Pregenerated sensors for PHIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032253Ensembl transcript IDs: ENSMUST00000034787.12, ENSMUST00000186089.7, ENSMUST00000189985.2, ENSMUST00000190822.2
Found 260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGCACTACTACCCTCCGACTCCAAGCAACAAGATCTCGCTCTGTaGCTATTTCACTTCTCGGAGCATTGCTGTGCATCTGCCGTACAC | + |
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Preference number: 1 (lower is better) Translates to: QALLPSDSKQQDLAL*LFHFSEHCCASAVH Trigger: GTGTACGGCAGATGCACAGCAATGCTCCGAGAAGTGAAATAGCCACAGAGCGAGATCTTGTTGCTTGGAGTCGGAGGGTAGTAGTGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR TCA 90 bp | TGCTGGCTCAAAACTTGGTTCAATCCTGAAGAAGTTACTCCCATCTaGGGAATGAGCTGCTCCTCCCTGCAGTTCTCCCGACCAGGAACC | + |
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Preference number: 1 (lower is better) Translates to: CWLKTWFNPEEVTPI*GMSCSSLQFSRPGT Trigger: GGTTCCTGGTCGGGAGAACTGCAGGGAGGAGCAGCTCATTCCTCAGATGGGAGTAACTTCTTCAGGATTGAACCAAGTTTTGAGCCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR GCA 90 bp | GGAACAGTAAAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTaGTACCGTGGAGCAAGGCTGCCACTTATGACACGGTGCTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: GTVKKVRSVCTKERA*YRGARLPLMTRCSR Trigger: CCTGGAGCACCGTGTCATAAGTGGCAGCCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTTTACTGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR GCA 90 bp | ACAAGATCTCGCTCTGTGGCTATTTCACTTCTCGGAGCATTGCTGTaGATCTGCCGTACACCTTCGATTTGGCCACTGCGCCTTAATCCT | + |
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Preference number: 1 (lower is better) Translates to: TRSRSVAISLLGALL*ICRTPSIWPLRLNP Trigger: AGGATTAAGGCGCAGTGGCCAAATCGAAGGTGTACGGCAGATGCACAGCAATGCTCCGAGAAGTGAAATAGCCACAGAGCGAGATCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR GCA 90 bp | AAGCAACAAGATCTCGCTCTGTGGCTATTTCACTTCTCGGAGCATTaGTGTGCATCTGCCGTACACCTTCGATTTGGCCACTGCGCCTTA | + |
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Preference number: 1 (lower is better) Translates to: KQQDLALWLFHFSEH*CASAVHLRFGHCAL Trigger: TAAGGCGCAGTGGCCAAATCGAAGGTGTACGGCAGATGCACAGCAATGCTCCGAGAAGTGAAATAGCCACAGAGCGAGATCTTGTTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR TCA 90 bp | TCAAAACTTGGTTCAATCCTGAAGAAGTTACTCCCATCTGAGGAATaGGCTGCTCCTCCCTGCAGTTCTCCCGACCAGGAACCAATCGCT | + |
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Preference number: 1 (lower is better) Translates to: SKLGSILKKLLPSEE*AAPPCSSPDQEPIA Trigger: AGCGATTGGTTCCTGGTCGGGAGAACTGCAGGGAGGAGCAGCTCATTCCTCAGATGGGAGTAACTTCTTCAGGATTGAACCAAGTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR TCA 90 bp | CCTTCGATTTGGCCACTGCGCCTTAATCCTATATTTGGTGGTGAATaGACTTCGGAGGTAGAACTTACTGAGCCTCTGTTCACACGGCTG | + |
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Preference number: 1 (lower is better) Translates to: PSIWPLRLNPIFGGE*TSEVELTEPLFTRL Trigger: CAGCCGTGTGAACAGAGGCTCAGTAAGTTCTACCTCCGAAGTTCATTCACCACCAAATATAGGATTAAGGCGCAGTGGCCAAATCGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR GCA 90 bp | TCTCGCTCTGTGGCTATTTCACTTCTCGGAGCATTGCTGTGCATCTaGCGTACACCTTCGATTTGGCCACTGCGCCTTAATCCTATATTT | + |
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Preference number: 1 (lower is better) Translates to: SRSVAISLLGALLCI*RTPSIWPLRLNPIF Trigger: AAATATAGGATTAAGGCGCAGTGGCCAAATCGAAGGTGTACGGCAGATGCACAGCAATGCTCCGAGAAGTGAAATAGCCACAGAGCGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR TCA 90 bp | ACTTTGACTCCTCTTGCTAGATCCCACACTATCACATTTCCATCATaGCCAGCAGAGAAGAGAACTCTAGGATCAAATGGGTGTGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: TLTPLARSHTITFPS*PAEKRTLGSNGCGS Trigger: TGAGCCACACCCATTTGATCCTAGAGTTCTCTTCTCTGCTGGTCATGATGGAAATGTGATAGTGTGGGATCTAGCAAGAGGAGTCAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR TCA 90 bp | AATTTCCTTTCTGATAAACGAGATGTTTCTTACTGCATACCTAAGTaGGCGCTAACAACTCCTTCTGACGTACAAACAGTACATACAGGA | + |
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Preference number: 1 (lower is better) Translates to: NFLSDKRDVSYCIPK*ALTTPSDVQTVHTG Trigger: TCCTGTATGTACTGTTTGTACGTCAGAAGGAGTTGTTAGCGCTCACTTAGGTATGCAGTAAGAAACATCTCGTTTATCAGAAAGGAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR GCA 90 bp | TACAGCCAAGAGGCAGTTCTGTTAATGATTATGTATGAGAATGTTTaGTGTTCACTGTCCTACGTAAGTCATTTTCAAGTGAAACTGCTT | + |
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Preference number: 1 (lower is better) Translates to: YSQEAVLLMIMYENV*CSLSYVSHFQVKLL Trigger: AAGCAGTTTCACTTGAAAATGACTTACGTAGGACAGTGAACAGCAAACATTCTCATACATAATCATTAACAGAACTGCCTCTTGGCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR GCA 90 bp | GACAATTCTTTAGTAACCCACCAACCTTTAGTTGTAGTGAAACACTaGAAAACAACAATGGAAATAAGGCCCTTAATTATCTGTTTATGC | + |
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Preference number: 1 (lower is better) Translates to: DNSLVTHQPLVVVKH*KTTMEIRPLIICLC Trigger: GCATAAACAGATAATTAAGGGCCTTATTTCCATTGTTGTTTTGCAGTGTTTCACTACAACTAAAGGTTGGTGGGTTACTAAAGAATTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR CAA 90 bp | CAAGCAACAAGATCTCGCTCTGTGGCTATTTCACTTCTCGGAGCATaGCTGTGCATCTGCCGTACACCTTCGATTTGGCCACTGCGCCTT | + |
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Preference number: 2 (lower is better) Translates to: QATRSRSVAISLLGA*LCICRTPSIWPLRL Trigger: AAGGCGCAGTGGCCAAATCGAAGGTGTACGGCAGATGCACAGCAATGCTCCGAGAAGTGAAATAGCCACAGAGCGAGATCTTGTTGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR-3UTR TCA 90 bp | TGCTCCTCCCTGCAGTTCTCCCGACCAGGAACCAATCGCTGGTACCTTGATGGATTGTCTTCTATGCCTTaGAGATTTTGGCCTGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: CSSLQFSRPGTNRWYLDGLSSMP*RFWPAG Trigger: TCCAGCAGGCCAAAATCTTCAAGGCATAGAAGACAA...TCCATCAAGGTACCAGCGATTGGTTCCTGGTCGGGAGAACTGCAGGGAGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR-3UTR GCA 90 bp | ATCACTGGAGTAGTCACTGGAGCTGCCATCACTGTGCCATGCTCGCTCCTCTTCCATCAGGGGAGCATTTaGAGTCAAACACTGCACCAT | + |
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Preference number: 2 (lower is better) Translates to: ITGVVTGAAITVPCSLLFHQGSI*SQTLHH Trigger: ATGGTGCAGTGTTTGACTGCAAATGCTCCCCTGATG...GAAGAGGAGCGAGCATGGCACAGTGATGGCAGCTCCAGTGACTACTCCAGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR-3UTR TCA 90 bp | TACTCCCATCTGAGGAATGAGCTGCTCCTCCCTGCAGTTCTCCCGACCAGGAACAACACCTCATCTTCATaGCCCATTAGAACATGTATC | + |
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Preference number: 2 (lower is better) Translates to: YSHLRNELLLPAVLPTRNNTSSS*PIRTCI Trigger: GATACATGTTCTAATGGGTCATGAAGATGAGGTGTT...GTTCCTGGTCGGGAGAACTGCAGGGAGGAGCAGCTCATTCCTCAGATGGGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR-3UTR GCA 90 bp | TACTCCCATCTGAGGAATGAGCTGCTCCTCCCTGCAGTTCTCCCGACCAGGAACATCACTTGTCATACTTaGTACTGGACCCAAAACCAA | + |
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Preference number: 2 (lower is better) Translates to: YSHLRNELLLPAVLPTRNITCHT*YWTQNQ Trigger: TTGGTTTTGGGTCCAGTAGCAAGTATGACAAGTGAT...GTTCCTGGTCGGGAGAACTGCAGGGAGGAGCAGCTCATTCCTCAGATGGGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190822.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCTCAGGCACTACTACCCTCCGACTCCAAGCAACAAGATCTCGCTCTGTGTCCTGGTTTGCTTGCTaGCTCAAAACTTGGTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: ESSGTTTLRLQATRSRSVSWFAC*LKTWFN Trigger: ATTGAACCAAGTTTTGAGCCAGCAAGCAAACCAGGA...CACAGAGCGAGATCTTGTTGCTTGGAGTCGGAGGGTAGTAGTGCCTGAGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR-3UTR TCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGGGCTTTCCACTGCACTaGTTCTCAGTCTTTGGCACA | + |
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Preference number: 2 (lower is better) Translates to: KKVRSVCTKERACYRGARGFPLH*FSVFGT Trigger: TGTGCCAAAGACTGAGAATCAGTGCAGTGGAAAGCC...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR-3UTR TCA 90 bp | AGTACTTCACCTTCATCTGAAGAACTAGTTCCGTTTTCTAGCTCCTCTAAGGGCGGAGGTAGAACTTACTaGGCCTCTGTTCACACGGCT | + |
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Preference number: 2 (lower is better) Translates to: STSPSSEELVPFSSSSKGGGRTY*ASVHTA Trigger: AGCCGTGTGAACAGAGGCTCAGTAAGTTCTACCTCC...GCCCTTAGAGGAGCTAGAAAACGGAACTAGTTCTTCAGATGAAGGTGAAGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR-3UTR GCA 90 bp | TACTCCCATCTGAGGAATGAGCTGCTCCTCCCTGCAGTTCTCCCGACCAGGAACCCATATCTAACAAAATaGTTTTCCATTCCCTTCGTT | + |
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Preference number: 2 (lower is better) Translates to: YSHLRNELLLPAVLPTRNPYLTK*FSIPFV Trigger: AACGAAGGGAATGGAAAAGCATTTTGTTAGATATGG...GTTCCTGGTCGGGAGAACTGCAGGGAGGAGCAGCTCATTCCTCAGATGGGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR-3UTR GCA 90 bp | CCAGCAGAGAAGAGAACTCTAGGATCAAATGGGTGTGGCTCAAGAACAAACACCTCCCTTCGTTTAAACTaGCAAATTCGTGCTGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: PAEKRTLGSNGCGSRTNTSLRLN*QIRAVP Trigger: TGGGACAGCACGAATTTGGCAGTTTAAACGAAGGGA...GGTGTTTGTTCTTGAGCCACACCCATTTGATCCTAGAGTTCTCTTCTCTGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR-3UTR TCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGAAGTGTATGCTGTCCTaGCAGTCAAAAACAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: KKVRSVCTKERACYRGARKCMLS*QSKTGF Trigger: AAAGCCTGTTTTTGACTGTCAGGACAGCATACACTT...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR-3UTR TCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGACATCAGGGTCATGCTaGTATATATTTTCCCCATCC | + |
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Preference number: 2 (lower is better) Translates to: KKVRSVCTKERACYRGARTSGSC*YIFSPS Trigger: GGATGGGGAAAATATATATCAGCATGACCCTGATGT...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR-3UTR TCA 90 bp | AGTACTTCACCTTCATCTGAAGAACTAGTTCCGTTTTCTAGCTCCTCTAAGGGCCAATCGCTGGTACCTTaGTGGATGAGGATTTCCATC | + |
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Preference number: 2 (lower is better) Translates to: STSPSSEELVPFSSSSKGQSLVP*WMRISI Trigger: GATGGAAATCCTCATCCATCAAGGTACCAGCGATTG...GCCCTTAGAGGAGCTAGAAAACGGAACTAGTTCTTCAGATGAAGGTGAAGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGACCATGTCCCAAATGCTaGGATTATAGGCATGGACCA | + |
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Preference number: 2 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGPCPKC*DYRHGP Trigger: TGGTCCATGCCTATAATCCCAGCATTTGGGACATGG...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR CAA 90 bp | TGTTTCTTCCAGTGCAGATCTTGTACGGTAATTGTGCTGATTCGCTaGCTGCTTTTTAGAATCCCCAAGATCCAGGAAATGCTCATGAGC | + |
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Preference number: 2 (lower is better) Translates to: CFFQCRSCTVIVLIR*LLFRIPKIQEMLMS Trigger: GCTCATGAGCATTTCCTGGATCTTGGGGATTCTAAAAAGCAGCAAGCGAATCAGCACAATTACCGTACAAGATCTGCACTGGAAGAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR-3UTR TCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAAGTCCAAATACGGTCATaGATACACAGTGTCTTTAAC | + |
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Preference number: 2 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQVQIRS*IHSVFN Trigger: GTTAAAGACACTGTGTATTCATGACCGTATTTGGAC...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR-3UTR GCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAATCCACACTAAGACTGTaGGCACTTCCTTATATTGAA | + |
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Preference number: 2 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQSTLRL*ALPYIE Trigger: TTCAATATAAGGAAGTGCGCACAGTCTTAGTGTGGA...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR-3UTR GCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAAACAGGATGTTACTGTTaGAAAGAGGAGACTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQTGCYC*KEETFP Trigger: TGGAAAAGTCTCCTCTTTGCAACAGTAACATCCTGT...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR-3UTR CCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAATCACTGCTCAGAGGTTaGAACTCTCTGTGCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: NGFYFTIALVSCLLSTYQSLLRG*NSLCPI Trigger: AATGGGGCACAGAGAGTTCCAACCTCTGAGCAGTGA...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR-3UTR CCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGACTCAGCCTGAAAACTaGTATCTATGTTCCATGTAC | + |
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Preference number: 2 (lower is better) Translates to: KKVRSVCTKERACYRGARTQPEN*YLCSMY Trigger: GTACATGGAACATAGATACCAGTTTTCAGGCTGAGT...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGTGCAGATCTTGTACGGTAATTGTGCTGATTCGCTTGCTGCTTTTTAGACAAGATCTCGCTCTGTaGCTATTTCACTTCTCGGAG | + |
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Preference number: 2 (lower is better) Translates to: FQCRSCTVIVLIRLLLFRQDLAL*LFHFSE Trigger: CTCCGAGAAGTGAAATAGCCACAGAGCGAGATCTTG...TCTAAAAAGCAGCAAGCGAATCAGCACAATTACCGTACAAGATCTGCACTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR-3UTR TCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGGGCACAATCATTAAATaGGAGATTCTCTTTAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: KKVRSVCTKERACYRGARGTIIK*EILFRV Trigger: CACTCTAAAGAGAATCTCTCATTTAATGATTGTGCC...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATATCTCTAGAGAGACTGTaGGGGGTGAGACCTTTGGAT | + |
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Preference number: 2 (lower is better) Translates to: LPTEYVPSALCCPKLIKISLERL*GVRPLD Trigger: ATCCAAAGGTCTCACCCCTCACAGTCTCTCTAGAGA...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR-3UTR TCA 90 bp | AGTACTTCACCTTCATCTGAAGAACTAGTTCCGTTTTCTAGCTCCTCTAAGGGCAACTTGGTTCAATCCTaGAGAAGTTACTCCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: STSPSSEELVPFSSSSKGNLVQS*RSYSHL Trigger: CAGATGGGAGTAACTTCTTCAGGATTGAACCAAGTT...GCCCTTAGAGGAGCTAGAAAACGGAACTAGTTCTTCAGATGAAGGTGAAGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR-3UTR GCA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGATCTCTTCCTAGGGCATaGCTTCTGCTATCAGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGSLPRA*LLLSVK Trigger: TTTTACTGATAGCAGAAGGCATGCCCTAGGAAGAGA...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR-3UTR CCA 90 bp | TATCCTGGTTTGCTTGCTGGCTCAAAACTTGGTTCAATCCTGAAGAAGTTACTCAGGATCAAATGGGTGTaGCTCAAGAACAAACACCTC | + |
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Preference number: 2 (lower is better) Translates to: YPGLLAGSKLGSILKKLLRIKWV*LKNKHL Trigger: GAGGTGTTTGTTCTTGAGCCACACCCATTTGATCCT...GAGTAACTTCTTCAGGATTGAACCAAGTTTTGAGCCAGCAAGCAAACCAGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATACCAGAGCGCTCAAAGTaGTACTTACAGTCTTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: LPTEYVPSALCCPKLIKIPERSK*YLQSSD Trigger: GTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGG...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR-3UTR TCA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGAAAACAGCAAATGAAATaGATGTGGAACCGAATAACC | + |
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Preference number: 2 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGKQQMK*MWNRIT Trigger: GGTTATTCGGTTCCACATTCATTTCATTTGCTGTTT...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTTATAACTGTGTTGTCATGTCGATCCCAAGCTACCATAGTTACTTTCATTTGAAGATTTTGGCCTaGTGGACGAGTAGCCATATC | + |
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Preference number: 2 (lower is better) Translates to: CSYNCVVMSIPSYHSYFHLKILA*WTSSHI Trigger: GATATGGCTACTCGTCCAGCAGGCCAAAATCTTCAA...ATGAAAGTAACTATGGTAGCTTGGGATCGACATGACAACACAGTTATAACTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
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| 3UTR-3UTR TCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAATGTGGCCTAACTATCTaGCAAATGTTCCATAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: NGFYFTIALVSCLLSTYQCGLTI*QMFHSY Trigger: ATAGCTATGGAACATTTGTCAGATAGTTAGGCCACA...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR-3UTR GCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAACAAAGGACCCACCAGTaGATTATTTTCCTACATTTA | + |
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Preference number: 2 (lower is better) Translates to: NGFYFTIALVSCLLSTYQQRTHQ*IIFLHL Trigger: TAAATGTAGGAAAATAATGCACTGGTGGGTCCTTTG...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR-3UTR GCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAAATGTATGAGAATGTTTaGTGTTCACTGTCCTACGTA | + |
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Preference number: 2 (lower is better) Translates to: NGFYFTIALVSCLLSTYQMYENV*CSLSYV Trigger: TACGTAGGACAGTGAACAGCAAACATTCTCATACAT...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATACGCACTTCCTTATATTaGACACACCTTATAACTACA | + |
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Preference number: 2 (lower is better) Translates to: LPTEYVPSALCCPKLIKIRTSLY*THLITT Trigger: TGTAGTTATAAGGTGTGTTCAATATAAGGAAGTGCG...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAACAAATGGTGGGAACTaGAAAGTTATCTTTAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LPTEYVPSALCCPKLIKITNGGN*KVIFRG Trigger: TCCTCTAAAGATAACTTTCCAGTTCCCACCATTTGT...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTACAGGATAACAAATGGTaGGAACTGGAAAGTTATCTT | + |
|
Preference number: 2 (lower is better) Translates to: AFWYCCFYSPSLELGLPLQDNKW*ELESYL Trigger: AAGATAACTTTCCAGTTCCCACCATTTGTTATCCTG...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR-3UTR CCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAATTTCAGGATAACAAATaGTGGGAACTGGAAAGTTAT | + |
|
Preference number: 2 (lower is better) Translates to: NGFYFTIALVSCLLSTYQFQDNK*WELESY Trigger: ATAACTTTCCAGTTCCCACCATTTGTTATCCTGAAA...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAAATCCAGTCAAGGTCTaGAAAATGGTTCACTTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LPTEYVPSALCCPKLIKINPVKV*KMVHLV Trigger: AACTAAGTGAACCATTTTCCAGACCTTGACTGGATT...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR GCA 72 bp | ACTGGAGTAGTCACTGGAGCTGCCATCACTGTGCCATaGTCGCTCCTCTTCCTCAGAAGTCCCACCACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: TGVVTGAAITVP*SLLFLRSPTTD Trigger: GTCAGTGGTGGGACTTCTGAGGAAGAGGAGCGAGCATGGCACAGTGATGGCAGCTCCAGTGACTACTCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| 3UTR GCA 72 bp | CGCTCTGTGGCTATTTCACTTCTCGGAGCATTGCTGTaGATCTGCCGTACACCTTCGATTTGGCCACTGCGC | + |
|
Preference number: 3 (lower is better) Translates to: RSVAISLLGALL*ICRTPSIWPLR Trigger: GCGCAGTGGCCAAATCGAAGGTGTACGGCAGATGCACAGCAATGCTCCGAGAAGTGAAATAGCCACAGAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGCTGCTCCTCCCTGCAGTTCTCCCGACCAGGAACCAATCGCTGGTACCTTGAGGCCGATAATCACTaGTCATACTTGCTACTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: MSCSSLQFSRPGTNRWYLEADNH*SYLLLD Trigger: GTCCAGTAGCAAGTATGACAAGTGATTATCGGCCTC...AAGGTACCAGCGATTGGTTCCTGGTCGGGAGAACTGCAGGGAGGAGCAGCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190822.2 |
||
| 3UTR GCA 72 bp | GATCTCGCTCTGTGGCTATTTCACTTCTCGGAGCATTaGTGTGCATCTGCCGTACACCTTCGATTTGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: DLALWLFHFSEH*CASAVHLRFGH Trigger: GTGGCCAAATCGAAGGTGTACGGCAGATGCACAGCAATGCTCCGAGAAGTGAAATAGCCACAGAGCGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| 3UTR CCA 72 bp | CCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTaGAGCAAGGCTGCCACTTATGACACGGTGCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PISMYKRKSLLP*SKAATYDTVLQ Trigger: CTGGAGCACCGTGTCATAAGTGGCAGCCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGCTCAGGCACTACTACCCTCCGACTCCAAGCAACAAGATCTCGCTCTGTGCCAATCGCTGGTACCTaGATGGATGAGGATTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: ESSGTTTLRLQATRSRSVPIAGT*MDEDFH Trigger: ATGGAAATCCTCATCCATCAAGGTACCAGCGATTGG...CACAGAGCGAGATCTTGTTGCTTGGAGTCGGAGGGTAGTAGTGCCTGAGCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| 3UTR-3UTR CAA 90 bp | ATCACTGGAGTAGTCACTGGAGCTGCCATCACTGTGCCATGCTCGCTCCTCTTCGCAGTTATAACTGTGTaGTCATGTCGATCCCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ITGVVTGAAITVPCSLLFAVITV*SCRSQA Trigger: AGCTTGGGATCGACATGACAACACAGTTATAACTGC...GAAGAGGAGCGAGCATGGCACAGTGATGGCAGCTCCAGTGACTACTCCAGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCTGCAGTTCTCCCGACCAGGAACCAATCGCTGGTACCTTGATGGATGAGAATCACTTGTCATACTaGCTACTGGACCCAAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: PPCSSPDQEPIAGTLMDENHLSY*LLDPKP Trigger: TGGTTTTGGGTCCAGTAGCAAGTATGACAAGTGATT...CTCATCCATCAAGGTACCAGCGATTGGTTCCTGGTCGGGAGAACTGCAGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190822.2 |
||
| 3UTR GCA 72 bp | AGATGGAGATCACTGCTCAGAGGTTGGAACTCTCTGTaGCCCATTCTAGAGGTCCTCCACACTAAGACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RWRSLLRGWNSL*PILEVLHTKTV Trigger: CACAGTCTTAGTGTGGAGGACCTCTAGAATGGGGCACAGAGAGTTCCAACCTCTGAGCAGTGATCTCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR GCA 72 bp | CTCTCTAGAGAGACTGTGAGGGGTGAGACCTTTGGATaGTACATCTCTACTTCCAAAGGCTGGGAGACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSRETVRGETFG*YISTSKGWETA Trigger: TGCAGTCTCCCAGCCTTTGGAAGTAGAGATGTAGCATCCAAAGGTCTCACCCCTCACAGTCTCTCTAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR GCA 72 bp | GTGGCTATTTCACTTCTCGGAGCATTGCTGTGCATCTaGCGTACACCTTCGATTTGGCCACTGCGCCTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: VAISLLGALLCI*RTPSIWPLRLN Trigger: ATTAAGGCGCAGTGGCCAAATCGAAGGTGTACGGCAGATGCACAGCAATGCTCCGAGAAGTGAAATAGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| 3UTR CCA 72 bp | CTACCCTCCGACTCCAAGCAACAAGATCTCGCTCTGTaGCTATTTCACTTCTCGGAGCATTGCTGTGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: LPSDSKQQDLAL*LFHFSEHCCAS Trigger: AGATGCACAGCAATGCTCCGAGAAGTGAAATAGCCACAGAGCGAGATCTTGTTGCTTGGAGTCGGAGGGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCATTGCTGTGCATCTGCCGTACACCTTCGATTTGGCCACTGCGCCTTAATGCTATCTTGTCATACTaGCTACTGGACCCAAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: GALLCICRTPSIWPLRLNAILSY*LLDPKP Trigger: TGGTTTTGGGTCCAGTAGCAAGTATGACAAGATAGC...ATTAAGGCGCAGTGGCCAAATCGAAGGTGTACGGCAGATGCACAGCAATGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| 3UTR GCA 72 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTaGTACCGTGGAGCAAGGCTGCCACTTATGACACGG | + |
|
Preference number: 3 (lower is better) Translates to: KKVRSVCTKERA*YRGARLPLMTR Trigger: CCGTGTCATAAGTGGCAGCCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR CCA 72 bp | GGAGCATTGCTGTGCATCTGCCGTACACCTTCGATTTaGCCACTGCGCCTTAATCCTATATTTGGTGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GALLCICRTPSI*PLRLNPIFGGE Trigger: TTCACCACCAAATATAGGATTAAGGCGCAGTGGCCAAATCGAAGGTGTACGGCAGATGCACAGCAATGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| 3UTR TCA 72 bp | AAAGAGCCTGCTACCGTGGAGCAAGGCTGCCACTTATaGCACGGTGCTCCAGGTCTAGAAGAAATAAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: KEPATVEQGCHL*HGAPGLEEIKQ Trigger: TTGTTTTATTTCTTCTAGACCTGGAGCACCGTGTCATAAGTGGCAGCCTTGCTCCACGGTAGCAGGCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR TCA 72 bp | AAAACTTGGTTCAATCCTGAAGAAGTTACTCCCATCTaGGGAATGAGCTGCTCCTCCCTGCAGTTCTCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: KTWFNPEEVTPI*GMSCSSLQFSR Trigger: TCGGGAGAACTGCAGGGAGGAGCAGCTCATTCCTCAGATGGGAGTAACTTCTTCAGGATTGAACCAAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| 3UTR GCA 72 bp | TTGAACTCTTGGATGTTCCTGTCTCCATGTCCCAAATaGTGGGATTATAGGCATGGACCACTCAACTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LNSWMFLSPCPK*WDYRHGPLNSA Trigger: GGCTGAGTTGAGTGGTCCATGCCTATAATCCCAGCATTTGGGACATGGAGACAGGAACATCCAAGAGTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR GCA 72 bp | TGCTACCGTGGAGCAAGGCTGCCACTTATGACACGGTaGTCCAGGTCTAGAAGAAATAAAACAACATCCGTA | + |
|
Preference number: 3 (lower is better) Translates to: CYRGARLPLMTR*SRSRRNKTTSV Trigger: TACGGATGTTGTTTTATTTCTTCTAGACCTGGAGCACCGTGTCATAAGTGGCAGCCTTGCTCCACGGTAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR TCA 72 bp | TGGCCACTGCGCCTTAATCCTATATTTGGTGGTGAATaGACTTCGGAGGTAGAACTTACTGAGCCTCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: WPLRLNPIFGGE*TSEVELTEPLF Trigger: GAACAGAGGCTCAGTAAGTTCTACCTCCGAAGTTCATTCACCACCAAATATAGGATTAAGGCGCAGTGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| 3UTR GCA 72 bp | TGCTGTGCATCTGCCGTACACCTTCGATTTGGCCACTaGGCCTTAATCCTATATTTGGTGGTGAATGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: CCASAVHLRFGH*ALILYLVVNEL Trigger: AAGTTCATTCACCACCAAATATAGGATTAAGGCGCAGTGGCCAAATCGAAGGTGTACGGCAGATGCACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAAGTTAACTTTGAACTCTaGGATGTTCCTGTCTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQVNFEL*DVPVSM Trigger: CATGGAGACAGGAACATCCAAGAGTTCAAAGTTAAC...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR CCA 72 bp | ACCAGCAGAGAAGAGAACTCTAGGATCAAATGGGTGTaGCTCAAGAACAAACACCTCATCTTCATGACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: TSREENSRIKWV*LKNKHLIFMTH Trigger: ATGGGTCATGAAGATGAGGTGTTTGTTCTTGAGCCACACCCATTTGATCCTAGAGTTCTCTTCTCTGCTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAAAGTAACTCAAGTATCTaGGTCCTTTCAACCTACTCA | + |
|
Preference number: 3 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQSNSSI*VLSTYS Trigger: TGAGTAGGTTGAAAGGACCAAGATACTTGAGTTACT...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR-3UTR CAA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGAGCGCACTTCCTTATATaGAACACACCTTATAACTAC | + |
|
Preference number: 3 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGAHFLI*NTPYNY Trigger: GTAGTTATAAGGTGTGTTCAATATAAGGAAGTGCGC...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR GCA 72 bp | CATAATGGCTTCTATTTCACAATTGCTTTGGTAAGCTaGCTACTGAGTACGTACCAAGTGCTTTATGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: HNGFYFTIALVS*LLSTYQVLYAV Trigger: GACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR CCA 72 bp | ATTTATAGCTCAGATAATCTACTCACTGTACTTGTGTaGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTAC | + |
|
Preference number: 3 (lower is better) Translates to: IYSSDNLLTVLV*VDLQSAQSGTY Trigger: GTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACACAAGTACAGTGAGTAGATTATCTGAGCTATAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR-3UTR CAA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAAAAACTTCTACTAAACTaGGGCTTCGTGAAGTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NGFYFTIALVSCLLSTYQKLLLN*GFVKSG Trigger: TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTT...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR-3UTR CAA 90 bp | GTTATTAACTGCAGTTATAACTGTGTTGTCATGTCGATCCCAAGCTACCATAGTTTTGTCTTCTATGCCTaGAAGATTTTGGCCTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VINCSYNCVVMSIPSYHSFVFYA*KILACW Trigger: CCAGCAGGCCAAAATCTTCAAGGCATAGAAGACAAA...ACTATGGTAGCTTGGGATCGACATGACAACACAGTTATAACTGCAGTTAATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| 3UTR TCA 72 bp | TCTGATAAACGAGATGTTTCTTACTGCATACCTAAGTaGGCGCTAACAACTCCTTCTGACGTACAAACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SDKRDVSYCIPK*ALTTPSDVQTV Trigger: TACTGTTTGTACGTCAGAAGGAGTTGTTAGCGCTCACTTAGGTATGCAGTAAGAAACATCTCGTTTATCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR TCA 72 bp | CTACAGCCAAGAGGCAGTTCTGTTAATGATTATGTATaGGAATGTTTGCTGTTCACTGTCCTACGTAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LQPRGSSVNDYV*ECLLFTVLRKS Trigger: TGACTTACGTAGGACAGTGAACAGCAAACATTCTCATACATAATCATTAACAGAACTGCCTCTTGGCTGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR GCA 72 bp | ATCATGCTGTCTAAAGGACTAATATCCTGGTTTGCTTaGTGGCTCAAAACTTGGTTCAATCCTGAAGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: IMLSKGLISWFA*WLKTWFNPEEV Trigger: AACTTCTTCAGGATTGAACCAAGTTTTGAGCCAGCAAGCAAACCAGGATATTAGTCCTTTAGACAGCATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| 3UTR-3UTR CAA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAAGATTTGGTTACATCTTaGTACCATATCAGTTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: NGFYFTIALVSCLLSTYQDLVTS*YHISSQ Trigger: CTGAGAACTGATATGGTACAAAGATGTAACCAAATC...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR TCA 72 bp | GTCAAAATAAAACACTGTCAACTGAAACTAACTGTGTaGACGCTGCTAACATCATGCAGGGCTGAACTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: VKIKHCQLKLTV*TLLTSCRAELY Trigger: ATAAAGTTCAGCCCTGCATGATGTTAGCAGCGTTCACACAGTTAGTTTCAGTTGACAGTGTTTTATTTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR GCA 72 bp | GAGGCAGTTCTGTTAATGATTATGTATGAGAATGTTTaGTGTTCACTGTCCTACGTAAGTCATTTTCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: EAVLLMIMYENV*CSLSYVSHFQV Trigger: CACTTGAAAATGACTTACGTAGGACAGTGAACAGCAAACATTCTCATACATAATCATTAACAGAACTGCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAAGGGGGAGGCATGAGGTaGGGTGCCTGCTGCGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQGGGMR*GACCVC Trigger: GCAGACGCAGCAGGCACCTCACCTCATGCCTCCCCC...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGGATTCTGGTAGGTCCTaGGGTGCTCCTTCCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KKVRSVCTKERACYRGARDSGRS*GAPSRS Trigger: GGACCGGGAAGGAGCACCCCAGGACCTACCAGAATC...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGAGAAAAGGGGGAGGCATaGGGTGAGGTGCCTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGEKGEA*GEVPAA Trigger: CGCAGCAGGCACCTCACCTCATGCCTCCCCCTTTTC...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATATCCCGGTCCAGTCGGTaGGCCGGGGCAGCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKISRSSR*AGAAAP Trigger: AGGAGCTGCTGCCCCGGCGCACCGACTGGACCGGGA...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAACCTCCCACAGTGCAGTaGAGCCAGGGCAGATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQPPTVQ*SQGRSF Trigger: AAAGGATCTGCCCTGGCTGCACTGCACTGTGGGAGG...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTGCAGTTCTCCCGACCAGGAACCAATCGCTGGTACCTTGATGGATGAGAGGATCAAATGGGTGTaGCTCAAGAACAAACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPCSSPDQEPIAGTLMDERIKWV*LKNKHL Trigger: GAGGTGTTTGTTCTTGAGCCACACCCATTTGATCCT...CTCATCCATCAAGGTACCAGCGATTGGTTCCTGGTCGGGAGAACTGCAGGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190822.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAATTTCCTTTCAGGGCTTaGGGCAGCACTGCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQFPFRA*GSTAGQ Trigger: CTGTCCAGCAGTGCTGCCTCAAGCCCTGAAAGGAAA...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGCTCGGAGCATTGCTGTaGATCTGCCGTACACCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KKVRSVCTKERACYRGARLGALL*ICRTPS Trigger: CGAAGGTGTACGGCAGATGCACAGCAATGCTCCGAG...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR CAA 72 bp | AGATCTCGCTCTGTGGCTATTTCACTTCTCGGAGCATaGCTGTGCATCTGCCGTACACCTTCGATTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSRSVAISLLGA*LCICRTPSIWP Trigger: TGGCCAAATCGAAGGTGTACGGCAGATGCACAGCAATGCTCCGAGAAGTGAAATAGCCACAGAGCGAGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| CDS-3UTR CCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAAGGTCAGTGCTTCCAGTaGCCAAAAACATCCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQGQCFQ*PKTSHQ Trigger: CTGGTGGGATGTTTTTGGCCACTGGAAGCACTGACC...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | TGCCGTACACCTTCGATTTGGCCACTGCGCCTTAATCCTATATTTGGTGGTGAAGAAGAACATATCATTTaGACTCCAGGCCGAGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: CRTPSIWPLRLNPIFGGEEEHII*TPGRGR Trigger: GCGTCCTCGGCCTGGAGTGCAAATGATATGTTCTTC...TTCACCACCAAATATAGGATTAAGGCGCAGTGGCCAAATCGAAGGTGTACGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| CDS-3UTR GCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAAGCATTGCTGTGCATCTaGCGTACACCTTCGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQALLCI*RTPSIW Trigger: CCAAATCGAAGGTGTACGGCAGATGCACAGCAATGC...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGCAGGGCTGGAAAGTGTaGTCAAGGCTTTGGAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KKVRSVCTKERACYRGARQGWKV*SRLWNV Trigger: GACATTCCAAAGCCTTGAGCACACTTTCCAGCCCTG...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGCACATTCTTCATCCCTaGGATTGGCTCCCCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KKVRSVCTKERACYRGARHILHP*DWLPIL Trigger: GAGAATGGGGAGCCAATCCCAGGGATGAAGAATGTG...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR CAA 72 bp | CTTGTTATAAGAGAGATGGAGATCACTGCTCAGAGGTaGGAACTCTCTGTGCCCCATTCTAGAGGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVIREMEITAQR*ELSVPHSRGPP Trigger: TGGAGGACCTCTAGAATGGGGCACAGAGAGTTCCAACCTCTGAGCAGTGATCTCCATCTCTCTTATAACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR CAA 72 bp | CCTCTAAGGGCCTGGGTGTTTCTTCCAGTGCAGATCTaGTACGGTAATTGTGCTGATTCGCTTGCTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLRAWVFLPVQI*YGNCADSLAAF Trigger: AAAAGCAGCAAGCGAATCAGCACAATTACCGTACAAGATCTGCACTGGAAGAAACACCCAGGCCCTTAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| CDS-3UTR TCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGGAAGCACGTCAGCCCTaGTGGGATGCATGTTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: KKVRSVCTKERACYRGAREARQP*WDACYF Trigger: AAAATAACATGCATCCCATCAGGGCTGACGTGCTTC...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGGAGGCTCAGAGCCTTTaGGTTCTTCAAACTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KKVRSVCTKERACYRGAREAQSL*VLQTPL Trigger: AAGAGGAGTTTGAAGAACTCAAAGGCTCTGAGCCTC...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAAAAGAACAGCCAAAGGTaGACAGGTTCGAAGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQKNSQR*TGSKTP Trigger: TGGTGTCTTCGAACCTGTGCACCTTTGGCTGTTCTT...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAAGTTAACTGGAGACTCTaGCGGCCTCCCACAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NGFYFTIALVSCLLSTYQVNWRL*RPPTVQ Trigger: CTGCACTGTGGGAGGCCGCCAGAGTCTCCAGTTAAC...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAACAAGATCTCGCTCTGTaGCTATTTCACTTCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQQDLAL*LFHFSE Trigger: CTCCGAGAAGTGAAATAGCCACAGAGCGAGATCTTG...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGCATCTGTGGCACAAATaGACATCTCCTGGGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KKVRSVCTKERACYRGARHLWHK*TSPGKC Trigger: ACACTTCCCAGGAGATGTCCATTTGTGCCACAGATG...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAACATATTTGCAGCAAGTaGTCAGGTGCAAGGTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQHICSK*SGARCL Trigger: TAGACACCTTGCACCTGATCACTTGCTGCAAATATG...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAAGTTTACAGCCATGTCTaGTATTTCAGCAGCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQVYSHV*YFSSMS Trigger: GGACATGCTGCTGAAATATCAGACATGGCTGTAAAC...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAACCATTGGAGTGTCAATaGTGTCTCTGTAGTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQPLECQ*CLCSLD Trigger: ATCCAGACTACAGAGACATCATTGACACTCCAATGG...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAATCCCTTCGTTTAAACTaGCAAATTCGTGCTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQSLRLN*QIRAVP Trigger: TGGGACAGCACGAATTTGGCAGTTTAAACGAAGGGA...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGGATAGGCCACCACAGTaGAATACATGGGATAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KKVRSVCTKERACYRGARDRPPQ*NTWDKL Trigger: AAGCTTATCCCATGTATTGCACTGTGGTGGCCTATC...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGAGAGTTTTCCTGCTTTaGACACTGCAGATTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KKVRSVCTKERACYRGARRVFLL*TLQILG Trigger: CCCAAGAATCTGCAGTGTGCAAAGCAGGAAAACTCT...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGTCAGCCCTGATGGGATaGATGTTATTTTGCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KKVRSVCTKERACYRGARSALMG*MLFCSE Trigger: CTCTGAGCAAAATAACATGCATCCCATCAGGGCTGA...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGACTTCATCCCTGGGATTaGCTCCCCATTCTCCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGLHPWD*LPILHQ Trigger: TTGATGGAGAATGGGGAGCCAATCCCAGGGATGAAG...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAACCACAGTGCAATACATaGGATAAGCTTGAAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQPQCNT*DKLEGP Trigger: TGGACCTTCAAGCTTATCCCATGTATTGCACTGTGG...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | TCCATGAGAGTCTGTACATGCAAAGTGCTGACCATCAGGGGAGCATTTGCAGTCAACACCTCATCTTCATaGCCCATTAGAACATGTATC | + |
|
Preference number: 4 (lower is better) Translates to: SMRVCTCKVLTIRGAFAVNTSSS*PIRTCI Trigger: GATACATGTTCTAATGGGTCATGAAGATGAGGTGTT...GACTGCAAATGCTCCCCTGATGGTCAGCACTTTGCATGTACAGACTCTCATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190822.2 |
||
| CDS-3UTR TCA 90 bp | CATGAGAGTCTGTACATGCAAAGTGCTGACCATCAGGGGAGCATTTGCAGTCAAATCACATTTCCATCATaGCCAGCAGAGAAGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: HESLYMQSADHQGSICSQITFPS*PAEKRT Trigger: AGTTCTCTTCTCTGCTGGTCATGATGGAAATGTGAT...TTGACTGCAAATGCTCCCCTGATGGTCAGCACTTTGCATGTACAGACTCTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190822.2 |
||
| CDS-3UTR GCA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGACATCAGGGGAGCATTTaGAGTCAAACACTGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGHQGSI*SQTLHH Trigger: ATGGTGCAGTGTTTGACTGCAAATGCTCCCCTGATG...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGTCCTGGTTTGCTTGCTaGCTCAAAACTTGGTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KKVRSVCTKERACYRGARSWFAC*LKTWFN Trigger: ATTGAACCAAGTTTTGAGCCAGCAAGCAAACCAGGA...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATACACTGGAGTAGTCACTaGAGCTGCCATCACTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKIHWSSH*SCHHCA Trigger: GGCACAGTGATGGCAGCTCCAGTGACTACTCCAGTG...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGAATCAGAATAATCACTaGAGTAGTCACTGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KKVRSVCTKERACYRGARNQNNH*SSHWSC Trigger: GCAGCTCCAGTGACTACTCCAGTGATTATTCTGATT...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAAAGGAACTTTCTTTGGTaGCTGCAAGTTAATTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQRNFLW*LQVNSS Trigger: GCTGGAATTAACTTGCAGCCACCAAAGAAAGTTCCT...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAACACAGAACTGGATTCTaGTTTACCATTCATTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQHRTGF*FTIHLR Trigger: GCGCAAATGAATGGTAAACCAGAATCCAGTTCTGTG...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGACCCATTCAGCTTCCTTaGAAACAGAGTATCCGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGPIQLP*KQSIRN Trigger: ATTGCGGATACTCTGTTTTCAAGGAAGCTGAATGGG...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAGAAGTTACTCCCATCTaGGGAATGAGCTGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKIEVTPI*GMSCSS Trigger: GGAGGAGCAGCTCATTCCTCAGATGGGAGTAACTTC...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTAGGAGGTAGAACTTACTaGGCCTCTGTTCACACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AFWYCCFYSPSLELGLPLGGRTY*ASVHTA Trigger: AGCCGTGTGAACAGAGGCTCAGTAAGTTCTACCTCC...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | CAGAATTTACATAATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGGCCATCACTGTGCCATaGTCGCTCCTCTTCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QNLHNGFYFTIALVSCLLAITVP*SLLFLR Trigger: TCTGAGGAAGAGGAGCGAGCATGGCACAGTGATGGC...CAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATTATGTAAATTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAACTTAGTTCCATCTTATaGCATGGCTGCTTTTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQLSSIL*HGCFLG Trigger: TCCTAAAAAGCAGCCATGGCATAAGATGGAACTAAG...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | TCCATGAGAGTCTGTACATGCAAAGTGCTGACCATCAGGGGAGCATTTGCAGTCGAATGGGTTTCTCCCTaGAACCATATTGAAATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SMRVCTCKVLTIRGAFAVEWVSP*NHIEIR Trigger: TCTTATTTCAATATGGTTGCAGGGAGAAACCCATTC...GACTGCAAATGCTCCCCTGATGGTCAGCACTTTGCATGTACAGACTCTCATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190822.2 |
||
| CDS-3UTR CCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAAATCCGCAATGCTAGGTaGGCTACCGTAGTTAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: NGFYFTIALVSCLLSTYQIRNAR*ATVVNW Trigger: CCAGTTAACTACGGTAGCCCACCTAGCATTGCGGAT...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGCTTAGGAACTTTCTTTaGTGGCTGCAAGTTAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KKVRSVCTKERACYRGARLRNFL*WLQVNS Trigger: GGAATTAACTTGCAGCCACCAAAGAAAGTTCCTAAG...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR CAA 72 bp | ATAGCTCAGATAATCTACTCACTGTACTTGTGTGGGTaGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IAQIIYSLYLCG*ISRALKVVLTV Trigger: GACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACACAAGTACAGTGAGTAGATTATCTGAGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| 3UTR CAA 72 bp | CAGTGCAGATCTTGTACGGTAATTGTGCTGATTCGCTaGCTGCTTTTTAGAATCCCCAAGATCCAGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: QCRSCTVIVLIR*LLFRIPKIQEM Trigger: CATTTCCTGGATCTTGGGGATTCTAAAAAGCAGCAAGCGAATCAGCACAATTACCGTACAAGATCTGCACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| CDS-3UTR TCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAGATGCACTATGTCCCTaGAGAACAGCCAAAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKIDALCP*RTAKGA Trigger: TGCACCTTTGGCTGTTCTTCAGGGACATAGTGCATC...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGAAGTGGAGATGCTTTTaGAAACACAGAAGACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KKVRSVCTKERACYRGARKWRCF*KHRRLH Trigger: ATGAAGTCTTCTGTGTTTTCAAAAGCATCTCCACTT...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGACCATGGCCATTTACTTaGATGGTTCCTGGTATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGPWPFT*MVPGIR Trigger: TCTTATACCAGGAACCATTCAAGTAAATGGCCATGG...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAAAAGGAAGTTGCATGTTaGAGAAGGAAGCACGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NGFYFTIALVSCLLSTYQKEVAC*RRKHVS Trigger: GCTGACGTGCTTCCTTCTTCAACATGCAACTTCCTT...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGACATGTGCTGATAAACTaGAGTTGGAACAAGTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGHVLIN*SWNKSF Trigger: GAACGACTTGTTCCAACTGCAGTTTATCAGCACATG...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAGAAGAACATATCATTTaGACTCCAGGCCGAGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKIEEHII*TPGRGR Trigger: GCGTCCTCGGCCTGGAGTGCAAATGATATGTTCTTC...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATACGTACACCTTCGATTTaGCCACTGCGCCTTAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKIRTPSI*PLRLNP Trigger: AGGATTAAGGCGCAGTGGCCAAATCGAAGGTGTACG...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAACTCATCACCCATCTGTaGCACAAATGGACATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NGFYFTIALVSCLLSTYQLITHL*HKWTSP Trigger: AGGAGATGTCCATTTGTGCCACAGATGGGTGATGAG...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGAGGTACCCAGTTCTTCTaGAAAGACAGCATTATTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGGTQFF*KDSIIR Trigger: CCTAATAATGCTGTCTTTCCAGAAGAACTGGGTACC...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGAAACACCTCATCTTCATaGCCCATTAGAACATGTATC | + |
|
Preference number: 4 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGNTSSS*PIRTCI Trigger: GATACATGTTCTAATGGGTCATGAAGATGAGGTGTT...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATACAATCGCTGGTACCTTaGTGGATGAGGATTTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKIQSLVP*WMRISI Trigger: GATGGAAATCCTCATCCATCAAGGTACCAGCGATTG...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGATACTTCACCTTCATCTaGAGAACTAGTTCCGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGYFTFI*RTSSVF Trigger: GAAAACGGAACTAGTTCTTCAGATGAAGGTGAAGTA...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAAGTATTTCATGGTAAATaGTCCACCGGTCAGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NGFYFTIALVSCLLSTYQVFHGK*STGQFA Trigger: GGCAAACTGACCGGTGGATCATTTACCATGAAATAC...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | CAGAATTTACATAATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGTCTCTTCACGAGTTTTaGTGGTTGTCCTCCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QNLHNGFYFTIALVSCLLSLHEF*WLSSMA Trigger: GGCCATGGAGGACAACCATCAAAACTCGTGAAGAGA...CAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATTATGTAAATTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAAATCACAACTTCCAGCTaGTATCATAGTATTCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQITTSS*YHSILI Trigger: TATGAGAATACTATGATAGCAGCTGGAAGTTGTGAT...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGCCATATCTAACAAAATaGTTTTCCATTCCCTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KKVRSVCTKERACYRGARPYLTK*FSIPFV Trigger: AACGAAGGGAATGGAAAAGCATTTTGTTAGATATGG...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGAACTAATATCCTGGTTTaGTTGCTGGCTCAAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGTNILV*LLAQNL Trigger: CAAGTTTTGAGCCAGCAAGCAAACCAGGATATTAGT...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGAGGTTTACCATTCATTTaGGCAGCATTATGTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGGLPFI*AALCLG Trigger: ACCAAGACATAATGCTGCGCAAATGAATGGTAAACC...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAACACAATTGGGCTTCCTaGCTCATTGAATGTTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NGFYFTIALVSCLLSTYQHNWAS*LIECSC Trigger: ACACGAACATTCAATGAGCCAGGAAGCCCAATTGTG...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTAACTCCAGGAACACTCTaGGGAATTTCTTGCTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AFWYCCFYSPSLELGLPLTPGTL*GISCSR Trigger: TCTTGAGCAAGAAATTCCTCAGAGTGTTCCTGGAGT...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTATTGTCTTCTATGCCTTaGAGATTTTGGCCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AFWYCCFYSPSLELGLPLLSSMP*RFWPAG Trigger: TCCAGCAGGCCAAAATCTTCAAGGCATAGAAGACAA...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAAATCACATTTCCATCATaGCCAGCAGAGAAGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: NGFYFTIALVSCLLSTYQITFPS*PAEKRT Trigger: AGTTCTCTTCTCTGCTGGTCATGATGGAAATGTGAT...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGATCTAGTGTCATCAGCTaGTTTATTCCTCCAACAATT | + |
|
Preference number: 4 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGSSVIS*FIPPTI Trigger: AATTGTTGGAGGAATAAATCAGCTGATGACACTAGA...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGACTGTCGAAAAGGTTCTaGGTCTTCACATTGAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGLSKRF*VFTLKY Trigger: ATATTTCAATGTGAAGACTCAGAACCTTTTCGACAG...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGACCTTTCCATACCACATaGTTGCAGCTTTTATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGPFHTT*LQLLFV Trigger: AACAAATAAAAGCTGCAAGCATGTGGTATGGAAAGG...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | CAGAATTTACATAATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAAACTGCCAAATTCGTaGTGTCCCATCACGACTACC | + |
|
Preference number: 4 (lower is better) Translates to: QNLHNGFYFTIALVSCLLKLPNS*CPITTT Trigger: GGTAGTCGTGATGGGACAGCACGAATTTGGCAGTTT...CAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATTATGTAAATTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTATTGAAGATTTTGGCCTaGTGGACGAGTAGCCATATC | + |
|
Preference number: 4 (lower is better) Translates to: AFWYCCFYSPSLELGLPLLKILA*WTSSHI Trigger: GATATGGCTACTCGTCCAGCAGGCCAAAATCTTCAA...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAATGAGAGTCTGTACATaGAAAGTGCTGACCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKIMRVCT*KVLTIR Trigger: CCTGATGGTCAGCACTTTGCATGTACAGACTCTCAT...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTAGGTGCCTGCTGCGTCTaGTCATCTAATACAAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: AFWYCCFYSPSLELGLPLGACCV*SSNTKL Trigger: CAATTTTGTATTAGATGAGCAGACGCAGCAGGCACC...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | CAGAATTTACATAATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGTTCTTACACTCTCCTTaGTCTATGACTGCGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QNLHNGFYFTIALVSCLLFLHSP*SMTAAD Trigger: GTCAGCCGCAGTCATAGAGCAAGGAGAGTGTAAGAA...CAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATTATGTAAATTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATATGCTCAGAGTTTTCCTaGTTTGCACACTGCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKICSEFS*FAHCRF Trigger: GAATCTGCAGTGTGCAAAGCAGGAAAACTCTGAGCA...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS-3UTR CCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAATCTTCCATCGTCTGTaGCCCAGATTTTCACAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKIIFHRL*PRFSQD Trigger: GTCTTGTGAAAATCTGGGCCACAGACGATGGAAGAT...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAAGGATCAAATGGGTGTaGCTCAAGAACAAACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKIRIKWV*LKNKHL Trigger: GAGGTGTTTGTTCTTGAGCCACACCCATTTGATCCT...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAAAGTGGCAAAGTCCATTaGAGTGTCAATGATGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NGFYFTIALVSCLLSTYQSGKVH*SVNDVS Trigger: AGAGACATCATTGACACTCCAATGGACTTTGCCACT...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAACACACTGCAGATTCTTaGGCTTTCTACCTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NGFYFTIALVSCLLSTYQHTADS*AFYLFS Trigger: AGAAAAGAGGTAGAAAGCCCAAGAATCTGCAGTGTG...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAAACTTGGTTCAATCCTaGAGAAGTTACTCCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKINLVQS*RSYSHL Trigger: CAGATGGGAGTAACTTCTTCAGGATTGAACCAAGTT...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAAAGACTAGAAAATCTATaGCGTCAGGCATATCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: NGFYFTIALVSCLLSTYQRLENL*RQAYHG Trigger: ACCATGATATGCCTGACGTCATAGATTTTCTAGTCT...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAATATCCTGGTTTGCTTaGTGGCTCAAAACTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKIISWFA*WLKTWF Trigger: GAACCAAGTTTTGAGCCAGCAAGCAAACCAGGATAT...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAGGCCATTTCAACATATaGTTCATGCCCTTGTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKIGHFNI*FMPLSK Trigger: TTTCGACAAGGGCATGAAGCATATGTTGAAATGGCC...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAAACAGGCGTAAACTCATaGTGTAAATCCTTGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NGFYFTIALVSCLLSTYQTGVNS*CKSLIS Trigger: AGAGATCAAGGATTTACAGCATGAGTTTACGCCTGT...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | CAGAATTTACATAATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGTCTGGTAGAAGTCCCTaGAACATCAGCATCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QNLHNGFYFTIALVSCLLSGRSP*NISIFL Trigger: GAGAAAGATGCTGATGTTCCAGGGACTTCTACCAGA...CAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATTATGTAAATTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAAGATGTCTCTGTAGTCTaGATATTCAAGAAGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NGFYFTIALVSCLLSTYQDVSVV*IFKKIH Trigger: GTGGATCTTCTTGAATATCCAGACTACAGAGACATC...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | AAGAGGCCGATAATCACTTGTCATACTTGCTACTGGACCCAAAACCAAAAATTATTAATCCAGAACGAATaGGTTTCTCCCTGCAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KRPIITCHTCYWTQNQKLLIQNE*VSPCNH Trigger: ATGGTTGCAGGGAGAAACCCATTCGTTCTGGATTAA...TAATTTTTGGTTTTGGGTCCAGTAGCAAGTATGACAAGTGATTATCGGCCTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190822.2 |
||
| CDS-3UTR TCA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAAATTAAAAGATGTCCATaGGAGTCTGTACATGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NGFYFTIALVSCLLSTYQIKRCP*ESVHAK Trigger: CTTTGCATGTACAGACTCTCATGGACATCTTTTAAT...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTAATATTTGGTGGTGAATaGACTTCGGAGGTAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: AFWYCCFYSPSLELGLPLIFGGE*TSEVEL Trigger: AAGTTCTACCTCCGAAGTTCATTCACCACCAAATAT...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | CAGAATTTACATAATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGATCTCTTTGAGCCACTaGACAATGGTGAGAACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QNLHNGFYFTIALVSCLLISLSH*TMVRTV Trigger: TACAGTTCTCACCATTGTGCAGTGGCTCAAAGAGAT...CAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATTATGTAAATTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATACTATCTTGTCATACTTaGTACTGGACCCAAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKILSCHT*YWTQNQ Trigger: TTGGTTTTGGGTCCAGTAGCAAGTATGACAAGATAG...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | CAGAATTTACATAATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGCTTCGATTTGGCCACTaGGCCTTAATCCTATATTTG | + |
|
Preference number: 4 (lower is better) Translates to: QNLHNGFYFTIALVSCLLLRFGH*ALILYL Trigger: CAAATATAGGATTAAGGCGCAGTGGCCAAATCGAAG...CAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATTATGTAAATTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | CAGAATTTACATAATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGGGGTGTTTCTTCCAGTaGAGATCTTGTACGGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: QNLHNGFYFTIALVSCLLGCFFQ*RSCTVI Trigger: AATTACCGTACAAGATCTGCACTGGAAGAAACACCC...CAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATTATGTAAATTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAACTTTCTTTGGTGGCTaGAAGTTAATTCCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKITFFGG*KLIPAS Trigger: AGATGCTGGAATTAACTTGCAGCCACCAAAGAAAGT...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | CAGAATTTACATAATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGCAGATTTCACAATTaGGCTTCCTGGCTCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QNLHNGFYFTIALVSCLLSRFHN*ASWLIE Trigger: TTCAATGAGCCAGGAAGCCCAATTGTGAAATCTGCT...CAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATTATGTAAATTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTATTATTCTTTGTAGCATaGCTGAATGTGAGCGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: AFWYCCFYSPSLELGLPLLFFVA*LNVSGS Trigger: TGATCCGCTCACATTCAGCCATGCTACAAAGAATAA...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR TCA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTATCTGAATCTAGGTTGTaGGTTTTCATCTTCCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AFWYCCFYSPSLELGLPLSESRL*VFIFLL Trigger: CAAAAGGAAGATGAAAACTCACAACCTAGATTCAGA...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTATCCATACCACATGCTTaGAGCTTTTATTTGTTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: AFWYCCFYSPSLELGLPLSIPHA*SFYLFV Trigger: TACGAACAAATAAAAGCTGCAAGCATGTGGTATGGA...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAGTTAATTCCAGCATCTaGTGTCCAATCAGAATAATC | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKIVNSSI*CPIRII Trigger: GATTATTCTGATTGGACAGCAGATGCTGGAATTAAC...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAACATTGTTTCTTCCATaGCTGAATATCGTAAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKITLFLP*LNIVRL Trigger: CAGTCTTACGATATTCAGGCATGGAAGAAACAATGT...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | CAGAATTTACATAATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGCTTTACATAACTCCATaGGTGACTCATAATTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QNLHNGFYFTIALVSCLLLYITP*VTHNSQ Trigger: CTGGGAATTATGAGTCACCCATGGAGTTATGTAAAG...CAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATTATGTAAATTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAATCTTATGCCATGGCTaGTTTTTAGGATTGATACTA | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKIILCHG*FLGLIL Trigger: TAGTATCAATCCTAAAAAGCAGCCATGGCATAAGAT...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR GCA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTACCATCGTCTATACTTTaGATCATCAAATTGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AFWYCCFYSPSLELGLPLPSSIL*IIKLLS Trigger: AGACAACAATTTGATGATGCAAAGTATAGACGATGG...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTAACGTCAGGCATATCATaGTATTTCATGGTAAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: AFWYCCFYSPSLELGLPLTSGIS*YFMVND Trigger: ATCATTTACCATGAAATACCATGATATGCCTGACGT...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CCA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAACTTCTGACTTTAGCTaGGGTTTTAAGATCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPTEYVPSALCCPKLIKITSDFS*GFKILF Trigger: AAAAAGGATCTTAAAACCCCAGCTAAAGTCAGAAGT...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS GCA 90 bp | GCTACCGTAGTTAACTGGAGACTCTGGCGGCCTCCCACAGTGCAGTaGAGCCAGGGCAGATCCTTTCCATACCACATGCTTGCAGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ATVVNWRLWRPPTVQ*SQGRSFPYHMLAAF Trigger: AAAAGCTGCAAGCATGTGGTATGGAAAGGATCTGCCCTGGCTGCACTGCACTGTGGGAGGCCGCCAGAGTCTCCAGTTAACTACGGTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034787.12 ENSMUST00000189985.2 |
||
| CDS-3UTR CAA 90 bp | ATCACTGGAGTAGTCACTGGAGCTGCCATCACTGTGCCATGCTCGCTCCTCTTCCGAAGAACATATCATTaGCACTCCAGGCCGAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: ITGVVTGAAITVPCSLLFRRTYH*HSRPRT Trigger: CGTCCTCGGCCTGGAGTGCAAATGATATGTTCTTCG...GAAGAGGAGCGAGCATGGCACAGTGATGGCAGCTCCAGTGACTACTCCAGTGAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186089.7 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAATTTTCCTTTCAGGGCTaGAGGCAGCACTGCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQFSFQG*RQHCWT Trigger: TGTCCAGCAGTGCTGCCTCAAGCCCTGAAAGGAAAA...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS GCA 90 bp | GTGGCCAAAAACATCCCACCAGCACTGAACGAAGAACATATCATTTaGACTCCAGGCCGAGGACGCTCTGTAAATTTTGTGGGTCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VAKNIPPALNEEHII*TPGRGRSVNFVGLG Trigger: TCCAAGACCCACAAAATTTACAGAGCGTCCTCGGCCTGGAGTGCAAATGATATGTTCTTCGTTCAGTGCTGGTGGGATGTTTTTGGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034787.12 ENSMUST00000186089.7 ENSMUST00000189985.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAATCTACAGCTACACGGTaGCTCCTAGTTCGAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQSTATR*LLVRTT Trigger: TGTGGTTCGAACTAGGAGCAACCGTGTAGCTGTAGA...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAAAAGACAGGTATCTCTTaGAGCCACTGCACAATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQKTGIS*SHCTMV Trigger: CACCATTGTGCAGTGGCTCAAAGAGATACCTGTCTT...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGAGTTCTCCATTCTTCTaGTCTACTAGCCACACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KKVRSVCTKERACYRGARSSPFF*STSHTS Trigger: GCTGGTGTGGCTAGTAGACAAGAAGAATGGAGAACT...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAAAGTGTGCTCAAGGCTTaGGAATGTCTCACAGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQSVLKA*ECLTEF Trigger: GAATTCTGTGAGACATTCCAAAGCCTTGAGCACACT...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS CCA 90 bp | CCTTCTTCTAGGTTGATGATCCTTGCGCTTTCTGGTAGAAGTCCCTaGAACATCAGCATCTTTCTCTTCTTCCTCAGAGTCAGACAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PSSRLMILALSGRSP*NISIFLFFLRVRQN Trigger: GTTTTGTCTGACTCTGAGGAAGAAGAGAAAGATGCTGATGTTCCAGGGACTTCTACCAGAAAGCGCAAGGATCATCAACCTAGAAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAACCATCAGGGGAGCATTaGCAGTCAAACACTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: NGFYFTIALVSCLLSTYQPSGEH*QSNTAP Trigger: TGGTGCAGTGTTTGACTGCAAATGCTCCCCTGATGG...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGAATCAGGGTACTCAGGTaGAAGAGGCTCTTGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGIRVLR*KRLLTF Trigger: GAAAGTCAAGAGCCTCTTCAACCTGAGTACCCTGAT...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGACAGAATTCTCTAGCATaGCTTTTCCTGGCATGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGQNSLA*LFLAWQ Trigger: CTGCCATGCCAGGAAAAGCAATGCTAGAGAATTCTG...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAATCCATGGCCATTTACTaGAATGGTTCCTGGTATAAG | + |
|
Preference number: 5 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQSMAIY*NGSWYK Trigger: CTTATACCAGGAACCATTCAAGTAAATGGCCATGGA...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGGGGATGCATGTTATTTaGCTCAGAGTTTTCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KKVRSVCTKERACYRGARGMHVI*LRVFLL Trigger: AAGCAGGAAAACTCTGAGCAAAATAACATGCATCCC...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS TCA 90 bp | TTTCAGAAAGGAAGTTGCATGTTGAAGAAGGAAGCACGTCAGCCCTaGTGGGATGCATGTTATTTTGCTCAGAGTTTTCCTGCTTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FQKGSCMLKKEARQP*WDACYFAQSFPALH Trigger: GTGCAAAGCAGGAAAACTCTGAGCAAAATAACATGCATCCCATCAGGGCTGACGTGCTTCCTTCTTCAACATGCAACTTCCTTTCTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATACGAAGAACATATCATTaGCACTCCAGGCCGAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: LPTEYVPSALCCPKLIKIRRTYH*HSRPRT Trigger: CGTCCTCGGCCTGGAGTGCAAATGATATGTTCTTCG...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAAAACCTGTTACTAGTGTaGGAAAACTGGATACTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQNLLLV*ENWILS Trigger: TGACAGTATCCAGTTTTCCAACACTAGTAACAGGTT...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGATTTGTCTTCTATGCCTaGAAGATTTTGGCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGFVFYA*KILACW Trigger: CCAGCAGGCCAAAATCTTCAAGGCATAGAAGACAAA...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGAGCAGTTATAACTGTGTaGTCATGTCGATCCCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGAVITV*SCRSQA Trigger: AGCTTGGGATCGACATGACAACACAGTTATAACTGC...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAAGATCCACCGGTCAGTTaGCCAGTATCAGGATCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: NGFYFTIALVSCLLSTYQDPPVS*PVSGSR Trigger: TCTAGATCCTGATACTGGCAAACTGACCGGTGGATC...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGAGGTTGAAGAGGCTCTaGACTTTCAATTGTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KKVRSVCTKERACYRGARRLKRL*TFNCSK Trigger: TTTGGAACAATTGAAAGTCAAGAGCCTCTTCAACCT...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATATCTTCATCCCTGGGATaGGCTCCCCATTCTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LPTEYVPSALCCPKLIKISSSLG*APHSPS Trigger: TGATGGAGAATGGGGAGCCAATCCCAGGGATGAAGA...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGAGGGCTTCCTGGCTCATaGAATGTTCGTGTATTATGT | + |
|
Preference number: 5 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGGLPGS*NVRVLC Trigger: ACATAATACACGAACATTCAATGAGCCAGGAAGCCC...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTAGTGTTAACTTCTACCTaGGGCTTCCTCCCAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AFWYCCFYSPSLELGLPLVLTST*GFLPGP Trigger: AGGACCTGGGAGGAAGCCCAAGGTAGAAGTTAACAC...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS TCA 90 bp | CAAATCCTCCTTGACAGCATTAGTTTCAGAAAGGAAGTTGCATGTTaGAGAAGGAAGCACGTCAGCCCTGATGGGATGCATGTTATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QILLDSISFRKEVAC*RRKHVSPDGMHVIL Trigger: CAAAATAACATGCATCCCATCAGGGCTGACGTGCTTCCTTCTTCAACATGCAACTTCCTTTCTGAAACTAATGCTGTCAAGGAGGATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGAAATATCCTGGTTTGCTaGCTGGCTCAAAACTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGNILVC*LAQNLV Trigger: AACCAAGTTTTGAGCCAGCAAGCAAACCAGGATATT...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGTTGATCTCCAGAGCGCTCAAAGTGGTACTTACAGTCTTCTGACTCAACTACTTTCTGGTTTCTaGGTTTTATGCTTAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: VWVDLQSAQSGTYSLLTQLLSGF*VLCLGT Trigger: AGTTCCTAAGCATAAAACCAAGAAACCAGAAAGTAG...TTGAGTCAGAAGACTGTAAGTACCACTTTGAGCGCTCTGGAGATCAACCCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGATATGCTTCATGCCCTaGTCGAAAATAATAAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: KKVRSVCTKERACYRGARICFMP*SKIINL Trigger: GAGGTTTATTATTTTCGACAAGGGCATGAAGCATAT...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAATACATGGGATAAGCTaGAAGGTCCACAGGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LPTEYVPSALCCPKLIKIIHGIS*KVHRGN Trigger: GTTGCCCCTGTGGACCTTCAAGCTTATCCCATGTAT...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTACTCTCTTCACGAGTTTaGATGGTTGTCCTCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: AFWYCCFYSPSLELGLPLLSSRV*MVVLHG Trigger: GCCATGGAGGACAACCATCAAAACTCGTGAAGAGAG...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | AAGAAGGTCCGATCAGTATGTACAAAAGAAAGAGCCTGCTACCGTGGAGCAAGGTGTAACAAATCCTCCTaGACAGCATTAGTTTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KKVRSVCTKERACYRGARCNKSS*TALVSE Trigger: TTCTGAAACTAATGCTGTCAAGGAGGATTTGTTACA...CCTTGCTCCACGGTAGCAGGCTCTTTCTTTTGTACATACTGATCGGACCTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | CAGAATTTACATAATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGTTGTACTTAGATCCGTaGGATAGGCCACCACAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QNLHNGFYFTIALVSCLLLYLDP*DRPPQC Trigger: GCACTGTGGTGGCCTATCCAACGGATCTAAGTACAA...CAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATTATGTAAATTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAGCACACTGCAGATTCTaGGGCTTTCTACCTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPTEYVPSALCCPKLIKIAHCRF*GFLPLF Trigger: GAAAAGAGGTAGAAAGCCCAAGAATCTGCAGTGTGC...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTATCCCATTCAGCTTCCTaGAAAACAGAGTATCCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: AFWYCCFYSPSLELGLPLSHSAS*KTEYPQ Trigger: TTGCGGATACTCTGTTTTCAAGGAAGCTGAATGGGA...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTAGCTGATAAACTGCAGTaGGAACAAGTCGTTCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: AFWYCCFYSPSLELGLPLADKLQ*EQVVQV Trigger: GACTTGAACGACTTGTTCCAACTGCAGTTTATCAGC...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
||
| CDS-3UTR CAA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAGCTATCTTGTCATACTaGCTACTGGACCCAAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: LPTEYVPSALCCPKLIKIAILSY*LLDPKP Trigger: TGGTTTTGGGTCCAGTAGCAAGTATGACAAGATAGC...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS-3UTR CAA 90 bp | CAGAATTTACATAATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGCCAATCGCTGGTACCTaGATGGATGAGGATTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: QNLHNGFYFTIALVSCLLPIAGT*MDEDFH Trigger: ATGGAAATCCTCATCCATCAAGGTACCAGCGATTGG...CAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATTATGTAAATTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS-3UTR CAA 90 bp | ACTCCTGTGACAACACTGAAACTTCTACTAAACTTGGGCTTCGTGAAGTCAGGATCCATCGTCTATACTTaGCATCATCAAATTGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: TPVTTLKLLLNLGFVKSGSIVYT*HHQIVV Trigger: GACAACAATTTGATGATGCAAAGTATAGACGATGGA...TCCTGACTTCACGAAGCCCAAGTTTAGTAGAAGTTTCAGTGTTGTCACAGGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS-3UTR CAA 90 bp | AATGGCTTCTATTTCACAATTGCTTTGGTAAGCTGCCTACTGAGTACGTACCAATCATGCTGTAAATCCTaGATCTCTTGCTTGGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: NGFYFTIALVSCLLSTYQSCCKS*ISCLVC Trigger: ACACACCAAGCAAGAGATCAAGGATTTACAGCATGA...TTGGTACGTACTCAGTAGGCAGCTTACCAAAGCAATTGTGAAATAGAAGCCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS-3UTR CAA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTACACTGCACCATGTCCTaGTCCTTCAATCATATTGAA | + |
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Preference number: 5 (lower is better) Translates to: AFWYCCFYSPSLELGLPLHCTMS*SFNHIE Trigger: TTCAATATGATTGAAGGACAAGGACATGGTGCAGTG...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS-3UTR CAA 90 bp | GCTTTTTGGTATTGCTGCTTTTATAGCCCTAGTCTTGAACTTGGTTTGCCATTAGCCTTAATCCTATATTaGGTGGTGAATGAACTTCGG | + |
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Preference number: 5 (lower is better) Translates to: AFWYCCFYSPSLELGLPLALILY*VVNELR Trigger: CCGAAGTTCATTCACCACCAAATATAGGATTAAGGC...TAATGGCAAACCAAGTTCAAGACTAGGGCTATAAAAGCAGCAATACCAAAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS-3UTR CAA 90 bp | CTGCCTACTGAGTACGTACCAAGTGCTTTATGCTGTCCAAAACTAATCAAAATAGTTTCAGAAAGGAAGTaGCATGTTGAAGAAGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: LPTEYVPSALCCPKLIKIVSERK*HVEEGS Trigger: GCTTCCTTCTTCAACATGCAACTTCCTTTCTGAAAC...TATTTTGATTAGTTTTGGACAGCATAAAGCACTTGGTACGTACTCAGTAGGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS GCA 72 bp | GGTAGGTCCTGGGGTGCTCCTTCCCGGTCCAGTCGGTaGGCCGGGGCAGCAGCTCCTTCTCGGCCACTTCGC | + |
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Preference number: 6 (lower is better) Translates to: GRSWGAPSRSSR*AGAAAPSRPLR Trigger: GCGAAGTGGCCGAGAAGGAGCTGCTGCCCCGGCGCACCGACTGGACCGGGAAGGAGCACCCCAGGACCTACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS CCA 72 bp | AGTATCCGCAATGCTAGGTGGGCTACCGTAGTTAACTaGAGACTCTGGCGGCCTCCCACAGTGCAGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SIRNARWATVVN*RLWRPPTVQCS Trigger: GCTGCACTGCACTGTGGGAGGCCGCCAGAGTCTCCAGTTAACTACGGTAGCCCACCTAGCATTGCGGATACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034787.12 ENSMUST00000189985.2 |
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| CDS GCA 72 bp | GTTAACTGGAGACTCTGGCGGCCTCCCACAGTGCAGTaGAGCCAGGGCAGATCCTTTCCATACCACATGCTT | + |
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Preference number: 6 (lower is better) Translates to: VNWRLWRPPTVQ*SQGRSFPYHML Trigger: AAGCATGTGGTATGGAAAGGATCTGCCCTGGCTGCACTGCACTGTGGGAGGCCGCCAGAGTCTCCAGTTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034787.12 ENSMUST00000189985.2 |
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| CDS CAA 72 bp | GGCTGCTCGGTGACAACTGGATCTACAGCTACACGGTaGCTCCTAGTTCGAACCACAGAACTGGATTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: GCSVTTGSTATR*LLVRTTELDSG Trigger: ACCAGAATCCAGTTCTGTGGTTCGAACTAGGAGCAACCGTGTAGCTGTAGATCCAGTTGTCACCGAGCAGCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS TCA 72 bp | CAGTGCTTCCAGTGGCCAAAAACATCCCACCAGCACTaGACGAAGAACATATCATTTGCACTCCAGGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: QCFQWPKTSHQH*TKNISFALQAE Trigger: CTCGGCCTGGAGTGCAAATGATATGTTCTTCGTTCAGTGCTGGTGGGATGTTTTTGGCCACTGGAAGCACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034787.12 ENSMUST00000186089.7 ENSMUST00000189985.2 |
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| CDS CAA 72 bp | CCTTGGGCTTCCTCCCAGGTCCTCTCTTCACGAGTTTaGATGGTTGTCCTCCATGGCCATTTACTTGAATGG | + |
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Preference number: 6 (lower is better) Translates to: PWASSQVLSSRV*MVVLHGHLLEW Trigger: CCATTCAAGTAAATGGCCATGGAGGACAACCATCAAAACTCGTGAAGAGAGGACCTGGGAGGAAGCCCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS CAA 90 bp | AGTGGCCAAAAACATCCCACCAGCACTGAACGAAGAACATATCATTaGCACTCCAGGCCGAGGACGCTCTGTAAATTTTGTGGGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SGQKHPTSTERRTYH*HSRPRTLCKFCGSW Trigger: CCAAGACCCACAAAATTTACAGAGCGTCCTCGGCCTGGAGTGCAAATGATATGTTCTTCGTTCAGTGCTGGTGGGATGTTTTTGGCCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034787.12 ENSMUST00000186089.7 ENSMUST00000189985.2 |
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| CDS GCA 72 bp | TGCAGTGCAGCCAGGGCAGATCCTTTCCATACCACATaGTTGCAGCTTTTATTTGTTCGTAGCAAGGACTGT | + |
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Preference number: 6 (lower is better) Translates to: CSAARADPFHTT*LQLLFVRSKDC Trigger: ACAGTCCTTGCTACGAACAAATAAAAGCTGCAAGCATGTGGTATGGAAAGGATCTGCCCTGGCTGCACTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034787.12 ENSMUST00000189985.2 |
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| CDS CCA 72 bp | TTAGATCCGTTGGATAGGCCACCACAGTGCAATACATaGGATAAGCTTGAAGGTCCACAGGGGCAACAAATG | + |
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Preference number: 6 (lower is better) Translates to: LDPLDRPPQCNT*DKLEGPQGQQM Trigger: CATTTGTTGCCCCTGTGGACCTTCAAGCTTATCCCATGTATTGCACTGTGGTGGCCTATCCAACGGATCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS GCA 72 bp | AACATCCCACCAGCACTGAACGAAGAACATATCATTTaGACTCCAGGCCGAGGACGCTCTGTAAATTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: NIPPALNEEHII*TPGRGRSVNFV Trigger: CACAAAATTTACAGAGCGTCCTCGGCCTGGAGTGCAAATGATATGTTCTTCGTTCAGTGCTGGTGGGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034787.12 ENSMUST00000186089.7 ENSMUST00000189985.2 |
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| CDS CAA 72 bp | AGGAAGCACGTCAGCCCTGATGGGATGCATGTTATTTaGCTCAGAGTTTTCCTGCTTTGCACACTGCAGATT | + |
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Preference number: 6 (lower is better) Translates to: RKHVSPDGMHVI*LRVFLLCTLQI Trigger: AATCTGCAGTGTGCAAAGCAGGAAAACTCTGAGCAAAATAACATGCATCCCATCAGGGCTGACGTGCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS TCA 72 bp | GGAAGTTGCATGTTGAAGAAGGAAGCACGTCAGCCCTaGTGGGATGCATGTTATTTTGCTCAGAGTTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: GSCMLKKEARQP*WDACYFAQSFP Trigger: AGGAAAACTCTGAGCAAAATAACATGCATCCCATCAGGGCTGACGTGCTTCCTTCTTCAACATGCAACTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS CCA 72 bp | ACGGTTGCTCCTAGTTCGAACCACAGAACTGGATTCTaGTTTACCATTCATTTGCGCAGCATTATGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: TVAPSSNHRTGF*FTIHLRSIMSW Trigger: CCAAGACATAATGCTGCGCAAATGAATGGTAAACCAGAATCCAGTTCTGTGGTTCGAACTAGGAGCAACCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS CAA 72 bp | AAACATCCCACCAGCACTGAACGAAGAACATATCATTaGCACTCCAGGCCGAGGACGCTCTGTAAATTTTGT | + |
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Preference number: 6 (lower is better) Translates to: KHPTSTERRTYH*HSRPRTLCKFC Trigger: ACAAAATTTACAGAGCGTCCTCGGCCTGGAGTGCAAATGATATGTTCTTCGTTCAGTGCTGGTGGGATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034787.12 ENSMUST00000186089.7 ENSMUST00000189985.2 |
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| CDS CAA 90 bp | TTCTGTAACAAATCCTCCTTGACAGCATTAGTTTCAGAAAGGAAGTaGCATGTTGAAGAAGGAAGCACGTCAGCCCTGATGGGATGCATG | + |
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Preference number: 6 (lower is better) Translates to: FCNKSSLTALVSERK*HVEEGSTSALMGCM Trigger: CATGCATCCCATCAGGGCTGACGTGCTTCCTTCTTCAACATGCAACTTCCTTTCTGAAACTAATGCTGTCAAGGAGGATTTGTTACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS CAA 72 bp | AAATCCTCCTTGACAGCATTAGTTTCAGAAAGGAAGTaGCATGTTGAAGAAGGAAGCACGTCAGCCCTGATG | + |
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Preference number: 6 (lower is better) Translates to: KSSLTALVSERK*HVEEGSTSALM Trigger: CATCAGGGCTGACGTGCTTCCTTCTTCAACATGCAACTTCCTTTCTGAAACTAATGCTGTCAAGGAGGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS GCA 72 bp | TCTAACAAAATGCTTTTCCATTCCCTTCGTTTAAACTaGCAAATTCGTGCTGTCCCATCACGACTACCACTC | + |
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Preference number: 6 (lower is better) Translates to: SNKMLFHSLRLN*QIRAVPSRLPL Trigger: GAGTGGTAGTCGTGATGGGACAGCACGAATTTGGCAGTTTAAACGAAGGGAATGGAAAAGCATTTTGTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034787.12 ENSMUST00000189985.2 |
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| CDS CAA 72 bp | TGGGATGCATGTTATTTTGCTCAGAGTTTTCCTGCTTaGCACACTGCAGATTCTTGGGCTTTCTACCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: WDACYFAQSFPA*HTADSWAFYLF Trigger: AAAGAGGTAGAAAGCCCAAGAATCTGCAGTGTGCAAAGCAGGAAAACTCTGAGCAAAATAACATGCATCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS CAA 90 bp | TCAGGCATATCATGGTATTTCATGGTAAATGATCCACCGGTCAGTTaGCCAGTATCAGGATCTAGAAAAGCAAGTTTAAGGCAGCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: SGISWYFMVNDPPVS*PVSGSRKASLRQQR Trigger: CCTTTGCTGCCTTAAACTTGCTTTTCTAGATCCTGATACTGGCAAACTGACCGGTGGATCATTTACCATGAAATACCATGATATGCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS CAA 72 bp | ATTTTTCCGGGCCATTTCAACATATGCTTCATGCCCTaGTCGAAAATAATAAACCTCATCACCCATCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: IFPGHFNICFMP*SKIINLITHLW Trigger: CCACAGATGGGTGATGAGGTTTATTATTTTCGACAAGGGCATGAAGCATATGTTGAAATGGCCCGGAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS CAA 72 bp | CTGCCTCCACGACTCTTTTTCTGTAACAAATCCTCCTaGACAGCATTAGTTTCAGAAAGGAAGTTGCATGTT | + |
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Preference number: 6 (lower is better) Translates to: LPPRLFFCNKSS*TALVSERKLHV Trigger: AACATGCAACTTCCTTTCTGAAACTAATGCTGTCAAGGAGGATTTGTTACAGAAAAAGAGTCGTGGAGGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS CAA 90 bp | TTGGGTTTTCTGCCTCCACGACTCTTTTTCTGTAACAAATCCTCCTaGACAGCATTAGTTTCAGAAAGGAAGTTGCATGTTGAAGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: LGFLPPRLFFCNKSS*TALVSERKLHVEEG Trigger: TCCTTCTTCAACATGCAACTTCCTTTCTGAAACTAATGCTGTCAAGGAGGATTTGTTACAGAAAAAGAGTCGTGGAGGCAGAAAACCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS GCA 72 bp | TATGTTCTTCAAAGAAAGCAGACAGGCGTAAACTCATaGTGTAAATCCTTGATCTCTTGCTTGGTGTGTATG | + |
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Preference number: 6 (lower is better) Translates to: YVLQRKQTGVNS*CKSLISCLVCM Trigger: CATACACACCAAGCAAGAGATCAAGGATTTACAGCATGAGTTTACGCCTGTCTGCTTTCTTTGAAGAACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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| CDS CAA 72 bp | TCATGGTATTTCATGGTAAATGATCCACCGGTCAGTTaGCCAGTATCAGGATCTAGAAAAGCAAGTTTAAGG | + |
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Preference number: 6 (lower is better) Translates to: SWYFMVNDPPVS*PVSGSRKASLR Trigger: CCTTAAACTTGCTTTTCTAGATCCTGATACTGGCAAACTGACCGGTGGATCATTTACCATGAAATACCATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034787.12 |
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