Pregenerated sensors for PHGDH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053398Ensembl transcript IDs: ENSMUST00000065793.12, ENSMUST00000148488.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTTaGGCGGGTTTCTTCAGAAGAGCCTGTGGGGCTGAGAGTGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: ADALVLRSPLPIGHS*AGFFRRACGAESAE Trigger: TTCAGCACTCTCAGCCCCACAGGCTCTTCTGAAGAAACCCGCTCAACTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| 3UTR TCA 72 bp | CTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTTaGGCGGGTTTCTTCAGAAGAGCCTGTGGGGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: LVLRSPLPIGHS*AGFFRRACGAE Trigger: CTCAGCCCCACAGGCTCTTCTGAAGAAACCCGCTCAACTGTGACCTATAGGGAGAGGGGATCGCAGAACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR TCA 90 bp | TTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTTCCAGCGGCAGCTGCTaGACACCAAAGGAGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: LVQADALVLRSPLPIGHSSSGSC*TPKEAA Trigger: CGCCGCCTCCTTTGGTGTTCAGCAGCTGCCGCTGGA...ACTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | GTTGAGCGGGTTTCTTCAGAAGAGCCTGTGGGGCTGAGAGTGCTGAACCCCAGGTGCTTCTCCACCACCTaGAGCCCTCCATCTTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VERVSSEEPVGLRVLNPRCFSTT*SPPSCR Trigger: CCTGCAAGATGGAGGGCTGCAGGTGGTGGAGAAGCA...CCTGGGGTTCAGCACTCTCAGCCCCACAGGCTCTTCTGAAGAAACCCGCTCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | ACAGTTGAGCGGGTTTCTTCAGAAGAGCCTGTGGGGCTGAGAGTGCTGAACCCCCATTGTCCACACCTGTaGCAGCCCTGCCCACCACCT | + |
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Preference number: 4 (lower is better) Translates to: TVERVSSEEPVGLRVLNPHCPHL*QPCPPP Trigger: AGGTGGTGGGCAGGGCTGGCACAGGTGTGGACAATG...GGGGTTCAGCACTCTCAGCCCCACAGGCTCTTCTGAAGAAACCCGCTCAACTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | CCCTCTCCCTATAGGTCACAGTTGAGCGGGTTTCTTCAGAAGAGCCTGTGGGGCTTGGTAGGGAGCACCTaGCAGGGCCACAGTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PSPYRSQLSGFLQKSLWGLVGST*QGHSQE Trigger: CTCCTGACTGTGGCCCTGGCAGGTGCTCCCTACCAA...GCCCCACAGGCTCTTCTGAAGAAACCCGCTCAACTGTGACCTATAGGGAGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CCA 90 bp | GTTGAGCGGGTTTCTTCAGAAGAGCCTGTGGGGCTGAGAGTGCTGAACCCCAGGGGATGCCCTTCCTCGTaGCAGCCTCCAGATCCACAT | + |
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Preference number: 4 (lower is better) Translates to: VERVSSEEPVGLRVLNPRGCPSS*QPPDPH Trigger: ATGTGGATCTGGAGGCTGCCACGAGGAAGGGCATCC...CCTGGGGTTCAGCACTCTCAGCCCCACAGGCTCTTCTGAAGAAACCCGCTCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CCA 90 bp | TGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTTGAGCGGGTTTCTTGCTACCCTGCTCCCCTaGAACCCCAGGGTTGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: CPGSAIPSPYRSQLSGFLATLLP*NPRVVG Trigger: TCCCACAACCCTGGGGTTCCAGGGGAGCAGGGTAGC...AAGAAACCCGCTCAACTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR TCA 90 bp | GCGATCCCCTCTCCCTATAGGTCACAGTTGAGCGGGTTTCTTCAGAAGAGCCTGTCAGAAGGCCGACAATaGCTGCAGGGCTCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AIPSPYRSQLSGFLQKSLSEGRQ*LQGSGR Trigger: CCTGCCTGAGCCCTGCAGTCATTGTCGGCCTTCTGA...CAGGCTCTTCTGAAGAAACCCGCTCAACTGTGACCTATAGGGAGAGGGGATCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | TTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTTCTGGGCTTCCTTGGTaGTGGCACCCAGGTGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LVQADALVLRSPLPIGHSSGLPW*WHPGGD Trigger: GTCCCCACCTGGGTGCCAGCACCAAGGAAGCCCAGA...ACTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CCA 90 bp | GCGATCCCCTCTCCCTATAGGTCACAGTTGAGCGGGTTTCTTCAGAAGAGCCTGGCCCTGCCCACCACCTaGAGCTTCTCTGCTGCATTG | + |
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Preference number: 4 (lower is better) Translates to: AIPSPYRSQLSGFLQKSLALPTT*SFSAAL Trigger: CAATGCAGCAGAGAAGCTCCAGGTGGTGGGCAGGGC...CAGGCTCTTCTGAAGAAACCCGCTCAACTGTGACCTATAGGGAGAGGGGATCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CCA 90 bp | TCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTTGAGCATCGAAGCTGTTGCCTaGGGAATCTGCCTGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SGRCPGSAIPSPYRSQLSIEAVA*GICLAR Trigger: CCTGGCCAGGCAGATTCCCCAGGCAACAGCTTCGAT...GCTCAACTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CCA 90 bp | TTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTTCCCCACAGCGGCTCTaGGCTTCCTTGGTGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LVQADALVLRSPLPIGHSSPQRL*ASLVLA Trigger: TGCCAGCACCAAGGAAGCCCAGAGCCGCTGTGGGGA...ACTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR TCA 90 bp | GTTGAGCGGGTTTCTTCAGAAGAGCCTGTGGGGCTGAGAGTGCTGAACCCCAGGCGACTTCAGGAGAGATaGTGGGGTCATAGCCTACAG | + |
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Preference number: 4 (lower is better) Translates to: VERVSSEEPVGLRVLNPRRLQER*WGHSLQ Trigger: CTGTAGGCTATGACCCCATCATCTCTCCTGAAGTCG...CCTGGGGTTCAGCACTCTCAGCCCCACAGGCTCTTCTGAAGAAACCCGCTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | TGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTTGAGCGGGTTTCTTAGGCGTGCATCAGCGTaGCCATTGCTTCTGCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: CPGSAIPSPYRSQLSGFLRRASA*PLLLPD Trigger: GTCTGGCAGAAGCAATGGGCACGCTGATGCACGCCT...AAGAAACCCGCTCAACTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CCA 90 bp | CCCTCTCCCTATAGGTCACAGTTGAGCGGGTTTCTTCAGAAGAGCCTGTGGGGCGAGCATCTGCAGCATTaGTGTGGTGCCCTGGACCAA | + |
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Preference number: 4 (lower is better) Translates to: PSPYRSQLSGFLQKSLWGEHLQH*CGALDQ Trigger: TTGGTCCAGGGCACCACACCAATGCTGCAGATGCTC...GCCCCACAGGCTCTTCTGAAGAAACCCGCTCAACTGTGACCTATAGGGAGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | GGTATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCATGCAGCCCTCCATCTTaGAGGATCTTCCGGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GISSGRCPGSAIPSPYRSCSPPS*RIFRQQ Trigger: CTGCTGCCGGAAGATCCTGCAAGATGGAGGGCTGCA...TGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAATACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CCA 90 bp | GCGATCCCCTCTCCCTATAGGTCACAGTTGAGCGGGTTTCTTCAGAAGAGCCTGCCAAGGCTTGGTGTGTaGAGAGAAGGCACTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: AIPSPYRSQLSGFLQKSLPRLGV*REGTGE Trigger: CTCACCAGTGCCTTCTCTCCACACACCAAGCCTTGG...CAGGCTCTTCTGAAGAAACCCGCTCAACTGTGACCTATAGGGAGAGGGGATCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CCA 90 bp | ACAGTTGAGCGGGTTTCTTCAGAAGAGCCTGTGGGGCTGAGAGTGCTGAACCCCGACCAATCCAAGGCTTaGTGTGTGGAGAGAAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: TVERVSSEEPVGLRVLNPDQSKA*CVERRH Trigger: GTGCCTTCTCTCCACACACCAAGCCTTGGATTGGTC...GGGGTTCAGCACTCTCAGCCCCACAGGCTCTTCTGAAGAAACCCGCTCAACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CCA 90 bp | ATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGGGAACCCCAGGGTTGTaGGAGGTGGTGACATTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ISSGRCPGSAIPSPYRSQGTPGL*EVVTLR Trigger: CCTCAATGTCACCACCTCCCACAACCCTGGGGTTCC...CTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | TCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTTGAGCCACCTGGAGCTTCTCTaGTGCATTGATGACATCAGC | + |
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Preference number: 4 (lower is better) Translates to: SGRCPGSAIPSPYRSQLSHLELL*CIDDIS Trigger: GCTGATGTCATCAATGCAGCAGAGAAGCTCCAGGTG...GCTCAACTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | TGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTTGAGCGGGTTTCTTTGTAAACACATCCAGTaGAGCCCCAGCACACTGACC | + |
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Preference number: 4 (lower is better) Translates to: CPGSAIPSPYRSQLSGFLCKHIQ*SPSTLT Trigger: GGTCAGTGTGCTGGGGCTGCACTGGATGTGTTTACA...AAGAAACCCGCTCAACTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | GCGATCCCCTCTCCCTATAGGTCACAGTTGAGCGGGTTTCTTCAGAAGAGCCTGCATCAGCGTGCCCATTaGTTCTGCCAGACCAATCCA | + |
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Preference number: 4 (lower is better) Translates to: AIPSPYRSQLSGFLQKSLHQRAH*FCQTNP Trigger: TGGATTGGTCTGGCAGAAGCAATGGGCACGCTGATG...CAGGCTCTTCTGAAGAAACCCGCTCAACTGTGACCTATAGGGAGAGGGGATCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | TTACTAGGTATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAAGGCCGACAATGACTaGAGGGCTCAGGCAGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LLGISSGRCPGSAIPSPYKADND*RAQAGP Trigger: GGGACCTGCCTGAGCCCTGCAGTCATTGTCGGCCTT...ATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAATACCTAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CCA 90 bp | CCCTCTCCCTATAGGTCACAGTTGAGCGGGTTTCTTCAGAAGAGCCTGTGGGGCAGGATTGCATTCGGGTaGCCACCTCTCTTCCAATTC | + |
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Preference number: 4 (lower is better) Translates to: PSPYRSQLSGFLQKSLWGRIAFG*PPLFQF Trigger: GAATTGGAAGAGAGGTGGCCACCCGAATGCAATCCT...GCCCCACAGGCTCTTCTGAAGAAACCCGCTCAACTGTGACCTATAGGGAGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CCA 90 bp | ACAGTTGAGCGGGTTTCTTCAGAAGAGCCTGTGGGGCTGAGAGTGCTGAACCCCACCATGTCCACAAACTaGACTGCGATTTCCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: TVERVSSEEPVGLRVLNPTMSTN*TAISSP Trigger: TGGGGAGGAAATCGCAGTCCAGTTTGTGGACATGGT...GGGGTTCAGCACTCTCAGCCCCACAGGCTCTTCTGAAGAAACCCGCTCAACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CCA 90 bp | GTCACAGTTGAGCGGGTTTCTTCAGAAGAGCCTGTGGGGCTGAGAGTGCTGAACCTCCGTCAGACACCATaGAGGTTTGGTAGGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: VTVERVSSEEPVGLRVLNLRQTP*RFGRTA Trigger: TGCTGTCCTACCAAACCTCCATGGTGTCTGACGGAG...GTTCAGCACTCTCAGCCCCACAGGCTCTTCTGAAGAAACCCGCTCAACTGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CCA 90 bp | TTACTAGGTATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATTCCATGTTTCCAGGCTaGGCAGCAGGGAGGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: LLGISSGRCPGSAIPSPYSMFPG*AAGRTG Trigger: GCCTGTCCTCCCTGCTGCCCAGCCTGGAAACATGGA...ATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAATACCTAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | TTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTTCCTTGCTCAAGTTCTaGTTCTCCACCACCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LVQADALVLRSPLPIGHSSLLKF*FSTTCS Trigger: GCTGCAGGTGGTGGAGAAGCAGAACTTGAGCAAGGA...ACTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | TTACTAGGTATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATGTTGCCTGGGGAATCTaGCTGGCCAGGCACATGATC | + |
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Preference number: 4 (lower is better) Translates to: LLGISSGRCPGSAIPSPYVAWGI*LARHMI Trigger: GATCATGTGCCTGGCCAGGCAGATTCCCCAGGCAAC...ATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAATACCTAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | TTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTTTTCATCGAAGCTGTTaGCTGGGGAATCTGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LVQADALVLRSPLPIGHSFHRSC*LGNLPG Trigger: GCCAGGCAGATTCCCCAGGCAACAGCTTCGATGAAA...ACTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CCA 90 bp | ATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGCCTTGTGTAACCACCTaGATGGTCCCTTTAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: ISSGRCPGSAIPSPYRSQPCVTT*MVPLGE Trigger: CTCCCCTAAAGGGACCATCCAGGTGGTTACACAAGG...CTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | GCGATCCCCTCTCCCTATAGGTCACAGTTGAGCGGGTTTCTTCAGAAGAGCCTGTCTTCCGGTCCCATTTaGCATCTTTCATCGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: AIPSPYRSQLSGFLQKSLSSGPI*HLSSKL Trigger: CAGCTTCGATGAAAGATGGCAAATGGGACCGGAAGA...CAGGCTCTTCTGAAGAAACCCGCTCAACTGTGACCTATAGGGAGAGGGGATCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | TTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTCCTCTCTTCCAATTCTaGCGAGGCCAAGAATTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LVQADALVLRSPLPIGHSPLFQF*RGQEFP Trigger: TGGGAATTCTTGGCCTCGGCAGAATTGGAAGAGAGG...ACTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | ATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGCACCTTCATCCACAATaGCTCCTCGAGCACAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: ISSGRCPGSAIPSPYRSQHLHPQ*LLEHSS Trigger: TGAACTGTGCTCGAGGAGGCATTGTGGATGAAGGTG...CTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | TTACTAGGTATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATGTCCACAAACTGGACTaGGATTTCCTCCCCACAGCG | + |
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Preference number: 4 (lower is better) Translates to: LLGISSGRCPGSAIPSPYVHKLD*DFLPTA Trigger: CGCTGTGGGGAGGAAATCGCAGTCCAGTTTGTGGAC...ATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAATACCTAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CCA 90 bp | TGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTTGAGCGGGTTTCTTGGCAGGAGTGGGGTATaGACAGTTATAAAGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: CPGSAIPSPYRSQLSGFLGRSGV*TVIKSQ Trigger: CTGTGACTTTATAACTGTCCATACCCCACTCCTGCC...AAGAAACCCGCTCAACTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CCA 90 bp | TTACTAGGTATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATCTGATGACATTCTCGTaGTCCACTAAGGCCCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LLGISSGRCPGSAIPSPYLMTFS*STKARS Trigger: GGACCGGGCCTTAGTGGACCACGAGAATGTCATCAG...ATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAATACCTAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | TTACTAGGTATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATCGTGCCCATTGCTTCTaGCAGACCAATCCAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LLGISSGRCPGSAIPSPYRAHCF*QTNPRL Trigger: AAGCCTTGGATTGGTCTGGCAGAAGCAATGGGCACG...ATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAATACCTAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | TGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTTGAGCGGGTTTCTTAAGTTCACGTCTGCCTaGTTAGATGCTTCTCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: CPGSAIPSPYRSQLSGFLKFTSA*LDASLR Trigger: TCTGAGAGAAGCATCTAAGCAGGCAGACGTGAACTT...AAGAAACCCGCTCAACTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CCA 90 bp | GGTATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCAGGTAGAGGGCAGGAGTaGGGTATGGACAGTTATAAA | + |
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Preference number: 4 (lower is better) Translates to: GISSGRCPGSAIPSPYRSGRGQE*GMDSYK Trigger: TTTATAACTGTCCATACCCCACTCCTGCCCTCTACC...TGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | TTACTAGGTATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATCTGGAGCTTCTCTGCTaGATTGATGACATCAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LLGISSGRCPGSAIPSPYLELLC*IDDISS Trigger: ACTGCTGATGTCATCAATGCAGCAGAGAAGCTCCAG...ATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAATACCTAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR GCA 90 bp | TTACTAGGTATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAAAGCCTCCAATACATaGTGCTTCCATGTTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LLGISSGRCPGSAIPSPYKASNT*CFHVSR Trigger: CCTGGAAACATGGAAGCAGCATGTATTGGAGGCTTT...ATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAATACCTAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS GCA 90 bp | TGGTGTGGTGCCCTGGACCAAGCCCACGGCTTGGTAGGGAGCACCTaGCAGGGCCACAGTCAGGAGGCATTCCCCGCTACCCTGCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: WCGALDQAHGLVGST*QGHSQEAFPATLLP Trigger: GGGGAGCAGGGTAGCGGGGAATGCCTCCTGACTGTGGCCCTGGCAGGTGCTCCCTACCAAGCCGTGGGCTTGGTCCAGGGCACCACACCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS GCA 90 bp | GGTCCCTTTAGGGGAGCCAGCCCAGGCGTGCATCAGCGTGCCCATTaGTTCTGCCAGACCAATCCAAGGCTTGGTGTGTGGAGAGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: GPFRGASPGVHQRAH*FCQTNPRLGVWREG Trigger: GCCTTCTCTCCACACACCAAGCCTTGGATTGGTCTGGCAGAAGCAATGGGCACGCTGATGCACGCCTGGGCTGGCTCCCCTAAAGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS GCA 90 bp | AGACACCATGGAGGTTTGGTAGGACAGCAGCTGTACACCCGCCTCTaGCAGGAGGCCAATCATAGTGGGCAGCATCCCAGGGTCGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RHHGGLVGQQLYTRL*QEANHSGQHPRVGG Trigger: CCCTCCGACCCTGGGATGCTGCCCACTATGATTGGCCTCCTGGCAGAGGCGGGTGTACAGCTGCTGTCCTACCAAACCTCCATGGTGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS CCA 90 bp | TGGCACCTCTGGTCTGAAGACAGCTCCGTTGAGCATCTGCAGCATTaGTGTGGTGCCCTGGACCAAGCCCACGGCTTGGTAGGGAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: WHLWSEDSSVEHLQH*CGALDQAHGLVGST Trigger: GGTGCTCCCTACCAAGCCGTGGGCTTGGTCCAGGGCACCACACCAATGCTGCAGATGCTCAACGGAGCTGTCTTCAGACCAGAGGTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS GCA 90 bp | TCAGCTATCAGCTCCTCCTTGCTCAAGTTCTGCTTCTCCACCACCTaGAGCCCTCCATCTTGCAGGATCTTCCGGCAGCAGGGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SAISSSLLKFCFSTT*SPPSCRIFRQQGSR Trigger: CCTGGACCCCTGCTGCCGGAAGATCCTGCAAGATGGAGGGCTGCAGGTGGTGGAGAAGCAGAACTTGAGCAAGGAGGAGCTGATAGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS GCA 90 bp | TTTAGGGGAGCCAGCCCAGGCGTGCATCAGCGTGCCCATTGCTTCTaGCAGACCAATCCAAGGCTTGGTGTGTGGAGAGAAGGCACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FRGASPGVHQRAHCF*QTNPRLGVWREGTG Trigger: ACCAGTGCCTTCTCTCCACACACCAAGCCTTGGATTGGTCTGGCAGAAGCAATGGGCACGCTGATGCACGCCTGGGCTGGCTCCCCTAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CAA 90 bp | GTTGAGCGGGTTTCTTCAGAAGAGCCTGTGGGGCTGAGAGTGCTGAACCCCAGGCTGAGGCTGTTCCCGTaGGGGGTGTTCATGACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VERVSSEEPVGLRVLNPRLRLFP*GVFMTR Trigger: CCTAGTCATGAACACCCCCAACGGGAACAGCCTCAG...CCTGGGGTTCAGCACTCTCAGCCCCACAGGCTCTTCTGAAGAAACCCGCTCAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CAA 90 bp | GTTGAGCGGGTTTCTTCAGAAGAGCCTGTGGGGCTGAGAGTGCTGAACCCCAGGTGGGAGGTGGTGACATaGAGGCCAGCCTCTTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: VERVSSEEPVGLRVLNPRWEVVT*RPASFT Trigger: GGTGAAAGAGGCTGGCCTCAATGTCACCACCTCCCA...CCTGGGGTTCAGCACTCTCAGCCCCACAGGCTCTTCTGAAGAAACCCGCTCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CAA 90 bp | ACAGTTGAGCGGGTTTCTTCAGAAGAGCCTGTGGGGCTGAGAGTGCTGAACCCCCCTGGAACCCCAGGGTaGTGGGAGGTGGTGACATTG | + |
|
Preference number: 5 (lower is better) Translates to: TVERVSSEEPVGLRVLNPPGTPG*WEVVTL Trigger: CAATGTCACCACCTCCCACAACCCTGGGGTTCCAGG...GGGGTTCAGCACTCTCAGCCCCACAGGCTCTTCTGAAGAAACCCGCTCAACTGT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS TCA 90 bp | CTGCCAGACCAATCCAAGGCTTGGTGTGTGGAGAGAAGGCACTGGTaGGGGCCTGGGCGTTCACAACGCCTGTTAGAGATTTCCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPDQSKAWCVERRHW*GPGRSQRLLEISPS Trigger: TGAAGGGGAAATCTCTAACAGGCGTTGTGAACGCCCAGGCCCTCACCAGTGCCTTCTCTCCACACACCAAGCCTTGGATTGGTCTGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS GCA 90 bp | GTCCACACCTGTGCCAGCCCTGCCCACCACCTGGAGCTTCTCTGCTaGATTGATGACATCAGCAGTGACCTTAGTAGCAGACCGGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: VHTCASPAHHLELLC*IDDISSDLSSRPDN Trigger: ATTGTCCGGTCTGCTACTAAGGTCACTGCTGATGTCATCAATGCAGCAGAGAAGCTCCAGGTGGTGGGCAGGGCTGGCACAGGTGTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
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| CDS GCA 90 bp | ATTGTCCACACCTGTGCCAGCCCTGCCCACCACCTGGAGCTTCTCTaGTGCATTGATGACATCAGCAGTGACCTTAGTAGCAGACCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: IVHTCASPAHHLELL*CIDDISSDLSSRPD Trigger: GTCCGGTCTGCTACTAAGGTCACTGCTGATGTCATCAATGCAGCAGAGAAGCTCCAGGTGGTGGGCAGGGCTGGCACAGGTGTGGACAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
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| CDS GCA 90 bp | ACTGACCAGACTGCAGGGCACGCAGCAGGGCACCTTCATCCACAATaGCTCCTCGAGCACAGTTCACTACTCGCACACCTTTCTTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: TDQTAGHAAGHLHPQ*LLEHSSLLAHLSCT Trigger: AGTGCAAGAAAGGTGTGCGAGTAGTGAACTGTGCTCGAGGAGGCATTGTGGATGAAGGTGCCCTGCTGCGTGCCCTGCAGTCTGGTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CAA 90 bp | TTACTAGGTATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATGACCAAGCCCACGGCTaGGTAGGGAGCACCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLGISSGRCPGSAIPSPYDQAHG*VGSTCQ Trigger: CTGGCAGGTGCTCCCTACCAAGCCGTGGGCTTGGTC...ATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAATACCTAGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS GCA 90 bp | TCACAGTCCTGGAGTTCAGCTATCAGCTCCTCCTTGCTCAAGTTCTaGTTCTCCACCACCTGCAGCCCTCCATCTTGCAGGATCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SQSWSSAISSSLLKF*FSTTCSPPSCRIFR Trigger: CCGGAAGATCCTGCAAGATGGAGGGCTGCAGGTGGTGGAGAAGCAGAACTTGAGCAAGGAGGAGCTGATAGCTGAACTCCAGGACTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS CCA 90 bp | GTGCTGTCATTCAGCAAGCCTGTGGTAGAGGGCAGGAGTGGGGTATaGACAGTTATAAAGTCACAGAGAGGCCAGATCTCCTCCAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLSFSKPVVEGRSGV*TVIKSQRGQISSSG Trigger: GCCGCTGGAGGAGATCTGGCCTCTCTGTGACTTTATAACTGTCCATACCCCACTCCTGCCCTCTACCACAGGCTTGCTGAATGACAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CAA 90 bp | TCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTTGAGCAGACCAATCCAAGGCTaGGTGTGTGGAGAGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGRCPGSAIPSPYRSQLSRPIQG*VCGEKA Trigger: TGCCTTCTCTCCACACACCAAGCCTTGGATTGGTCT...GCTCAACTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS TCA 90 bp | ATGCCTCCTCGAGCACAGTTCACTACTCGCACACCTTTCTTGCACTaGGCAAAGGTGCTGTCATTCAGCAAGCCTGTGGTAGAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MPPRAQFTTRTPFLH*AKVLSFSKPVVEGR Trigger: CCTGCCCTCTACCACAGGCTTGCTGAATGACAGCACCTTTGCTCAGTGCAAGAAAGGTGTGCGAGTAGTGAACTGTGCTCGAGGAGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS GCA 90 bp | CACGTCTGCCTGCTTAGATGCTTCTCTCAGAAGGCCGACAATGACTaGAGGGCTCAGGCAGGTCCCAGCATTCTTCAGAGATGTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HVCLLRCFSQKADND*RAQAGPSILQRCSL Trigger: CAAGGAACATCTCTGAAGAATGCTGGGACCTGCCTGAGCCCTGCAGTCATTGTCGGCCTTCTGAGAGAAGCATCTAAGCAGGCAGACGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS CCA 90 bp | TCCAGATCCACATTGTCCACACCTGTGCCAGCCCTGCCCACCACCTaGAGCTTCTCTGCTGCATTGATGACATCAGCAGTGACCTTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SRSTLSTPVPALPTT*SFSAALMTSAVTLV Trigger: TACTAAGGTCACTGCTGATGTCATCAATGCAGCAGAGAAGCTCCAGGTGGTGGGCAGGGCTGGCACAGGTGTGGACAATGTGGATCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
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| CDS CCA 90 bp | TTCACAACGCCTGTTAGAGATTTCCCCTTCACCATGTCCACAAACTaGACTGCGATTTCCTCCCCACAGCGGCTCTGGGCTTCCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FTTPVRDFPFTMSTN*TAISSPQRLWASLV Trigger: CACCAAGGAAGCCCAGAGCCGCTGTGGGGAGGAAATCGCAGTCCAGTTTGTGGACATGGTGAAGGGGAAATCTCTAACAGGCGTTGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CAA 90 bp | TTACTAGGTATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATGCCTCCAGATCCACATaGTCCACACCTGTGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLGISSGRCPGSAIPSPYASRST*STPVPA Trigger: GGCTGGCACAGGTGTGGACAATGTGGATCTGGAGGC...ATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAATACCTAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CAA 90 bp | TTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTCTTTCATCGAAGCTGTaGCCTGGGGAATCTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVQADALVLRSPLPIGHSLSSKL*PGESAW Trigger: CCAGGCAGATTCCCCAGGCAACAGCTTCGATGAAAG...ACTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS TCA 90 bp | GCGGCAGCTGCTGAACACCAAAGGAGGCGGCGACTTCAGGAGAGATaGTGGGGTCATAGCCTACAGTCTTCATTCCAAAGGATTGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: AAAAEHQRRRRLQER*WGHSLQSSFQRIAF Trigger: GAATGCAATCCTTTGGAATGAAGACTGTAGGCTATGACCCCATCATCTCTCCTGAAGTCGCCGCCTCCTTTGGTGTTCAGCAGCTGCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS GCA 90 bp | GCCTCTTTCACCAGTAGCTTAGCGTTCACCAAGTTCACGTCTGCCTaGTTAGATGCTTCTCTCAGAAGGCCGACAATGACTGCAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASFTSSLAFTKFTSA*LDASLRRPTMTAGL Trigger: GAGCCCTGCAGTCATTGTCGGCCTTCTGAGAGAAGCATCTAAGCAGGCAGACGTGAACTTGGTGAACGCTAAGCTACTGGTGAAAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CAA 90 bp | TTACTAGGTATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATGCATCAGCGTGCCCATaGCTTCTGCCAGACCAATCC | + |
|
Preference number: 5 (lower is better) Translates to: LLGISSGRCPGSAIPSPYASACP*LLPDQS Trigger: GGATTGGTCTGGCAGAAGCAATGGGCACGCTGATGC...ATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAATACCTAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS GCA 90 bp | TCATTCCAAAGGATTGCATTCGGGTGGCCACCTCTCTTCCAATTCTaGCGAGGCCAAGAATTCCCAGTGTCTTCCCGTTCAGTTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFQRIAFGWPPLFQF*RGQEFPVSSRSVLS Trigger: GGACAGAACTGAACGGGAAGACACTGGGAATTCTTGGCCTCGGCAGAATTGGAAGAGAGGTGGCCACCCGAATGCAATCCTTTGGAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
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| CDS GCA 90 bp | CTTAGTAGCAGACCGGACAATGAGGCCTTCACAGTCAAAACTCAGTaGCCCAGTGTGCTCCGTCTTGGTGATTGGCGGTCTATCACTACN | + |
|
Preference number: 5 (lower is better) Translates to: LSSRPDNEAFTVKTQ*PSVLRLGDWRSITT Trigger: NGTAGTGATAGACCGCCAATCACCAAGACGGAGCACACTGGGGCACTGAGTTTTGACTGTGAAGGCCTCATTGTCCGGTCTGCTACTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148488.2 |
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| CDS CCA 90 bp | TGGGGTCATAGCCTACAGTCTTCATTCCAAAGGATTGCATTCGGGTaGCCACCTCTCTTCCAATTCTGCCGAGGCCAAGAATTCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: WGHSLQSSFQRIAFG*PPLFQFCRGQEFPV Trigger: CACTGGGAATTCTTGGCCTCGGCAGAATTGGAAGAGAGGTGGCCACCCGAATGCAATCCTTTGGAATGAAGACTGTAGGCTATGACCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
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| CDS-3UTR CAA 90 bp | ATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATAGGTCACAGTTCTTCCGGTCCCATTaGCCATCTTTCATCGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ISSGRCPGSAIPSPYRSQFFRSH*PSFIEA Trigger: AGCTTCGATGAAAGATGGCAAATGGGACCGGAAGAA...CTGTGACCTATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS-3UTR CAA 90 bp | TTACTAGGTATTAGTTCAGGCAGATGCCCTGGTTCTGCGATCCCCTCTCCCTATTCACTGATGAGTACTTaGCGCAGATTTGCGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLGISSGRCPGSAIPSPYSLMST*RRFAKA Trigger: GGCCTTCGCAAATCTGCGCAAAGTACTCATCAGTGA...ATAGGGAGAGGGGATCGCAGAACCAGGGCATCTGCCTGAACTAATACCTAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS GCA 72 bp | GCCCTGGACCAAGCCCACGGCTTGGTAGGGAGCACCTaGCAGGGCCACAGTCAGGAGGCATTCCCCGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: ALDQAHGLVGST*QGHSQEAFPAT Trigger: GGTAGCGGGGAATGCCTCCTGACTGTGGCCCTGGCAGGTGCTCCCTACCAAGCCGTGGGCTTGGTCCAGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS CAA 90 bp | GGTTGGCCCCTGCGTAGTGGCACCTCTGGTCTGAAGACAGCTCCGTaGAGCATCTGCAGCATTGGTGTGGTGCCCTGGACCAAGCCCACG | + |
|
Preference number: 6 (lower is better) Translates to: GWPLRSGTSGLKTAP*SICSIGVVPWTKPT Trigger: CGTGGGCTTGGTCCAGGGCACCACACCAATGCTGCAGATGCTCAACGGAGCTGTCTTCAGACCAGAGGTGCCACTACGCAGGGGCCAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS GCA 72 bp | TCGTGGCAGCCTCCAGATCCACATTGTCCACACCTGTaGCAGCCCTGCCCACCACCTGGAGCTTCTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SWQPPDPHCPHL*QPCPPPGASLL Trigger: CAGCAGAGAAGCTCCAGGTGGTGGGCAGGGCTGGCACAGGTGTGGACAATGTGGATCTGGAGGCTGCCACGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
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| CDS GCA 72 bp | AGGGGAGCCAGCCCAGGCGTGCATCAGCGTGCCCATTaGTTCTGCCAGACCAATCCAAGGCTTGGTGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RGASPGVHQRAH*FCQTNPRLGVW Trigger: CCACACACCAAGCCTTGGATTGGTCTGGCAGAAGCAATGGGCACGCTGATGCACGCCTGGGCTGGCTCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS CAA 72 bp | GACGTGCCAGGGCTCTCCGTCAGACACCATGGAGGTTaGGTAGGACAGCAGCTGTACACCCGCCTCTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DVPGLSVRHHGG*VGQQLYTRLCQ Trigger: CTGGCAGAGGCGGGTGTACAGCTGCTGTCCTACCAAACCTCCATGGTGTCTGACGGAGAGCCCTGGCACGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS GCA 72 bp | ACCTGGATGGTCCCTTTAGGGGAGCCAGCCCAGGCGTaGATCAGCGTGCCCATTGCTTCTGCCAGACCAATC | + |
|
Preference number: 6 (lower is better) Translates to: TWMVPLGEPAQA*ISVPIASARPI Trigger: GATTGGTCTGGCAGAAGCAATGGGCACGCTGATGCACGCCTGGGCTGGCTCCCCTAAAGGGACCATCCAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS GCA 72 bp | GGAGGTTTGGTAGGACAGCAGCTGTACACCCGCCTCTaGCAGGAGGCCAATCATAGTGGGCAGCATCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GGLVGQQLYTRL*QEANHSGQHPR Trigger: CCTGGGATGCTGCCCACTATGATTGGCCTCCTGGCAGAGGCGGGTGTACAGCTGCTGTCCTACCAAACCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS CAA 72 bp | CCACAGGTGAGCTCCGCAGCACTGAGGCTGTTCCCGTaGGGGGTGTTCATGACTAGGATGCCCTTCCTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PQVSSAALRLFP*GVFMTRMPFLV Trigger: CACGAGGAAGGGCATCCTAGTCATGAACACCCCCAACGGGAACAGCCTCAGTGCTGCGGAGCTCACCTGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
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| CDS TCA 72 bp | TCACAGAGAGGCCAGATCTCCTCCAGCGGCAGCTGCTaGACACCAAAGGAGGCGGCGACTTCAGGAGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: SQRGQISSSGSC*TPKEAATSGEM Trigger: CATCTCTCCTGAAGTCGCCGCCTCCTTTGGTGTTCAGCAGCTGCCGCTGGAGGAGATCTGGCCTCTCTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS GCA 72 bp | GCCAGCCCAGGCGTGCATCAGCGTGCCCATTGCTTCTaGCAGACCAATCCAAGGCTTGGTGTGTGGAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ASPGVHQRAHCF*QTNPRLGVWRE Trigger: TTCTCTCCACACACCAAGCCTTGGATTGGTCTGGCAGAAGCAATGGGCACGCTGATGCACGCCTGGGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS CAA 90 bp | CTCCTTGCTCAAGTTCTGCTTCTCCACCACCTGCAGCCCTCCATCTaGCAGGATCTTCCGGCAGCAGGGGTCCAGGCTGTCACTGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLAQVLLLHHLQPSI*QDLPAAGVQAVTDE Trigger: CTCATCAGTGACAGCCTGGACCCCTGCTGCCGGAAGATCCTGCAAGATGGAGGGCTGCAGGTGGTGGAGAAGCAGAACTTGAGCAAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS CAA 90 bp | TTCATGACTAGGATGCCCTTCCTCGTGGCAGCCTCCAGATCCACATaGTCCACACCTGTGCCAGCCCTGCCCACCACCTGGAGCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FMTRMPFLVAASRST*STPVPALPTTWSFS Trigger: AGAGAAGCTCCAGGTGGTGGGCAGGGCTGGCACAGGTGTGGACAATGTGGATCTGGAGGCTGCCACGAGGAAGGGCATCCTAGTCATGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
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| CDS GCA 72 bp | AGCTCCTCCTTGCTCAAGTTCTGCTTCTCCACCACCTaGAGCCCTCCATCTTGCAGGATCTTCCGGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSLLKFCFSTT*SPPSCRIFRQQ Trigger: CTGCTGCCGGAAGATCCTGCAAGATGGAGGGCTGCAGGTGGTGGAGAAGCAGAACTTGAGCAAGGAGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
||
| CDS GCA 72 bp | ACTGCAGGGCACGCAGCAGGGCACCTTCATCCACAATaGCTCCTCGAGCACAGTTCACTACTCGCACACCTT | + |
|
Preference number: 6 (lower is better) Translates to: TAGHAAGHLHPQ*LLEHSSLLAHL Trigger: AAGGTGTGCGAGTAGTGAACTGTGCTCGAGGAGGCATTGTGGATGAAGGTGCCCTGCTGCGTGCCCTGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS CAA 90 bp | ACACCTGTGCCAGCCCTGCCCACCACCTGGAGCTTCTCTGCTGCATaGATGACATCAGCAGTGACCTTAGTAGCAGACCGGACAATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TPVPALPTTWSFSAA*MTSAVTLVADRTMR Trigger: CCTCATTGTCCGGTCTGCTACTAAGGTCACTGCTGATGTCATCAATGCAGCAGAGAAGCTCCAGGTGGTGGGCAGGGCTGGCACAGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
||
| CDS GCA 72 bp | ACCTGTGCCAGCCCTGCCCACCACCTGGAGCTTCTCTaGTGCATTGATGACATCAGCAGTGACCTTAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: TCASPAHHLELL*CIDDISSDLSS Trigger: GCTACTAAGGTCACTGCTGATGTCATCAATGCAGCAGAGAAGCTCCAGGTGGTGGGCAGGGCTGGCACAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
||
| CDS CCA 72 bp | ACATTGTCCACACCTGTGCCAGCCCTGCCCACCACCTaGAGCTTCTCTGCTGCATTGATGACATCAGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TLSTPVPALPTT*SFSAALMTSAV Trigger: CACTGCTGATGTCATCAATGCAGCAGAGAAGCTCCAGGTGGTGGGCAGGGCTGGCACAGGTGTGGACAATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
||
| CDS TCA 72 bp | CAATCCAAGGCTTGGTGTGTGGAGAGAAGGCACTGGTaGGGGCCTGGGCGTTCACAACGCCTGTTAGAGATT | + |
|
Preference number: 6 (lower is better) Translates to: QSKAWCVERRHW*GPGRSQRLLEI Trigger: AATCTCTAACAGGCGTTGTGAACGCCCAGGCCCTCACCAGTGCCTTCTCTCCACACACCAAGCCTTGGATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
||
| CDS GCA 72 bp | AGACCGGACAATGAGGCCTTCACAGTCAAAACTCAGTaGCCCAGTGTGCTCCGTCTTGGTGATTGGCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RPDNEAFTVKTQ*PSVLRLGDWRS Trigger: AGACCGCCAATCACCAAGACGGAGCACACTGGGGCACTGAGTTTTGACTGTGAAGGCCTCATTGTCCGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148488.2 |
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| CDS CCA 72 bp | CCTGTTAGAGATTTCCCCTTCACCATGTCCACAAACTaGACTGCGATTTCCTCCCCACAGCGGCTCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PVRDFPFTMSTN*TAISSPQRLWA Trigger: AGCCCAGAGCCGCTGTGGGGAGGAAATCGCAGTCCAGTTTGTGGACATGGTGAAGGGGAAATCTCTAACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS CAA 90 bp | GTCTTCCCGTTCAGTTCTGTCCCCATGAACTTCTTCCGGTCCCATTaGCCATCTTTCATCGAAGCTGTTGCCTGGGGAATCTGCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VFPFSSVPMNFFRSH*PSFIEAVAWGICLA Trigger: GGCCAGGCAGATTCCCCAGGCAACAGCTTCGATGAAAGATGGCAAATGGGACCGGAAGAAGTTCATGGGGACAGAACTGAACGGGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
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| CDS GCA 72 bp | CTTCCGGTCCCATTTGCCATCTTTCATCGAAGCTGTTaGCTGGGGAATCTGCCTGGCCAGGCACATGATCAT | + |
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Preference number: 6 (lower is better) Translates to: LPVPFAIFHRSC*LGNLPGQAHDH Trigger: ATGATCATGTGCCTGGCCAGGCAGATTCCCCAGGCAACAGCTTCGATGAAAGATGGCAAATGGGACCGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
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| CDS GCA 72 bp | AGGATTGCATTCGGGTGGCCACCTCTCTTCCAATTCTaGCGAGGCCAAGAATTCCCAGTGTCTTCCCGTTCA | + |
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Preference number: 6 (lower is better) Translates to: RIAFGWPPLFQF*RGQEFPVSSRS Trigger: TGAACGGGAAGACACTGGGAATTCTTGGCCTCGGCAGAATTGGAAGAGAGGTGGCCACCCGAATGCAATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
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| CDS GCA 72 bp | CTGCTTAGATGCTTCTCTCAGAAGGCCGACAATGACTaGAGGGCTCAGGCAGGTCCCAGCATTCTTCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: LLRCFSQKADND*RAQAGPSILQR Trigger: TCTCTGAAGAATGCTGGGACCTGCCTGAGCCCTGCAGTCATTGTCGGCCTTCTGAGAGAAGCATCTAAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS TCA 72 bp | GCTGAACACCAAAGGAGGCGGCGACTTCAGGAGAGATaGTGGGGTCATAGCCTACAGTCTTCATTCCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: AEHQRRRRLQER*WGHSLQSSFQR Trigger: CCTTTGGAATGAAGACTGTAGGCTATGACCCCATCATCTCTCCTGAAGTCGCCGCCTCCTTTGGTGTTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS GCA 72 bp | CTCCTCGAGCACAGTTCACTACTCGCACACCTTTCTTaGACTGAGCAAAGGTGCTGTCATTCAGCAAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LLEHSSLLAHLS*TEQRCCHSASL Trigger: CAGGCTTGCTGAATGACAGCACCTTTGCTCAGTGCAAGAAAGGTGTGCGAGTAGTGAACTGTGCTCGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS GCA 72 bp | CTTAGCGTTCACCAAGTTCACGTCTGCCTGCTTAGATaGTTCTCTCAGAAGGCCGACAATGACTGCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LSVHQVHVCLLR*FSQKADNDCRA Trigger: AGCCCTGCAGTCATTGTCGGCCTTCTGAGAGAAGCATCTAAGCAGGCAGACGTGAACTTGGTGAACGCTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS CCA 72 bp | TTCAGCAAGCCTGTGGTAGAGGGCAGGAGTGGGGTATaGACAGTTATAAAGTCACAGAGAGGCCAGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: FSKPVVEGRSGV*TVIKSQRGQIS Trigger: GGAGATCTGGCCTCTCTGTGACTTTATAACTGTCCATACCCCACTCCTGCCCTCTACCACAGGCTTGCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS CCA 72 bp | GCTGTCATTCAGCAAGCCTGTGGTAGAGGGCAGGAGTaGGGTATGGACAGTTATAAAGTCACAGAGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: AVIQQACGRGQE*GMDSYKVTERP Trigger: TGGCCTCTCTGTGACTTTATAACTGTCCATACCCCACTCCTGCCCTCTACCACAGGCTTGCTGAATGACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS CAA 90 bp | AGGAGAGATGATGGGGTCATAGCCTACAGTCTTCATTCCAAAGGATaGCATTCGGGTGGCCACCTCTCTTCCAATTCTGCCGAGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: RRDDGVIAYSLHSKG*HSGGHLSSNSAEAK Trigger: CTTGGCCTCGGCAGAATTGGAAGAGAGGTGGCCACCCGAATGCAATCCTTTGGAATGAAGACTGTAGGCTATGACCCCATCATCTCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS TCA 72 bp | CGAGCACAGTTCACTACTCGCACACCTTTCTTGCACTaGGCAAAGGTGCTGTCATTCAGCAAGCCTGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: RAQFTTRTPFLH*AKVLSFSKPVV Trigger: TACCACAGGCTTGCTGAATGACAGCACCTTTGCTCAGTGCAAGAAAGGTGTGCGAGTAGTGAACTGTGCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS CCA 72 bp | AGCCTACAGTCTTCATTCCAAAGGATTGCATTCGGGTaGCCACCTCTCTTCCAATTCTGCCGAGGCCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: SLQSSFQRIAFG*PPLFQFCRGQE Trigger: TTCTTGGCCTCGGCAGAATTGGAAGAGAGGTGGCCACCCGAATGCAATCCTTTGGAATGAAGACTGTAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
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| CDS CAA 72 bp | GATGGGGTCATAGCCTACAGTCTTCATTCCAAAGGATaGCATTCGGGTGGCCACCTCTCTTCCAATTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: DGVIAYSLHSKG*HSGGHLSSNSA Trigger: GGCAGAATTGGAAGAGAGGTGGCCACCCGAATGCAATCCTTTGGAATGAAGACTGTAGGCTATGACCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
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| CDS TCA 72 bp | GAATTCCCAGTGTCTTCCCGTTCAGTTCTGTCCCCATaGACTTCTTCCGGTCCCATTTGCCATCTTTCATCG | + |
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Preference number: 6 (lower is better) Translates to: EFPVSSRSVLSP*TSSGPICHLSS Trigger: CGATGAAAGATGGCAAATGGGACCGGAAGAAGTTCATGGGGACAGAACTGAACGGGAAGACACTGGGAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
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| CDS GCA 72 bp | ACCAGTAGCTTAGCGTTCACCAAGTTCACGTCTGCCTaGTTAGATGCTTCTCTCAGAAGGCCGACAATGACT | + |
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Preference number: 6 (lower is better) Translates to: TSSLAFTKFTSA*LDASLRRPTMT Trigger: AGTCATTGTCGGCCTTCTGAGAGAAGCATCTAAGCAGGCAGACGTGAACTTGGTGAACGCTAAGCTACTGGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065793.12 |
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| CDS CAA 72 bp | TTCAGTTCTGTCCCCATGAACTTCTTCCGGTCCCATTaGCCATCTTTCATCGAAGCTGTTGCCTGGGGAATC | + |
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Preference number: 6 (lower is better) Translates to: FSSVPMNFFRSH*PSFIEAVAWGI Trigger: GATTCCCCAGGCAACAGCTTCGATGAAAGATGGCAAATGGGACCGGAAGAAGTTCATGGGGACAGAACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065793.12 ENSMUST00000148488.2 |
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