTGGTAGTGATTGGCTTGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| 3UTR CCA 72 bp | GCATGTAGCAGTAGAGAATTCCTCTCATACACTTTATaGCCGAGTGCTCCAGCTCATGGGTCCGTCCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ACSSREFLSYTL*PSAPAHGSVPC Trigger: ACAAGGGACGGACCCATGAGCTGGAGCACTCGGCCATAAAGTGTATGAGAGGAATTCTCTACTGCTACATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162981.2 |
||
| 3UTR GCA 72 bp | AATATGAGGGTCATAGACAAACTCCTGCAGGCCGTTTaGTGCTTCTCTATGTTTATGTGGTGCCTGGCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: NMRVIDKLLQAV*CFSMFMWCLAP Trigger: AGGGGCCAGGCACCACATAAACATAGAGAAGCAGCAAACGGCCTGCAGGAGTTTGTCTATGACCCTCATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| 3UTR CCA 72 bp | GTAAAGCTTCAACAAGCAGCAAGGCAGCAGTCACAGTaGACTGTGAGTGAGTGTGCTCTATGGAGTGTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VKLQQAARQQSQ*TVSECALWSVH Trigger: ATGCACACTCCATAGAGCACACTCACTCACAGTCCACTGTGACTGCTGCCTTGCTGCTTGTTGAAGCTTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| 3UTR TCA 72 bp | TTCAACAAGCAGCAAGGCAGCAGTCACAGTGGACTGTaGGTGAGTGTGCTCTATGGAGTGTGCATAGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: FNKQQGSSHSGL*VSVLYGVCIEK Trigger: CTTTTCTATGCACACTCCATAGAGCACACTCACTCACAGTCCACTGTGACTGCTGCCTTGCTGCTTGTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGGACTGTGAGTGAGTGTGCTCTATGGAGTGTGCATAGAAAAGAGGGGTTCTGCCTGGCAGTCTTCTaGAGAAACACTAGAAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: QWTVSECALWSVHRKEGFCLAVF*RNTRRL Trigger: AAGTCTTCTAGTGTTTCTCAAGAAGACTGCCAGGCA...GAACCCCTCTTTTCTATGCACACTCCATAGAGCACACTCACTCACAGTCCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATCACTACCAGCATCACAGCAGACCTGGAGAGTCAGTGCCACTCCCTTTTCTCTACCATTGTTATATTaGCTTCCTCTTTCCCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: QSLPASQQTWRVSATPFSLPLLY*LPLSQT Trigger: TGTCTGGGAAAGAGGAAGCAAATATAACAATGGTAG...AGAAAAGGGAGTGGCACTGACTCTCCAGGTCTGCTGTGATGCTGGTAGTGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGGACTGTGAGTGAGTGTGCTCTATGGAGTGTGCATAGAAAAGAGGGGTTCACAACCTACCCCAATTaGTTAACTTCCTTATTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: QWTVSECALWSVHRKEGFTTYPN*LTSLLG Trigger: GCCCAATAAGGAAGTTAACAAATTGGGGTAGGTTGT...GAACCCCTCTTTTCTATGCACACTCCATAGAGCACACTCACTCACAGTCCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| 3UTR TCA 72 bp | CCATTCGAATGCCACCTGCATGCAAAGGTCCAATCATaGCAAACAGAATACAGCACCCACCACACTAACACA | + |
|
Preference number: 3 (lower is better) Translates to: PFECHLHAKVQS*QTEYSTHHTNT Trigger: TGTGTTAGTGTGGTGGGTGCTGTATTCTGTTTGTCATGATTGGACCTTTGCATGCAGGTGGCATTCGAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| 3UTR TCA 72 bp | CCACTTGTAATATGCTTTCTGGGTTGCCCTAGCCTTTaGAGTATTCCCTTCTCACTTGGAGTACTGAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PLVICFLGCPSL*SIPFSLGVLSH Trigger: GTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGGCTAGGGCAACCCAGAAAGCATATTACAAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| 3UTR CCA 72 bp | GGGGCGGTGCCCACCCCGTGGTATCTATTTAATACTTaGGGTGGTAAGTTGAATGTATTCAGTTATTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GAVPTPWYLFNT*GGKLNVFSYSA Trigger: TGCTGAATAACTGAATACATTCAACTTACCACCCCAAGTATTAAATAGATACCACGGGGTGGGCACCGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| 3UTR GCA 72 bp | ACTAGGTCAGGAAGGTGCTTATGTGTCATGAGTGACTaGTTTCAGAATTCCTCTGAGCCCAATGTACACGTA | + |
|
Preference number: 3 (lower is better) Translates to: TRSGRCLCVMSD*FQNSSEPNVHV Trigger: TACGTGTACATTGGGCTCAGAGGAATTCTGAAAGCAGTCACTCATGACACATAAGCACCTTCCTGACCTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| 3UTR TCA 72 bp | CCTTTTATACTAGGTCAGGAAGGTGCTTATGTGTCATaGGTGACTGCTTTCAGAATTCCTCTGAGCCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: PFILGQEGAYVS*VTAFRIPLSPM Trigger: CATTGGGCTCAGAGGAATTCTGAAAGCAGTCACTCATGACACATAAGCACCTTCCTGACCTAGTATAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| 3UTR TCA 72 bp | GTTGACTGGTTGGTTGGTTGTAGGTTGTGCCTCATCTaGAGAGGCATTTGTGACTGTCCTTTCTTTTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: VDWLVGCRLCLI*RGICDCPFFFH Trigger: ATGGAAAAAGAAAGGACAGTCACAAATGCCTCTTCAGATGAGGCACAACCTACAACCAACCAACCAGTCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| 3UTR GCA 72 bp | AAATCATGGAAACGGGTTCCGCTTGATTTCAATCATTaGTTACCATTCGAATGCCACCTGCATGCAAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: KSWKRVPLDFNH*LPFECHLHAKV Trigger: GACCTTTGCATGCAGGTGGCATTCGAATGGTAAGCAATGATTGAAATCAAGCGGAACCCGTTTCCATGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| 3UTR GCA 72 bp | ACTCTAAACAGCGCCTTTTATACTAGGTCAGGAAGGTaGTTATGTGTCATGAGTGACTGCTTTCAGAATTCC | + |
|
Preference number: 3 (lower is better) Translates to: TLNSAFYTRSGR*LCVMSDCFQNS Trigger: GGAATTCTGAAAGCAGTCACTCATGACACATAAGCACCTTCCTGACCTAGTATAAAAGGCGCTGTTTAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| 3UTR CCA 72 bp | CACACTAACACATCTGTTCACTCACTAATGGCTGTCTaGTTAATGTCAACACAAAAGGCACAGCTGGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: HTNTSVHSLMAV*LMSTQKAQLEN Trigger: GTTTTCCAGCTGTGCCTTTTGTGTTGACATTAACCAGACAGCCATTAGTGAGTGAACAGATGTGTTAGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| 3UTR TCA 72 bp | AGAAACCTCATCCGTGTTATAGATTATCTGGAGGCCTaGGGAAATCATTTCTACCAGGTAAAGGAGAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RNLIRVIDYLEA*GNHFYQVKEKE Trigger: CTCTTTCTCCTTTACCTGGTAGAAATGATTTCCTCAGGCCTCCAGATAATCTATAACACGGATGAGGTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAAATAGTAGGCATGGCCTCAGGTACTTCAAAGGAAGCAACGCCATGACAAAAAGTTCGGTACTACCATaGTTATATTTGCTTCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LNSRHGLRYFKGSNAMTKSSVLP*LYLLPL Trigger: AAGAGGAAGCAAATATAACAATGGTAGTACCGAACT...TTTTGTCATGGCGTTGCTTCCTTTGAAGTACCTGAGGCCATGCCTACTATTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| 3UTR TCA 72 bp | CCTTGCCAGGCTTGTTCTAATACAGGAAGGTCAAAATaGAGTCTAAAGAAGCGAAGACTCAGAATTTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: PCQACSNTGRSK*SLKKRRLRILM Trigger: CATCAAAATTCTGAGTCTTCGCTTCTTTAGACTTCATTTTGACCTTCCTGTATTAGAACAAGCCTGGCAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| 3UTR TCA 72 bp | TGCATTTCACAATTTAAAAAGCTGACGCACAGTTGCTaGTTTCGAATGCTTTCAAGCAGCAGAAGAAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: CISQFKKLTHSC*FRMLSSSRRKL Trigger: GAGCTTTCTTCTGCTGCTTGAAAGCATTCGAAATCAGCAACTGTGCGTCAGCTTTTTAAATTGTGAAATGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| 3UTR GCA 72 bp | TTGATTTCAATCATTGCTTACCATTCGAATGCCACCTaGATGCAAAGGTCCAATCATGACAAACAGAATACA | + |
|
Preference number: 3 (lower is better) Translates to: LISIIAYHSNAT*MQRSNHDKQNT Trigger: TGTATTCTGTTTGTCATGATTGGACCTTTGCATGCAGGTGGCATTCGAATGGTAAGCAATGATTGAAATCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| 3UTR GCA 72 bp | TTATTCAGCAAATATTTGTTGGCACCCATAAGACATTaGAAGCTCATCGAAGATGACAGCAAGATGATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LFSKYLLAPIRH*KLIEDDSKMIS Trigger: TGAGATCATCTTGCTGTCATCTTCGATGAGCTTGCAATGTCTTATGGGTGCCAACAAATATTTGCTGAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| 3UTR GCA 72 bp | ATCATACTGGCAGAACATTTATACCTAAGATTGAAATaGCTGCTTAGGCAGGTCAGATTCCAGAAGAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: IILAEHLYLRLK*LLRQVRFQKSK Trigger: TTTACTCTTCTGGAATCTGACCTGCCTAAGCAGGCATTTCAATCTTAGGTATAAATGTTCTGCCAGTATGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| 3UTR CCA 72 bp | CTTTCTTTTTCCATACCTATTCCCATTACTTCTGTGTaGCTACAAGAAATGACCAATTTTGTTTCCATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSFSIPIPITSV*LQEMTNFVSIS Trigger: AGAAATGGAAACAAAATTGGTCATTTCTTGTAGCCACACAGAAGTAATGGGAATAGGTATGGAAAAAGAAAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGTTTAGTTGGGATGGGTCTCTGCTGCCGGGGCGGTGCCCACCCCGTGGTAATGCCTGGCTCGTGTTaGGCCTCAGGAGCATCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FSLVGMGLCCRGGAHPVVMPGSC*ASGASA Trigger: CGCAGATGCTCCTGAGGCGCAACACGAGCCAGGCAT...TACCACGGGGTGGGCACCGCCCCGGCAGCAGAGACCCATCCCAACTAAACTAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | TTTAGTTTAGTTGGGATGGGTCTCTGCTGCCGGGGCGGTGCCCACCCCGTGGTACCCCAGTGTGCACACTaGAAACAGAGTGAAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: FSLVGMGLCCRGGAHPVVPQCAH*KQSEDM Trigger: CATGTCTTCACTCTGTTTTCAGTGTGCACACTGGGG...TACCACGGGGTGGGCACCGCCCCGGCAGCAGAGACCCATCCCAACTAAACTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | CCAGTACCTTGTGAGTCCCAGGACAGCATCAGCCCTTGCCAGGCTTGTTCTAATCCCAGCAGGATGGTTTaGCCAGCCAGACAACCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVPCESQDSISPCQACSNPSRMV*PARQPQ Trigger: CTGCGGTTGTCTGGCTGGTCAAACCATCCTGCTGGG...ATTAGAACAAGCCTGGCAAGGGCTGATGCTGTCCTGGGACTCACAAGGTACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| 3UTR CAA 72 bp | TTTATGGCCGAGTGCTCCAGCTCATGGGTCCGTCCCTaGTCATCATCAATGCGCCTGTATGCTAGCGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FMAECSSSWVRP*SSSMRLYASAK Trigger: CTTGGCGCTAGCATACAGGCGCATTGATGATGACAAGGGACGGACCCATGAGCTGGAGCACTCGGCCATAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162981.2 |
||
| CDS-3UTR TCA 90 bp | AGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAACACTAAGCCCAGCAGGATGGTTTaGCCAGCCAGACAACCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SIPFSLGVLSHPGRKNTKPSRMV*PARQPQ Trigger: CTGCGGTTGTCTGGCTGGTCAAACCATCCTGCTGGG...CTTAGTGTTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAAATGCCTGGCTCGTGTTaGGCCTCAGGAGCATCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PLKYSLLTWSTEPPRAKEMPGSC*ASGASA Trigger: CGCAGATGCTCCTGAGGCGCAACACGAGCCAGGCAT...TTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR CCA 90 bp | TATGCTGCTTCCAGACTCTTTAGTTTAGTTGGGATGGGTCTCTGCTGCCGGGGCGCCAATGGGCCTATCTaGCCTTCCAGACAGACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YAASRLFSLVGMGLCCRGANGPI*PSRQTQ Trigger: TTGGGTCTGTCTGGAAGGCCAGATAGGCCCATTGGC...GCCCCGGCAGCAGAGACCCATCCCAACTAAACTAAAGAGTCTGGAAGCAGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | TTTAGTTTAGTTGGGATGGGTCTCTGCTGCCGGGGCGGTGCCCACCCCGTGGTAGATCAACATGAACTTTaGCTCCTCCAATTATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSLVGMGLCCRGGAHPVVDQHEL*LLQLFP Trigger: AGGGAATAATTGGAGGAGTCAAAGTTCATGTTGATC...TACCACGGGGTGGGCACCGCCCCGGCAGCAGAGACCCATCCCAACTAAACTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | AGTCCCAGGACAGCATCAGCCCTTGCCAGGCTTGTTCTAATACAGGAAGGTCAACCAGTTCTTGCTGAATaGCTGCCTCCCTCTCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: SPRTASALARLVLIQEGQPVLAE*LPPSHR Trigger: ACGATGAGAGGGAGGCAGTCATTCAGCAAGAACTGG...TTGACCTTCCTGTATTAGAACAAGCCTGGCAAGGGCTGATGCTGTCCTGGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | TATGGCCGAGTGCTCCAGCTCATGGGTCCGTCCCTTGTCATCATCAATGCGCCTTTGGGACACATGACTTaGGACCAGACCTTAACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YGRVLQLMGPSLVIINAPLGHMT*DQTLTK Trigger: CTTTGTTAAGGTCTGGTCTCAAGTCATGTGTCCCAA...AGGCGCATTGATGATGACAAGGGACGGACCCATGAGCTGGAGCACTCGGCCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162981.2 |
||
| CDS-3UTR GCA 90 bp | TATGCTGCTTCCAGACTCTTTAGTTTAGTTGGGATGGGTCTCTGCTGCCGGGGCTTCTTGCTGAATGACTaGCTCCCTCTCATCGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YAASRLFSLVGMGLCCRGFLLND*LPLIVG Trigger: ACCCACGATGAGAGGGAGGCAGTCATTCAGCAAGAA...GCCCCGGCAGCAGAGACCCATCCCAACTAAACTAAAGAGTCTGGAAGCAGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | TTTAGTTTAGTTGGGATGGGTCTCTGCTGCCGGGGCGGTGCCCACCCCGTGGTAAAAGAGACCGGTAGTTaGACTTTGATACATCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSLVGMGLCCRGGAHPVVKETGS*TLIHQH Trigger: ATGCTGATGTATCAAAGTCCAACTACCGGTCTCTTT...TACCACGGGGTGGGCACCGCCCCGGCAGCAGAGACCCATCCCAACTAAACTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | TGCTGCTTCTCTATGTTTATGTGGTGCCTGGCCCCTTCTGGGAAGGTTTCTGCTGCTGCTTCACTTCACTaGGCGAGAGCTGGTACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CCFSMFMWCLAPSGKVSAAASLH*ARAGTS Trigger: ACTTGTACCAGCTCTCGCCCAGTGAAGTGAAGCAGC...AGCAGAAACCTTCCCAGAAGGGGCCAGGCACCACATAAACATAGAGAAGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | CCACTCCCTTTTCTCCTTTGCAGCTTAGGAAGATCTAGCCGGTCCAAGCTGCTTCCCCAGTGTGCACACTaGAAACAGAGTGAAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: PLPFLLCSLGRSSRSKLLPQCAH*KQSEDM Trigger: CATGTCTTCACTCTGTTTTCAGTGTGCACACTGGGG...AAGCAGCTTGGACCGGCTAGATCTTCCTAAGCTGCAAAGGAGAAAAGGGAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGCTTCTCTATGTTTATGTGGTGCCTGGCCCCTTCTGGGAAGGTTTCTGCTGCAGCATCTGTGTTATaGGAGCGTGATTCTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CCFSMFMWCLAPSGKVSAAASVL*ERDSLG Trigger: ACCCAGAGAATCACGCTCTCATAACACAGATGCTGC...AGCAGAAACCTTCCCAGAAGGGGCCAGGCACCACATAAACATAGAGAAGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | CCTTTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAACCAGTTCTTGCTGAATaGCTGCCTCCCTCTCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: PLKYSLLTWSTEPPRAKEPVLAE*LPPSHR Trigger: ACGATGAGAGGGAGGCAGTCATTCAGCAAGAACTGG...TTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR TCA 90 bp | AGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAACACTAAGTTTTCAGCATGCCGCTaGACAACTCAGGGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIPFSLGVLSHPGRKNTKFSACR*TTQGCW Trigger: CCAACAGCCCTGAGTTGTTCAGCGGCATGCTGAAAA...CTTAGTGTTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGAAGGTTTCTGCTGCTTTAGGAGTCCAGCCTCCCTTGCTTCTCATTCACTCATACTCCATGGCGTaGATGATCCACCCAATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SGKVSAALGVQPPLLLIHSYSMA*MIHPMR Trigger: ACGCATTGGGTGGATCATCCACGCCATGGAGTATGA...GTGAATGAGAAGCAAGGGAGGCTGGACTCCTAAAGCAGCAGAAACCTTCCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | CCAGTACCTTGTGAGTCCCAGGACAGCATCAGCCCTTGCCAGGCTTGTTCTAATATCCACAAATATAACTaGCCAGGAACACCCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVPCESQDSISPCQACSNIHKYN*PGTPLV Trigger: AACCAGGGGTGTTCCTGGTCAGTTATATTTGTGGAT...ATTAGAACAAGCCTGGCAAGGGCTGATGCTGTCCTGGGACTCACAAGGTACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | TCTCTTCCCTGCCCATCAACCACCAGAAGTTACTCTTTCTGCATGGGCTTCATGTGCCTGTTGCGGTTGTaGGCATCGAGATCCACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLPCPSTTRSYSFCMGFMCLLRL*ASRSTN Trigger: ATTTGTGGATCTCGATGCTCACAACCGCAACAGGCA...CATGAAGCCCATGCAGAAAGAGTAACTTCTGGTGGTTGATGGGCAGGGAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | CCAGTACCTTGTGAGTCCCAGGACAGCATCAGCCCTTGCCAGGCTTGTTCTAATGGTCCTGATATTCCTTaGCTTGTTCAAGATTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVPCESQDSISPCQACSNGPDIP*LVQDCL Trigger: GAGGCAATCTTGAACAAGTCAAGGAATATCAGGACC...ATTAGAACAAGCCTGGCAAGGGCTGATGCTGTCCTGGGACTCACAAGGTACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | CCTTTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAAATGACCAGTTCTTGCTaGATGACTGCCTCCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLKYSLLTWSTEPPRAKEMTSSC*MTASLS Trigger: TGAGAGGGAGGCAGTCATTCAGCAAGAACTGGTCAT...TTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR GCA 90 bp | GCTGTCTGGTTAATGTCAACACAAAAGGCACAGCTGGAAAACCATCACCTATGCCACTTTATGGCCGAGTaGTCCAGCTCATGGGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: AVWLMSTQKAQLENHHLCHFMAE*SSSWVR Trigger: ACGGACCCATGAGCTGGAGCACTCGGCCATAAAGTG...GCATAGGTGATGGTTTTCCAGCTGTGCCTTTTGTGTTGACATTAACCAGACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR GCA 90 bp | CCTTTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAATTCTTGCTGAATGACTaGCTCCCTCTCATCGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLKYSLLTWSTEPPRAKEFLLND*LPLIVG Trigger: ACCCACGATGAGAGGGAGGCAGTCATTCAGCAAGAA...TTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR GCA 90 bp | TTGATTTCAATCATTGCTTACCATTCGAATGCCACCTGCATGCAAAGGTCCAATTCCCCGCCCCGGACCTaGAGTTCATACTCCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LISIIAYHSNATCMQRSNSPPRT*SSYSMA Trigger: CGCCATGGAGTATGAACTGCAGGTCCGGGGCGGGGA...ATTGGACCTTTGCATGCAGGTGGCATTCGAATGGTAAGCAATGATTGAAATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR GCA 90 bp | CCAGTACCTTGTGAGTCCCAGGACAGCATCAGCCCTTGCCAGGCTTGTTCTAATGGTTGCTGTGGCAAATaGTTTCCAGCTACAACGATA | + |
|
Preference number: 4 (lower is better) Translates to: PVPCESQDSISPCQACSNGCCGK*FPATTI Trigger: TATCGTTGTAGCTGGAAAGCATTTGCCACAGCAACC...ATTAGAACAAGCCTGGCAAGGGCTGATGCTGTCCTGGGACTCACAAGGTACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | TATGCTGCTTCCAGACTCTTTAGTTTAGTTGGGATGGGTCTCTGCTGCCGGGGCGACCAGGAACACCCCTaGTTTCCAAAGAGGTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YAASRLFSLVGMGLCCRGDQEHP*FPKRLN Trigger: ATTTAACCTCTTTGGAAACCAGGGGTGTTCCTGGTC...GCCCCGGCAGCAGAGACCCATCCCAACTAAACTAAAGAGTCTGGAAGCAGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | TGCTGCTTCTCTATGTTTATGTGGTGCCTGGCCCCTTCTGGGAAGGTTTCTGCTAGTGGGACAAAGCGCTaGACAGGGTCAATGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: CCFSMFMWCLAPSGKVSASGTKR*TGSMSL Trigger: TAAAGACATTGACCCTGTCCAGCGCTTTGTCCCACT...AGCAGAAACCTTCCCAGAAGGGGCCAGGCACCACATAAACATAGAGAAGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | TTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAACACGTATACCCAGCAGGATaGTTTGACCAGCCAGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKYSLLTWSTEPPRAKEHVYPAG*FDQPDN Trigger: GTTGTCTGGCTGGTCAAACCATCCTGCTGGGTATAC...GTGTTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAACACTCTTGGAGACAGTaGGTTAGAGATGACCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLKYSLLTWSTEPPRAKEHSWRQ*VRDDLL Trigger: GAGGAGGTCATCTCTAACCCACTGTCTCCAAGAGTG...TTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR TCA 90 bp | AGTCCCAGGACAGCATCAGCCCTTGCCAGGCTTGTTCTAATACAGGAAGGTCAAGATTATCTGGAGGCCTaGGGAAATCATTTCTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPRTASALARLVLIQEGQDYLEA*GNHFYQ Trigger: CTGGTAGAAATGATTTCCTCAGGCCTCCAGATAATC...TTGACCTTCCTGTATTAGAACAAGCCTGGCAAGGGCTGATGCTGTCCTGGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | AGTCCCAGGACAGCATCAGCCCTTGCCAGGCTTGTTCTAATACAGGAAGGTCAAGCTACAAGTGCTACATaGACCACCAAGTCATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPRTASALARLVLIQEGQATSAT*TTKSFS Trigger: GGAAAATGACTTGGTGGTTCATGTAGCACTTGTAGC...TTGACCTTCCTGTATTAGAACAAGCCTGGCAAGGGCTGATGCTGTCCTGGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | TCTGGGAAGGTTTCTGCTGCTTTAGGAGTCCAGCCTCCCTTGCTTCTCATTCACTGTTGTCTTCTCGGATaGGAACAAGAAAAAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGKVSAALGVQPPLLLIHCCLLG*EQEKVG Trigger: GCCCACTTTTTCTTGTTCTCATCCGAGAAGACAACA...GTGAATGAGAAGCAAGGGAGGCTGGACTCCTAAAGCAGCAGAAACCTTCCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | GCTGTCTGGTTAATGTCAACACAAAAGGCACAGCTGGAAAACCATCACCTATGCTTTTCAGCATGCCGCTaGACAACTCAGGGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVWLMSTQKAQLENHHLCFSACR*TTQGCW Trigger: CCAACAGCCCTGAGTTGTTCAGCGGCATGCTGAAAA...GCATAGGTGATGGTTTTCCAGCTGTGCCTTTTGTGTTGACATTAACCAGACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | GAGAATTCCTCTCATACACTTTATGGCCGAGTGCTCCAGCTCATGGGTCCGTCCAAGGAGAACATACGTTaGTCAGAAACTTTGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: ENSSHTLYGRVLQLMGPSKENIR*SETLGH Trigger: GTGTCCCAAAGTTTCTGATCAACGTATGTTCTCCTT...GGACGGACCCATGAGCTGGAGCACTCGGCCATAAAGTGTATGAGAGGAATTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162981.2 |
||
| CDS-3UTR GCA 90 bp | TTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAACACTCTGCGGTACTGCTCTaGCGTTTGACTTTTGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LKYSLLTWSTEPPRAKEHSAVLL*RLTFEC Trigger: GCATTCAAAAGTCAAACGGCAGAGCAGTACCGCAGA...GTGTTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCCAGGACAGCATCAGCCCTTGCCAGGCTTGTTCTAATACAGGAAGGTCAACCGACCAAAGCTTTTTaGTGCCAGCTCTTCTATACA | + |
|
Preference number: 4 (lower is better) Translates to: SPRTASALARLVLIQEGQPTKAF*CQLFYT Trigger: TGTATAGAAGAGCTGGCAGCAAAAAGCTTTGGTCGG...TTGACCTTCCTGTATTAGAACAAGCCTGGCAAGGGCTGATGCTGTCCTGGGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCCCTGCCCATCAACCACCAGAAGTTACTCTTTCTGCATGGGCTTCATGCTCTCATACACTTTATaGCCGAGTGCTCCAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLPCPSTTRSYSFCMGFMLSYTL*PSAPAH Trigger: ATGAGCTGGAGCACTCGGCCATAAAGTGTATGAGAG...CATGAAGCCCATGCAGAAAGAGTAACTTCTGGTGGTTGATGGGCAGGGAAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | TGCTGCTTCTCTATGTTTATGTGGTGCCTGGCCCCTTCTGGGAAGGTTTCTGCTTCTTGTTTAAACTGTTaGACCTTATCAGCCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CCFSMFMWCLAPSGKVSASCLNC*TLSACR Trigger: GCGGCAGGCTGATAAGGTCCAACAGTTTAAACAAGA...AGCAGAAACCTTCCCAGAAGGGGCCAGGCACCACATAAACATAGAGAAGCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | AGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAACACTAAGAACATTAGTAATGGATaGGGCCAGGCTGTCCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: SIPFSLGVLSHPGRKNTKNISNG*GQAVHY Trigger: GTAGTGGACAGCCTGGCCCCATCCATTACTAATGTT...CTTAGTGTTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR TCA 90 bp | AGTCCCAGGACAGCATCAGCCCTTGCCAGGCTTGTTCTAATACAGGAAGGTCAAGTATTGAGAAAAACTTaGAGGCGTTGGCTTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPRTASALARLVLIQEGQVLRKT*RRWLSA Trigger: AGCAGAAAGCCAACGCCTTCAAGTTTTTCTCAATAC...TTGACCTTCCTGTATTAGAACAAGCCTGGCAAGGGCTGATGCTGTCCTGGGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | TCTCTTCCCTGCCCATCAACCACCAGAAGTTACTCTTTCTGCATGGGCTTCATGTCTTTATGTCATCTATaGGCAGCAGAACGTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLPCPSTTRSYSFCMGFMSLCHL*AAERPE Trigger: CTCAGGACGTTCTGCTGCTCATAGATGACATAAAGA...CATGAAGCCCATGCAGAAAGAGTAACTTCTGGTGGTTGATGGGCAGGGAAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | CCTTTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAATCTTTATGTCATCTATaGGCAGCAGAACGTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLKYSLLTWSTEPPRAKESLCHL*AAERPE Trigger: CTCAGGACGTTCTGCTGCTCATAGATGACATAAAGA...TTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR TCA 90 bp | AGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAACACTAAGTGTTGTCTTCTCGGATaGGAACAAGAAAAAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SIPFSLGVLSHPGRKNTKCCLLG*EQEKVG Trigger: GCCCACTTTTTCTTGTTCTCATCCGAGAAGACAACA...CTTAGTGTTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR GCA 90 bp | AGATTGAAATGCCTGCTTAGGCAGGTCAGATTCCAGAAGAGTAAAGCTTCAACACACTTTATGGCCGAGTaGTCCAGCTCATGGGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RLKCLLRQVRFQKSKASTHFMAE*SSSWVR Trigger: ACGGACCCATGAGCTGGAGCACTCGGCCATAAAGTG...TGTTGAAGCTTTACTCTTCTGGAATCTGACCTGCCTAAGCAGGCATTTCAATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCCAGGACAGCATCAGCCCTTGCCAGGCTTGTTCTAATACAGGAAGGTCAAACCAAAGCTTTTTGCTaGCAGCTCTTCTATACACTC | + |
|
Preference number: 4 (lower is better) Translates to: SPRTASALARLVLIQEGQTKAFC*QLFYTL Trigger: GAGTGTATAGAAGAGCTGGCAGCAAAAAGCTTTGGT...TTGACCTTCCTGTATTAGAACAAGCCTGGCAAGGGCTGATGCTGTCCTGGGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR GCA 90 bp | CCTTTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAACCGACCAAAGCTTTTTaGTGCCAGCTCTTCTATACA | + |
|
Preference number: 4 (lower is better) Translates to: PLKYSLLTWSTEPPRAKEPTKAF*CQLFYT Trigger: TGTATAGAAGAGCTGGCAGCAAAAAGCTTTGGTCGG...TTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR CCA 90 bp | TATGCTGCTTCCAGACTCTTTAGTTTAGTTGGGATGGGTCTCTGCTGCCGGGGCACTTTATCAAGTGTCTaGCTGAACAGTGCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: YAASRLFSLVGMGLCCRGTLSSV*LNSASS Trigger: TGATGAAGCACTGTTCAGCCAGACACTTGATAAAGT...GCCCCGGCAGCAGAGACCCATCCCAACTAAACTAAAGAGTCTGGAAGCAGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | GCTGTCTGGTTAATGTCAACACAAAAGGCACAGCTGGAAAACCATCACCTATGCCACTCTTGGAGACAGTaGGTTAGAGATGACCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AVWLMSTQKAQLENHHLCHSWRQ*VRDDLL Trigger: GAGGAGGTCATCTCTAACCCACTGTCTCCAAGAGTG...GCATAGGTGATGGTTTTCCAGCTGTGCCTTTTGTGTTGACATTAACCAGACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR GCA 90 bp | TCTGGGAAGGTTTCTGCTGCTTTAGGAGTCCAGCCTCCCTTGCTTCTCATTCACGATTGGAGTATCTCATaGTCACGTTACGTTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGKVSAALGVQPPLLLIHDWSIS*SRYVDS Trigger: AGAATCAACGTAACGTGAGCATGAGATACTCCAATC...GTGAATGAGAAGCAAGGGAGGCTGGACTCCTAAAGCAGCAGAAACCTTCCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | TGCTGCTTCTCTATGTTTATGTGGTGCCTGGCCCCTTCTGGGAAGGTTTCTGCTCAGCTTAATCTCTGCTaGTTTGTAATAGCGTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CCFSMFMWCLAPSGKVSAQLNLC*FVIASV Trigger: AACAGACGCTATTACAAACCAGCAGAGATTAAGCTG...AGCAGAAACCTTCCCAGAAGGGGCCAGGCACCACATAAACATAGAGAAGCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | TTGATTTCAATCATTGCTTACCATTCGAATGCCACCTGCATGCAAAGGTCCAATTACCAAGGCAGCCAATaGGCCTATCTGGCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LISIIAYHSNATCMQRSNYQGSQ*AYLAFQ Trigger: CTGGAAGGCCAGATAGGCCCATTGGCTGCCTTGGTA...ATTGGACCTTTGCATGCAGGTGGCATTCGAATGGTAAGCAATGATTGAAATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | CCTTTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAAGAGAACAAGAAAAAGTaGGCGTCCATGCATTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLKYSLLTWSTEPPRAKEENKKK*ASMHFP Trigger: TGGAAAATGCATGGACGCCCACTTTTTCTTGTTCTC...TTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGCTTCTCTATGTTTATGTGGTGCCTGGCCCCTTCTGGGAAGGTTTCTGCTTGTCTATACTTTGGCTaGTCAATGTTTCCCAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: CCFSMFMWCLAPSGKVSACLYFG*SMFPSI Trigger: TATGCTGGGAAACATTGACCAGCCAAAGTATAGACA...AGCAGAAACCTTCCCAGAAGGGGCCAGGCACCACATAAACATAGAGAAGCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | CCTTTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAAGGATGTTTGGACAACTaGCACCTTTCAATTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLKYSLLTWSTEPPRAKEGCLDN*HLSISC Trigger: GCAAGAAATTGAAAGGTGCCAGTTGTCCAAACATCC...TTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| 3UTR CAA 72 bp | CCAAGCTGCTTTAGTCCAGGATGCCTGGCAGTCTTCTaGAGAAACACTAGAAGACTTACAACCTACCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSCFSPGCLAVF*RNTRRLTTYPN Trigger: ATTGGGGTAGGTTGTAAGTCTTCTAGTGTTTCTCAAGAAGACTGCCAGGCATCCTGGACTAAAGCAGCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAAGATCAACATGAACTTTaGCTCCTCCAATTATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLKYSLLTWSTEPPRAKEDQHEL*LLQLFP Trigger: AGGGAATAATTGGAGGAGTCAAAGTTCATGTTGATC...TTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGCTTCTCTATGTTTATGTGGTGCCTGGCCCCTTCTGGGAAGGTTTCTGCTGTTACCTGTTTGCCCTaGACTAAAACATTAGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: CCFSMFMWCLAPSGKVSAVTCLP*TKTLVM Trigger: CATTACTAATGTTTTAGTGCAGGGCAAACAGGTAAC...AGCAGAAACCTTCCCAGAAGGGGCCAGGCACCACATAAACATAGAGAAGCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR GCA 90 bp | AGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAACACTAAGCACCTTTCAATTTCTTaGCCAAACCCAATGCGTATT | + |
|
Preference number: 4 (lower is better) Translates to: SIPFSLGVLSHPGRKNTKHLSIS*PNPMRI Trigger: AATACGCATTGGGTTTGGGCAAGAAATTGAAAGGTG...CTTAGTGTTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR CCA 90 bp | GGCTGTCTGGTTAATGTCAACACAAAAGGCACAGCTGGAAAACCATCACCTATGTGTAATAGCGTCTGTTaGGATCTTCCAATGGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GCLVNVNTKGTAGKPSPMCNSVC*DLPMAF Trigger: GAACGCCATTGGAAGATCCCAACAGACGCTATTACA...CATAGGTGATGGTTTTCCAGCTGTGCCTTTTGTGTTGACATTAACCAGACAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | TGCTGCTTCTCTATGTTTATGTGGTGCCTGGCCCCTTCTGGGAAGGTTTCTGCTCACATAATAGTACTTTaGCACAACAGGATATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCFSMFMWCLAPSGKVSAHIIVL*HNRISF Trigger: GAAGGATATCCTGTTGTGCCAAAGTACTATTATGTG...AGCAGAAACCTTCCCAGAAGGGGCCAGGCACCACATAAACATAGAGAAGCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | CAGTGCTCTGGAAAAGCAGTTGAATTTGATATTCAGTCAGGAGTTCCAACAGACACGGCCACAGTTACTTaGAAACCGCTTCTGACTACC | + |
|
Preference number: 4 (lower is better) Translates to: QCSGKAVEFDIQSGVPTDTATVT*KPLLTT Trigger: GGTAGTCAGAAGCGGTTTCCAAGTAACTGTGGCCGT...GTCTGTTGGAACTCCTGACTGAATATCAAATTCAACTGCTTTTCCAGAGCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | ATTTTTAAGGCTGGATTGTATCATGATTCCCAGCTCTGTCTGACTGGCACTTCTGTATACCCAGCAGGATaGTTTGACCAGCCAGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: IFKAGLYHDSQLCLTGTSVYPAG*FDQPDN Trigger: GTTGTCTGGCTGGTCAAACCATCCTGCTGGGTATAC...AGAAGTGCCAGTCAGACAGAGCTGGGAATCATGATACAATCCAGCCTTAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | GCTGTCTGGTTAATGTCAACACAAAAGGCACAGCTGGAAAACCATCACCTATGCCAAAGTTGGTTGCTGTaGCAAATGCTTTCCAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: AVWLMSTQKAQLENHHLCQSWLL*QMLSSY Trigger: GTAGCTGGAAAGCATTTGCCACAGCAACCAACTTTG...GCATAGGTGATGGTTTTCCAGCTGTGCCTTTTGTGTTGACATTAACCAGACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | ATTTTTAAGGCTGGATTGTATCATGATTCCCAGCTCTGTCTGACTGGCACTTCTCCGGTAGTTGGACTTTaGTACATCAGCATCGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IFKAGLYHDSQLCLTGTSPVVGL*YISIVD Trigger: GTCAACGATGCTGATGTATCAAAGTCCAACTACCGG...AGAAGTGCCAGTCAGACAGAGCTGGGAATCATGATACAATCCAGCCTTAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | GCTGTCTGGTTAATGTCAACACAAAAGGCACAGCTGGAAAACCATCACCTATGCGACCCAACTTTTCATTaGTTCCCAGGTGGAAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVWLMSTQKAQLENHHLCDPTFH*FPGGNK Trigger: CTTATTTCCACCTGGGAATCAATGAAAAGTTGGGTC...GCATAGGTGATGGTTTTCCAGCTGTGCCTTTTGTGTTGACATTAACCAGACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | CCTTTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAATGTAAACGATCAACATaGACTTTGACTCCTCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: PLKYSLLTWSTEPPRAKECKRST*TLTPPI Trigger: AATTGGAGGAGTCAAAGTTCATGTTGATCGTTTACA...TTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR GCA 90 bp | TTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAACACGTTACCTGTTTGCCCTaGACTAAAACATTAGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LKYSLLTWSTEPPRAKEHVTCLP*TKTLVM Trigger: CATTACTAATGTTTTAGTGCAGGGCAAACAGGTAAC...GTGTTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR CCA 90 bp | TTGATTTCAATCATTGCTTACCATTCGAATGCCACCTGCATGCAAAGGTCCAATGTTGGGATCTTCCAATaGCGTTCTGTACCCATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LISIIAYHSNATCMQRSNVGIFQ*RSVPIS Trigger: CGAGATGGGTACAGAACGCCATTGGAAGATCCCAAC...ATTGGACCTTTGCATGCAGGTGGCATTCGAATGGTAAGCAATGATTGAAATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| 3UTR CAA 72 bp | TGTATGCTTTGGTATGTCAACTGGTTGACTGGTTGGTaGGTTGTAGGTTGTGCCTCATCTGAAGAGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: CMLWYVNWLTGW*VVGCASSEEAF Trigger: AAATGCCTCTTCAGATGAGGCACAACCTACAACCAACCAACCAGTCAACCAGTTGACATACCAAAGCATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| CDS-3UTR TCA 90 bp | ATTTTTAAGGCTGGATTGTATCATGATTCCCAGCTCTGTCTGACTGGCACTTCTTATCAAGTGTCTGGCTaGACAGTGCTTCATCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: IFKAGLYHDSQLCLTGTSYQVSG*TVLHHP Trigger: TGGATGATGAAGCACTGTTCAGCCAGACACTTGATA...AGAAGTGCCAGTCAGACAGAGCTGGGAATCATGATACAATCCAGCCTTAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | CAGTGCTCTGGAAAAGCAGTTGAATTTGATATTCAGTCAGGAGTTCCAACAGACGGGTGTTCTATTCAATaGCCCATCAATCTGACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QCSGKAVEFDIQSGVPTDGCSIQ*PINLTS Trigger: AGACGTCAGATTGATGGGTCATTGAATAGAACACCC...GTCTGTTGGAACTCCTGACTGAATATCAAATTCAACTGCTTTTCCAGAGCACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR GCA 90 bp | ATTTTTAAGGCTGGATTGTATCATGATTCCCAGCTCTGTCTGACTGGCACTTCTTGTCTGGCTGAACAGTaGTTCATCATCCAAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IFKAGLYHDSQLCLTGTSCLAEQ*FIIQGK Trigger: TTTGCCTTGGATGATGAAGCACTGTTCAGCCAGACA...AGAAGTGCCAGTCAGACAGAGCTGGGAATCATGATACAATCCAGCCTTAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR GCA 90 bp | TTGATTTCAATCATTGCTTACCATTCGAATGCCACCTGCATGCAAAGGTCCAATTCTGCGGTACTGCTCTaGCGTTTGACTTTTGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LISIIAYHSNATCMQRSNSAVLL*RLTFEC Trigger: GCATTCAAAAGTCAAACGGCAGAGCAGTACCGCAGA...ATTGGACCTTTGCATGCAGGTGGCATTCGAATGGTAAGCAATGATTGAAATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR GCA 90 bp | ATTTTTAAGGCTGGATTGTATCATGATTCCCAGCTCTGTCTGACTGGCACTTCTTCCGACAAAGTTGGTTaGTGTGGCAAATGCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IFKAGLYHDSQLCLTGTSSDKVG*CGKCFP Trigger: TGGAAAGCATTTGCCACAGCAACCAACTTTGTCGGA...AGAAGTGCCAGTCAGACAGAGCTGGGAATCATGATACAATCCAGCCTTAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR GCA 90 bp | TTGATTTCAATCATTGCTTACCATTCGAATGCCACCTGCATGCAAAGGTCCAATCCTTCGTCAAGTAGCTaGAGGTTCCTCTTTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LISIIAYHSNATCMQRSNPSSSS*RFLFFP Trigger: TGGGAAAAAGAGGAACCTGCAGCTACTTGACGAAGG...ATTGGACCTTTGCATGCAGGTGGCATTCGAATGGTAAGCAATGATTGAAATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | CAGTGCTCTGGAAAAGCAGTTGAATTTGATATTCAGTCAGGAGTTCCAACAGACCAGGATATCCTTCTGTaGTCTGATGAAGCAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QCSGKAVEFDIQSGVPTDQDILL*SDEAKV Trigger: CACCTTTGCTTCATCAGACCACAGAAGGATATCCTG...GTCTGTTGGAACTCCTGACTGAATATCAAATTCAACTGCTTTTCCAGAGCACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | CAGAATTCCTCTGAGCCCAATGTACACGTAAGATTCAAAAACACGCTAAGAAATCCGGTAGTTGGACTTTaGTACATCAGCATCGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QNSSEPNVHVRFKNTLRNPVVGL*YISIVD Trigger: GTCAACGATGCTGATGTATCAAAGTCCAACTACCGG...ATTTCTTAGCGTGTTTTTGAATCTTACGTGTACATTGGGCTCAGAGGAATTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| CDS-3UTR TCA 90 bp | ATTTTTAAGGCTGGATTGTATCATGATTCCCAGCTCTGTCTGACTGGCACTTCTGGTGTCAAAAGGTCCTaGTATTCCTTGACTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IFKAGLYHDSQLCLTGTSGVKRS*YSLTCS Trigger: TGAACAAGTCAAGGAATATCAGGACCTTTTGACACC...AGAAGTGCCAGTCAGACAGAGCTGGGAATCATGATACAATCCAGCCTTAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR GCA 90 bp | GGCTGTCTGGTTAATGTCAACACAAAAGGCACAGCTGGAAAACCATCACCTATGAAAAGTGGGCGTCCATaGATTTTCCAATATTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GCLVNVNTKGTAGKPSPMKSGRP*IFQYCL Trigger: TAAGCAATATTGGAAAATGCATGGACGCCCACTTTT...CATAGGTGATGGTTTTCCAGCTGTGCCTTTTGTGTTGACATTAACCAGACAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | TCTTCCAAAAATAATGGAATCCACTGTCAGCTCTTAGATTCTGGTTTCCAAAGAGACTCTCGTGCACTTTaGACTTCTCTTCTCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSKNNGIHCQLLDSGFQRDSRAL*TSLLHH Trigger: GTGGTGGAGAAGAGAAGTCCAAAGTGCACGAGAGTC...TCTTTGGAAACCAGAATCTAAGAGCTGACAGTGGATTCCATTATTTTTGGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTTAAGGCTGGATTGTATCATGATTCCCAGCTCTGTCTGACTGGCACTTCTGAGAACAAGAAAAAGTaGGCGTCCATGCATTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IFKAGLYHDSQLCLTGTSENKKK*ASMHFP Trigger: TGGAAAATGCATGGACGCCCACTTTTTCTTGTTCTC...AGAAGTGCCAGTCAGACAGAGCTGGGAATCATGATACAATCCAGCCTTAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | CAGTGCTCTGGAAAAGCAGTTGAATTTGATATTCAGTCAGGAGTTCCAACAGACGAGACTGCATTTATCTaGAGATGGCCATATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QCSGKAVEFDIQSGVPTDETAFI*RWPYSS Trigger: TGAAGAATATGGCCATCTTCAGATAAATGCAGTCTC...GTCTGTTGGAACTCCTGACTGAATATCAAATTCAACTGCTTTTCCAGAGCACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR TCA 90 bp | ATTGCTTCTGATGGAGGAACATCAAGATTTATTGATCATCCCAAAATATCTTGCATGACCAGTTCTTGCTaGATGACTGCCTCCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IASDGGTSRFIDHPKISCMTSSC*MTASLS Trigger: TGAGAGGGAGGCAGTCATTCAGCAAGAACTGGTCAT...GCAAGATATTTTGGGATGATCAATAAATCTTGATGTTCCTCCATCAGAAGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | ATTGCTTCTGATGGAGGAACATCAAGATTTATTGATCATCCCAAAATATCTTGCGACTCTCGTGCACTTTaGACTTCTCTTCTCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: IASDGGTSRFIDHPKISCDSRAL*TSLLHH Trigger: GTGGTGGAGAAGAGAAGTCCAAAGTGCACGAGAGTC...GCAAGATATTTTGGGATGATCAATAAATCTTGATGTTCCTCCATCAGAAGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | CAGAATTCCTCTGAGCCCAATGTACACGTAAGATTCAAAAACACGCTAAGAAATTCTTGTTTAAACTGTTaGACCTTATCAGCCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QNSSEPNVHVRFKNTLRNSCLNC*TLSACR Trigger: GCGGCAGGCTGATAAGGTCCAACAGTTTAAACAAGA...ATTTCTTAGCGTGTTTTTGAATCTTACGTGTACATTGGGCTCAGAGGAATTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| CDS-3UTR CCA 90 bp | TTTGATATTCAGTCAGGAGTTCCAACAGACGTTGATTGTACTATAAACTTAGCAACGTTGATTCTGAAGTaGGACAAAGCGCTGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FDIQSGVPTDVDCTINLATLILK*DKALDR Trigger: CCTGTCCAGCGCTTTGTCCCACTTCAGAATCAACGT...TGCTAAGTTTATAGTACAATCAACGTCTGTTGGAACTCCTGACTGAATATCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR GCA 90 bp | CTGTATATTCTTCCCAACAGTTTGTTACTCTTTATGCTCAGAAGTCAACCAGAGACCAAAGCTTTTTGCTaGCAGCTCTTCTATACACTC | + |
|
Preference number: 4 (lower is better) Translates to: LYILPNSLLLFMLRSQPETKAFC*QLFYTL Trigger: GAGTGTATAGAAGAGCTGGCAGCAAAAAGCTTTGGT...CTCTGGTTGACTTCTGAGCATAAAGAGTAACAAACTGTTGGGAAGAATATACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR CCA 90 bp | ATTGCTTCTGATGGAGGAACATCAAGATTTATTGATCATCCCAAAATATCTTGCAACATTAGTAATGGATaGGGCCAGGCTGTCCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: IASDGGTSRFIDHPKISCNISNG*GQAVHY Trigger: GTAGTGGACAGCCTGGCCCCATCCATTACTAATGTT...GCAAGATATTTTGGGATGATCAATAAATCTTGATGTTCCTCCATCAGAAGCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| 3UTR CAA 72 bp | AACCAGTTGTTAGCCACAATCACATACAATGTCACATaGCTCTGTCGCATTTCAGGAATCTTCAAATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NQLLATITYNVT*LCRISGIFKCS Trigger: GGAACATTTGAAGATTCCTGAAATGCGACAGAGCAATGTGACATTGTATGTGATTGTGGCTAACAACTGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| CDS-3UTR TCA 90 bp | TTGATTTCAATCATTGCTTACCATTCGAATGCCACCTGCATGCAAAGGTCCAATTGTAAACGATCAACATaGACTTTGACTCCTCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LISIIAYHSNATCMQRSNCKRST*TLTPPI Trigger: AATTGGAGGAGTCAAAGTTCATGTTGATCGTTTACA...ATTGGACCTTTGCATGCAGGTGGCATTCGAATGGTAAGCAATGATTGAAATCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR GCA 90 bp | TTTGATATTCAGTCAGGAGTTCCAACAGACGTTGATTGTACTATAAACTTAGCAGCTTTCTGCTACAAGTaGTACATGAACCACCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FDIQSGVPTDVDCTINLAAFCYK*YMNHQV Trigger: GACTTGGTGGTTCATGTAGCACTTGTAGCAGAAAGC...TGCTAAGTTTATAGTACAATCAACGTCTGTTGGAACTCCTGACTGAATATCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | CAGAATTCCTCTGAGCCCAATGTACACGTAAGATTCAAAAACACGCTAAGAAATAAAGAGACCGGTAGTTaGACTTTGATACATCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QNSSEPNVHVRFKNTLRNKETGS*TLIHQH Trigger: ATGCTGATGTATCAAAGTCCAACTACCGGTCTCTTT...ATTTCTTAGCGTGTTTTTGAATCTTACGTGTACATTGGGCTCAGAGGAATTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| CDS-3UTR CCA 90 bp | TTTGATATTCAGTCAGGAGTTCCAACAGACGTTGATTGTACTATAAACTTAGCACAAGTCATTTTCCAGTaGGCCCTGATTGGAGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: FDIQSGVPTDVDCTINLAQVIFQ*ALIGVS Trigger: AGATACTCCAATCAGGGCCCACTGGAAAATGACTTG...TGCTAAGTTTATAGTACAATCAACGTCTGTTGGAACTCCTGACTGAATATCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR GCA 90 bp | CTGTATATTCTTCCCAACAGTTTGTTACTCTTTATGCTCAGAAGTCAACCAGAGAAAAGTGGGCGTCCATaGATTTTCCAATATTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LYILPNSLLLFMLRSQPEKSGRP*IFQYCL Trigger: TAAGCAATATTGGAAAATGCATGGACGCCCACTTTT...CTCTGGTTGACTTCTGAGCATAAAGAGTAACAAACTGTTGGGAAGAATATACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| 3UTR CAA 72 bp | TTGAGAAACACTAGAAGACTTACAACCTACCCCAATTaGTTAACTTCCTTATTGGGCTTCCTTTTCTTATCG | + |
|
Preference number: 4 (lower is better) Translates to: LRNTRRLTTYPN*LTSLLGFLFLS Trigger: CGATAAGAAAAGGAAGCCCAATAAGGAAGTTAACAAATTGGGGTAGGTTGTAAGTCTTCTAGTGTTTCTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| 3UTR CAA 72 bp | TGTAATAGGAAGCTAACTGCTCATTCAGAAACAGACTaGCAAGTGATGTCTATTTTAACTAAGACAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CNRKLTAHSETD*QVMSILTKTAF Trigger: AAACGCTGTCTTAGTTAAAATAGACATCACTTGCAAGTCTGTTTCTGAATGAGCAGTTAGCTTCCTATTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CCA 90 bp | ATTGCTTCTGATGGAGGAACATCAAGATTTATTGATCATCCCAAAATATCTTGCAATTCATCTCATACATaGTCATATCCGACAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IASDGGTSRFIDHPKISCNSSHT*SYPTKL Trigger: CAACTTTGTCGGATATGACCATGTATGAGATGAATT...GCAAGATATTTTGGGATGATCAATAAATCTTGATGTTCCTCCATCAGAAGCAAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS CCA 90 bp | CAGCTGCTTCACTTCACTGGGCGAGAGCTGGTACAAGTCCACAGCTaGCTTATCCCCGCCCCGGACCTGCAGTTCATACTCCATGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: QLLHFTGRELVQVHS*LIPAPDLQFILHGV Trigger: CACGCCATGGAGTATGAACTGCAGGTCCGGGGCGGGGATAAGCCAGCTGTGGACTTGTACCAGCTCTCGCCCAGTGAAGTGAAGCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS CCA 90 bp | TCTGTTGAGGCTGGAGAATGTCTAGCAGCAGCTGCTTCACTTCACTaGGCGAGAGCTGGTACAAGTCCACAGCTGGCTTATCCCCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SVEAGECLAAAASLH*ARAGTSPQLAYPRP Trigger: GGGGCGGGGATAAGCCAGCTGTGGACTTGTACCAGCTCTCGCCCAGTGAAGTGAAGCAGCTGCTGCTAGACATTCTCCAGCCTCAACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CAA 90 bp | TATGCTGCTTCCAGACTCTTTAGTTTAGTTGGGATGGGTCTCTGCTGCCGGGGCGATGCCTGGCTCGTGTaGCGCCTCAGGAGCATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YAASRLFSLVGMGLCCRGDAWLV*RLRSIC Trigger: GCAGATGCTCCTGAGGCGCAACACGAGCCAGGCATC...GCCCCGGCAGCAGAGACCCATCCCAACTAAACTAAAGAGTCTGGAAGCAGCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS GCA 90 bp | GAGAGCTGGTACAAGTCCACAGCTGGCTTATCCCCGCCCCGGACCTaGAGTTCATACTCCATGGCGTGGATGATCCACCCAATGCGTATT | + |
|
Preference number: 5 (lower is better) Translates to: ESWYKSTAGLSPPRT*SSYSMAWMIHPMRI Trigger: AATACGCATTGGGTGGATCATCCACGCCATGGAGTATGAACTGCAGGTCCGGGGCGGGGATAAGCCAGCTGTGGACTTGTACCAGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS CCA 90 bp | GATTTCGTGGGTGGATTTGTTTTTCCACTCGGTAATGGTGATGCCTaGCTCGTGTTGCGCCTCAGGAGCATCTGCGGTACTGCTCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: DFVGGFVFPLGNGDA*LVLRLRSICGTALP Trigger: CGGCAGAGCAGTACCGCAGATGCTCCTGAGGCGCAACACGAGCCAGGCATCACCATTACCGAGTGGAAAAACAAATCCACCCACGAAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGTTTAGTTGGGATGGGTCTCTGCTGCCGGGGCGGTGCCCACCCCGTGGTAACCGACCAAAGCTTTTaGCTGCCAGCTCTTCTATAC | + |
|
Preference number: 5 (lower is better) Translates to: FSLVGMGLCCRGGAHPVVTDQSF*LPALLY Trigger: GTATAGAAGAGCTGGCAGCAAAAAGCTTTGGTCGGT...TACCACGGGGTGGGCACCGCCCCGGCAGCAGAGACCCATCCCAACTAAACTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CAA 90 bp | TTTAGTTTAGTTGGGATGGGTCTCTGCTGCCGGGGCGGTGCCCACCCCGTGGTATGTATTGAGAAAAACTaGAAGGCGTTGGCTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSLVGMGLCCRGGAHPVVCIEKN*KALAFC Trigger: GCAGAAAGCCAACGCCTTCAAGTTTTTCTCAATACA...TACCACGGGGTGGGCACCGCCCCGGCAGCAGAGACCCATCCCAACTAAACTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CAA 90 bp | TTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAACACACCCAGCAGGATGGTTaGACCAGCCAGACAACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKYSLLTWSTEPPRAKEHTQQDG*TSQTTA Trigger: TGCGGTTGTCTGGCTGGTCAAACCATCCTGCTGGGT...GTGTTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS TCA 90 bp | CAGGCAGGAGTCCTCATTGCTGGGCTTGACTTCTCCCTCGAGCAGTaGGTTCATCACAACCTTCGTCAAGTAGCTGCAGGTTCCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QAGVLIAGLDFSLEQ*VHHNLRQVAAGSSF Trigger: AAAAGAGGAACCTGCAGCTACTTGACGAAGGTTGTGATGAACTCACTGCTCGAGGGAGAAGTCAAGCCCAGCAATGAGGACTCCTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS GCA 90 bp | GTGGATTTGTTTTTCCACTCGGTAATGGTGATGCCTGGCTCGTGTTaGGCCTCAGGAGCATCTGCGGTACTGCTCTGCCGTTTGACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VDLFFHSVMVMPGSC*ASGASAVLLCRLTF Trigger: AAAAGTCAAACGGCAGAGCAGTACCGCAGATGCTCCTGAGGCGCAACACGAGCCAGGCATCACCATTACCGAGTGGAAAAACAAATCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGGAAGGTTTCTGCTGCTTTAGGAGTCCAGCCTCCCTTGCTTCTCATTCACTTAGGGCCCTCTCTTTaGAGCAGTATACCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGKVSAALGVQPPLLLIHLGPSL*SSIPSR Trigger: CCTGCTGGGTATACTGCTCAAAAGAGAGGGCCCTAA...GTGAATGAGAAGCAAGGGAGGCTGGACTCCTAAAGCAGCAGAAACCTTCCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CAA 90 bp | CCTTTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAATTAGGGCCCTCTCTTTaGAGCAGTATACCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLKYSLLTWSTEPPRAKELGPSL*SSIPSR Trigger: CCTGCTGGGTATACTGCTCAAAAGAGAGGGCCCTAA...TTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR CAA 90 bp | AGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAACACTAAGGTGGATGACCAGTTCTaGCTGAATGACTGCCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SIPFSLGVLSHPGRKNTKVDDQF*LNDCLP Trigger: AGGGAGGCAGTCATTCAGCAAGAACTGGTCATCCAC...CTTAGTGTTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAAAACAACTCAGGGCTGTaGGAGATGATCCAGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: PLKYSLLTWSTEPPRAKENNSGL*EMIQPM Trigger: CATCGGCTGGATCATCTCCAACAGCCCTGAGTTGTT...TTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS TCA 90 bp | GATTCTCTGGGTAACAGTGAGCACAATGTCTGCCTGTTGCGGTTGTaGGCATCGAGATCCACAAATATAACTGACCAGGAACACCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DSLGNSEHNVCLLRL*ASRSTNITDQEHPW Trigger: CCAGGGGTGTTCCTGGTCAGTTATATTTGTGGATCTCGATGCTCACAACCGCAACAGGCAGACATTGTGCTCACTGTTACCCAGAGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS TCA 90 bp | AGCCAATGGGCCTATCTGGCCTTCCAGACAGACCCAACTTTTCATTaGTTCCCAGGTGGAAATAAGCTTTTACAAGCTCCTGCTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SQWAYLAFQTDPTFH*FPGGNKLLQAPAEA Trigger: GGCCTCAGCAGGAGCTTGTAAAAGCTTATTTCCACCTGGGAATCAATGAAAAGTTGGGTCTGTCTGGAAGGCCAGATAGGCCCATTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CAA 90 bp | GGCTGTCTGGTTAATGTCAACACAAAAGGCACAGCTGGAAAACCATCACCTATGTCATGGGTCCGTCCCTaGTCATCATCAATGCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GCLVNVNTKGTAGKPSPMSWVRP*SSSMRL Trigger: CAGGCGCATTGATGATGACAAGGGACGGACCCATGA...CATAGGTGATGGTTTTCCAGCTGTGCCTTTTGTGTTGACATTAACCAGACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CAA 90 bp | TATGCTGCTTCCAGACTCTTTAGTTTAGTTGGGATGGGTCTCTGCTGCCGGGGCAAAAACTTGAAGGCGTaGGCTTTCTGCTACAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: YAASRLFSLVGMGLCCRGKNLKA*AFCYKC Trigger: GCACTTGTAGCAGAAAGCCAACGCCTTCAAGTTTTT...GCCCCGGCAGCAGAGACCCATCCCAACTAAACTAAAGAGTCTGGAAGCAGCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS GCA 90 bp | ATGCCTGGCTCGTGTTGCGCCTCAGGAGCATCTGCGGTACTGCTCTaGCGTTTGACTTTTGAATGCTTAGGAAATTCTAGTTCTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: MPGSCCASGASAVLL*RLTFECLGNSSSSK Trigger: CTTTGAAGAACTAGAATTTCCTAAGCATTCAAAAGTCAAACGGCAGAGCAGTACCGCAGATGCTCCTGAGGCGCAACACGAGCCAGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
||
| CDS-3UTR CAA 90 bp | GCTGTCTGGTTAATGTCAACACAAAAGGCACAGCTGGAAAACCATCACCTATGCCAGAGTGAAGACATGTaGTGGGCCGGGGATCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AVWLMSTQKAQLENHHLCQSEDM*WAGDLV Trigger: AACAAGATCCCCGGCCCACAACATGTCTTCACTCTG...GCATAGGTGATGGTTTTCCAGCTGTGCCTTTTGTGTTGACATTAACCAGACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CAA 90 bp | TCTTCAAATGTTCCTGAAGAAAATGAGTCCAGTGCTTGGCCCACAATGCTGAGCCAGAGTGAAGACATGTaGTGGGCCGGGGATCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSNVPEENESSAWPTMLSQSEDM*WAGDLV Trigger: AACAAGATCCCCGGCCCACAACATGTCTTCACTCTG...GCTCAGCATTGTGGGCCAAGCACTGGACTCATTTTCTTCAGGAACATTTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCCAGGACAGCATCAGCCCTTGCCAGGCTTGTTCTAATACAGGAAGGTCAACTTCTAAGGCTGCTTTaGCTAAACCAACAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPRTASALARLVLIQEGQLLRLL*LNQQSL Trigger: CAAGCTCTGTTGGTTTAGCAAAAGCAGCCTTAGAAG...TTGACCTTCCTGTATTAGAACAAGCCTGGCAAGGGCTGATGCTGTCCTGGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS-3UTR CAA 90 bp | AGTCCCAGGACAGCATCAGCCCTTGCCAGGCTTGTTCTAATACAGGAAGGTCAAGTACTGCTCTGCCGTTaGACTTTTGAATGCTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPRTASALARLVLIQEGQVLLCR*TFECLG Trigger: TCCTAAGCATTCAAAAGTCAAACGGCAGAGCAGTAC...TTGACCTTCCTGTATTAGAACAAGCCTGGCAAGGGCTGATGCTGTCCTGGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CAA 90 bp | CTGTATATTCTTCCCAACAGTTTGTTACTCTTTATGCTCAGAAGTCAACCAGAGGATGCCTGGCTCGTGTaGCGCCTCAGGAGCATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LYILPNSLLLFMLRSQPEDAWLV*RLRSIC Trigger: GCAGATGCTCCTGAGGCGCAACACGAGCCAGGCATC...CTCTGGTTGACTTCTGAGCATAAAGAGTAACAAACTGTTGGGAAGAATATACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAAACCGACCAAAGCTTTTaGCTGCCAGCTCTTCTATAC | + |
|
Preference number: 5 (lower is better) Translates to: PLKYSLLTWSTEPPRAKETDQSF*LPALLY Trigger: GTATAGAAGAGCTGGCAGCAAAAAGCTTTGGTCGGT...TTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR CAA 90 bp | TGCTGCTTCTCTATGTTTATGTGGTGCCTGGCCCCTTCTGGGAAGGTTTCTGCTCTTTATTTAAAAGACTaGCTGCACGGCGTACAACCG | + |
|
Preference number: 5 (lower is better) Translates to: CCFSMFMWCLAPSGKVSALYLKD*LHGVQP Trigger: CGGTTGTACGCCGTGCAGCAAGTCTTTTAAATAAAG...AGCAGAAACCTTCCCAGAAGGGGCCAGGCACCACATAAACATAGAGAAGCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CAA 90 bp | TCTCTTCCCTGCCCATCAACCACCAGAAGTTACTCTTTCTGCATGGGCTTCATGCACCTGCTGAGGAGTTaGGGTTTGAATACCATATGT | + |
|
Preference number: 5 (lower is better) Translates to: SLPCPSTTRSYSFCMGFMHLLRS*GLNTIC Trigger: ACATATGGTATTCAAACCCAAACTCCTCAGCAGGTG...CATGAAGCCCATGCAGAAAGAGTAACTTCTGGTGGTTGATGGGCAGGGAAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CAA 90 bp | CCTTTGAAGTATTCCCTTCTCACTTGGAGTACTGAGCCACCCAGGGCGAAAGAAGTACTGCTCTGCCGTTaGACTTTTGAATGCTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PLKYSLLTWSTEPPRAKEVLLCR*TFECLG Trigger: TCCTAAGCATTCAAAAGTCAAACGGCAGAGCAGTAC...TTCTTTCGCCCTGGGTGGCTCAGTACTCCAAGTGAGAAGGGAATACTTCAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGGAAGGTTTCTGCTGCTTTAGGAGTCCAGCCTCCCTTGCTTCTCATTCACCCGACTCTCATCTTTTaGAAACTCATGAAACGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGKVSAALGVQPPLLLIHPTLIF*KLMKRF Trigger: GAAGCGTTTCATGAGTTTCAAAAAGATGAGAGTCGG...GTGAATGAGAAGCAAGGGAGGCTGGACTCCTAAAGCAGCAGAAACCTTCCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CAA 90 bp | CAGTGCTCTGGAAAAGCAGTTGAATTTGATATTCAGTCAGGAGTTCCAACAGACTCCTCATTGCTGGGCTaGACTTCTCCCTCGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QCSGKAVEFDIQSGVPTDSSLLG*TSPSSS Trigger: ACTGCTCGAGGGAGAAGTCAAGCCCAGCAATGAGGA...GTCTGTTGGAACTCCTGACTGAATATCAAATTCAACTGCTTTTCCAGAGCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CAA 90 bp | TGCTGCTTCTCTATGTTTATGTGGTGCCTGGCCCCTTCTGGGAAGGTTTCTGCTCTACCATTGTTATATTaGCTTCCTCTTTCCCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: CCFSMFMWCLAPSGKVSALPLLY*LPLSQT Trigger: TGTCTGGGAAAGAGGAAGCAAATATAACAATGGTAG...AGCAGAAACCTTCCCAGAAGGGGCCAGGCACCACATAAACATAGAGAAGCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS-3UTR CAA 90 bp | CAGTGCTCTGGAAAAGCAGTTGAATTTGATATTCAGTCAGGAGTTCCAACAGACGTGGATGACCAGTTCTaGCTGAATGACTGCCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QCSGKAVEFDIQSGVPTDVDDQF*LNDCLP Trigger: AGGGAGGCAGTCATTCAGCAAGAACTGGTCATCCAC...GTCTGTTGGAACTCCTGACTGAATATCAAATTCAACTGCTTTTCCAGAGCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS CCA 90 bp | GGTGGAAATAAGCTTTTACAAGCTCCTGCTGAGGCCAGATCTGAATaGGTTCCACCTGCTGAGGAGTTTGGGTTTGAATACCATATGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GGNKLLQAPAEARSE*VPPAEEFGFEYHMY Trigger: ATACATATGGTATTCAAACCCAAACTCCTCAGCAGGTGGAACCCATTCAGATCTGGCCTCAGCAGGAGCTTGTAAAAGCTTATTTCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS-3UTR CAA 90 bp | TGTTATAGATTATCTGGAGGCCTGAGGAAATCATTTCTACCAGGTAAAGGAGAATCATGGGTCCGTCCCTaGTCATCATCAATGCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CYRLSGGLRKSFLPGKGESWVRP*SSSMRL Trigger: CAGGCGCATTGATGATGACAAGGGACGGACCCATGA...TTCTCCTTTACCTGGTAGAAATGATTTCCTCAGGCCTCCAGATAATCTATAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160611.8 |
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| CDS-3UTR CAA 90 bp | TGCTGCTTCTCTATGTTTATGTGGTGCCTGGCCCCTTCTGGGAAGGTTTCTGCTAGTTCGGTACTACCATaGTTATATTTGCTTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CCFSMFMWCLAPSGKVSASSVLP*LYLLPL Trigger: AAGAGGAAGCAAATATAACAATGGTAGTACCGAACT...AGCAGAAACCTTCCCAGAAGGGGCCAGGCACCACATAAACATAGAGAAGCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CAA 90 bp | TCTGGGAAGGTTTCTGCTGCTTTAGGAGTCCAGCCTCCCTTGCTTCTCATTCACCTGATATTCCTTGACTaGTTCAAGATTGCCTCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SGKVSAALGVQPPLLLIHLIFLD*FKIASK Trigger: TTTAGAGGCAATCTTGAACAAGTCAAGGAATATCAG...GTGAATGAGAAGCAAGGGAGGCTGGACTCCTAAAGCAGCAGAAACCTTCCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CAA 90 bp | TCTCTTCCCTGCCCATCAACCACCAGAAGTTACTCTTTCTGCATGGGCTTCATGGCACATAATAGTACTTaGGCACAACAGGATATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLPCPSTTRSYSFCMGFMAHNST*AQQDIL Trigger: AAGGATATCCTGTTGTGCCAAAGTACTATTATGTGC...CATGAAGCCCATGCAGAAAGAGTAACTTCTGGTGGTTGATGGGCAGGGAAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS-3UTR CAA 90 bp | TTGATTTCAATCATTGCTTACCATTCGAATGCCACCTGCATGCAAAGGTCCAATCACGGCCACAGTTACTaGGAAACCGCTTCTGACTAC | + |
|
Preference number: 5 (lower is better) Translates to: LISIIAYHSNATCMQRSNHGHSY*ETASDY Trigger: GTAGTCAGAAGCGGTTTCCAAGTAACTGTGGCCGTG...ATTGGACCTTTGCATGCAGGTGGCATTCGAATGGTAAGCAATGATTGAAATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS-3UTR CAA 90 bp | GCCGCATGTAGCAGTAGAGAATTCCTCTCATACACTTTATGGCCGAGTGCTCCAAAAGGAGAACATACGTaGATCAGAAACTTTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: AACSSREFLSYTLWPSAPKGEHT*IRNFGT Trigger: TGTCCCAAAGTTTCTGATCAACGTATGTTCTCCTTT...TGGAGCACTCGGCCATAAAGTGTATGAGAGGAATTCTCTACTGCTACATGCGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162981.2 |
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| CDS TCA 90 bp | GACCAAAGCTTTTTGCTGCCAGCTCTTCTATACACTCTCTCAATGTaGTCAGACACAGTTCCTTCCATTGTGATAAAGTTAGGGCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DQSFLLPALLYTLSM*SDTVPSIVIKLGPS Trigger: AGAGGGCCCTAACTTTATCACAATGGAAGGAACTGTGTCTGATCACATTGAGAGAGTGTATAGAAGAGCTGGCAGCAAAAAGCTTTGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
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| CDS GCA 90 bp | TCCTTTCAATTTTCTTATCACTTTATCAAGTGTCTGGCTGAACAGTaGTTCATCATCCAAGGCAAACGCAGGGTAACTGATGCACGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SFQFSYHFIKCLAEQ*FIIQGKRRVTDARE Trigger: CTCCCGTGCATCAGTTACCCTGCGTTTGCCTTGGATGATGAAGCACTGTTCAGCCAGACACTTGATAAAGTGATAAGAAAATTGAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS-3UTR CAA 90 bp | TCTCTTCCCTGCCCATCAACCACCAGAAGTTACTCTTTCTGCATGGGCTTCATGATGTCTAATATTGGGTaGAATCTGCTACCTCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: SLPCPSTTRSYSFCMGFMMSNIG*NLLPLM Trigger: CATAAGAGGTAGCAGATTCAACCCAATATTAGACAT...CATGAAGCCCATGCAGAAAGAGTAACTTCTGGTGGTTGATGGGCAGGGAAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS-3UTR CAA 90 bp | TTTGATATTCAGTCAGGAGTTCCAACAGACGTTGATTGTACTATAAACTTAGCAACCCAGCAGGATGGTTaGACCAGCCAGACAACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: FDIQSGVPTDVDCTINLATQQDG*TSQTTA Trigger: TGCGGTTGTCTGGCTGGTCAAACCATCCTGCTGGGT...TGCTAAGTTTATAGTACAATCAACGTCTGTTGGAACTCCTGACTGAATATCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS-3UTR CAA 90 bp | CAGTGCTCTGGAAAAGCAGTTGAATTTGATATTCAGTCAGGAGTTCCAACAGACCATGCTCACGTTACGTaGATTCTGAAGTGGGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: QCSGKAVEFDIQSGVPTDHAHVT*ILKWDK Trigger: TTTGTCCCACTTCAGAATCAACGTAACGTGAGCATG...GTCTGTTGGAACTCCTGACTGAATATCAAATTCAACTGCTTTTCCAGAGCACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS TCA 90 bp | TGCTCTACTACAGCTCCGGATATCAATGTCTGTAAACGATCAACATaGACTTTGACTCCTCCAATTATTCCCTTTTTAAAGGCTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CSTTAPDINVCKRST*TLTPPIIPFLKAAS Trigger: GCTGGCAGCCTTTAAAAAGGGAATAATTGGAGGAGTCAAAGTTCATGTTGATCGTTTACAGACATTGATATCCGGAGCTGTAGTAGAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
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| CDS CCA 90 bp | CTTAATCTCTGCTGGTTTGTAATAGCGTCTGTTGGGATCTTCCAATaGCGTTCTGTACCCATCTCGCAAGAAACGCTTAAATCCATATTT | + |
|
Preference number: 5 (lower is better) Translates to: LNLCWFVIASVGIFQ*RSVPISQETLKSIF Trigger: AAATATGGATTTAAGCGTTTCTTGCGAGATGGGTACAGAACGCCATTGGAAGATCCCAACAGACGCTATTACAAACCAGCAGAGATTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS-3UTR CAA 90 bp | TTTGATATTCAGTCAGGAGTTCCAACAGACGTTGATTGTACTATAAACTTAGCAAACAACTCAGGGCTGTaGGAGATGATCCAGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: FDIQSGVPTDVDCTINLANNSGL*EMIQPM Trigger: CATCGGCTGGATCATCTCCAACAGCCCTGAGTTGTT...TGCTAAGTTTATAGTACAATCAACGTCTGTTGGAACTCCTGACTGAATATCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS CCA 90 bp | ATCGTGGGTATTGCACTTATAATAGATTATGTTCTTAATCACTCTTaGAGACAGTGGGTTAGAGATGACCTCCTCTTCATGTCCAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IVGIALIIDYVLNHS*RQWVRDDLLFMSKG Trigger: GCCTTTGGACATGAAGAGGAGGTCATCTCTAACCCACTGTCTCCAAGAGTGATTAAGAACATAATCTATTATAAGTGCAATACCCACGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
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| CDS-3UTR CAA 90 bp | CTGTATATTCTTCCCAACAGTTTGTTACTCTTTATGCTCAGAAGTCAACCAGAGCTGCTACCTCTTATGTaGTCTTCTCGGATGAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LYILPNSLLLFMLRSQPELLPLM*SSRMRT Trigger: TGTTCTCATCCGAGAAGACAACATAAGAGGTAGCAG...CTCTGGTTGACTTCTGAGCATAAAGAGTAACAAACTGTTGGGAAGAATATACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR CAA 90 bp | CTGTATATTCTTCCCAACAGTTTGTTACTCTTTATGCTCAGAAGTCAACCAGAGCTTTATTTAAAAGACTaGCTGCACGGCGTACAACCG | + |
|
Preference number: 5 (lower is better) Translates to: LYILPNSLLLFMLRSQPELYLKD*LHGVQP Trigger: CGGTTGTACGCCGTGCAGCAAGTCTTTTAAATAAAG...CTCTGGTTGACTTCTGAGCATAAAGAGTAACAAACTGTTGGGAAGAATATACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS GCA 90 bp | AATTCTGGAAGCTTTTCTGTGTCACTAATTCGTAGAAAGTCAAGCTaGTCTACTACAGCTCCGGATATCAATGTCTGTAAACGATCAACA | + |
|
Preference number: 5 (lower is better) Translates to: NSGSFSVSLIRRKSS*STTAPDINVCKRST Trigger: TGTTGATCGTTTACAGACATTGATATCCGGAGCTGTAGTAGAGCAGCTTGACTTTCTACGAATTAGTGACACAGAAAAGCTTCCAGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
||
| CDS-3UTR CAA 90 bp | TTTGATATTCAGTCAGGAGTTCCAACAGACGTTGATTGTACTATAAACTTAGCACTGCTACCTCTTATGTaGTCTTCTCGGATGAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: FDIQSGVPTDVDCTINLALLPLM*SSRMRT Trigger: TGTTCTCATCCGAGAAGACAACATAAGAGGTAGCAG...TGCTAAGTTTATAGTACAATCAACGTCTGTTGGAACTCCTGACTGAATATCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CAA 90 bp | TTTGATATTCAGTCAGGAGTTCCAACAGACGTTGATTGTACTATAAACTTAGCATCATATCCGACAAAGTaGGTTGCTGTGGCAAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: FDIQSGVPTDVDCTINLASYPTK*VAVANA Trigger: AGCATTTGCCACAGCAACCAACTTTGTCGGATATGA...TGCTAAGTTTATAGTACAATCAACGTCTGTTGGAACTCCTGACTGAATATCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CAA 90 bp | TTTGATATTCAGTCAGGAGTTCCAACAGACGTTGATTGTACTATAAACTTAGCACAGATCCACTTTGTCTaGAAACTCCAGTTCAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FDIQSGVPTDVDCTINLAQIHFV*KLQFRV Trigger: AACCCTGAACTGGAGTTTCAAGACAAAGTGGATCTG...TGCTAAGTTTATAGTACAATCAACGTCTGTTGGAACTCCTGACTGAATATCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS-3UTR CAA 90 bp | CTGTATATTCTTCCCAACAGTTTGTTACTCTTTATGCTCAGAAGTCAACCAGAGATGTCTAATATTGGGTaGAATCTGCTACCTCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: LYILPNSLLLFMLRSQPEMSNIG*NLLPLM Trigger: CATAAGAGGTAGCAGATTCAACCCAATATTAGACAT...CTCTGGTTGACTTCTGAGCATAAAGAGTAACAAACTGTTGGGAAGAATATACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160731.2 |
||
| CDS-3UTR CAA 90 bp | ATTGCTTCTGATGGAGGAACATCAAGATTTATTGATCATCCCAAAATATCTTGCCTGAGGAGTTTGGGTTaGAATACCATATGTATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: IASDGGTSRFIDHPKISCLRSLG*NTICIE Trigger: CTCAATACATATGGTATTCAAACCCAAACTCCTCAG...GCAAGATATTTTGGGATGATCAATAAATCTTGATGTTCCTCCATCAGAAGCAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS CCA 72 bp | CACTTCACTGGGCGAGAGCTGGTACAAGTCCACAGCTaGCTTATCCCCGCCCCGGACCTGCAGTTCATACTC | + |
|
Preference number: 6 (lower is better) Translates to: HFTGRELVQVHS*LIPAPDLQFIL Trigger: GAGTATGAACTGCAGGTCCGGGGCGGGGATAAGCCAGCTGTGGACTTGTACCAGCTCTCGCCCAGTGAAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS GCA 72 bp | TACAAGTCCACAGCTGGCTTATCCCCGCCCCGGACCTaGAGTTCATACTCCATGGCGTGGATGATCCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: YKSTAGLSPPRT*SSYSMAWMIHP Trigger: TGGGTGGATCATCCACGCCATGGAGTATGAACTGCAGGTCCGGGGCGGGGATAAGCCAGCTGTGGACTTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS CCA 72 bp | GGTGGATTTGTTTTTCCACTCGGTAATGGTGATGCCTaGCTCGTGTTGCGCCTCAGGAGCATCTGCGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: GGFVFPLGNGDA*LVLRLRSICGT Trigger: AGTACCGCAGATGCTCCTGAGGCGCAACACGAGCCAGGCATCACCATTACCGAGTGGAAAAACAAATCCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
||
| CDS CCA 72 bp | GCTGGAGAATGTCTAGCAGCAGCTGCTTCACTTCACTaGGCGAGAGCTGGTACAAGTCCACAGCTGGCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: AGECLAAAASLH*ARAGTSPQLAY Trigger: ATAAGCCAGCTGTGGACTTGTACCAGCTCTCGCCCAGTGAAGTGAAGCAGCTGCTGCTAGACATTCTCCAGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
||
| CDS CAA 90 bp | GGTGGATTTGTTTTTCCACTCGGTAATGGTGATGCCTGGCTCGTGTaGCGCCTCAGGAGCATCTGCGGTACTGCTCTGCCGTTTGACTTT | + |
|
Preference number: 6 (lower is better) Translates to: GGFVFPLGNGDAWLV*RLRSICGTALPFDF Trigger: AAAGTCAAACGGCAGAGCAGTACCGCAGATGCTCCTGAGGCGCAACACGAGCCAGGCATCACCATTACCGAGTGGAAAAACAAATCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
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| CDS TCA 72 bp | ACAGTGCTTCATCATCCAAGGCAAACGCAGGGTAACTaGTGCACGGGAGCAGGGCAGCATCTGTGTTATGAG | + |
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Preference number: 6 (lower is better) Translates to: TVLHHPRQTQGN*CTGAGQHLCYE Trigger: CTCATAACACAGATGCTGCCCTGCTCCCGTGCATCAGTTACCCTGCGTTTGCCTTGGATGATGAAGCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS TCA 72 bp | GTCCTCATTGCTGGGCTTGACTTCTCCCTCGAGCAGTaGGTTCATCACAACCTTCGTCAAGTAGCTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: VLIAGLDFSLEQ*VHHNLRQVAAG Trigger: ACCTGCAGCTACTTGACGAAGGTTGTGATGAACTCACTGCTCGAGGGAGAAGTCAAGCCCAGCAATGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS GCA 72 bp | CGAGCAGTGAGTTCATCACAACCTTCGTCAAGTAGCTaGAGGTTCCTCTTTTTCCCAGTGGGGGCGTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: RAVSSSQPSSSS*RFLFFPVGACC Trigger: ACAACACGCCCCCACTGGGAAAAAGAGGAACCTGCAGCTACTTGACGAAGGTTGTGATGAACTCACTGCTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS CCA 72 bp | GCAGGGCAGCATCTGTGTTATGAGAGCGTGATTCTCTaGGTAACAGTGAGCACAATGTCTGCCTGTTGCGGT | + |
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Preference number: 6 (lower is better) Translates to: AGQHLCYESVIL*VTVSTMSACCG Trigger: ACCGCAACAGGCAGACATTGTGCTCACTGTTACCCAGAGAATCACGCTCTCATAACACAGATGCTGCCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS CAA 72 bp | TGGGCCCTGATTGGAGTATCTCATGCTCACGTTACGTaGATTCTGAAGTGGGACAAAGCGCTGGACAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: WALIGVSHAHVT*ILKWDKALDRV Trigger: GACCCTGTCCAGCGCTTTGTCCCACTTCAGAATCAACGTAACGTGAGCATGAGATACTCCAATCAGGGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS CAA 90 bp | CTCAGGGCTGTTGGAGATGATCCAGCCGATGTGGATGACCAGTTCTaGCTGAATGACTGCCTCCCTCTCATCGTGGGTATTGCACTTATA | + |
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Preference number: 6 (lower is better) Translates to: LRAVGDDPADVDDQF*LNDCLPLIVGIALI Trigger: TATAAGTGCAATACCCACGATGAGAGGGAGGCAGTCATTCAGCAAGAACTGGTCATCCACATCGGCTGGATCATCTCCAACAGCCCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
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| CDS CAA 72 bp | GTTGGAGATGATCCAGCCGATGTGGATGACCAGTTCTaGCTGAATGACTGCCTCCCTCTCATCGTGGGTATT | + |
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Preference number: 6 (lower is better) Translates to: VGDDPADVDDQF*LNDCLPLIVGI Trigger: AATACCCACGATGAGAGGGAGGCAGTCATTCAGCAAGAACTGGTCATCCACATCGGCTGGATCATCTCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
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| CDS CAA 72 bp | CGTATTTTCAGCATGCCGCTGAACAACTCAGGGCTGTaGGAGATGATCCAGCCGATGTGGATGACCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RIFSMPLNNSGL*EMIQPMWMTSS Trigger: AGAACTGGTCATCCACATCGGCTGGATCATCTCCAACAGCCCTGAGTTGTTCAGCGGCATGCTGAAAATACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
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| CDS CAA 90 bp | GTGCACACTGAAAACAGAGTGAAGACATGTTGTGGGCCGGGGATCTaGTTTAAACTGTTGGACCTTATCAGCCTGCCGCATGTAGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: VHTENRVKTCCGPGI*FKLLDLISLPHVAV Trigger: TACTGCTACATGCGGCAGGCTGATAAGGTCCAACAGTTTAAACAAGATCCCCGGCCCACAACATGTCTTCACTCTGTTTTCAGTGTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053771.14 ENSMUST00000160611.8 ENSMUST00000161850.8 ENSMUST00000162464.3 |
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| CDS GCA 72 bp | TTGCTGCACGGCGTACAACCGACCAAAGCTTTTTGCTaGCAGCTCTTCTATACACTCTCTCAATGTGATCAG | + |
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Preference number: 6 (lower is better) Translates to: LLHGVQPTKAFC*QLFYTLSQCDQ Trigger: CTGATCACATTGAGAGAGTGTATAGAAGAGCTGGCAGCAAAAAGCTTTGGTCGGTTGTACGCCGTGCAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
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| CDS CCA 72 bp | AAGCTTTTACAAGCTCCTGCTGAGGCCAGATCTGAATaGGTTCCACCTGCTGAGGAGTTTGGGTTTGAATAC | + |
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Preference number: 6 (lower is better) Translates to: KLLQAPAEARSE*VPPAEEFGFEY Trigger: GTATTCAAACCCAAACTCCTCAGCAGGTGGAACCCATTCAGATCTGGCCTCAGCAGGAGCTTGTAAAAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS CAA 72 bp | GAAAACAGAGTGAAGACATGTTGTGGGCCGGGGATCTaGTTTAAACTGTTGGACCTTATCAGCCTGCCGCAT | + |
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Preference number: 6 (lower is better) Translates to: ENRVKTCCGPGI*FKLLDLISLPH Trigger: ATGCGGCAGGCTGATAAGGTCCAACAGTTTAAACAAGATCCCCGGCCCACAACATGTCTTCACTCTGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053771.14 ENSMUST00000160611.8 ENSMUST00000161850.8 ENSMUST00000162464.3 |
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| CDS CAA 90 bp | GGCTCGTGTTGCGCCTCAGGAGCATCTGCGGTACTGCTCTGCCGTTaGACTTTTGAATGCTTAGGAAATTCTAGTTCTTCAAAGCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: GSCCASGASAVLLCR*TFECLGNSSSSKLL Trigger: TAAGAGCTTTGAAGAACTAGAATTTCCTAAGCATTCAAAAGTCAAACGGCAGAGCAGTACCGCAGATGCTCCTGAGGCGCAACACGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
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| CDS TCA 72 bp | GGTAACAGTGAGCACAATGTCTGCCTGTTGCGGTTGTaGGCATCGAGATCCACAAATATAACTGACCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: GNSEHNVCLLRL*ASRSTNITDQE Trigger: TTCCTGGTCAGTTATATTTGTGGATCTCGATGCTCACAACCGCAACAGGCAGACATTGTGCTCACTGTTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS CCA 72 bp | GAATGCGATAAATCTTTGATGTACCAAGGCAGCCAATaGGCCTATCTGGCCTTCCAGACAGACCCAACTTTT | + |
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Preference number: 6 (lower is better) Translates to: ECDKSLMYQGSQ*AYLAFQTDPTF Trigger: AAAAGTTGGGTCTGTCTGGAAGGCCAGATAGGCCCATTGGCTGCCTTGGTACATCAAAGATTTATCGCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS TCA 72 bp | GTTGCGGTTGTGAGCATCGAGATCCACAAATATAACTaGCCAGGAACACCCCTGGTTTCCAAAGAGGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: VAVVSIEIHKYN*PGTPLVSKEVK Trigger: TTTAACCTCTTTGGAAACCAGGGGTGTTCCTGGTCAGTTATATTTGTGGATCTCGATGCTCACAACCGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS CCA 72 bp | TGCTGGTTTGTAATAGCGTCTGTTGGGATCTTCCAATaGCGTTCTGTACCCATCTCGCAAGAAACGCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: CWFVIASVGIFQ*RSVPISQETLK Trigger: TTTAAGCGTTTCTTGCGAGATGGGTACAGAACGCCATTGGAAGATCCCAACAGACGCTATTACAAACCAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS TCA 72 bp | CACTCGGTCATAGAATTCCGGGGGTGTTCTATTCAATaGCCCATCAATCTGACGTCTATTCAACCAACATCT | + |
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Preference number: 6 (lower is better) Translates to: HSVIEFRGCSIQ*PINLTSIQPTS Trigger: AGATGTTGGTTGAATAGACGTCAGATTGATGGGTCATTGAATAGAACACCCCCGGAATTCTATGACCGAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS CAA 72 bp | GATCTGAATGGGTTCCACCTGCTGAGGAGTTTGGGTTaGAATACCATATGTATTGAGAAAAACTTGAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: DLNGFHLLRSLG*NTICIEKNLKA Trigger: CGCCTTCAAGTTTTTCTCAATACATATGGTATTCAAACCCAAACTCCTCAGCAGGTGGAACCCATTCAGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS CAA 72 bp | GAACATACGTTGATCAGAAACTTTGGGACACATGACTaGAGACCAGACCTTAACAAAGCAGGTGAAGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: EHTLIRNFGTHD*RPDLNKAGEEK Trigger: CTTCTCTTCACCTGCTTTGTTAAGGTCTGGTCTCAAGTCATGTGTCCCAAAGTTTCTGATCAACGTATGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162981.2 |
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| CDS GCA 72 bp | TTTTCTTATCACTTTATCAAGTGTCTGGCTGAACAGTaGTTCATCATCCAAGGCAAACGCAGGGTAACTGAT | + |
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Preference number: 6 (lower is better) Translates to: FSYHFIKCLAEQ*FIIQGKRRVTD Trigger: ATCAGTTACCCTGCGTTTGCCTTGGATGATGAAGCACTGTTCAGCCAGACACTTGATAAAGTGATAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS GCA 72 bp | TCTTCTCGGATGAGAACAAGAAAAAGTGGGCGTCCATaGATTTTCCAATATTGCTTAATGAACTGTAGTGCG | + |
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Preference number: 6 (lower is better) Translates to: SSRMRTRKSGRP*IFQYCLMNCSA Trigger: CGCACTACAGTTCATTAAGCAATATTGGAAAATGCATGGACGCCCACTTTTTCTTGTTCTCATCCGAGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
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| CDS CAA 90 bp | GGTCTGATGAAGCAAAGGTGTCAAAAGGTCCTGATATTCCTTGACTaGTTCAAGATTGCCTCTAAAAACACCATCGATCATCATGTAAAG | + |
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Preference number: 6 (lower is better) Translates to: GLMKQRCQKVLIFLD*FKIASKNTIDHHVK Trigger: CTTTACATGATGATCGATGGTGTTTTTAGAGGCAATCTTGAACAAGTCAAGGAATATCAGGACCTTTTGACACCTTTGCTTCATCAGACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS GCA 72 bp | AGCTTTTCTGTGTCACTAATTCGTAGAAAGTCAAGCTaGTCTACTACAGCTCCGGATATCAATGTCTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: SFSVSLIRRKSS*STTAPDINVCK Trigger: TTTACAGACATTGATATCCGGAGCTGTAGTAGAGCAGCTTGACTTTCTACGAATTAGTGACACAGAAAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
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| CDS CCA 72 bp | ATAATAGATTATGTTCTTAATCACTCTTGGAGACAGTaGGTTAGAGATGACCTCCTCTTCATGTCCAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: IIDYVLNHSWRQ*VRDDLLFMSKG Trigger: GCCTTTGGACATGAAGAGGAGGTCATCTCTAACCCACTGTCTCCAAGAGTGATTAAGAACATAATCTATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
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| CDS TCA 72 bp | TTTTTGCTGCCAGCTCTTCTATACACTCTCTCAATGTaGTCAGACACAGTTCCTTCCATTGTGATAAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: FLLPALLYTLSM*SDTVPSIVIKL Trigger: TAACTTTATCACAATGGAAGGAACTGTGTCTGATCACATTGAGAGAGTGTATAGAAGAGCTGGCAGCAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
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| CDS CAA 72 bp | AAGCAAAGGTGTCAAAAGGTCCTGATATTCCTTGACTaGTTCAAGATTGCCTCTAAAAACACCATCGATCAT | + |
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Preference number: 6 (lower is better) Translates to: KQRCQKVLIFLD*FKIASKNTIDH Trigger: ATGATCGATGGTGTTTTTAGAGGCAATCTTGAACAAGTCAAGGAATATCAGGACCTTTTGACACCTTTGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053771.14 |
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| CDS TCA 72 bp | ACAGCTCCGGATATCAATGTCTGTAAACGATCAACATaGACTTTGACTCCTCCAATTATTCCCTTTTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: TAPDINVCKRST*TLTPPIIPFLK Trigger: CTTTAAAAAGGGAATAATTGGAGGAGTCAAAGTTCATGTTGATCGTTTACAGACATTGATATCCGGAGCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053771.14 ENSMUST00000160731.2 |
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