Pregenerated sensors for PHKA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031295Ensembl transcript IDs: ENSMUST00000033652.9, ENSMUST00000112376.2, ENSMUST00000112377.8, ENSMUST00000112380.9, ENSMUST00000139587.8
Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGCTGTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTaGTCAGGAGGAATTTGTGGCCCATCAGCAACTCCCCCAGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: WAVTQGPESLMGLGL*SGGICGPSATPPGF Trigger: AAAGCCTGGGGGAGTTGCTGATGGGCCACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGACAGCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR TCA 90 bp | GAGGAATTTGTGGCCCATCAGCAACTCCCCCAGGCTTTGCTGGACTaGTTTATGACAGCTCCTTGGAAGCTGAAGACTGTGTGGTGGGGT | + |
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Preference number: 1 (lower is better) Translates to: EEFVAHQQLPQALLD*FMTAPWKLKTVWWG Trigger: ACCCCACCACACAGTCTTCAGCTTCCAAGGAGCTGTCATAAATCAGTCCAGCAAAGCCTGGGGGAGTTGCTGATGGGCCACAAATTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR CAA 90 bp | AGATGGGCTGTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTaGTGGTCAGGAGGAATTTGTGGCCCATCAGCAACTCCCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: RWAVTQGPESLMGLG*WSGGICGPSATPPG Trigger: GCCTGGGGGAGTTGCTGATGGGCCACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGACAGCCCATCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTCTGAAGACTGTGTGGTaGGGTTGGGTGGGGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: TQGPESLMGLGLWSGGICLKTVW*GWVGLS Trigger: GGACAGCCCCACCCAACCCCACCACACAGTCTTCAG...ACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR CAA 90 bp | GGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTaGTGGCCCATCAGCAACTCCCCCAGGCTTTGCTGGACTGATTTA | + |
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Preference number: 2 (lower is better) Translates to: GSREPNGAGFVVRRN*WPISNSPRLCWTDL Trigger: TAAATCAGTCCAGCAAAGCCTGGGGGAGTTGCTGATGGGCCACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGCCTAATGGGGCAGCTCCTTGGAAGCTaGAGACTGTGTGGTGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: FASCSRWAVTQGPESLMGQLLGS*RLCGGV Trigger: AACCCCACCACACAGTCTTCAGCTTCCAAGGAGCTG...CCCCATTAGGCTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCTTAAAAGGAACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTTGTGGTGGGGTTGGGTaGGGCTGTCCCTGGACACCA | + |
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Preference number: 2 (lower is better) Translates to: GLKRNEVTIICILFQMGCCGGVG*GCPWTP Trigger: TGGTGTCCAGGGACAGCCCCACCCAACCCCACCACA...ACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTTCCTTTTAAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAATGGGGCTGGGTTTGTaGTCAGGAGGAATTTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: SDNHLHLVPDGLSLRVQRMGLGL*SGGICG Trigger: GCCACAAATTCCTCCTGACCACAAACCCAGCCCCAT...TCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR-3UTR TCA 90 bp | GGGCTTAAAAGGAACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTACACCAGTGGCAATCTaGCAACTGTGGCTCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GLKRNEVTIICILFQMGCTPVAI*QLWLSS Trigger: GCTGCTGAGCCACAGTTGTCAGATTGCCACTGGTGT...ACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTTCCTTTTAAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCTTAAAAGGAACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTGTCCCTGGACACCAGTaGCAATCTGACAACTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: GLKRNEVTIICILFQMGCVPGHQ*QSDNCG Trigger: GCCACAGTTGTCAGATTGCCACTGGTGTCCAGGGAC...ACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTTCCTTTTAAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGATTTATGACAGCTCCTTaGAAGCTGAAGACTGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: SDNHLHLVPDGLSLRVQRFMTAP*KLKTVW Trigger: CCACACAGTCTTCAGCTTCCAAGGAGCTGTCATAAA...TCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR CAA 90 bp | TCTATACCTCCATCTGATCCTTTGCATACAAAATTCTTCCATGTTTaGACACAGAAATGCTTACCAGACAGAAAAGAGAACCTAATAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SIPPSDPLHTKFFHV*TQKCLPDRKENLIR Trigger: TCTTATTAGGTTCTCTTTTCTGTCTGGTAAGCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGGATCAGATGGAGGTATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGGACTGTGTGGTGGGGTaGGGTGGGGCTGTCCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: ILFQMGCHSGSREPNGAGDCVVG*GGAVPG Trigger: TCCAGGGACAGCCCCACCCAACCCCACCACACAGTC...CCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR TCA 72 bp | GTTGGGTGGGGCTGTCCCTGGACACCAGTGGCAATCTaGCAACTGTGGCTCAGCAGCTGCACTTCCAAAGAG | + |
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Preference number: 3 (lower is better) Translates to: VGWGCPWTPVAI*QLWLSSCTSKE Trigger: CTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGATTGCCACTGGTGTCCAGGGACAGCCCCACCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR CCA 72 bp | ACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTaGTCAGGAGGAATTTGTGGCCCATCAGCAACTCCC | + |
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Preference number: 3 (lower is better) Translates to: TQGPESLMGLGL*SGGICGPSATP Trigger: GGGAGTTGCTGATGGGCCACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR TCA 72 bp | GTGGCCCATCAGCAACTCCCCCAGGCTTTGCTGGACTaGTTTATGACAGCTCCTTGGAAGCTGAAGACTGTG | + |
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Preference number: 3 (lower is better) Translates to: VAHQQLPQALLD*FMTAPWKLKTV Trigger: CACAGTCTTCAGCTTCCAAGGAGCTGTCATAAATCAGTCCAGCAAAGCCTGGGGGAGTTGCTGATGGGCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR-3UTR CAA 90 bp | ACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTATTTATGACAGCTCCTaGGAAGCTGAAGACTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TQGPESLMGLGLWSGGICIYDSS*EAEDCV Trigger: CACACAGTCTTCAGCTTCCAAGGAGCTGTCATAAAT...ACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CCA 90 bp | GTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTCTCCGGCGCAGCCACTaGCCCTGCTGTTCTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTQGPESLMGLGLWSGGILRRSH*PCCSPQ Trigger: CTGGGGAGAACAGCAGGGCCAGTGGCTGCGCCGGAG...AATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CCA 90 bp | GGCAGGGTCTCACAGCATAGCCCCAGCTGGTCTGAAACTCATGTAGACCAGACTGCATCCACCTGGAGGTaGCCCCACTGGTCATCACCC | + |
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Preference number: 4 (lower is better) Translates to: GRVSQHSPSWSETHVDQTASTWR*PHWSSP Trigger: GGGTGATGACCAGTGGGGCCACCTCCAGGTGGATGC...AGTCTGGTCTACATGAGTTTCAGACCAGCTGGGGCTATGCTGTGAGACCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR GCA 90 bp | TCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTGGTCTTGCGGTAGGCCATaGCCAGGCCCCAAACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SGSREPNGAGFVVRRNLWSCGRP*PGPKQP Trigger: TGGCTGTTTGGGGCCTGGGCATGGCCTACCGCAAGA...CCACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR GCA 90 bp | GTAGACCAGACTGGCCTTGAACTCATAGAGTCTCGCCAGTCTTTGCCTCCCCAGCACGGTCAGCATTCTTaGGGTAGGCCATGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VDQTGLELIESRQSLPPQHGQHS*GRPCPG Trigger: GCCTGGGCATGGCCTACCGCAAGAATGCTGACCGTG...CTGGGGAGGCAAAGACTGGCGAGACTCTATGAGTTCAAGGCCAGTCTGGTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR CCA 90 bp | ACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTGCATCCACCTGGAGGTaGCCCCACTGGTCATCACCC | + |
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Preference number: 4 (lower is better) Translates to: TQGPESLMGLGLWSGGICASTWR*PHWSSP Trigger: GGGTGATGACCAGTGGGGCCACCTCCAGGTGGATGC...ACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR CAA 72 bp | GAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTaGTGGCCCATCAGCAACTCCCCCAGGCTTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: EPNGAGFVVRRN*WPISNSPRLCW Trigger: CCAGCAAAGCCTGGGGGAGTTGCTGATGGGCCACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR GCA 90 bp | TTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGCCTAATGGGGCACAGGATGGTTTGCTaGACCAGCCTCGCGTACCCG | + |
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Preference number: 4 (lower is better) Translates to: FASCSRWAVTQGPESLMGHRMVC*TSLAYP Trigger: CGGGTACGCGAGGCTGGTGCAGCAAACCATCCTGTG...CCCCATTAGGCTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR GCA 90 bp | GTAGACCAGACTGGCCTTGAACTCATAGAGTCTCGCCAGTCTTTGCCTCCCCAGAATGGCCTCAAGTGCTaGCTTGGCCACTCCCACCGA | + |
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Preference number: 4 (lower is better) Translates to: VDQTGLELIESRQSLPPQNGLKC*LGHSHR Trigger: TCGGTGGGAGTGGCCAAGGCAGCACTTGAGGCCATT...CTGGGGAGGCAAAGACTGGCGAGACTCTATGAGTTCAAGGCCAGTCTGGTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR GCA 90 bp | CCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTGGCCCATCAAATGGCCTCAAGTGCTaGCTTGGCCACTCCCACCGA | + |
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Preference number: 4 (lower is better) Translates to: PESLMGLGLWSGGICGPSNGLKC*LGHSHR Trigger: TCGGTGGGAGTGGCCAAGGCAGCACTTGAGGCCATT...TGATGGGCCACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR GCA 90 bp | AACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCCGCAGCCACTGGCCCTaGTGTTCTCCCCAGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: NEVTIICILFQMGCHSGSRSHWP*CSPQPR Trigger: CCTGGGCTGGGGAGAACAGCAGGGCCAGTGGCTGCG...GGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR CAA 72 bp | CCCCCAGGCTTTGCTGGACTGATTTATGACAGCTCCTaGGAAGCTGAAGACTGTGTGGTGGGGTTGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PPGFAGLIYDSS*EAEDCVVGLGG Trigger: CCCACCCAACCCCACCACACAGTCTTCAGCTTCCAAGGAGCTGTCATAAATCAGTCCAGCAAAGCCTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR TCA 90 bp | GGCCCATCAGCAACTCCCCCAGGCTTTGCTGGACTGATTTATGACAGCTCCTTGTCCTGCAGGAACAGCTaGTTGGCCAGCTGCACTATC | + |
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Preference number: 4 (lower is better) Translates to: GPSATPPGFAGLIYDSSLSCRNS*LASCTI Trigger: GATAGTGCAGCTGGCCAATCAGCTGTTCCTGCAGGA...CAAGGAGCTGTCATAAATCAGTCCAGCAAAGCCTGGGGGAGTTGCTGATGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR GCA 90 bp | GTAGACCAGACTGGCCTTGAACTCATAGAGTCTCGCCAGTCTTTGCCTCCCCAGCGTGGATCACCGATTTaGGTCCTCCATGGGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: VDQTGLELIESRQSLPPQRGSPI*VLHGLQ Trigger: TTGGAGCCCATGGAGGACGCAAATCGGTGATCCACG...CTGGGGAGGCAAAGACTGGCGAGACTCTATGAGTTCAAGGCCAGTCTGGTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR CCA 90 bp | ACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTCCTGAGGCTGTCATCTaGGCCAGGAACAGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: TQGPESLMGLGLWSGGICPEAVI*ARNRRK Trigger: CTTCCTCCTGTTCCTGGCCCAGATGACAGCCTCAGG...ACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CCA 90 bp | GGCAGGGTCTCACAGCATAGCCCCAGCTGGTCTGAAACTCATGTAGACCAGACTGGGCAGCTTTCCCAGTaGAACTCGGTCTACTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: GRVSQHSPSWSETHVDQTGQLSQ*NSVYCV Trigger: CACACAGTAGACCGAGTTCCACTGGGAAAGCTGCCC...AGTCTGGTCTACATGAGTTTCAGACCAGCTGGGGCTATGCTGTGAGACCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR CCA 90 bp | GTAGACCAGACTGGCCTTGAACTCATAGAGTCTCGCCAGTCTTTGCCTCCCCAGGACTGTCCCCAAAGATaGGGCAGCTTTCCCAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: VDQTGLELIESRQSLPPQDCPQR*GSFPSG Trigger: TCCACTGGGAAAGCTGCCCCATCTTTGGGGACAGTC...CTGGGGAGGCAAAGACTGGCGAGACTCTATGAGTTCAAGGCCAGTCTGGTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR CCA 90 bp | GTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTCAGTCCACTTCATCATaGTCGTCTCTGGGCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: VTQGPESLMGLGLWSGGIQSTSS*SSLGHW Trigger: CCAGTGGCCCAGAGACGACCATGATGAAGTGGACTG...AATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CCA 90 bp | ACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTCCTCATGGATGGAGATaGCAGGGCTGGACATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TQGPESLMGLGLWSGGICPHGWR*QGWTWR Trigger: CCTCCATGTCCAGCCCTGCCATCTCCATCCATGAGG...ACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CCA 90 bp | GTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGGCCTGTCGGGGAGGATaGGGTGCTGGACCTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: VTIICILFQMGCHSGSREACRGG*GAGPHR Trigger: TCTGTGAGGTCCAGCACCCCATCCTCCCCGACAGGC...CTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| 3UTR CAA 72 bp | GTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTaGTGGTCAGGAGGAATTTGTGGCCCATCAGCAACT | + |
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Preference number: 4 (lower is better) Translates to: VTQGPESLMGLG*WSGGICGPSAT Trigger: AGTTGCTGATGGGCCACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR TCA 90 bp | GGCAGGGTCTCACAGCATAGCCCCAGCTGGTCTGAAACTCATGTAGACCAGACTCTGCTAGCAGTGAGCTaGGGATGTACAAGGACTGTC | + |
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Preference number: 4 (lower is better) Translates to: GRVSQHSPSWSETHVDQTLLAVS*GCTRTV Trigger: GACAGTCCTTGTACATCCTCAGCTCACTGCTAGCAG...AGTCTGGTCTACATGAGTTTCAGACCAGCTGGGGCTATGCTGTGAGACCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR TCA 90 bp | TCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTGGCCTCCACTTTCTTCCTaGGCAGGCCTGAAATGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SGSREPNGAGFVVRRNLWPPLSS*AGLKCS Trigger: GCTACATTTCAGGCCTGCTCAGGAAGAAAGTGGAGG...CCACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR TCA 90 bp | GTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGGCCATCACCTGGATaGTCAATCCAATCCGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: VTQGPESLMGLGLWSGGIWPSPG*SIQSGV Trigger: GACTCCGGATTGGATTGATCATCCAGGTGATGGCCA...AATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR TCA 90 bp | ATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGCATGGACGGCAAACTTaGTCTCACAAGGGGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: ILFQMGCHSGSREPNGAGHGRQT*SHKGSS Trigger: AGATGACCCCTTGTGAGATCAAGTTTGCCGTCCATG...CCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR GCA 90 bp | ACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTCGTGGATCACCGATTTaGGTCCTCCATGGGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: TQGPESLMGLGLWSGGICRGSPI*VLHGLQ Trigger: TTGGAGCCCATGGAGGACGCAAATCGGTGATCCACG...ACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CCA 90 bp | GGCAGGGTCTCACAGCATAGCCCCAGCTGGTCTGAAACTCATGTAGACCAGACTTCTGGTAACACAGGATaGTTTGCTGCACCAGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: GRVSQHSPSWSETHVDQTSGNTG*FAAPAS Trigger: CGAGGCTGGTGCAGCAAACCATCCTGTGTTACCAGA...AGTCTGGTCTACATGAGTTTCAGACCAGCTGGGGCTATGCTGTGAGACCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR CCA 90 bp | GGCAGGGTCTCACAGCATAGCCCCAGCTGGTCTGAAACTCATGTAGACCAGACTACCCAGGCATCCTTCTaGTCATGGCTGGCTGATAAC | + |
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Preference number: 4 (lower is better) Translates to: GRVSQHSPSWSETHVDQTTQASF*SWLADN Trigger: GTTATCAGCCAGCCATGACCAGAAGGATGCCTGGGT...AGTCTGGTCTACATGAGTTTCAGACCAGCTGGGGCTATGCTGTGAGACCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR CCA 90 bp | GTAGACCAGACTGGCCTTGAACTCATAGAGTCTCGCCAGTCTTTGCCTCCCCAGCCGGAATGCCCTGATTaGTTTTATCTCCACGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VDQTGLELIESRQSLPPQPECPD*FYLHAP Trigger: GGGAGCGTGGAGATAAAACCAATCAGGGCATTCCGG...CTGGGGAGGCAAAGACTGGCGAGACTCTATGAGTTCAAGGCCAGTCTGGTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR CCA 90 bp | GTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTGGACGTAACCATCGATaGACAGGCCATGGCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: VTQGPESLMGLGLWSGGIGRNHR*TGHGTS Trigger: AGAAGTGCCATGGCCTGTCCATCGATGGTTACGTCC...AATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CCA 90 bp | TTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGCCTAATGGGGCAAGGGGTCATCTCTTaGGTTGTCGAGGATGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FASCSRWAVTQGPESLMGQGVIS*VVEDGR Trigger: CCTCCCATCCTCGACAACCCAAGAGATGACCCCTTG...CCCCATTAGGCTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CCA 90 bp | TTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGCCTAATGGGGTGCCGATACTCAGGCTaGGACACACGGTTGAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FASCSRWAVTQGPESLMGCRYSG*DTRLST Trigger: AGTGCTCAACCGTGTGTCCCAGCCTGAGTATCGGCA...CCCCATTAGGCTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGTCTCACAGCATAGCCCCAGCTGGTCTGAAACTCATGTAGACCAGACTCTGTCCTTGGTACTCTaGGTGTGCTTGAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRVSQHSPSWSETHVDQTLSLVL*VCLNFS Trigger: GGAGAAGTTCAAGCACACTCAGAGTACCAAGGACAG...AGTCTGGTCTACATGAGTTTCAGACCAGCTGGGGCTATGCTGTGAGACCCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR TCA 90 bp | ATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGCTTCCTGAGCAGGCCTaGAATGTAGCGAATCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: ILFQMGCHSGSREPNGAGLPEQA*NVANQT Trigger: AGTTTGATTCGCTACATTTCAGGCCTGCTCAGGAAG...CCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGCCTAATGGGGATCCAATCCGGAGTCTaGGCATCTCTGCAAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FASCSRWAVTQGPESLMGIQSGV*ASLQRG Trigger: GCCTCTTTGCAGAGATGCTCAGACTCCGGATTGGAT...CCCCATTAGGCTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR TCA 90 bp | ACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTTCATGTCGAAAGGGCTaGGGTTCATCAAGCTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TQGPESLMGLGLWSGGICSCRKG*GSSSSP Trigger: CGGAGAGCTTGATGAACCTCAGCCCTTTCGACATGA...ACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CCA 90 bp | GTAGACCAGACTGGCCTTGAACTCATAGAGTCTCGCCAGTCTTTGCCTCCCCAGTGCCTCATCATACACTaGAGAAGACCTCGCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VDQTGLELIESRQSLPPQCLIIH*RRPRIS Trigger: GCTGATGCGAGGTCTTCTCCAGTGTATGATGAGGCA...CTGGGGAGGCAAAGACTGGCGAGACTCTATGAGTTCAAGGCCAGTCTGGTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR CCA 90 bp | GGCAGGGTCTCACAGCATAGCCCCAGCTGGTCTGAAACTCATGTAGACCAGACTATCCACCTTGTCTGGTaGGATGGCATAGAGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRVSQHSPSWSETHVDQTIHLVW*DGIEFW Trigger: CCAGAACTCTATGCCATCCCACCAGACAAGGTGGAT...AGTCTGGTCTACATGAGTTTCAGACCAGCTGGGGCTATGCTGTGAGACCCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTGGCCCATCAATCCACCTTGTCTGGTaGGATGGCATAGAGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PESLMGLGLWSGGICGPSIHLVW*DGIEFW Trigger: CCAGAACTCTATGCCATCCCACCAGACAAGGTGGAT...TGATGGGCCACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | TCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTCATCATGGTCGTCTCTaGGCCACTGGTAGTCATATT | + |
|
Preference number: 4 (lower is better) Translates to: SCSRWAVTQGPESLMGLGHHGRL*ATGSHI Trigger: AATATGACTACCAGTGGCCCAGAGACGACCATGATG...ACCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | ACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTGCAGGAACAGCTGATTaGCCAGCTGCACTATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TQGPESLMGLGLWSGGICAGTAD*PAALSG Trigger: ACCAGATAGTGCAGCTGGCCAATCAGCTGTTCCTGC...ACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGTCTCACAGCATAGCCCCAGCTGGTCTGAAACTCATGTAGACCAGACTCGGTATTCTTGGACCTaGACAGCATCACCATTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRVSQHSPSWSETHVDQTRYSWT*TASPLK Trigger: CTTCAATGGTGATGCTGTTCAGGTCCAAGAATACCG...AGTCTGGTCTACATGAGTTTCAGACCAGCTGGGGCTATGCTGTGAGACCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR TCA 90 bp | GTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGCACTCCTCAGTCTGGTaGTGCCACTCCGCTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTIICILFQMGCHSGSREHSSVW*CHSAQF Trigger: AAACTGAGCGGAGTGGCATCACCAGACTGAGGAGTG...CTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR TCA 90 bp | GTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGGACCTCACAGACTTaGTGGAATGCAAACTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTQGPESLMGLGLWSGGIWTSQT*WNANCW Trigger: CCAACAGTTTGCATTCCATCAAGTCTGTGAGGTCCA...AATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR GCA 90 bp | GGACACCAGTGGCAATCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAGGCTTTCTTGAGGACTaGTGTCTTCCAGGTATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHQWQSDNCGSAAALPKRGFLED*CLPGIL Trigger: GAGGATACCTGGAAGACAGCAGTCCTCAAGAAAGCC...TCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGATTGCCACTGGTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR GCA 90 bp | TTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGCCTAATGGGGCCCAAAGGAAAGAACTaGTCATCAGCACTAGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FASCSRWAVTQGPESLMGPKGKN*SSALAR Trigger: GCGAGCTAGTGCTGATGAGCAGTTCTTTCCTTTGGG...CCCCATTAGGCTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CCA 90 bp | GGCAGGGTCTCACAGCATAGCCCCAGCTGGTCTGAAACTCATGTAGACCAGACTGATCTAGTTCATCAATaGCCTCAAGTGCTGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRVSQHSPSWSETHVDQTDLVHQ*PQVLPW Trigger: CCAAGGCAGCACTTGAGGCCATTGATGAACTAGATC...AGTCTGGTCTACATGAGTTTCAGACCAGCTGGGGCTATGCTGTGAGACCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR CCA 90 bp | GGCAGGGTCTCACAGCATAGCCCCAGCTGGTCTGAAACTCATGTAGACCAGACTTTCATCCACCTTGTCTaGTGGGATGGCATAGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRVSQHSPSWSETHVDQTFIHLV*WDGIEF Trigger: GAACTCTATGCCATCCCACCAGACAAGGTGGATGAA...AGTCTGGTCTACATGAGTTTCAGACCAGCTGGGGCTATGCTGTGAGACCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR CCA 90 bp | GTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGGGGCAGCTTTCCCAGTaGAACTCGGTCTACTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTIICILFQMGCHSGSREGQLSQ*NSVYCV Trigger: CACACAGTAGACCGAGTTCCACTGGGAAAGCTGCCC...CTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | GGACACCAGTGGCAATCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAGATCGATTTCACCCGTaGCAAGGAATCCCTCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GHQWQSDNCGSAAALPKRDRFHP*QGIPLL Trigger: TAGCAGAGGGATTCCTTGCCACGGGTGAAATCGATC...TCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGATTGCCACTGGTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CCA 90 bp | GCAACTCCCCCAGGCTTTGCTGGACTGATTTATGACAGCTCCTTGGAAGCTGAAGTAAGCTGCTTCTGGTaGGACAGCAGATCTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ATPPGFAGLIYDSSLEAEVSCFW*DSRSAQ Trigger: CTGTGCAGATCTGCTGTCCCACCAGAAGCAGCTTAC...TTCAGCTTCCAAGGAGCTGTCATAAATCAGTCCAGCAAAGCCTGGGGGAGTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGGCAATCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCGGGCCCGGACATACATaGCCAGGTAAACCACGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QWQSDNCGSAAALPKRISGPGHT*PGKPRS Trigger: AGATCGTGGTTTACCTGGCCATGTATGTCCGGGCCC...GCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGATTGCCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CCA 90 bp | ACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTACTATCTGGTCCACATaGATGATGCCCCCGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: TQGPESLMGLGLWSGGICTIWST*MMPPIL Trigger: CAGTATCGGGGGCATCATCCATGTGGACCAGATAGT...ACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR TCA 90 bp | GGCAGGGTCTCACAGCATAGCCCCAGCTGGTCTGAAACTCATGTAGACCAGACTCATGGAGAAAAGAATTaGCTGGCAGTGCTCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRVSQHSPSWSETHVDQTHGEKN*LAVLNF Trigger: GAAGTTGAGCACTGCCAGTCAATTCTTTTCTCCATG...AGTCTGGTCTACATGAGTTTCAGACCAGCTGGGGCTATGCTGTGAGACCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR TCA 90 bp | GGACACCAGTGGCAATCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGACGGTATTCTTGGACCTaGACAGCATCACCATTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GHQWQSDNCGSAAALPKRRYSWT*TASPLK Trigger: CTTCAATGGTGATGCTGTTCAGGTCCAAGAATACCG...TCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGATTGCCACTGGTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR TCA 90 bp | GTAGACCAGACTGGCCTTGAACTCATAGAGTCTCGCCAGTCTTTGCCTCCCCAGTCCCATCTTTGCCTCTaGTTAATATTCCCTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VDQTGLELIESRQSLPPQSHLCL*LIFPPR Trigger: CCTTGGAGGGAATATTAATCAGAGGCAAAGATGGGA...CTGGGGAGGCAAAGACTGGCGAGACTCTATGAGTTCAAGGCCAGTCTGGTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR TCA 90 bp | GTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTCCCATCTTTGCCTCTaGTTAATATTCCCTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTQGPESLMGLGLWSGGISHLCL*LIFPPR Trigger: CCTTGGAGGGAATATTAATCAGAGGCAAAGATGGGA...AATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR TCA 90 bp | ATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTCAAGGATGTGCTTTaGAGAAGGTGGCTGATATAC | + |
|
Preference number: 4 (lower is better) Translates to: ILFQMGCHSGSREPNGAGFKDVL*RRWLIY Trigger: GTATATCAGCCACCTTCTTCAAAGCACATCCTTGAA...CCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CCA 90 bp | GTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGCCGGAATGCCCTGATTaGTTTTATCTCCACGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VTIICILFQMGCHSGSREPECPD*FYLHAP Trigger: GGGAGCGTGGAGATAAAACCAATCAGGGCATTCCGG...CTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CCA 90 bp | GGCCCATCAGCAACTCCCCCAGGCTTTGCTGGACTGATTTATGACAGCTCCTTGGATTTGCGTCCTCCATaGGCTCCAAAAAGATCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPSATPPGFAGLIYDSSLDLRPP*APKRSS Trigger: ACTAGATCTTTTTGGAGCCCATGGAGGACGCAAATC...CAAGGAGCTGTCATAAATCAGTCCAGCAAAGCCTGGGGGAGTTGCTGATGGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CCA 90 bp | CCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTGGCCCATCACCAAACCCTTCGCTTTaGCCATCACAGAAAGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: PESLMGLGLWSGGICGPSPNPSL*PSQKVC Trigger: ACATACTTTCTGTGATGGCCAAAGCGAAGGGTTTGG...TGATGGGCCACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CCA 90 bp | ACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTAGCACTGACTCCACATaGACGGCAAACTTGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TQGPESLMGLGLWSGGICSTDST*TANLIS Trigger: TGAGATCAAGTTTGCCGTCCATGTGGAGTCAGTGCT...ACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGCCTAATGGGGAGTTTGGCATATATGTaGCTAAGAATTCGGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FASCSRWAVTQGPESLMGSLAYM*LRIRPG Trigger: GCCAGGCCGAATTCTTAGTCACATATATGCCAAACT...CCCCATTAGGCTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR TCA 90 bp | GTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGGTCTTTAGGAGTGGCTaGGGGGAGTCAACAAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: VTIICILFQMGCHSGSREVFRSG*GESTRF Trigger: GAATCTTGTTGACTCCCCTCAGCCACTCCTAAAGAC...CTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGTCTCACAGCATAGCCCCAGCTGGTCTGAAACTCATGTAGACCAGACTGTTCACATCTTCTACTaGAAAGGCCGGGAAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GRVSQHSPSWSETHVDQTVHIFY*KGRERN Trigger: ATTTCTTTCCCGGCCTTTGCAGTAGAAGATGTGAAC...AGTCTGGTCTACATGAGTTTCAGACCAGCTGGGGCTATGCTGTGAGACCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR GCA 90 bp | CAGTGGCAATCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCTGGACTCGAATCGGATaGACATCAGCAATGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QWQSDNCGSAAALPKRISWTRIG*TSAMLW Trigger: CCAGAGCATTGCTGATGTGCATCCGATTCGAGTCCA...GCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGATTGCCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR GCA 90 bp | AAAAGGAACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAGTGGGACAGCAGATCTaGACAGGCCTCAGCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KRNEVTIICILFQMGCHSVGQQI*TGLSQD Trigger: GTCCTGGCTGAGGCCTGTGCAGATCTGCTGTCCCAC...TGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTTCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | AACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCTCTGGTAACACAGGATaGTTTGCTGCACCAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NEVTIICILFQMGCHSGSSGNTG*FAAPAS Trigger: CGAGGCTGGTGCAGCAAACCATCCTGTGTTACCAGA...GGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CCA 90 bp | GCAACTCCCCCAGGCTTTGCTGGACTGATTTATGACAGCTCCTTGGAAGCTGAAGATCTAGTTCATCAATaGCCTCAAGTGCTGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATPPGFAGLIYDSSLEAEDLVHQ*PQVLPW Trigger: CCAAGGCAGCACTTGAGGCCATTGATGAACTAGATC...TTCAGCTTCCAAGGAGCTGTCATAAATCAGTCCAGCAAAGCCTGGGGGAGTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | AACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGTCTTGCGACTGTCCCCAAAGATaGGGCAGCTTTCCCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NCGSAAALPKRISIQLSCDCPQR*GSFPSG Trigger: TCCACTGGGAAAGCTGCCCCATCTTTGGGGACAGTC...GCAAGACAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | AGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGATGGAGATGGCAGGGCTaGACATGGAGGAGTGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: SDNHLHLVPDGLSLRVQRWRWQG*TWRSVL Trigger: CAATACACTCCTCCATGTCCAGCCCTGCCATCTCCA...TCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | GGGCTTAAAAGGAACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTGACCCACCTCATGGATaGAGATGGCAGGGCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GLKRNEVTIICILFQMGCDPPHG*RWQGWT Trigger: TGTCCAGCCCTGCCATCTCCATCCATGAGGTGGGTC...ACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTTCCTTTTAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | AACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGTCTTGCGCCAGCTGCACTATCTaGTCCACATGGATGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NCGSAAALPKRISIQLSCASCTI*STWMMP Trigger: GGGCATCATCCATGTGGACCAGATAGTGCAGCTGGC...GCAAGACAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR TCA 90 bp | GGCCCATCAGCAACTCCCCCAGGCTTTGCTGGACTGATTTATGACAGCTCCTTGGATTTCTTTAGATGTTaGTGCTCTTGGCAACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPSATPPGFAGLIYDSSLDFFRC*CSWQHG Trigger: TCCATGTTGCCAAGAGCATCAACATCTAAAGAAATC...CAAGGAGCTGTCATAAATCAGTCCAGCAAAGCCTGGGGGAGTTGCTGATGGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR TCA 90 bp | AACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGTCTTGCCTGCTAGCAGTGAGCTaGGGATGTACAAGGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NCGSAAALPKRISIQLSCLLAVS*GCTRTV Trigger: GACAGTCCTTGTACATCCTCAGCTCACTGCTAGCAG...GCAAGACAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR GCA 90 bp | GTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTAATGTGACTGTTTTCTaGCAAAACAGCAACTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VTQGPESLMGLGLWSGGINVTVF*QNSNLH Trigger: GTGCAAGTTGCTGTTTTGGCAGAAAACAGTCACATT...AATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | AACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGTCTTGCGCATCCTTCTGGTCATaGCTGGCTGATAACAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NCGSAAALPKRISIQLSCASFWS*LADNSP Trigger: TGGGCTGTTATCAGCCAGCCATGACCAGAAGGATGC...GCAAGACAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | AGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGATGCCTCATCATACACTaGAGAAGACCTCGCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SDNHLHLVPDGLSLRVQRCLIIH*RRPRIS Trigger: GCTGATGCGAGGTCTTCTCCAGTGTATGATGAGGCA...TCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | TCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGCTTCTCATCGCAGTCTaGATCCAGGAAGGTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SDNCGSAAALPKRISIQLLLIAV*IQEGQV Trigger: CACCTGACCTTCCTGGATCCAGACTGCGATGAGAAG...CAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | AGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGTATCCTCCCAGGTCTaGCTCACTGTCAGGACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SDNHLHLVPDGLSLRVQRVSSQV*LTVRTK Trigger: TTTAGTCCTGACAGTGAGCCAGACCTGGGAGGATAC...TCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | GGACACCAGTGGCAATCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAAGGTGGCTGATATACTaGTCAAGTTCATCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GHQWQSDNCGSAAALPKRRWLIY*SSSSWL Trigger: AAGCCAAGATGAACTTGACCAGTATATCAGCCACCT...TCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGATTGCCACTGGTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | TCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGTCCGCTCAGTTTTGGTaGCTCCAGTATGACCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SDNCGSAAALPKRISIQLSAQFW*LQYDPP Trigger: AGGTGGGTCATACTGGAGCCACCAAAACTGAGCGGA...CAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | AACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCTTGGGTTGTCGAGGATaGGAGGACGTAACCATCGAT | + |
|
Preference number: 4 (lower is better) Translates to: NEVTIICILFQMGCHSGSLGCRG*EDVTID Trigger: ATCGATGGTTACGTCCTCCCATCCTCGACAACCCAA...GGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| 3UTR CAA 72 bp | AGCTGCACTTCCAAAGAGAATAAGCATACAACTGTCTaGCCTCCAGTCAGAGGTGAGAGACCTGTGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCTSKENKHTTV*PPVRGERPVCS Trigger: GGAACACACAGGTCTCTCACCTCTGACTGGAGGCAAGACAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| 3UTR CAA 72 bp | GGGCTTAAAAGGAACGAAGTGACAATCATTTGCATCTaGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLKRNEVTIICI*FQMGCHSGSRE Trigger: CTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTTCCTTTTAAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR TCA 90 bp | AACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGTCTTGCCTGTCCTTGGTACTCTaGGTGTGCTTGAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NCGSAAALPKRISIQLSCLSLVL*VCLNFS Trigger: GGAGAAGTTCAAGCACACTCAGAGTACCAAGGACAG...GCAAGACAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR TCA 90 bp | TCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGAGGCCATGGCACTTCTaGAGGATCTTCCACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDNCGSAAALPKRISIQLRPWHF*RIFHTF Trigger: GAAAGTGTGGAAGATCCTTCAGAAGTGCCATGGCCT...CAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCATCTGATCCTTTGCATACAAAATTCTTCCATGTTTTGACACAGAAATGCCACAGGATGGTTTGCTaGACCAGCCTCGCGTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: PPSDPLHTKFFHVLTQKCHRMVC*TSLAYP Trigger: CGGGTACGCGAGGCTGGTGCAGCAAACCATCCTGTG...GCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGGATCAGATGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCATCTGATCCTTTGCATACAAAATTCTTCCATGTTTTGACACAGAAATGCTCTTGCGGTAGGCCATaGCCAGGCCCCAAACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPSDPLHTKFFHVLTQKCSCGRP*PGPKQP Trigger: TGGCTGTTTGGGGCCTGGGCATGGCCTACCGCAAGA...GCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGGATCAGATGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGGAACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCACCAAGGACACCAATGTaGCGATACGGTCGACCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KRNEVTIICILFQMGCHSPRTPM*RYGRPL Trigger: GAGTGGTCGACCGTATCGGCACATTGGTGTCCTTGG...TGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTTCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | ACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTTCGGTCTACTGTGTGTaGATTCTTATACTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TQGPESLMGLGLWSGGICSVYCV*ILILFI Trigger: GATGAAGAGTATAAGAATCCACACACAGTAGACCGA...ACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGGCAATCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCTACAGAATGTCTGCTTaGTCCTGTAGGTTTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QWQSDNCGSAAALPKRISYRMSA*SCRFEQ Trigger: CTGCTCAAACCTACAGGACCAAGCAGACATTCTGTA...GCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGATTGCCACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR TCA 90 bp | AAAAGGAACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCATCGCTGAGAAGACTGTaGACAGTGACTCCATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRNEVTIICILFQMGCHSSLRRL*TVTPCC Trigger: GCAGCATGGAGTCACTGTTCACAGTCTTCTCAGCGA...TGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTTCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR GCA 90 bp | GGGCTTAAAAGGAACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCATCACCCACCACAGTaGTACATGTGGCAGTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLKRNEVTIICILFQMGCHHPPQ*YMWQCC Trigger: ACAACACTGCCACATGTAGCACTGTGGTGGGTGATG...ACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTTCCTTTTAAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGTCTCACAGCATAGCCCCAGCTGGTCTGAAACTCATGTAGACCAGACTATCAGCAACTTTATATaGAGCTTCTATGTAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRVSQHSPSWSETHVDQTISNFI*SFYVED Trigger: GTCTTCTACATAGAAGCTGCATATAAAGTTGCTGAT...AGTCTGGTCTACATGAGTTTCAGACCAGCTGGGGCTATGCTGTGAGACCCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTGGCCCATCAATCAGCAACTTTATATaGAGCTTCTATGTAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PESLMGLGLWSGGICGPSISNFI*SFYVED Trigger: GTCTTCTACATAGAAGCTGCATATAAAGTTGCTGAT...TGATGGGCCACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | AACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGTCTTGCCCACAGTGCTACATGTaGCAGTGTTGTACTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NCGSAAALPKRISIQLSCPQCYM*QCCTWH Trigger: ATGCCAAGTACAACACTGCCACATGTAGCACTGTGG...GCAAGACAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCATCTGATCCTTTGCATACAAAATTCTTCCATGTTTTGACACAGAAATGCCCTGAGGCTGTCATCTaGGCCAGGAACAGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPSDPLHTKFFHVLTQKCPEAVI*ARNRRK Trigger: CTTCCTCCTGTTCCTGGCCCAGATGACAGCCTCAGG...GCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGGATCAGATGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR CCA 90 bp | TCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGACATCAGCAATGCTCTaGACAGTCATTCCATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SDNCGSAAALPKRISIQLTSAML*TVIPCS Trigger: GGAGCATGGAATGACTGTCCAGAGCATTGCTGATGT...CAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | CAATCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAAACTGTAAGCTGCTTCTaGTGGGACAGCAGATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSDNCGSAAALPKRISIQTVSCF*WDSRSA Trigger: TGCAGATCTGCTGTCCCACCAGAAGCAGCTTACAGT...TTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | CAATCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAATCTGTGGCCATCACCTaGATGATCAATCCAATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QSDNCGSAAALPKRISIQSVAIT*MINPIR Trigger: CCGGATTGGATTGATCATCCAGGTGATGGCCACAGA...TTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | GGGCTTAAAAGGAACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCTGTTGGACATGGTCTaGCCCAAAGGAAAGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLKRNEVTIICILFQMGCLLDMV*PKGKNC Trigger: GCAGTTCTTTCCTTTGGGCCAGACCATGTCCAACAG...ACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTTCCTTTTAAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR TCA 90 bp | AAAAGGAACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAAGTTCCGGAATGCCCTaGTTGGTTTTATCTCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: KRNEVTIICILFQMGCHSSSGMP*LVLSPR Trigger: GCGTGGAGATAAAACCAATCAGGGCATTCCGGAACT...TGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTTCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCATCTGATCCTTTGCATACAAAATTCTTCCATGTTTTGACACAGAAATGCCCAAGGACACCAATGTaGCGATACGGTCGACCACTC | + |
|
Preference number: 4 (lower is better) Translates to: PPSDPLHTKFFHVLTQKCPRTPM*RYGRPL Trigger: GAGTGGTCGACCGTATCGGCACATTGGTGTCCTTGG...GCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGGATCAGATGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR CCA 90 bp | AACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGTCTTGCTGCTGGTCAGTGAACTaGGGTGTAAAAGTGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: NCGSAAALPKRISIQLSCCWSVN*GVKVKM Trigger: CATCTTCACTTTTACACCCCAGTTCACTGACCAGCA...GCAAGACAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR TCA 90 bp | GGGCTTAAAAGGAACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCATGGAGAAAAGAATTaGCTGGCAGTGCTCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLKRNEVTIICILFQMGCHGEKN*LAVLNF Trigger: GAAGTTGAGCACTGCCAGTCAATTCTTTTCTCCATG...ACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTTCCTTTTAAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR TCA 90 bp | AACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGTCTTGCTGCAGGATGAATGTCTaGTCCATCATTTGTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NCGSAAALPKRISIQLSCCRMNV*SIICEH Trigger: ATGCTCACAAATGATGGATCAGACATTCATCCTGCA...GCAAGACAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR TCA 90 bp | CAATCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAAAAAATGGCTGTCTTCTaGCTTCTTACAAAGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSDNCGSAAALPKRISIQKMAVF*LLTKRG Trigger: CCCCCTCTTTGTAAGAAGTCAGAAGACAGCCATTTT...TTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGATTG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR GCA 90 bp | TCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGGTTCACATCTTCTACTaGAAAGGCCGGGAAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SDNCGSAAALPKRISIQLVHIFY*KGRERN Trigger: ATTTCTTTCCCGGCCTTTGCAGTAGAAGATGTGAAC...CAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGGAACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCATTCATCCACCTTGTCTaGTGGGATGGCATAGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KRNEVTIICILFQMGCHSFIHLV*WDGIEF Trigger: GAACTCTATGCCATCCCACCAGACAAGGTGGATGAA...TGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTTCCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR TCA 90 bp | AAAAGGAACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCATACTCTGAGTGTGCTTaGACTTCTCCACTTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRNEVTIICILFQMGCHSYSECA*TSPLCP Trigger: TGGACAAAGTGGAGAAGTTCAAGCACACTCAGAGTA...TGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTTCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR TCA 90 bp | CTTACCAGACAGAAAAGAGAACCTAATAAGAGGATGCTGCCTAGTTTTCTACTTAGTTCCGGAATGCCCTaGTTGGTTTTATCTCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: LTRQKREPNKRMLPSFLLSSGMP*LVLSPR Trigger: GCGTGGAGATAAAACCAATCAGGGCATTCCGGAACT...AAGTAGAAAACTAGGCAGCATCCTCTTATTAGGTTCTCTTTTCTGTCTGGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCATCTGATCCTTTGCATACAAAATTCTTCCATGTTTTGACACAGAAATGCCATCACCCACCACAGTaGTACATGTGGCAGTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPSDPLHTKFFHVLTQKCHHPPQ*YMWQCC Trigger: ACAACACTGCCACATGTAGCACTGTGGTGGGTGATG...GCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGGATCAGATGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR GCA 90 bp | CTTACCAGACAGAAAAGAGAACCTAATAAGAGGATGCTGCCTAGTTTTCTACTTTGGACTCGAATCGGATaGACATCAGCAATGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTRQKREPNKRMLPSFLLWTRIG*TSAMLW Trigger: CCAGAGCATTGCTGATGTGCATCCGATTCGAGTCCA...AAGTAGAAAACTAGGCAGCATCCTCTTATTAGGTTCTCTTTTCTGTCTGGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGGAACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAACAGTGACTCCATGCTaGCCAAACAAATTGGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: KRNEVTIICILFQMGCHSTVTPC*PNKLVS Trigger: GGATACCAATTTGTTTGGGCAGCATGGAGTCACTGT...TGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTTCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTGCATACAAAATTCTTCCATGTTTTGACACAGAAATGCTTACCAGACAGAGCATCCTTCTGGTCATaGCTGGCTGATAACAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLHTKFFHVLTQKCLPDRASFWS*LADNSP Trigger: TGGGCTGTTATCAGCCAGCCATGACCAGAAGGATGC...TCTGTCTGGTAAGCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTTAAAAGGAACGAAGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTATGCTCTTGGCAACATaGAGAAAAGAATTGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLKRNEVTIICILFQMGCMLLAT*RKELTG Trigger: GCCAGTCAATTCTTTTCTCCATGTTGCCAAGAGCAT...ACAGCCCATCTGGAACAAGATGCAAATGATTGTCACTTCGTTCCTTTTAAGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCATCTGATCCTTTGCATACAAAATTCTTCCATGTTTTGACACAGAAATGCGATCGATTTCACCCGTaGCAAGGAATCCCTCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PPSDPLHTKFFHVLTQKCDRFHP*QGIPLL Trigger: TAGCAGAGGGATTCCTTGCCACGGGTGAAATCGATC...GCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGGATCAGATGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR CCA 90 bp | TCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGATCAAACTCCATTCTTaGTTTAGGCCAGCTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SDNCGSAAALPKRISIQLIKLHS*FRPAFP Trigger: TGGAAAAGCTGGCCTAAACCAAGAATGGAGTTTGAT...CAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCATCTGATCCTTTGCATACAAAATTCTTCCATGTTTTGACACAGAAATGCCCACAGTGCTACATGTaGCAGTGTTGTACTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PPSDPLHTKFFHVLTQKCPQCYM*QCCTWH Trigger: ATGCCAAGTACAACACTGCCACATGTAGCACTGTGG...GCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGGATCAGATGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR CCA 90 bp | CTTACCAGACAGAAAAGAGAACCTAATAAGAGGATGCTGCCTAGTTTTCTACTTACATCAGCAATGCTCTaGACAGTCATTCCATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTRQKREPNKRMLPSFLLTSAML*TVIPCS Trigger: GGAGCATGGAATGACTGTCCAGAGCATTGCTGATGT...AAGTAGAAAACTAGGCAGCATCCTCTTATTAGGTTCTCTTTTCTGTCTGGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCATCTGATCCTTTGCATACAAAATTCTTCCATGTTTTGACACAGAAATGCTACTCTGAGTGTGCTTaGACTTCTCCACTTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPSDPLHTKFFHVLTQKCYSECA*TSPLCP Trigger: TGGACAAAGTGGAGAAGTTCAAGCACACTCAGAGTA...GCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGGATCAGATGGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTGCATACAAAATTCTTCCATGTTTTGACACAGAAATGCTTACCAGACAGAAGACAAGATTCTGTATaGAGGCCACTTCGTCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLHTKFFHVLTQKCLPDRRQDSV*RPLRQG Trigger: CCCTTGACGAAGTGGCCTTCATACAGAATCTTGTCT...TCTGTCTGGTAAGCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR TCA 90 bp | CTTACCAGACAGAAAAGAGAACCTAATAAGAGGATGCTGCCTAGTTTTCTACTTAGTTTGGCATATATGTaGCTAAGAATTCGGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTRQKREPNKRMLPSFLLSLAYM*LRIRPG Trigger: GCCAGGCCGAATTCTTAGTCACATATATGCCAAACT...AAGTAGAAAACTAGGCAGCATCCTCTTATTAGGTTCTCTTTTCTGTCTGGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR CCA 90 bp | CCTTTGCATACAAAATTCTTCCATGTTTTGACACAGAAATGCTTACCAGACAGAGATTTGCGTCCTCCATaGGCTCCAAAAAGATCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLHTKFFHVLTQKCLPDRDLRPP*APKRSS Trigger: ACTAGATCTTTTTGGAGCCCATGGAGGACGCAAATC...TCTGTCTGGTAAGCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR TCA 90 bp | CCTCCATCTGATCCTTTGCATACAAAATTCTTCCATGTTTTGACACAGAAATGCGATTTCTTTAGATGTTaGTGCTCTTGGCAACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPSDPLHTKFFHVLTQKCDFFRC*CSWQHG Trigger: TCCATGTTGCCAAGAGCATCAACATCTAAAGAAATC...GCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGGATCAGATGGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR GCA 90 bp | CTTACCAGACAGAAAAGAGAACCTAATAAGAGGATGCTGCCTAGTTTTCTACTTAATGTGACTGTTTTCTaGCAAAACAGCAACTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTRQKREPNKRMLPSFLLNVTVF*QNSNLH Trigger: GTGCAAGTTGCTGTTTTGGCAGAAAACAGTCACATT...AAGTAGAAAACTAGGCAGCATCCTCTTATTAGGTTCTCTTTTCTGTCTGGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTGCATACAAAATTCTTCCATGTTTTGACACAGAAATGCTTACCAGACAGAATGCTCTTGGCAACATaGAGAAAAGAATTGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLHTKFFHVLTQKCLPDRMLLAT*RKELTG Trigger: GCCAGTCAATTCTTTTCTCCATGTTGCCAAGAGCAT...TCTGTCTGGTAAGCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS-3UTR CCA 90 bp | CTTACCAGACAGAAAAGAGAACCTAATAAGAGGATGCTGCCTAGTTTTCTACTTCCTGTTCTTTTTACCTaGGGTGTAAAAGTGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LTRQKREPNKRMLPSFLLPVLFT*GVKVKM Trigger: CATCTTCACTTTTACACCCCAGGTAAAAAGAACAGG...AAGTAGAAAACTAGGCAGCATCCTCTTATTAGGTTCTCTTTTCTGTCTGGTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTGCATACAAAATTCTTCCATGTTTTGACACAGAAATGCTTACCAGACAGATCGGTCTACTGTGTGTaGATTCTTATACTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PLHTKFFHVLTQKCLPDRSVYCV*ILILFI Trigger: GATGAAGAGTATAAGAATCCACACACAGTAGACCGA...TCTGTCTGGTAAGCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| 3UTR CAA 72 bp | CCATCTGATCCTTTGCATACAAAATTCTTCCATGTTTaGACACAGAAATGCTTACCAGACAGAAAAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PSDPLHTKFFHV*TQKCLPDRKEN Trigger: GTTCTCTTTTCTGTCTGGTAAGCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGGATCAGATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS GCA 90 bp | CTGTTAATGGCCCCATCCAACCTTCTCCGGCGCAGCCACTGGCCCTaGTGTTCTCCCCAGCCCAGGTGCTGTCCTCCAGAGTCTGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLMAPSNLLRRSHWP*CSPQPRCCPPESVD Trigger: ATCTACAGACTCTGGAGGACAGCACCTGGGCTGGGGAGAACAGCAGGGCCAGTGGCTGCGCCGGAGAAGGTTGGATGGGGCCATTAACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 90 bp | TGGTGGCTCCAGTATGACCCACCTCATGGATGGAGATGGCAGGGCTaGACATGGAGGAGTGTATTGGGCGCACGCTTCTCTCCACACCGA | + |
|
Preference number: 5 (lower is better) Translates to: WWLQYDPPHGWRWQG*TWRSVLGARFSPHR Trigger: TCGGTGTGGAGAGAAGCGTGCGCCCAATACACTCCTCCATGTCCAGCCCTGCCATCTCCATCCATGAGGTGGGTCATACTGGAGCCACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 90 bp | CACTCCGCTCAGTTTTGGTGGCTCCAGTATGACCCACCTCATGGATaGAGATGGCAGGGCTGGACATGGAGGAGTGTATTGGGCGCACGC | + |
|
Preference number: 5 (lower is better) Translates to: HSAQFWWLQYDPPHG*RWQGWTWRSVLGAR Trigger: GCGTGCGCCCAATACACTCCTCCATGTCCAGCCCTGCCATCTCCATCCATGAGGTGGGTCATACTGGAGCCACCAAAACTGAGCGGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS TCA 90 bp | CTCAGTCTGGTGATGCCACTCCGCTCAGTTTTGGTGGCTCCAGTATaGCCCACCTCATGGATGGAGATGGCAGGGCTGGACATGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSLVMPLRSVLVAPV*PTSWMEMAGLDMEE Trigger: CTCCTCCATGTCCAGCCCTGCCATCTCCATCCATGAGGTGGGTCATACTGGAGCCACCAAAACTGAGCGGAGTGGCATCACCAGACTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 90 bp | CACCTCATGGATGGAGATGGCAGGGCTGGACATGGAGGAGTGTATTaGGCGCACGCTTCTCTCCACACCGAACTCCTTCCCACTCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HLMDGDGRAGHGGVY*AHASLHTELLPTQD Trigger: ATCCTGAGTGGGAAGGAGTTCGGTGTGGAGAGAAGCGTGCGCCCAATACACTCCTCCATGTCCAGCCCTGCCATCTCCATCCATGAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 90 bp | CTCCAGTATGACCCACCTCATGGATGGAGATGGCAGGGCTGGACATaGAGGAGTGTATTGGGCGCACGCTTCTCTCCACACCGAACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LQYDPPHGWRWQGWT*RSVLGARFSPHRTP Trigger: AGGAGTTCGGTGTGGAGAGAAGCGTGCGCCCAATACACTCCTCCATGTCCAGCCCTGCCATCTCCATCCATGAGGTGGGTCATACTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS-3UTR CAA 90 bp | ATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGACGTGGATCACCGATTaGCGTCCTCCATGGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ILFQMGCHSGSREPNGAGTWITD*RPPWAP Trigger: TGGAGCCCATGGAGGACGCAAATCGGTGATCCACGT...CCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS TCA 90 bp | ATGGCCAAGTTGTCCAGATCAGACACCTGGTCCTGCAGGAACAGCTaGTTGGCCAGCTGCACTATCTGGTCCACATGGATGATGCCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: MAKLSRSDTWSCRNS*LASCTIWSTWMMPP Trigger: CGGGGGCATCATCCATGTGGACCAGATAGTGCAGCTGGCCAATCAGCTGTTCCTGCAGGACCAGGTGTCTGATCTGGACAACTTGGCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS CCA 90 bp | GCTCAGTTTTGGTGGCTCCAGTATGACCCACCTCATGGATGGAGATaGCAGGGCTGGACATGGAGGAGTGTATTGGGCGCACGCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AQFWWLQYDPPHGWR*QGWTWRSVLGARFS Trigger: AGAGAAGCGTGCGCCCAATACACTCCTCCATGTCCAGCCCTGCCATCTCCATCCATGAGGTGGGTCATACTGGAGCCACCAAAACTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS TCA 90 bp | AGGATGTCTGTGGTTCCAAATGACACCTGGTCCTGCAGGAACAGCTaGTTGGCCAGCTGCACTATCTGGTCCACATGGATGATGCCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RMSVVPNDTWSCRNS*LASCTIWSTWMMPP Trigger: CGGGGGCATCATCCATGTGGACCAGATAGTGCAGCTGGCCAATCAGCTGTTCCTGCAGGACCAGGTGTCATTTGGAACCACAGACATCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 |
||
| CDS GCA 90 bp | GGCCATCACCTGGATGATCAATCCAATCCGGAGTCTGAGCATCTCTaGAAAGAGGCTAGGCTGGGCCCGGACATACATGGCCAGGTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GHHLDDQSNPESEHL*KEARLGPDIHGQVN Trigger: GTTTACCTGGCCATGTATGTCCGGGCCCAGCCTAGCCTCTTTGCAGAGATGCTCAGACTCCGGATTGGATTGATCATCCAGGTGATGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS-3UTR CAA 90 bp | GTAGACCAGACTGGCCTTGAACTCATAGAGTCTCGCCAGTCTTTGCCTCCCCAGGTAACACAGGATGGTTaGCTGCACCAGCCTCGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: VDQTGLELIESRQSLPPQVTQDG*LHQPRV Trigger: TACGCGAGGCTGGTGCAGCAAACCATCCTGTGTTAC...CTGGGGAGGCAAAGACTGGCGAGACTCTATGAGTTCAAGGCCAGTCTGGTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
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| CDS TCA 90 bp | GGGCGCACGCTTCTCTCCACACCGAACTCCTTCCCACTCAGGATATaGTGCAGAAGGCTCTTCATGTCGAAAGGGCTGAGGTTCATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GRTLLSTPNSFPLRI*CRRLFMSKGLRFIK Trigger: CTTGATGAACCTCAGCCCTTTCGACATGAAGAGCCTTCTGCATCATATCCTGAGTGGGAAGGAGTTCGGTGTGGAGAGAAGCGTGCGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS GCA 90 bp | CAGCATTCTTGCGGTAGGCCATGCCCAGGCCCCAAACAGCCAATATaGTATAGATATTGTCCCGTACCCAGGCATCCTTCTGGTCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: QHSCGRPCPGPKQPI*YRYCPVPRHPSGHG Trigger: GCCATGACCAGAAGGATGCCTGGGTACGGGACAATATCTATAGCATATTGGCTGTTTGGGGCCTGGGCATGGCCTACCGCAAGAATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 ENSMUST00000139587.8 |
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| CDS GCA 90 bp | GTGCTGCCTTGGCCACTCCCACCGAGCTTGCATTCAGTTCCGGAATaGCCTGATTGGTTTTATCTCCACGCTCCCACATCCCATAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLPWPLPPSLHSVPE*PDWFYLHAPTSHNQ Trigger: CTGATTATGGGATGTGGGAGCGTGGAGATAAAACCAATCAGGGCATTCCGGAACTGAATGCAAGCTCGGTGGGAGTGGCCAAGGCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS GCA 90 bp | CCTGTCGGGGAGGATGGGGTGCTGGACCTCACAGACTTGATGGAATaGAAACTGTTGGACATGGTCTGGCCCAAAGGAAAGAACTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PVGEDGVLDLTDLME*KLLDMVWPKGKNCS Trigger: TGAGCAGTTCTTTCCTTTGGGCCAGACCATGTCCAACAGTTTGCATTCCATCAAGTCTGTGAGGTCCAGCACCCCATCCTCCCCGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 90 bp | TTTCCTGAGCAGTTCAGGCTCCGAGCCAGCTCTGTGGCCATCACCTaGATGATCAATCCAATCCGGAGTCTGAGCATCTCTGCAAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FPEQFRLRASSVAIT*MINPIRSLSISAKR Trigger: CCTCTTTGCAGAGATGCTCAGACTCCGGATTGGATTGATCATCCAGGTGATGGCCACAGAGCTGGCTCGGAGCCTGAACTGCTCAGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 90 bp | TGCCGATACTCAGGCTGGGACACACGGTTGAGCACTGACTCCACATaGACGGCAAACTTGATCTCACAAGGGGTCATCTCTTGGGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CRYSGWDTRLSTDST*TANLISQGVISWVV Trigger: GACAACCCAAGAGATGACCCCTTGTGAGATCAAGTTTGCCGTCCATGTGGAGTCAGTGCTCAACCGTGTGTCCCAGCCTGAGTATCGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS TCA 90 bp | GCAGGAACAGCTGATTGGCCAGCTGCACTATCTGGTCCACATGGATaGTGCCCCCGATACTGTCCATTTCGGTATCTGAGAGCAGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGTADWPAALSGPHG*CPRYCPFRYLRAES Trigger: TGACTCTGCTCTCAGATACCGAAATGGACAGTATCGGGGGCATCATCCATGTGGACCAGATAGTGCAGCTGGCCAATCAGCTGTTCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS GCA 90 bp | TTCATCAATGGCCTCAAGTGCTGCCTTGGCCACTCCCACCGAGCTTaGATTCAGTTCCGGAATGCCCTGATTGGTTTTATCTCCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FINGLKCCLGHSHRA*IQFRNALIGFISTL Trigger: GAGCGTGGAGATAAAACCAATCAGGGCATTCCGGAACTGAATGCAAGCTCGGTGGGAGTGGCCAAGGCAGCACTTGAGGCCATTGATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS GCA 90 bp | GTATCTGAGAGCAGAGTCAGTACCATGATGGCTTCTACCAGTAGCTaGCGATACTCAGGCTGGGACACACGGTTGAGCACTGACTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: VSESRVSTMMASTSS*RYSGWDTRLSTDST Trigger: TGTGGAGTCAGTGCTCAACCGTGTGTCCCAGCCTGAGTATCGGCAGCTACTGGTAGAAGCCATCATGGTACTGACTCTGCTCTCAGATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 90 bp | TCTGCTAGCAGTGAGCTGAGGATGTACAAGGACTGTCCCCAAAGATaGGGCAGCTTTCCCAGTGGAACTCGGTCTACTGTGTGTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: SASSELRMYKDCPQR*GSFPSGTRSTVCGF Trigger: GAATCCACACACAGTAGACCGAGTTCCACTGGGAAAGCTGCCCCATCTTTGGGGACAGTCCTTGTACATCCTCAGCTCACTGCTAGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 90 bp | GGCAAACTTGATCTCACAAGGGGTCATCTCTTGGGTTGTCGAGGATaGGAGGACGTAACCATCGATGGACAGGCCATGGCACTTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GKLDLTRGHLLGCRG*EDVTIDGQAMALLK Trigger: CTTCAGAAGTGCCATGGCCTGTCCATCGATGGTTACGTCCTCCCATCCTCGACAACCCAAGAGATGACCCCTTGTGAGATCAAGTTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS-3UTR CAA 90 bp | CCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTGTGGCCCATCACTTGGTCCTGTAGGTTaGAGCAGTCTTTCAGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PESLMGLGLWSGGICGPSLGPVG*SSLSVA Trigger: GGCAACTGAAAGACTGCTCAAACCTACAGGACCAAG...TGATGGGCCACAAATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CAA 90 bp | CAGTGGCAATCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCGTAACACAGGATGGTTaGCTGCACCAGCCTCGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: QWQSDNCGSAAALPKRISVTQDG*LHQPRV Trigger: TACGCGAGGCTGGTGCAGCAAACCATCCTGTGTTAC...GCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGATTGCCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CAA 90 bp | GTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTTGTGGTCAGGAGGAATTTTCATCTTGGCTTTCTaGAGGACTGCTGTCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VTQGPESLMGLGLWSGGIFILAF*RTAVFQ Trigger: CTGGAAGACAGCAGTCCTCAAGAAAGCCAAGATGAA...AATTCCTCCTGACCACAAACCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CAA 90 bp | GGCCCATCAGCAACTCCCCCAGGCTTTGCTGGACTGATTTATGACAGCTCCTTGCTGGTCAAGTTCATCTaGGCTTTCTTGAGGACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPSATPPGFAGLIYDSSLLVKFI*AFLRTA Trigger: AGCAGTCCTCAAGAAAGCCAAGATGAACTTGACCAG...CAAGGAGCTGTCATAAATCAGTCCAGCAAAGCCTGGGGGAGTTGCTGATGGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS-3UTR CAA 90 bp | AGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGATGCTGCCCAAACAAATaGGTATCCCAGCGGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: SDNHLHLVPDGLSLRVQRCCPNK*VSQRGP Trigger: GGGTCCCCGCTGGGATACCAATTTGTTTGGGCAGCA...TCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CAA 90 bp | TTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGCCTAATGGGGACTTTGATGGCCAAGTaGTCCAGATCAGACACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FASCSRWAVTQGPESLMGTLMAK*SRSDTW Trigger: CCAGGTGTCTGATCTGGACAACTTGGCCATCAAAGT...CCCCATTAGGCTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CAA 90 bp | TCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGAGCCTAATGGGGCTGGGTTGCCAAAACAGCAACTaGCACTACAACATCAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SCSRWAVTQGPESLMGLGCQNSN*HYNIRF Trigger: AAACCTGATGTTGTAGTGCAAGTTGCTGTTTTGGCA...ACCCAGCCCCATTAGGCTCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CAA 90 bp | TCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGGGGTCATCTCTTGGGTaGTCGAGGATGGGAGGACGT | + |
|
Preference number: 5 (lower is better) Translates to: SDNCGSAAALPKRISIQLGSSLG*SRMGGR Trigger: ACGTCCTCCCATCCTCGACAACCCAAGAGATGACCC...CAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS TCA 90 bp | ACAGCAGATCTGCACAGGCCTCAGCCAGGACCTCCACTTTCTTCCTaGGCAGGCCTGAAATGTAGCGAATCAAACTCCATTCTTGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: TADLHRPQPGPPLSS*AGLKCSESNSILGL Trigger: TAAACCAAGAATGGAGTTTGATTCGCTACATTTCAGGCCTGCTCAGGAAGAAAGTGGAGGTCCTGGCTGAGGCCTGTGCAGATCTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CCA 90 bp | TGGCCACTCCCACCGAGCTTGCATTCAGTTCCGGAATGCCCTGATTaGTTTTATCTCCACGCTCCCACATCCCATAATCAGCAACTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: WPLPPSLHSVPECPD*FYLHAPTSHNQQLY Trigger: ATAAAGTTGCTGATTATGGGATGTGGGAGCGTGGAGATAAAACCAATCAGGGCATTCCGGAACTGAATGCAAGCTCGGTGGGAGTGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CCA 90 bp | TCAACTTCATCAGGTAGGACGTGGATCACCGATTTGCGTCCTCCATaGGCTCCAAAAAGATCTAGTTCATCAATGGCCTCAAGTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: STSSGRTWITDLRPP*APKRSSSSMASSAA Trigger: GGCAGCACTTGAGGCCATTGATGAACTAGATCTTTTTGGAGCCCATGGAGGACGCAAATCGGTGATCCACGTCCTACCTGATGAAGTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CCA 90 bp | CCAAAGATGGGGCAGCTTTCCCAGTGGAACTCGGTCTACTGTGTGTaGATTCTTATACTCTTCATCCACCTTGTCTGGTGGGATGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: PKMGQLSQWNSVYCV*ILILFIHLVWWDGI Trigger: TATGCCATCCCACCAGACAAGGTGGATGAAGAGTATAAGAATCCACACACAGTAGACCGAGTTCCACTGGGAAAGCTGCCCCATCTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CCA 90 bp | GAGGATGTACAAGGACTGTCCCCAAAGATGGGGCAGCTTTCCCAGTaGAACTCGGTCTACTGTGTGTGGATTCTTATACTCTTCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: EDVQGLSPKMGQLSQ*NSVYCVWILILFIH Trigger: GTGGATGAAGAGTATAAGAATCCACACACAGTAGACCGAGTTCCACTGGGAAAGCTGCCCCATCTTTGGGGACAGTCCTTGTACATCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CCA 90 bp | TTGGCTTTCTTGAGGACTGCTGTCTTCCAGGTATCCTCCCAGGTCTaGCTCACTGTCAGGACTAAAGCTCCTATCAGTGATGTCACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LAFLRTAVFQVSSQV*LTVRTKAPISDVTK Trigger: TTTGGTGACATCACTGATAGGAGCTTTAGTCCTGACAGTGAGCCAGACCTGGGAGGATACCTGGAAGACAGCAGTCCTCAAGAAAGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CCA 90 bp | CTGGACCTCACAGACTTGATGGAATGCAAACTGTTGGACATGGTCTaGCCCAAAGGAAAGAACTGCTCATCAGCACTAGCTCGCCTATTC | + |
|
Preference number: 5 (lower is better) Translates to: LDLTDLMECKLLDMV*PKGKNCSSALARLF Trigger: GAATAGGCGAGCTAGTGCTGATGAGCAGTTCTTTCCTTTGGGCCAGACCATGTCCAACAGTTTGCATTCCATCAAGTCTGTGAGGTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGTCTCACAGCATAGCCCCAGCTGGTCTGAAACTCATGTAGACCAGACTACATGGAGAAAAGAATaGACTGGCAGTGCTCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: GRVSQHSPSWSETHVDQTTWRKE*TGSAQL Trigger: AAGTTGAGCACTGCCAGTCAATTCTTTTCTCCATGT...AGTCTGGTCTACATGAGTTTCAGACCAGCTGGGGCTATGCTGTGAGACCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR CAA 90 bp | GTAGACCAGACTGGCCTTGAACTCATAGAGTCTCGCCAGTCTTTGCCTCCCCAGTGCCAAAACAGCAACTaGCACTACAACATCAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VDQTGLELIESRQSLPPQCQNSN*HYNIRF Trigger: AAACCTGATGTTGTAGTGCAAGTTGCTGTTTTGGCA...CTGGGGAGGCAAAGACTGGCGAGACTCTATGAGTTCAAGGCCAGTCTGGTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR CAA 90 bp | AACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGTCTTGCACAAGGGGTCATCTCTaGGGTTGTCGAGGATGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NCGSAAALPKRISIQLSCTRGHL*GCRGWE Trigger: CTCCCATCCTCGACAACCCAAGAGATGACCCCTTGT...GCAAGACAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS TCA 90 bp | TCCCACTCAGGATATGATGCAGAAGGCTCTTCATGTCGAAAGGGCTaGGGTTCATCAAGCTCTCCGAAGCTTCTTTTCCTGAGCAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SHSGYDAEGSSCRKG*GSSSSPKLLFLSSS Trigger: TGAACTGCTCAGGAAAAGAAGCTTCGGAGAGCTTGATGAACCTCAGCCCTTTCGACATGAAGAGCCTTCTGCATCATATCCTGAGTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CCA 90 bp | GTCTACTGTGTGTGGATTCTTATACTCTTCATCCACCTTGTCTGGTaGGATGGCATAGAGTTCTGGCACCAAGTGGATCCCATCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VYCVWILILFIHLVW*DGIEFWHQVDPIFA Trigger: GGCAAAGATGGGATCCACTTGGTGCCAGAACTCTATGCCATCCCACCAGACAAGGTGGATGAAGAGTATAAGAATCCACACACAGTAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS-3UTR CAA 90 bp | CAGTGGCAATCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCTCCAAACCCTTCGCTTaGGCCATCACAGAAAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: QWQSDNCGSAAALPKRISSKPFA*AITESM Trigger: CATACTTTCTGTGATGGCCAAAGCGAAGGGTTTGGA...GCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGATTGCCACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CAA 90 bp | CAATCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAAACATGGAGGAGTGTATaGGGCGCACGCTTCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QSDNCGSAAALPKRISIQTWRSV*GARFSP Trigger: TGGAGAGAAGCGTGCGCCCAATACACTCCTCCATGT...TTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS TCA 90 bp | GGATGGCATAGAGTTCTGGCACCAAGTGGATCCCATCTTTGCCTCTaGTTAATATTCCCTCCAAGGCTTCTCGGTATTCTTGGACCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GWHRVLAPSGSHLCL*LIFPPRLLGILGPE Trigger: TTCAGGTCCAAGAATACCGAGAAGCCTTGGAGGGAATATTAATCAGAGGCAAAGATGGGATCCACTTGGTGCCAGAACTCTATGCCATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS TCA 90 bp | GAGGGGGCAGGTAACACTTCAAGGATGTGCTTTGAAGAAGGTGGCTaGTATACTGGTCAAGTTCATCTTGGCTTTCTTGAGGACTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EGAGNTSRMCFEEGG*YTGQVHLGFLEDCC Trigger: ACAGCAGTCCTCAAGAAAGCCAAGATGAACTTGACCAGTATATCAGCCACCTTCTTCAAAGCACATCCTTGAAGTGTTACCTGCCCCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS GCA 90 bp | TACAGAATGTCTGCTTGGTCCTGTAGGTTTGAGCAGTCTTTCAGTTaGCCAACTAGCTTCTCACAGTCCACTTCATCATGGTCGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YRMSAWSCRFEQSFS*PTSFSQSTSSWSSL Trigger: CAGAGACGACCATGATGAAGTGGACTGTGAGAAGCTAGTTGGGCAACTGAAAGACTGCTCAAACCTACAGGACCAAGCAGACATTCTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS-3UTR CAA 90 bp | CAGTGGCAATCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCTTGAACTTCTCCACTTaGTCCACCTGCCTCATCATA | + |
|
Preference number: 5 (lower is better) Translates to: QWQSDNCGSAAALPKRISLNFST*STCLII Trigger: TATGATGAGGCAGGTGGACAAAGTGGAGAAGTTCAA...GCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGATTGCCACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CAA 90 bp | CAATCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAAGGCTTCTCGGTATTCTaGGACCTGAACAGCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: QSDNCGSAAALPKRISIQGFSVF*DLNSIT Trigger: GGTGATGCTGTTCAGGTCCAAGAATACCGAGAAGCC...TTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS CCA 90 bp | CTTATTTCGTCCAAGTTTGGCATATATGTGACTAAGAATTCGGCCTaGCTGGACTCGAATCGGATGCACATCAGCAATGCTCTGGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LISSKFGIYVTKNSA*LDSNRMHISNALDS Trigger: ACTGTCCAGAGCATTGCTGATGTGCATCCGATTCGAGTCCAGCCAGGCCGAATTCTTAGTCACATATATGCCAAACTTGGACGAAATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS-3UTR CAA 90 bp | CTTACCAGACAGAAAAGAGAACCTAATAAGAGGATGCTGCCTAGTTTTCTACTTACGTGGATCACCGATTaGCGTCCTCCATGGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LTRQKREPNKRMLPSFLLTWITD*RPPWAP Trigger: TGGAGCCCATGGAGGACGCAAATCGGTGATCCACGT...AAGTAGAAAACTAGGCAGCATCCTCTTATTAGGTTCTCTTTTCTGTCTGGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR CAA 90 bp | AGTGACAATCATTTGCATCTTGTTCCAGATGGGCTGTCACTCAGGGTCCAGAGACTTCAAGGATGTGCTTaGAAGAAGGTGGCTGATATA | + |
|
Preference number: 5 (lower is better) Translates to: SDNHLHLVPDGLSLRVQRLQGCA*KKVADI Trigger: TATATCAGCCACCTTCTTCAAAGCACATCCTTGAAG...TCTCTGGACCCTGAGTGACAGCCCATCTGGAACAAGATGCAAATGATTGTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS CCA 90 bp | TCTTTAGATGTTGATGCTCTTGGCAACATGGAGAAAAGAATTGACTaGCAGTGCTCAACTTCATCAGGTAGGACGTGGATCACCGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLDVDALGNMEKRID*QCSTSSGRTWITDL Trigger: CAAATCGGTGATCCACGTCCTACCTGATGAAGTTGAGCACTGCCAGTCAATTCTTTTCTCCATGTTGCCAAGAGCATCAACATCTAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS-3UTR CAA 90 bp | TCTGACAACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGACATGGAGAAAAGAATaGACTGGCAGTGCTCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: SDNCGSAAALPKRISIQLTWRKE*TGSAQL Trigger: AAGTTGAGCACTGCCAGTCAATTCTTTTCTCCATGT...CAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTTGTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CAA 90 bp | CCTCCATCTGATCCTTTGCATACAAAATTCTTCCATGTTTTGACACAGAAATGCGGCTTCTCGGTATTCTaGGACCTGAACAGCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: PPSDPLHTKFFHVLTQKCGFSVF*DLNSIT Trigger: GGTGATGCTGTTCAGGTCCAAGAATACCGAGAAGCC...GCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGGATCAGATGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR CAA 90 bp | AACTGTGGCTCAGCAGCTGCACTTCCAAAGAGAATAAGCATACAACTGTCTTGCAAGTGGATCCCATCTTaGCCTCTGATTAATATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NCGSAAALPKRISIQLSCKWIPS*PLINIP Trigger: GGGAATATTAATCAGAGGCAAAGATGGGATCCACTT...GCAAGACAGTTGTATGCTTATTCTCTTTGGAAGTGCAGCTGCTGAGCCACAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
||
| CDS-3UTR CAA 90 bp | CTTACCAGACAGAAAAGAGAACCTAATAAGAGGATGCTGCCTAGTTTTCTACTTCTACATGTGGCAGTGTaGTACTTGGCATGTAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: LTRQKREPNKRMLPSFLLLHVAV*YLACRL Trigger: CAGTCTACATGCCAAGTACAACACTGCCACATGTAG...AAGTAGAAAACTAGGCAGCATCCTCTTATTAGGTTCTCTTTTCTGTCTGGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR CAA 90 bp | CCTCCATCTGATCCTTTGCATACAAAATTCTTCCATGTTTTGACACAGAAATGCTTGAACTTCTCCACTTaGTCCACCTGCCTCATCATA | + |
|
Preference number: 5 (lower is better) Translates to: PPSDPLHTKFFHVLTQKCLNFST*STCLII Trigger: TATGATGAGGCAGGTGGACAAAGTGGAGAAGTTCAA...GCATTTCTGTGTCAAAACATGGAAGAATTTTGTATGCAAAGGATCAGATGGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS-3UTR CAA 90 bp | CTTACCAGACAGAAAAGAGAACCTAATAAGAGGATGCTGCCTAGTTTTCTACTTAAGTGGATCCCATCTTaGCCTCTGATTAATATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LTRQKREPNKRMLPSFLLKWIPS*PLINIP Trigger: GGGAATATTAATCAGAGGCAAAGATGGGATCCACTT...AAGTAGAAAACTAGGCAGCATCCTCTTATTAGGTTCTCTTTTCTGTCTGGTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112376.2 |
||
| CDS GCA 90 bp | AATAATTTCATTTTTGGTCACATTCACAAGGTTCACATCTTCTACTaGAAAGGCCGGGAAAGAAATAATAGAAAGAAGTCCAGCATCGAT | + |
|
Preference number: 5 (lower is better) Translates to: NNFIFGHIHKVHIFY*KGRERNNRKKSSID Trigger: ATCGATGCTGGACTTCTTTCTATTATTTCTTTCCCGGCCTTTGCAGTAGAAGATGTGAACCTTGTGAATGTGACCAAAAATGAAATTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS GCA 72 bp | GCCCCATCCAACCTTCTCCGGCGCAGCCACTGGCCCTaGTGTTCTCCCCAGCCCAGGTGCTGTCCTCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: APSNLLRRSHWP*CSPQPRCCPPE Trigger: CTCTGGAGGACAGCACCTGGGCTGGGGAGAACAGCAGGGCCAGTGGCTGCGCCGGAGAAGGTTGGATGGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CCA 72 bp | CGGGGCTCAGGGGGCAGTCCTACTGTAAGCTGCTTCTaGTGGGACAGCAGATCTGCACAGGCCTCAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RGSGGSPTVSCF*WDSRSAQASAR Trigger: CCTGGCTGAGGCCTGTGCAGATCTGCTGTCCCACCAGAAGCAGCTTACAGTAGGACTGCCCCCTGAGCCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CCA 72 bp | GATGGAGATGGCAGGGCTGGACATGGAGGAGTGTATTaGGCGCACGCTTCTCTCCACACCGAACTCCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: DGDGRAGHGGVY*AHASLHTELLP Trigger: GGGAAGGAGTTCGGTGTGGAGAGAAGCGTGCGCCCAATACACTCCTCCATGTCCAGCCCTGCCATCTCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CAA 72 bp | GGATGGAGATGGCAGGGCTGGACATGGAGGAGTGTATaGGGCGCACGCTTCTCTCCACACCGAACTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GWRWQGWTWRSV*GARFSPHRTPS Trigger: GGAAGGAGTTCGGTGTGGAGAGAAGCGTGCGCCCAATACACTCCTCCATGTCCAGCCCTGCCATCTCCATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CAA 90 bp | CCACCTCATGGATGGAGATGGCAGGGCTGGACATGGAGGAGTGTATaGGGCGCACGCTTCTCTCCACACCGAACTCCTTCCCACTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PPHGWRWQGWTWRSV*GARFSPHRTPSHSG Trigger: TCCTGAGTGGGAAGGAGTTCGGTGTGGAGAGAAGCGTGCGCCCAATACACTCCTCCATGTCCAGCCCTGCCATCTCCATCCATGAGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS TCA 72 bp | GTGATGCCACTCCGCTCAGTTTTGGTGGCTCCAGTATaGCCCACCTCATGGATGGAGATGGCAGGGCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VMPLRSVLVAPV*PTSWMEMAGLD Trigger: GTCCAGCCCTGCCATCTCCATCCATGAGGTGGGTCATACTGGAGCCACCAAAACTGAGCGGAGTGGCATCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CCA 72 bp | TGGTGGCTCCAGTATGACCCACCTCATGGATGGAGATaGCAGGGCTGGACATGGAGGAGTGTATTGGGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: WWLQYDPPHGWR*QGWTWRSVLGA Trigger: TGCGCCCAATACACTCCTCCATGTCCAGCCCTGCCATCTCCATCCATGAGGTGGGTCATACTGGAGCCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CAA 72 bp | CCTGTCGGGGAGGATGGGGTGCTGGACCTCACAGACTaGATGGAATGCAAACTGTTGGACATGGTCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PVGEDGVLDLTD*MECKLLDMVWP Trigger: GGGCCAGACCATGTCCAACAGTTTGCATTCCATCAAGTCTGTGAGGTCCAGCACCCCATCCTCCCCGACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CAA 90 bp | GGCTGGGACACACGGTTGAGCACTGACTCCACATGGACGGCAAACTaGATCTCACAAGGGGTCATCTCTTGGGTTGTCGAGGATGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GWDTRLSTDSTWTAN*ISQGVISWVVEDGR Trigger: CCTCCCATCCTCGACAACCCAAGAGATGACCCCTTGTGAGATCAAGTTTGCCGTCCATGTGGAGTCAGTGCTCAACCGTGTGTCCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS TCA 72 bp | CACCCGTGGCAAGGAATCCCTCTGCTAGCAGTGAGCTaGGGATGTACAAGGACTGTCCCCAAAGATGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: HPWQGIPLLAVS*GCTRTVPKDGA Trigger: TGCCCCATCTTTGGGGACAGTCCTTGTACATCCTCAGCTCACTGCTAGCAGAGGGATTCCTTGCCACGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CCA 72 bp | CAGTATGACCCACCTCATGGATGGAGATGGCAGGGCTaGACATGGAGGAGTGTATTGGGCGCACGCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QYDPPHGWRWQG*TWRSVLGARFS Trigger: AGAGAAGCGTGCGCCCAATACACTCCTCCATGTCCAGCCCTGCCATCTCCATCCATGAGGTGGGTCATACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS TCA 72 bp | CTGCCGATACTCAGGCTGGGACACACGGTTGAGCACTaGCTCCACATGGACGGCAAACTTGATCTCACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LPILRLGHTVEH*LHMDGKLDLTR Trigger: CCTTGTGAGATCAAGTTTGCCGTCCATGTGGAGTCAGTGCTCAACCGTGTGTCCCAGCCTGAGTATCGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS GCA 72 bp | GGCCTCAAGTGCTGCCTTGGCCACTCCCACCGAGCTTaGATTCAGTTCCGGAATGCCCTGATTGGTTTTATC | + |
|
Preference number: 6 (lower is better) Translates to: GLKCCLGHSHRA*IQFRNALIGFI Trigger: GATAAAACCAATCAGGGCATTCCGGAACTGAATGCAAGCTCGGTGGGAGTGGCCAAGGCAGCACTTGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS GCA 72 bp | CTGGATGATCAATCCAATCCGGAGTCTGAGCATCTCTaGAAAGAGGCTAGGCTGGGCCCGGACATACATGGC | + |
|
Preference number: 6 (lower is better) Translates to: LDDQSNPESEHL*KEARLGPDIHG Trigger: GCCATGTATGTCCGGGCCCAGCCTAGCCTCTTTGCAGAGATGCTCAGACTCCGGATTGGATTGATCATCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CCA 72 bp | GTCCTCCATGGGCTCCAAAAAGATCTAGTTCATCAATaGCCTCAAGTGCTGCCTTGGCCACTCCCACCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VLHGLQKDLVHQ*PQVLPWPLPPS Trigger: GCTCGGTGGGAGTGGCCAAGGCAGCACTTGAGGCCATTGATGAACTAGATCTTTTTGGAGCCCATGGAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CCA 72 bp | CAGTTCAGGCTCCGAGCCAGCTCTGTGGCCATCACCTaGATGATCAATCCAATCCGGAGTCTGAGCATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QFRLRASSVAIT*MINPIRSLSIS Trigger: AGAGATGCTCAGACTCCGGATTGGATTGATCATCCAGGTGATGGCCACAGAGCTGGCTCGGAGCCTGAACTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
||
| CDS CCA 72 bp | GATCTCACAAGGGGTCATCTCTTGGGTTGTCGAGGATaGGAGGACGTAACCATCGATGGACAGGCCATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: DLTRGHLLGCRG*EDVTIDGQAMA Trigger: TGCCATGGCCTGTCCATCGATGGTTACGTCCTCCCATCCTCGACAACCCAAGAGATGACCCCTTGTGAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS TCA 72 bp | GTGGTTCCAAATGACACCTGGTCCTGCAGGAACAGCTaGTTGGCCAGCTGCACTATCTGGTCCACATGGATG | + |
|
Preference number: 6 (lower is better) Translates to: VVPNDTWSCRNS*LASCTIWSTWM Trigger: CATCCATGTGGACCAGATAGTGCAGCTGGCCAATCAGCTGTTCCTGCAGGACCAGGTGTCATTTGGAACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 |
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| CDS TCA 72 bp | TTGTCCAGATCAGACACCTGGTCCTGCAGGAACAGCTaGTTGGCCAGCTGCACTATCTGGTCCACATGGATG | + |
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Preference number: 6 (lower is better) Translates to: LSRSDTWSCRNS*LASCTIWSTWM Trigger: CATCCATGTGGACCAGATAGTGCAGCTGGCCAATCAGCTGTTCCTGCAGGACCAGGTGTCTGATCTGGACAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112380.9 |
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| CDS GCA 72 bp | TGCGGTAGGCCATGCCCAGGCCCCAAACAGCCAATATaGTATAGATATTGTCCCGTACCCAGGCATCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: CGRPCPGPKQPI*YRYCPVPRHPS Trigger: AGAAGGATGCCTGGGTACGGGACAATATCTATAGCATATTGGCTGTTTGGGGCCTGGGCATGGCCTACCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 ENSMUST00000139587.8 |
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| CDS GCA 72 bp | AGCAGAGTCAGTACCATGATGGCTTCTACCAGTAGCTaGCGATACTCAGGCTGGGACACACGGTTGAGCACT | + |
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Preference number: 6 (lower is better) Translates to: SRVSTMMASTSS*RYSGWDTRLST Trigger: AGTGCTCAACCGTGTGTCCCAGCCTGAGTATCGGCAGCTACTGGTAGAAGCCATCATGGTACTGACTCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 72 bp | AGTGAGCTGAGGATGTACAAGGACTGTCCCCAAAGATaGGGCAGCTTTCCCAGTGGAACTCGGTCTACTGTG | + |
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Preference number: 6 (lower is better) Translates to: SELRMYKDCPQR*GSFPSGTRSTV Trigger: CACAGTAGACCGAGTTCCACTGGGAAAGCTGCCCCATCTTTGGGGACAGTCCTTGTACATCCTCAGCTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 72 bp | CTTGGGTTGTCGAGGATGGGAGGACGTAACCATCGATaGACAGGCCATGGCACTTCTGAAGGATCTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: LGLSRMGGRNHR*TGHGTSEGSST Trigger: TGTGGAAGATCCTTCAGAAGTGCCATGGCCTGTCCATCGATGGTTACGTCCTCCCATCCTCGACAACCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CAA 72 bp | TGGCCTCAAGTGCTGCCTTGGCCACTCCCACCGAGCTaGCATTCAGTTCCGGAATGCCCTGATTGGTTTTAT | + |
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Preference number: 6 (lower is better) Translates to: WPQVLPWPLPPS*HSVPECPDWFY Trigger: ATAAAACCAATCAGGGCATTCCGGAACTGAATGCAAGCTCGGTGGGAGTGGCCAAGGCAGCACTTGAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CAA 90 bp | GTTCATCAATGGCCTCAAGTGCTGCCTTGGCCACTCCCACCGAGCTaGCATTCAGTTCCGGAATGCCCTGATTGGTTTTATCTCCACGCT | + |
|
Preference number: 6 (lower is better) Translates to: VHQWPQVLPWPLPPS*HSVPECPDWFYLHA Trigger: AGCGTGGAGATAAAACCAATCAGGGCATTCCGGAACTGAATGCAAGCTCGGTGGGAGTGGCCAAGGCAGCACTTGAGGCCATTGATGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS TCA 72 bp | GCTGATTGGCCAGCTGCACTATCTGGTCCACATGGATaGTGCCCCCGATACTGTCCATTTCGGTATCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ADWPAALSGPHG*CPRYCPFRYLR Trigger: TCTCAGATACCGAAATGGACAGTATCGGGGGCATCATCCATGTGGACCAGATAGTGCAGCTGGCCAATCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS GCA 72 bp | GAGGATGGGGTGCTGGACCTCACAGACTTGATGGAATaGAAACTGTTGGACATGGTCTGGCCCAAAGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: EDGVLDLTDLME*KLLDMVWPKGK Trigger: CTTTCCTTTGGGCCAGACCATGTCCAACAGTTTGCATTCCATCAAGTCTGTGAGGTCCAGCACCCCATCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CAA 72 bp | CGGCAGGGTCATAATGCAATCGGTGTGGATCCTCTCTaGGGGTTTTATAGCCATCTCGAAGGAAGCGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: RQGHNAIGVDPL*GFYSHLEGSDS Trigger: GCTGTCGCTTCCTTCGAGATGGCTATAAAACCCCAAGAGAGGATCCACACCGATTGCATTATGACCCTGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CAA 72 bp | ACACGGTTGAGCACTGACTCCACATGGACGGCAAACTaGATCTCACAAGGGGTCATCTCTTGGGTTGTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: TRLSTDSTWTAN*ISQGVISWVVE Trigger: CTCGACAACCCAAGAGATGACCCCTTGTGAGATCAAGTTTGCCGTCCATGTGGAGTCAGTGCTCAACCGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CAA 90 bp | GAGGATGGGGTGCTGGACCTCACAGACTTGATGGAATGCAAACTGTaGGACATGGTCTGGCCCAAAGGAAAGAACTGCTCATCAGCACTA | + |
|
Preference number: 6 (lower is better) Translates to: EDGVLDLTDLMECKL*DMVWPKGKNCSSAL Trigger: TAGTGCTGATGAGCAGTTCTTTCCTTTGGGCCAGACCATGTCCAACAGTTTGCATTCCATCAAGTCTGTGAGGTCCAGCACCCCATCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS TCA 72 bp | GGCCACTTCGTCAAGGGTAAAAATAATACGCAAACCTaGGGCTGTCATCTGGGCCAGGAACAGGAGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GHFVKGKNNTQT*GCHLGQEQEEE Trigger: CTCTTCCTCCTGTTCCTGGCCCAGATGACAGCCTCAGGTTTGCGTATTATTTTTACCCTTGACGAAGTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 72 bp | CCACCGAGCTTGCATTCAGTTCCGGAATGCCCTGATTaGTTTTATCTCCACGCTCCCACATCCCATAATCAG | + |
|
Preference number: 6 (lower is better) Translates to: PPSLHSVPECPD*FYLHAPTSHNQ Trigger: CTGATTATGGGATGTGGGAGCGTGGAGATAAAACCAATCAGGGCATTCCGGAACTGAATGCAAGCTCGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 72 bp | GGGCAGCTTTCCCAGTGGAACTCGGTCTACTGTGTGTaGATTCTTATACTCTTCATCCACCTTGTCTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GQLSQWNSVYCV*ILILFIHLVWW Trigger: CCACCAGACAAGGTGGATGAAGAGTATAAGAATCCACACACAGTAGACCGAGTTCCACTGGGAAAGCTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 72 bp | CAAGGACTGTCCCCAAAGATGGGGCAGCTTTCCCAGTaGAACTCGGTCTACTGTGTGTGGATTCTTATACTC | + |
|
Preference number: 6 (lower is better) Translates to: QGLSPKMGQLSQ*NSVYCVWILIL Trigger: GAGTATAAGAATCCACACACAGTAGACCGAGTTCCACTGGGAAAGCTGCCCCATCTTTGGGGACAGTCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 72 bp | TTGAGGACTGCTGTCTTCCAGGTATCCTCCCAGGTCTaGCTCACTGTCAGGACTAAAGCTCCTATCAGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LRTAVFQVSSQV*LTVRTKAPISD Trigger: ATCACTGATAGGAGCTTTAGTCCTGACAGTGAGCCAGACCTGGGAGGATACCTGGAAGACAGCAGTCCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS GCA 72 bp | TATCCTCATCACGGTCAGCATTCTTGCGGTAGGCCATaGCCAGGCCCCAAACAGCCAATATGCTATAGATAT | + |
|
Preference number: 6 (lower is better) Translates to: YPHHGQHSCGRP*PGPKQPICYRY Trigger: ATATCTATAGCATATTGGCTGTTTGGGGCCTGGGCATGGCCTACCGCAAGAATGCTGACCGTGATGAGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 ENSMUST00000139587.8 |
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| CDS CCA 72 bp | TCAGGTAGGACGTGGATCACCGATTTGCGTCCTCCATaGGCTCCAAAAAGATCTAGTTCATCAATGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SGRTWITDLRPP*APKRSSSSMAS Trigger: TGAGGCCATTGATGAACTAGATCTTTTTGGAGCCCATGGAGGACGCAAATCGGTGATCCACGTCCTACCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 72 bp | GTGTGGATTCTTATACTCTTCATCCACCTTGTCTGGTaGGATGGCATAGAGTTCTGGCACCAAGTGGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: VWILILFIHLVW*DGIEFWHQVDP Trigger: GGGATCCACTTGGTGCCAGAACTCTATGCCATCCCACCAGACAAGGTGGATGAAGAGTATAAGAATCCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CAA 90 bp | GGATGTGCTTTGAAGAAGGTGGCTGATATACTGGTCAAGTTCATCTaGGCTTTCTTGAGGACTGCTGTCTTCCAGGTATCCTCCCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GCALKKVADILVKFI*AFLRTAVFQVSSQV Trigger: GACCTGGGAGGATACCTGGAAGACAGCAGTCCTCAAGAAAGCCAAGATGAACTTGACCAGTATATCAGCCACCTTCTTCAAAGCACATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS TCA 72 bp | TGGCATGTAGACTGTCCTTGGTACTCTGAGTGTGCTTaGACTTCTCCACTTTGTCCACCTGCCTCATCATAC | + |
|
Preference number: 6 (lower is better) Translates to: WHVDCPWYSECA*TSPLCPPASSY Trigger: GTATGATGAGGCAGGTGGACAAAGTGGAGAAGTTCAAGCACACTCAGAGTACCAAGGACAGTCTACATGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS TCA 72 bp | GGATATGATGCAGAAGGCTCTTCATGTCGAAAGGGCTaGGGTTCATCAAGCTCTCCGAAGCTTCTTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GYDAEGSSCRKG*GSSSSPKLLFL Trigger: CAGGAAAAGAAGCTTCGGAGAGCTTGATGAACCTCAGCCCTTTCGACATGAAGAGCCTTCTGCATCATATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS GCA 72 bp | GCTCAACTTCATCAGGTAGGACGTGGATCACCGATTTaGGTCCTCCATGGGCTCCAAAAAGATCTAGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: AQLHQVGRGSPI*VLHGLQKDLVH Trigger: ATGAACTAGATCTTTTTGGAGCCCATGGAGGACGCAAATCGGTGATCCACGTCCTACCTGATGAAGTTGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS GCA 72 bp | GCTCTTGGCAACATGGAGAAAAGAATTGACTGGCAGTaGTCAACTTCATCAGGTAGGACGTGGATCACCGAT | + |
|
Preference number: 6 (lower is better) Translates to: ALGNMEKRIDWQ*STSSGRTWITD Trigger: ATCGGTGATCCACGTCCTACCTGATGAAGTTGAGCACTGCCAGTCAATTCTTTTCTCCATGTTGCCAAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS GCA 72 bp | TCTGCTTGGTCCTGTAGGTTTGAGCAGTCTTTCAGTTaGCCAACTAGCTTCTCACAGTCCACTTCATCATGG | + |
|
Preference number: 6 (lower is better) Translates to: SAWSCRFEQSFS*PTSFSQSTSSW Trigger: CCATGATGAAGTGGACTGTGAGAAGCTAGTTGGGCAACTGAAAGACTGCTCAAACCTACAGGACCAAGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 72 bp | AAATTCCTGTGGCTTGGTCTTTTTCCAGGATGTCTGTaGTTCCAAATGACACCTGGTCCTGCAGGAACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: KFLWLGLFPGCL*FQMTPGPAGTA Trigger: AGCTGTTCCTGCAGGACCAGGTGTCATTTGGAACCACAGACATCCTGGAAAAAGACCAAGCCACAGGAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 |
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| CDS CAA 72 bp | TGCTCAACTTCATCAGGTAGGACGTGGATCACCGATTaGCGTCCTCCATGGGCTCCAAAAAGATCTAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CSTSSGRTWITD*RPPWAPKRSSS Trigger: TGAACTAGATCTTTTTGGAGCCCATGGAGGACGCAAATCGGTGATCCACGTCCTACCTGATGAAGTTGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 72 bp | GTTGATGCTCTTGGCAACATGGAGAAAAGAATTGACTaGCAGTGCTCAACTTCATCAGGTAGGACGTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: VDALGNMEKRID*QCSTSSGRTWI Trigger: GATCCACGTCCTACCTGATGAAGTTGAGCACTGCCAGTCAATTCTTTTCTCCATGTTGCCAAGAGCATCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 72 bp | TCCAAGTTTGGCATATATGTGACTAAGAATTCGGCCTaGCTGGACTCGAATCGGATGCACATCAGCAATGCT | + |
|
Preference number: 6 (lower is better) Translates to: SKFGIYVTKNSA*LDSNRMHISNA Trigger: AGCATTGCTGATGTGCATCCGATTCGAGTCCAGCCAGGCCGAATTCTTAGTCACATATATGCCAAACTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CCA 72 bp | ACAGACTTGATGGAATGCAAACTGTTGGACATGGTCTaGCCCAAAGGAAAGAACTGCTCATCAGCACTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TDLMECKLLDMV*PKGKNCSSALA Trigger: AGCTAGTGCTGATGAGCAGTTCTTTCCTTTGGGCCAGACCATGTCCAACAGTTTGCATTCCATCAAGTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS TCA 72 bp | AGAGTTCTGGCACCAAGTGGATCCCATCTTTGCCTCTaGTTAATATTCCCTCCAAGGCTTCTCGGTATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RVLAPSGSHLCL*LIFPPRLLGIL Trigger: AAGAATACCGAGAAGCCTTGGAGGGAATATTAATCAGAGGCAAAGATGGGATCCACTTGGTGCCAGAACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033652.9 ENSMUST00000112376.2 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CAA 72 bp | TTGAAGAAGGTGGCTGATATACTGGTCAAGTTCATCTaGGCTTTCTTGAGGACTGCTGTCTTCCAGGTATCC | + |
|
Preference number: 6 (lower is better) Translates to: LKKVADILVKFI*AFLRTAVFQVS Trigger: GGATACCTGGAAGACAGCAGTCCTCAAGAAAGCCAAGATGAACTTGACCAGTATATCAGCCACCTTCTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS CAA 72 bp | AAAGAATGTACAGAATGTCTGCTTGGTCCTGTAGGTTaGAGCAGTCTTTCAGTTGCCCAACTAGCTTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: KECTECLLGPVG*SSLSVAQLASH Trigger: GTGAGAAGCTAGTTGGGCAACTGAAAGACTGCTCAAACCTACAGGACCAAGCAGACATTCTGTACATTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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| CDS TCA 72 bp | TCTTCTAGTTTTCTAATTGTAGAAAGAACTGCAGGATaGATGTCTGATCCATCATTTGTGAGCATGGTATGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSFLIVERTAG*MSDPSFVSMVC Trigger: GCATACCATGCTCACAAATGATGGATCAGACATTCATCCTGCAGTTCTTTCTACAATTAGAAAACTAGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033652.9 ENSMUST00000112377.8 ENSMUST00000112380.9 |
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