Pregenerated sensors for PHF7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021902Ensembl transcript IDs: ENSMUST00000022459.5, ENSMUST00000226310.2, ENSMUST00000226565.2, ENSMUST00000228437.2, ENSMUST00000228930.2
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCATCACAATGCCGATAGCGCTGATACAACTCGGAGAAAGCCCCTaGCTCGAGTTCCCAGGCAGCATCTCTGTCTGGGATGTGGATCCC | + |
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Preference number: 1 (lower is better) Translates to: GITMPIALIQLGESP*LEFPGSISVWDVDP Trigger: GGGATCCACATCCCAGACAGAGATGCTGCCTGGGAACTCGAGCCAGGGGCTTTCTCCGAGTTGTATCAGCGCTATCGGCATTGTGATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
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| 3UTR CCA 90 bp | TTCTTGCTGTTTGGTCTAAGAGAGGAGCAGTCCCGGTGGGTTCCATaGGATCCACACGTAGCACACAAAATGAGGCGCCACCGTCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: FLLFGLREEQSRWVP*DPHVAHKMRRHRLS Trigger: AGACAGACGGTGGCGCCTCATTTTGTGTGCTACGTGTGGATCCCATGGAACCCACCGGGACTGCTCCTCTCTTAGACCAAACAGCAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228930.2 |
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| 3UTR CCA 90 bp | TTCTTGCTGTTTGGTCTAAGAGAGGAGCAGTCCCGGTGGGTTCCATaGGATCCACACGTAGCACACAAAATGAGGCGCCACCGTCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: FLLFGLREEQSRWVP*DPHVAHKMRRHRPS Trigger: TGAAGGACGGTGGCGCCTCATTTTGTGTGCTACGTGTGGATCCCATGGAACCCACCGGGACTGCTCCTCTCTTAGACCAAACAGCAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
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| 3UTR CCA 90 bp | CATTCCCATTTCTTGCTGTTTGGTCTAAGAGAGGAGCAGTCCCGGTaGGTTCCATGGGATCCACACGTAGCACACAAAATGAGGCGCCAC | + |
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Preference number: 1 (lower is better) Translates to: HSHFLLFGLREEQSR*VPWDPHVAHKMRRH Trigger: GTGGCGCCTCATTTTGTGTGCTACGTGTGGATCCCATGGAACCCACCGGGACTGCTCCTCTCTTAGACCAAACAGCAAGAAATGGGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
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| 3UTR TCA 90 bp | ATACACATGGGGGCAGAAGGTGCTGCTGCAACAGGGGGTGTTGCCTaGGTCTTCAGATATGTAATAGCAGACCATCCTTCCAGCCTAACT | + |
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Preference number: 1 (lower is better) Translates to: IHMGAEGAAATGGVA*VFRYVIADHPSSLT Trigger: AGTTAGGCTGGAAGGATGGTCTGCTATTACATATCTGAAGACTCAGGCAACACCCCCTGTTGCAGCAGCACCTTCTGCCCCCATGTGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
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| 3UTR GCA 90 bp | AGAAATACACATGGGGGCAGAAGGTGCTGCTGCAACAGGGGGTGTTaGCTGAGTCTTCAGATATGTAATAGCAGACCATCCTTCCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: RNTHGGRRCCCNRGC*LSLQICNSRPSFQP Trigger: AGGCTGGAAGGATGGTCTGCTATTACATATCTGAAGACTCAGGCAACACCCCCTGTTGCAGCAGCACCTTCTGCCCCCATGTGTATTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
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| 3UTR TCA 90 bp | TTCAGATATGTAATAGCAGACCATCCTTCCAGCCTAACTCGTGGTTaGAGCAGGCAAACACTCATTACATTCCCATTTCTTGCTGTTTGG | + |
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Preference number: 1 (lower is better) Translates to: FRYVIADHPSSLTRG*SRQTLITFPFLAVW Trigger: CCAAACAGCAAGAAATGGGAATGTAATGAGTGTTTGCCTGCTTCAACCACGAGTTAGGCTGGAAGGATGGTCTGCTATTACATATCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAATCAGTCCAGAAGAGCTGGGATTCTCTTCCAGGCTGGTAGCCAGCCCTTAGAGGAGCAGTCCCGGTaGGTTCCATGGGATCCACAC | + |
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Preference number: 2 (lower is better) Translates to: ANQSRRAGILFQAGSQPLEEQSR*VPWDPH Trigger: GTGTGGATCCCATGGAACCCACCGGGACTGCTCCTC...TAAGGGCTGGCTACCAGCCTGGAAGAGAATCCCAGCTCTTCTGGACTGATTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
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| 3UTR CAA 90 bp | CAAAATGAGGCGCCACCGTCCTTCATCCTCAAAGCTGTCTCTGCCTaGCTCATACAGACAGATGGGGGCATCACAATGCCGATAGCGCTG | + |
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Preference number: 2 (lower is better) Translates to: QNEAPPSFILKAVSA*LIQTDGGITMPIAL Trigger: CAGCGCTATCGGCATTGTGATGCCCCCATCTGTCTGTATGAGCAAGGCAGAGACAGCTTTGAGGATGAAGGACGGTGGCGCCTCATTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGAGCTGGGATTCTCTTCCAGGCTGGTAGCCAGCCCTTAAGAAATACACATCTCGGAGAAAGCCCCTaGCTCGAGTTCCCAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RRAGILFQAGSQPLRNTHLGESP*LEFPGS Trigger: GCTGCCTGGGAACTCGAGCCAGGGGCTTTCTCCGAG...ATGTGTATTTCTTAAGGGCTGGCTACCAGCCTGGAAGAGAATCCCAGCTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAGTCCAGAAGAGCTGAGGAGCAGTCCCGGTaGGTTCCATGGGATCCACAC | + |
|
Preference number: 2 (lower is better) Translates to: RTRAFLRGKFVANQSRRAEEQSR*VPWDPH Trigger: GTGTGGATCCCATGGAACCCACCGGGACTGCTCCTC...AGCTCTTCTGGACTGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGCCCTTAAGAAATACACATGGGGGCAGAAGGTGCTGCTGCAACAGGGGGACAGGGGGTGTTGCCTaGGTCTTCAGATATGTAATA | + |
|
Preference number: 2 (lower is better) Translates to: SQPLRNTHGGRRCCCNRGTGGVA*VFRYVI Trigger: TATTACATATCTGAAGACTCAGGCAACACCCCCTGT...CCCCCTGTTGCAGCAGCACCTTCTGCCCCCATGTGTATTTCTTAAGGGCTGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAGCAACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTACAGGGGGTGTTGCCTaGGTCTTCAGATATGTAATA | + |
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Preference number: 2 (lower is better) Translates to: CSNALLYLTVLGRNRPEATGGVA*VFRYVI Trigger: TATTACATATCTGAAGACTCAGGCAACACCCCCTGT...AGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTTGCTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGATTCTCTTCCAGGCTGGTAGCCAGCCCTTAAGAAATACACATGGGGGCACAGGGGGTGTTGCCTaGGTCTTCAGATATGTAATA | + |
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Preference number: 2 (lower is better) Translates to: AGILFQAGSQPLRNTHGGTGGVA*VFRYVI Trigger: TATTACATATCTGAAGACTCAGGCAACACCCCCTGT...GCCCCCATGTGTATTTCTTAAGGGCTGGCTACCAGCCTGGAAGAGAATCCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGATTCTCTTCCAGGCTGGTAGCCAGCCCTTAAGAAATACACATGGGGGCCTCATGGTTTCAAAGTaGTACCTCTCCAAACTGATG | + |
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Preference number: 2 (lower is better) Translates to: AGILFQAGSQPLRNTHGGLMVSK*YLSKLM Trigger: CATCAGTTTGGAGAGGTAGCACTTTGAAACCATGAG...GCCCCCATGTGTATTTCTTAAGGGCTGGCTACCAGCCTGGAAGAGAATCCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAAGCTGGAGGAAGCACATGAGAGCCACATTATGGTGAACAGTGAGTGCCCTCTTAAGAAATACACATaGGGGCAGAAGGTGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: VKLEEAHESHIMVNSECPLKKYT*GQKVLL Trigger: CAGCAGCACCTTCTGCCCCCATGTGTATTTCTTAAG...AGGGCACTCACTGTTCACCATAATGTGGCTCTCATGTGCTTCCTCCAGCTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
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| 3UTR-3UTR CCA 90 bp | TCATTACATTCCCATTTCTTGCTGTTTGGTCTAAGAGAGGAGCAGTCCCGGTGGTCAGTCCAGAAGAGCTaGGATTCTCTTCCAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SLHSHFLLFGLREEQSRWSVQKS*DSLPGW Trigger: CCAGCCTGGAAGAGAATCCCAGCTCTTCTGGACTGA...CCACCGGGACTGCTCCTCTCTTAGACCAAACAGCAAGAAATGGGAATGTAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTATTACTTGGAGCTCATACAGACAGATaGGGGCATCACAATGCCGAT | + |
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Preference number: 2 (lower is better) Translates to: LFCISLSWAGTALKLLLGAHTDR*GHHNAD Trigger: ATCGGCATTGTGATGCCCCCATCTGTCTGTATGAGC...TCCAAGTAATAGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTGAGTCTCATGGTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCCTTAAGAAATACACATaGGGGCAGAAGGTGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: PLSLMVSKCYLSKLMQQRLKKYT*GQKVLL Trigger: CAGCAGCACCTTCTGCCCCCATGTGTATTTCTTAAG...GCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAACCATGAGACTCAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAACAGGGGGTGTTGCCTGAGTCTTCAGATATGTAATAGCAGACCATCCTTCAGCCTAACTCGTGGTTaGAGCAGGCAAACACTCATT | + |
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Preference number: 2 (lower is better) Translates to: CNRGCCLSLQICNSRPSFSLTRG*SRQTLI Trigger: AATGAGTGTTTGCCTGCTTCAACCACGAGTTAGGCT...GAAGGATGGTCTGCTATTACATATCTGAAGACTCAGGCAACACCCCCTGTTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR TCA 90 bp | TCATTACATTCCCATTTCTTGCTGTTTGGTCTAAGAGAGGAGCAGTCCCGGTGGAGCCTAACTCGTGGTTaGAGCAGGCAAACACTCATT | + |
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Preference number: 2 (lower is better) Translates to: SLHSHFLLFGLREEQSRWSLTRG*SRQTLI Trigger: AATGAGTGTTTGCCTGCTTCAACCACGAGTTAGGCT...CCACCGGGACTGCTCCTCTCTTAGACCAAACAGCAAGAAATGGGAATGTAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTATTACTTGGATTTAAGCTGTCTCTGCCTTaGTCATACAGACAGATGGGG | + |
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Preference number: 2 (lower is better) Translates to: FCISLSWAGTALKLLLGFKLSLP*SYRQMG Trigger: CCCCATCTGTCTGTATGAGCAAGGCAGAGACAGCTT...AAATCCAAGTAATAGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCTCATGGTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTTTCAGTCCAGAAGAGCTaGGATTCTCTTCCAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SLMVSKCYLSKLMQQRSFSVQKS*DSLPGW Trigger: CCAGCCTGGAAGAGAATCCCAGCTCTTCTGGACTGA...AAAAGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAACCATGAGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR TCA 90 bp | TCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAGTCCAGAAGAGCTGGGATACAGGGGGTGTTGCCTaGGTCTTCAGATATGTAATA | + |
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Preference number: 2 (lower is better) Translates to: SGFSKREVCSQSVQKSWDTGGVA*VFRYVI Trigger: TATTACATATCTGAAGACTCAGGCAACACCCCCTGT...ATCCCAGCTCTTCTGGACTGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR GCA 90 bp | AACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTATTACTCTCATGGTTTCAAAGTaGTACCTCTCCAAACTGATG | + |
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Preference number: 2 (lower is better) Translates to: NALLYLTVLGRNRPEAITLMVSK*YLSKLM Trigger: CATCAGTTTGGAGAGGTAGCACTTTGAAACCATGAG...AGTAATAGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTATTACTTGGATTTCTTAAGAAATACACATaGGGGCAGAAGGTGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: FCISLSWAGTALKLLLGFLKKYT*GQKVLL Trigger: CAGCAGCACCTTCTGCCCCCATGTGTATTTCTTAAG...AAATCCAAGTAATAGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCTTCCACCAGAGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCACCATTTCTTGCTGTTTaGTCTAAGAGAGGAGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: LLPPEDSGFSKREVCSQSPFLAV*SKRGAV Trigger: GACTGCTCCTCTCTTAGACCAAACAGCAAGAAATGG...TGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCTCATGGTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTTCCTCAAAGCTGTCTCTaGCTTGCTCATACAGACAGA | + |
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Preference number: 2 (lower is better) Translates to: SLMVSKCYLSKLMQQRSFPQSCL*LAHTDR Trigger: TCTGTCTGTATGAGCAAGGCAGAGACAGCTTTGAGG...AAAAGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAACCATGAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTTGTATCTCACCTTCACTTAGCCCCTTaGGTCTCATGGTTTCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: VSKCYLSKLMQQRSFVSHLHLAP*VSWFQS Trigger: ACTTTGAAACCATGAGACTCAAGGGGCTAAGTGAAG...GTGAGATACAAAAGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTTGTATCTCACCATTATGGTGAACAGTaGGTGCCCTTACATTCCACT | + |
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Preference number: 2 (lower is better) Translates to: VSKCYLSKLMQQRSFVSHHYGEQ*VPLHST Trigger: AGTGGAATGTAAGGGCACTCACTGTTCACCATAATG...GTGAGATACAAAAGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
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| 3UTR CAA 90 bp | CTTCAGATATGTAATAGCAGACCATCCTTCCAGCCTAACTCGTGGTaGAAGCAGGCAAACACTCATTACATTCCCATTTCTTGCTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: LQICNSRPSFQPNSW*KQANTHYIPISCCL Trigger: CAAACAGCAAGAAATGGGAATGTAATGAGTGTTTGCCTGCTTCAACCACGAGTTAGGCTGGAAGGATGGTCTGCTATTACATATCTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTTGTATCTCACCTCATGGTTTCAAAGTaGTACCTCTCCAAACTGATG | + |
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Preference number: 2 (lower is better) Translates to: VSKCYLSKLMQQRSFVSHLMVSK*YLSKLM Trigger: CATCAGTTTGGAGAGGTAGCACTTTGAAACCATGAG...GTGAGATACAAAAGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
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| 3UTR CCA 72 bp | ATGCCGATAGCGCTGATACAACTCGGAGAAAGCCCCTaGCTCGAGTTCCCAGGCAGCATCTCTGTCTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: MPIALIQLGESP*LEFPGSISVWD Trigger: ATCCCAGACAGAGATGCTGCCTGGGAACTCGAGCCAGGGGCTTTCTCCGAGTTGTATCAGCGCTATCGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
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| 3UTR CCA 72 bp | TTTGGTCTAAGAGAGGAGCAGTCCCGGTGGGTTCCATaGGATCCACACGTAGCACACAAAATGAGGCGCCAC | + |
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Preference number: 3 (lower is better) Translates to: FGLREEQSRWVP*DPHVAHKMRRH Trigger: GTGGCGCCTCATTTTGTGTGCTACGTGTGGATCCCATGGAACCCACCGGGACTGCTCCTCTCTTAGACCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
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| 3UTR TCA 72 bp | GGGGCAGAAGGTGCTGCTGCAACAGGGGGTGTTGCCTaGGTCTTCAGATATGTAATAGCAGACCATCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: GAEGAAATGGVA*VFRYVIADHPS Trigger: GGAAGGATGGTCTGCTATTACATATCTGAAGACTCAGGCAACACCCCCTGTTGCAGCAGCACCTTCTGCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTTTGGTCTAAGAGAGGAGCAGTCCCGGTGGGTTCCATGGGATCCACACGTAAAAGCTGTCTCTGCCTaGCTCATACAGACAGATGGG | + |
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Preference number: 3 (lower is better) Translates to: LFGLREEQSRWVPWDPHVKAVSA*LIQTDG Trigger: CCCATCTGTCTGTATGAGCAAGGCAGAGACAGCTTT...TACGTGTGGATCCCATGGAACCCACCGGGACTGCTCCTCTCTTAGACCAAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
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| 3UTR CCA 72 bp | TTCTTGCTGTTTGGTCTAAGAGAGGAGCAGTCCCGGTaGGTTCCATGGGATCCACACGTAGCACACAAAATG | + |
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Preference number: 3 (lower is better) Translates to: FLLFGLREEQSR*VPWDPHVAHKM Trigger: CATTTTGTGTGCTACGTGTGGATCCCATGGAACCCACCGGGACTGCTCCTCTCTTAGACCAAACAGCAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
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| 3UTR CCA 72 bp | CCTCAAAGCTGTCTCTGCCTTGCTCATACAGACAGATaGGGGCATCACAATGCCGATAGCGCTGATACAACT | + |
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Preference number: 3 (lower is better) Translates to: PQSCLCLAHTDR*GHHNADSADTT Trigger: AGTTGTATCAGCGCTATCGGCATTGTGATGCCCCCATCTGTCTGTATGAGCAAGGCAGAGACAGCTTTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
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| 3UTR-3UTR CAA 90 bp | GATGCAGCAACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGTTACATTCCCATTTCTaGCTGTTTGGTCTAAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: DAATLFCISLSWAGTALKLHSHF*LFGLRE Trigger: CTCTCTTAGACCAAACAGCAAGAAATGGGAATGTAA...CTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTTGCTGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
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| 3UTR-3UTR CAA 90 bp | TTGAGTCTCATGGTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTACATTCCCATTTCTaGCTGTTTGGTCTAAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: LSLMVSKCYLSKLMQQRSLHSHF*LFGLRE Trigger: CTCTCTTAGACCAAACAGCAAGAAATGGGAATGTAA...AGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAACCATGAGACTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
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| CDS-3UTR TCA 90 bp | CACCAGGACGGGCAGCTTCTTCCACCAGAGGACTCGGGCTTTTCTAAGAGGGAATTGGGTTGGCCCTTCTaGGGCAGTCTGCTAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: HQDGQLLPPEDSGFSKRELGWPF*GSLLDR Trigger: CCTGTCTAGCAGACTGCCTCAGAAGGGCCAACCCAA...TTCCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAGCTGCCCGTCCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
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| CDS-3UTR CCA 90 bp | TGCAGCAACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTGGCAGCATCTCTGTCTaGGATGTGGATCCCCATCCT | + |
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Preference number: 4 (lower is better) Translates to: CSNALLYLTVLGRNRPEAGSISV*DVDPHP Trigger: AGGATGGGGATCCACATCCCAGACAGAGATGCTGCC...AGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTTGCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022459.5 ENSMUST00000228437.2 |
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| CDS-3UTR TCA 90 bp | GTGAAGCTGGAGGAAGCACATGAGAGCCACATTATGGTGAACAGTGAGTGCCCTTTGGGTTGGCCCTTCTaGGGCAGTCTGCTAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKLEEAHESHIMVNSECPLGWPF*GSLLDR Trigger: CCTGTCTAGCAGACTGCCTCAGAAGGGCCAACCCAA...AGGGCACTCACTGTTCACCATAATGTGGCTCTCATGTGCTTCCTCCAGCTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR TCA 90 bp | CACCAGGACGGGCAGCTTCTTCCACCAGAGGACTCGGGCTTTTCTAAGAGGGAATGCACTGGGGACACTTaGAGAAGTGCTTTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HQDGQLLPPEDSGFSKRECTGDT*RSALLM Trigger: CATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCA...TTCCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAGCTGCCCGTCCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR GCA 90 bp | ATCACCAGGACGGGCAGCTTCTTCCACCAGAGGACTCGGGCTTTTCTAAGAGGGAAGCTGTCTCTGCCTTaGTCATACAGACAGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ITRTGSFFHQRTRAFLRGKLSLP*SYRQMG Trigger: CCCCATCTGTCTGTATGAGCAAGGCAGAGACAGCTT...CCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAGCTGCCCGTCCTGGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022459.5 ENSMUST00000228437.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTGATGCAGCAACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCATGGAGACCTCTGTTaGGTTGGCCCTTCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QTDAATLFCISLSWAGTAHGDLC*VGPSEA Trigger: TGCCTCAGAAGGGCCAACCCAACAGAGGTCTCCATG...GGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTTGCTGCATCAGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR TCA 90 bp | AGGTGCTGCTGCAACAGGGGGTGTTGCCTGAGTCTTCAGATATGTAATAGCAGATTGGGTTGGCCCTTCTaGGGCAGTCTGCTAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RCCCNRGCCLSLQICNSRLGWPF*GSLLDR Trigger: CCTGTCTAGCAGACTGCCTCAGAAGGGCCAACCCAA...TCTGCTATTACATATCTGAAGACTCAGGCAACACCCCCTGTTGCAGCAGCACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR TCA 90 bp | GCCAATCAGTCCAGAAGAGCTGGGATTCTCTTCCAGGCTGGTAGCCAGCCCTTATGCACTGGGGACACTTaGAGAAGTGCTTTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ANQSRRAGILFQAGSQPLCTGDT*RSALLM Trigger: CATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCA...TAAGGGCTGGCTACCAGCCTGGAAGAGAATCCCAGCTCTTCTGGACTGATTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR GCA 90 bp | ATCACCAGGACGGGCAGCTTCTTCCACCAGAGGACTCGGGCTTTTCTAAGAGGGCTTAGAAGCCCGTACTaGCTCCCTTTTGATGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ITRTGSFFHQRTRAFLRGLRSPY*LPFDVF Trigger: GAAGACATCAAAAGGGAGGCAGTACGGGCTTCTAAG...CCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAGCTGCCCGTCCTGGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR GCA 90 bp | CACGTAGCACACAAAATGAGGCGCCACCGTCTGTCTGGGATGTGGATCCCCATCCTTAGAAGCCCGTACTaGCTCCCTTTTGATGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HVAHKMRRHRLSGMWIPILRSPY*LPFDVF Trigger: GAAGACATCAAAAGGGAGGCAGTACGGGCTTCTAAG...GATGGGGATCCACATCCCAGACAGACGGTGGCGCCTCATTTTGTGTGCTACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000228930.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGCCCTTAAGAAATACACATGGGGGCAGAAGGTGCTGCTGCAACAGGGGGGGACACTTGAAGAAGTaGTTTGCTGATGTGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQPLRNTHGGRRCCCNRGGHLKK*FADVWA Trigger: TGCCCACACATCAGCAAAGCACTTCTTCAAGTGTCC...CCCCCTGTTGCAGCAGCACCTTCTGCCCCCATGTGTATTTCTTAAGGGCTGGCT 53% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATTCTCTTCCAGGCTGGTAGCCAGCCCTTAAGAAATACACATGGGGGCTCTCGGTTGTTGCACTaGGGACACTTGAAGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGILFQAGSQPLRNTHGGSRLLH*GHLKKC Trigger: GCACTTCTTCAAGTGTCCCCAGTGCAACAACCGAGA...GCCCCCATGTGTATTTCTTAAGGGCTGGCTACCAGCCTGGAAGAGAATCCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CCA 90 bp | GATGCAGCAACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGTCTCGGTTGTTGCACTaGGGACACTTGAAGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DAATLFCISLSWAGTALKSRLLH*GHLKKC Trigger: GCACTTCTTCAAGTGTCCCCAGTGCAACAACCGAGA...CTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTTGCTGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTGATGCAGCAACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCTCTCTGTCTGGGATGTaGATCCCCATCCTCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: QTDAATLFCISLSWAGTASLSGM*IPILSI Trigger: GATGCTGAGGATGGGGATCCACATCCCAGACAGAGA...GGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTTGCTGCATCAGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022459.5 ENSMUST00000228437.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTCTTCCACCAGAGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATGAGGAGCAGTCCCGGTaGGTTCCATGGGATCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SFFHQRTRAFLRGKFVANEEQSR*VPWDPH Trigger: GTGTGGATCCCATGGAACCCACCGGGACTGCTCCTC...ATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226565.2 ENSMUST00000228437.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCCTTGAGTCTCATGGTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAAGAGGAGCAGTCCCGGTaGGTTCCATGGGATCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SPLSLMVSKCYLSKLMQQEEQSR*VPWDPH Trigger: GTGTGGATCCCATGGAACCCACCGGGACTGCTCCTC...TTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAACCATGAGACTCAAGGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226565.2 ENSMUST00000228437.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAGTCCAGAAGATTGGGTTGGCCCTTCTaGGGCAGTCTGCTAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRTRAFLRGKFVANQSRRLGWPF*GSLLDR Trigger: CCTGTCTAGCAGACTGCCTCAGAAGGGCCAACCCAA...TCTTCTGGACTGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGTCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR TCA 90 bp | AACAGGGGGTGTTGCCTGAGTCTTCAGATATGTAATAGCAGACCATCCTTCCAGTTGGGTTGGCCCTTCTaGGGCAGTCTGCTAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NRGCCLSLQICNSRPSFQLGWPF*GSLLDR Trigger: CCTGTCTAGCAGACTGCCTCAGAAGGGCCAACCCAA...CTGGAAGGATGGTCTGCTATTACATATCTGAAGACTCAGGCAACACCCCCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR TCA 90 bp | CACCAGGACGGGCAGCTTCTTCCACCAGAGGACTCGGGCTTTTCTAAGAGGGAAGAAGAAGTGCTTTGCTaGTGTGTGGGCATATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HQDGQLLPPEDSGFSKREEEVLC*CVGIFL Trigger: CAGAAATATGCCCACACATCAGCAAAGCACTTCTTC...TTCCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAGCTGCCCGTCCTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR GCA 90 bp | TGCAGCAACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTCTTAGAAGCCCGTACTaGCTCCCTTTTGATGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSNALLYLTVLGRNRPEALRSPY*LPFDVF Trigger: GAAGACATCAAAAGGGAGGCAGTACGGGCTTCTAAG...AGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTTGCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR GCA 90 bp | GCCAATCAGTCCAGAAGAGCTGGGATTCTCTTCCAGGCTGGTAGCCAGCCCTTACCTCAAAGCTGTCTCTaGCTTGCTCATACAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ANQSRRAGILFQAGSQPLPQSCL*LAHTDR Trigger: TCTGTCTGTATGAGCAAGGCAGAGACAGCTTTGAGG...TAAGGGCTGGCTACCAGCCTGGAAGAGAATCCCAGCTCTTCTGGACTGATTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022459.5 ENSMUST00000228437.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGCTGCTGCAACAGGGGGTGTTGCCTGAGTCTTCAGATATGTAATAGCAGACATGGAGACCTCTGTTaGGTTGGCCCTTCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RCCCNRGCCLSLQICNSRHGDLC*VGPSEA Trigger: TGCCTCAGAAGGGCCAACCCAACAGAGGTCTCCATG...TCTGCTATTACATATCTGAAGACTCAGGCAACACCCCCTGTTGCAGCAGCACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAACTGATGCAGCAACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGTCCCCCAAACTCCCCTaGTGGATGTTCTGTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKLMQQRSFVSHCPGQEPSPKLP*WMFCVG Trigger: ACCAACACAGAACATCCACCAGGGGAGTTTGGGGGA...CGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTTGCTGCATCAGTTTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CCA 90 bp | GATGCAGCAACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGAGCTTGACTACAGCATaGGCTCTGGATGTTCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DAATLFCISLSWAGTALKSLTTA*ALDVLN Trigger: GTTGAGAACATCCAGAGCCCATGCTGTAGTCAAGCT...CTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTTGCTGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAACTGATGCAGCAACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGTCTCTGTCTGGGATGTaGATCCCCATCCTCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SKLMQQRSFVSHCPGQEPSLSGM*IPILSI Trigger: GATGCTGAGGATGGGGATCCACATCCCAGACAGAGA...CGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTTGCTGCATCAGTTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022459.5 ENSMUST00000228437.2 |
||
| CDS-3UTR CCA 90 bp | ACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAGTCCAGAAGAGCTGGGGGCAGCATCTCTGTCTaGGATGTGGATCCCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TRAFLRGKFVANQSRRAGGSISV*DVDPHP Trigger: AGGATGGGGATCCACATCCCAGACAGAGATGCTGCC...CCCAGCTCTTCTGGACTGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022459.5 ENSMUST00000228437.2 |
||
| CDS-3UTR TCA 90 bp | ATCACCAGGACGGGCAGCTTCTTCCACCAGAGGACTCGGGCTTTTCTAAGAGGGAAGTTCTGGACACACTaGTCATTCTGGCATCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: ITRTGSFFHQRTRAFLRGKFWTH*SFWHLI Trigger: TATCAGATGCCAGAATGATCAGTGTGTCCAGAACTT...CCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAGCTGCCCGTCCTGGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228930.2 |
||
| CDS-3UTR TCA 90 bp | TGGTCTAAGAGAGGAGCAGTCCCGGTGGGTTCCATGGGATCCACACGTAGCACAGAAGAAGTGCTTTGCTaGTGTGTGGGCATATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: WSKRGAVPVGSMGSTRSTEEVLC*CVGIFL Trigger: CAAAAATATGCCCACACATCAGCAAAGCACTTCTTC...TGTGCTACGTGTGGATCCCATGGAACCCACCGGGACTGCTCCTCTCTTAGACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228930.2 |
||
| CDS-3UTR TCA 90 bp | ATCACCAGGACGGGCAGCTTCTTCCACCAGAGGACTCGGGCTTTTCTAAGAGGGAAGCAGATCTGCAAATaGGATGCCAGACAAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ITRTGSFFHQRTRAFLRGKQICK*DARQSS Trigger: AGAACTTTGTCTGGCATCTCATTTGCAGATCTGCTT...CCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAGCTGCCCGTCCTGGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTGAGTCTCATGGTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCCCCAAACTCCCCTGGTaGATGTTCTGTGTTGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PLSLMVSKCYLSKLMQQRPKLPW*MFCVGR Trigger: TCGACCAACACAGAACATCCACCAGGGGAGTTTGGG...GCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAACCATGAGACTCAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CCA 90 bp | CCACACGTAGCACACAAAATGAGGCGCCACCGTCCTTCATCCTCAAAGCTGTCTAGCTTGACTACAGCATaGGCTCTGGATGTTCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PHVAHKMRRHRPSSSKLSSLTTA*ALDVLN Trigger: GTTGAGAACATCCAGAGCCCATGCTGTAGTCAAGCT...AGACAGCTTTGAGGATGAAGGACGGTGGCGCCTCATTTTGTGTGCTACGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
||
| CDS-3UTR CCA 90 bp | CATTTCTTGCTGTTTGGTCTAAGAGAGGAGCAGTCCCGGTGGGTTCCATGGGATTCTCGGTTGTTGCACTaGGGACACTTGAAGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HFLLFGLREEQSRWVPWDSRLLH*GHLKKC Trigger: GCACTTCTTCAAGTGTCCCCAGTGCAACAACCGAGA...ATCCCATGGAACCCACCGGGACTGCTCCTCTCTTAGACCAAACAGCAAGAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
||
| CDS-3UTR TCA 90 bp | TCCAAACTGATGCAGCAACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGAAGGCAAACAGGACTTaGAGACAGCTTCCTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKLMQQRSFVSHCPGQEPKANRT*RQLPLC Trigger: ACACAGAGGAAGCTGTCTTCAAGTCCTGTTTGCCTT...CGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTTGCTGCATCAGTTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR TCA 90 bp | CTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTATTACTTGGATGCACTGGGGACACTTaGAGAAGTGCTTTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LFCISLSWAGTALKLLLGCTGDT*RSALLM Trigger: CATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCA...TCCAAGTAATAGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR GCA 90 bp | ACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTATTACTTAAGCTGTCTCTGCCTTaGTCATACAGACAGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLFCISLSWAGTALKLLLKLSLP*SYRQMG Trigger: CCCCATCTGTCTGTATGAGCAAGGCAGAGACAGCTT...AAGTAATAGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022459.5 ENSMUST00000228437.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGTCTTCAGATATGTAATAGCAGACCATCCTTCCAGCCTAACTCGTGGTTGCATGGAGACCTCTGTTaGGTTGGCCCTTCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLQICNSRPSFQPNSWLHGDLC*VGPSEA Trigger: TGCCTCAGAAGGGCCAACCCAACAGAGGTCTCCATG...CAACCACGAGTTAGGCTGGAAGGATGGTCTGCTATTACATATCTGAAGACTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CCA 90 bp | TGCAACAGGGGGTGTTGCCTGAGTCTTCAGATATGTAATAGCAGACCATCCTTCCCCAAACTCCCCTGGTaGATGTTCTGTGTTGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CNRGCCLSLQICNSRPSFPKLPW*MFCVGR Trigger: TCGACCAACACAGAACATCCACCAGGGGAGTTTGGG...GAAGGATGGTCTGCTATTACATATCTGAAGACTCAGGCAACACCCCCTGTTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CCA 90 bp | AACAGGGGGTGTTGCCTGAGTCTTCAGATATGTAATAGCAGACCATCCTTCCAGTCCCCCAAACTCCCCTaGTGGATGTTCTGTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NRGCCLSLQICNSRPSFQSPKLP*WMFCVG Trigger: ACCAACACAGAACATCCACCAGGGGAGTTTGGGGGA...CTGGAAGGATGGTCTGCTATTACATATCTGAAGACTCAGGCAACACCCCCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGCTGCTGCAACAGGGGGTGTTGCCTGAGTCTTCAGATATGTAATAGCAGATCTCGGTTGTTGCACTaGGGACACTTGAAGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RCCCNRGCCLSLQICNSRSRLLH*GHLKKC Trigger: GCACTTCTTCAAGTGTCCCCAGTGCAACAACCGAGA...TCTGCTATTACATATCTGAAGACTCAGGCAACACCCCCTGTTGCAGCAGCACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CCA 90 bp | ACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAGTCCAGAAGAGCTGGGGCTCATACAGACAGATaGGGGCATCACAATGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: TRAFLRGKFVANQSRRAGAHTDR*GHHNAD Trigger: ATCGGCATTGTGATGCCCCCATCTGTCTGTATGAGC...CCCAGCTCTTCTGGACTGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022459.5 ENSMUST00000228437.2 |
||
| CDS-3UTR TCA 90 bp | CCACCAGAGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAGTCCAGGAAGAAGTGCTTTGCTaGTGTGTGGGCATATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPEDSGFSKREVCSQSVQEEVLC*CVGIFL Trigger: CAGAAATATGCCCACACATCAGCAAAGCACTTCTTC...CTGGACTGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGTCCTCTGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR TCA 90 bp | TCCAAACTGATGCAGCAACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGGAAGAAGTGCTTTGCTaGTGTGTGGGCATATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKLMQQRSFVSHCPGQEPEEVLC*CVGIFL Trigger: CAGAAATATGCCCACACATCAGCAAAGCACTTCTTC...CGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTTGCTGCATCAGTTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR TCA 90 bp | TCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAGTCCAGAAGAGCTGGGATTGCACTGGGGACACTTaGAGAAGTGCTTTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SGFSKREVCSQSVQKSWDCTGDT*RSALLM Trigger: CATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCA...ATCCCAGCTCTTCTGGACTGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR GCA 90 bp | AACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTATTACTCTTAGAAGCCCGTACTaGCTCCCTTTTGATGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NALLYLTVLGRNRPEAITLRSPY*LPFDVF Trigger: GAAGACATCAAAAGGGAGGCAGTACGGGCTTCTAAG...AGTAATAGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR GCA 90 bp | GTAGCCAATCAGTCCAGAAGAGCTGGGATTCTCTTCCAGGCTGGTAGCCAGCCCGATCTGCAAATGAGATaGCAGACAAAGTTCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VANQSRRAGILFQAGSQPDLQMR*QTKFFL Trigger: TAAGAAGAACTTTGTCTGGCATCTCATTTGCAGATC...GGGCTGGCTACCAGCCTGGAAGAGAATCCCAGCTCTTCTGGACTGATTGGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTTGTATCTCACCATGGAGACCTCTGTTaGGTTGGCCCTTCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSKCYLSKLMQQRSFVSHHGDLC*VGPSEA Trigger: TGCCTCAGAAGGGCCAACCCAACAGAGGTCTCCATG...GTGAGATACAAAAGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTTGTATCTCACTGCATGGAGACCTCTGTTaGGTTGGCCCTTCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FKVLPLQTDAATLFCISLHGDLC*VGPSEA Trigger: TGCCTCAGAAGGGCCAACCCAACAGAGGTCTCCATG...CAGTGAGATACAAAAGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CCA 90 bp | GACGGGCAGCTTCTTCCACCAGAGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTTGCTTTGCTGATGTGTaGGCATATTTCTGGATACAC | + |
|
Preference number: 4 (lower is better) Translates to: DGQLLPPEDSGFSKREVCCFADV*AYFWIH Trigger: GTGTATCCAGAAATATGCCCACACATCAGCAAAGCA...ACAAACTTCCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAGCTGCCCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTGATGCAGCAACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCTGCTTTGCTGATGTGTaGGCATATTTCTGGATACAC | + |
|
Preference number: 4 (lower is better) Translates to: QTDAATLFCISLSWAGTACFADV*AYFWIH Trigger: GTGTATCCAGAAATATGCCCACACATCAGCAAAGCA...GGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTTGCTGCATCAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CCA 90 bp | AGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAGTCCAGAAGAGCTTCTCGGTTGTTGCACTaGGGACACTTGAAGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTRAFLRGKFVANQSRRASRLLH*GHLKKC Trigger: GCACTTCTTCAAGTGTCCCCAGTGCAACAACCGAGA...AGCTCTTCTGGACTGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAGTCCAGAAGAGCTCATACAGACAGATaGGGGCATCACAATGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: QRTRAFLRGKFVANQSRRAHTDR*GHHNAD Trigger: ATCGGCATTGTGATGCCCCCATCTGTCTGTATGAGC...TCTTCTGGACTGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGTCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022459.5 ENSMUST00000228437.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCCACCAGAGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAAAGGCAAACAGGACTTaGAGACAGCTTCCTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPPEDSGFSKREVCSQSKANRT*RQLPLC Trigger: ACACAGAGGAAGCTGTCTTCAAGTCCTGTTTGCCTT...TGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR GCA 90 bp | AGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAGTCCAGAAGAGCTCCTCAAAGCTGTCTCTaGCTTGCTCATACAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RTRAFLRGKFVANQSRRAPQSCL*LAHTDR Trigger: TCTGTCTGTATGAGCAAGGCAGAGACAGCTTTGAGG...AGCTCTTCTGGACTGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022459.5 ENSMUST00000228437.2 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTTGTATCTCACTGTCCCCCAAACTCCCCTaGTGGATGTTCTGTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FKVLPLQTDAATLFCISLSPKLP*WMFCVG Trigger: ACCAACACAGAACATCCACCAGGGGAGTTTGGGGGA...CAGTGAGATACAAAAGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CCA 90 bp | AACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTATTACTCTACAGCATGGGCTCTaGATGTTCTCAACACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NALLYLTVLGRNRPEAITLQHGL*MFSTLV Trigger: AACAAGTGTTGAGAACATCCAGAGCCCATGCTGTAG...AGTAATAGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTGAGTCTCATGGTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCCTACAGCATGGGCTCTaGATGTTCTCAACACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLSLMVSKCYLSKLMQQRLQHGL*MFSTLV Trigger: AACAAGTGTTGAGAACATCCAGAGCCCATGCTGTAG...GCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAACCATGAGACTCAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CCA 90 bp | TCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAGTCCAGAAGAGCTGGGATAGCTTGACTACAGCATaGGCTCTGGATGTTCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SGFSKREVCSQSVQKSWDSLTTA*ALDVLN Trigger: GTTGAGAACATCCAGAGCCCATGCTGTAGTCAAGCT...ATCCCAGCTCTTCTGGACTGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR TCA 90 bp | TTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTATTACTTGGATTTAAGGCAAACAGGACTTaGAGACAGCTTCCTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FCISLSWAGTALKLLLGFKANRT*RQLPLC Trigger: ACACAGAGGAAGCTGTCTTCAAGTCCTGTTTGCCTT...AAATCCAAGTAATAGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR TCA 90 bp | ATATGTAATAGCAGACCATCCTTCCAGCCTAACTCGTGGTTGAAGCAGGCAAACAAGGCAAACAGGACTTaGAGACAGCTTCCTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ICNSRPSFQPNSWLKQANKANRT*RQLPLC Trigger: ACACAGAGGAAGCTGTCTTCAAGTCCTGTTTGCCTT...GTTTGCCTGCTTCAACCACGAGTTAGGCTGGAAGGATGGTCTGCTATTACATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
||
| CDS-3UTR TCA 90 bp | CTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTATTACTTGGAAAGTTCTGGACACACTaGTCATTCTGGCATCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: LFCISLSWAGTALKLLLGKFWTH*SFWHLI Trigger: TATCAGATGCCAGAATGATCAGTGTGTCCAGAACTT...TCCAAGTAATAGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228930.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTTCAGATATGTAATAGCAGACCATCCTTCCAGCCTAACTCGTGGTTGAAGTGCACTGGGGACACTTaGAGAAGTGCTTTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLQICNSRPSFQPNSWLKCTGDT*RSALLM Trigger: CATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCA...CTTCAACCACGAGTTAGGCTGGAAGGATGGTCTGCTATTACATATCTGAAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
||
| CDS-3UTR GCA 90 bp | ACACTCATTACATTCCCATTTCTTGCTGTTTGGTCTAAGAGAGGAGCAGTCCCGCTTAGAAGCCCGTACTaGCTCCCTTTTGATGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLITFPFLAVWSKRGAVPLRSPY*LPFDVF Trigger: GAAGACATCAAAAGGGAGGCAGTACGGGCTTCTAAG...CGGGACTGCTCCTCTCTTAGACCAAACAGCAAGAAATGGGAATGTAATGAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGTCTTCAGATATGTAATAGCAGACCATCCTTCCAGCCTAACTCGTGGTTGGGACACTTGAAGAAGTaGTTTGCTGATGTGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLQICNSRPSFQPNSWLGHLKK*FADVWA Trigger: TGCCCACACATCAGCAAAGCACTTCTTCAAGTGTCC...CAACCACGAGTTAGGCTGGAAGGATGGTCTGCTATTACATATCTGAAGACTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAAGCTGTCTCTGCCTTGCTCATACAGACAGATGGGGGCATCACAATGCCGGTGGATGTTCTGTGTTaGTCGATGTTTTCTACAATA | + |
|
Preference number: 4 (lower is better) Translates to: LKAVSALLIQTDGGITMPVDVLC*SMFSTI Trigger: TATTGTAGAAAACATCGACCAACACAGAACATCCAC...CGGCATTGTGATGCCCCCATCTGTCTGTATGAGCAAGGCAGAGACAGCTTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTCTTCCACCAGAGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCCATTTCTTGCTGTTTaGTCTAAGAGAGGAGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFFHQRTRAFLRGKFVANPFLAV*SKRGAV Trigger: GACTGCTCCTCTCTTAGACCAAACAGCAAGAAATGG...ATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226565.2 ENSMUST00000228437.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCCACCAGAGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAAAGTTCTGGACACACTaGTCATTCTGGCATCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: LLPPEDSGFSKREVCSQSKFWTH*SFWHLI Trigger: TATCAGATGCCAGAATGATCAGTGTGTCCAGAACTT...TGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228930.2 |
||
| CDS-3UTR TCA 90 bp | AACAGGGGGTGTTGCCTGAGTCTTCAGATATGTAATAGCAGACCATCCTTCCAGAAGTTCTGGACACACTaGTCATTCTGGCATCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: NRGCCLSLQICNSRPSFQKFWTH*SFWHLI Trigger: TATCAGATGCCAGAATGATCAGTGTGTCCAGAACTT...CTGGAAGGATGGTCTGCTATTACATATCTGAAGACTCAGGCAACACCCCCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228930.2 |
||
| CDS-3UTR GCA 90 bp | GTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTTGTATCTCACGGACACTTGAAGAAGTaGTTTGCTGATGTGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSKCYLSKLMQQRSFVSHGHLKK*FADVWA Trigger: TGCCCACACATCAGCAAAGCACTTCTTCAAGTGTCC...GTGAGATACAAAAGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR GCA 90 bp | AGTCTCATGGTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTTGGACACTTGAAGAAGTaGTTTGCTGATGTGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLMVSKCYLSKLMQQRSFGHLKK*FADVWA Trigger: TGCCCACACATCAGCAAAGCACTTCTTCAAGTGTCC...AAAAGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAACCATGAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCCACCAGAGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCATGCTTTGCTGATGTGTaGGCATATTTCTGGATACAC | + |
|
Preference number: 4 (lower is better) Translates to: LLPPEDSGFSKREVCSQSCFADV*AYFWIH Trigger: GTGTATCCAGAAATATGCCCACACATCAGCAAAGCA...TGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTATTACTTGGATTTCCATTTCTTGCTGTTTaGTCTAAGAGAGGAGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FCISLSWAGTALKLLLGFPFLAV*SKRGAV Trigger: GACTGCTCCTCTCTTAGACCAAACAGCAAGAAATGG...AAATCCAAGTAATAGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226565.2 ENSMUST00000228437.2 |
||
| CDS-3UTR TCA 90 bp | ATGGTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTTGTATCTAAGGCAAACAGGACTTaGAGACAGCTTCCTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MVSKCYLSKLMQQRSFVSKANRT*RQLPLC Trigger: ACACAGAGGAAGCTGTCTTCAAGTCCTGTTTGCCTT...AGATACAAAAGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTTGTATCTCACTGCTACAGCATGGGCTCTaGATGTTCTCAACACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FKVLPLQTDAATLFCISLLQHGL*MFSTLV Trigger: AACAAGTGTTGAGAACATCCAGAGCCCATGCTGTAG...CAGTGAGATACAAAAGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTTGTATCTCACCCATTTCTTGCTGTTTaGTCTAAGAGAGGAGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSKCYLSKLMQQRSFVSHPFLAV*SKRGAV Trigger: GACTGCTCCTCTCTTAGACCAAACAGCAAGAAATGG...GTGAGATACAAAAGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226565.2 ENSMUST00000228437.2 |
||
| CDS-3UTR CCA 90 bp | ACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTATTACTTTGCTTTGCTGATGTGTaGGCATATTTCTTCTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLFCISLSWAGTALKLLLCFADV*AYFFLE Trigger: TTCTAAGAAGAAATATGCCCACACATCAGCAAAGCA...AAGTAATAGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228437.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTATTACTTGGATTTGTGGATGTTCTGTGTTaGTCGATGTTTTCTACAATA | + |
|
Preference number: 4 (lower is better) Translates to: FCISLSWAGTALKLLLGFVDVLC*SMFSTI Trigger: TATTGTAGAAAACATCGACCAACACAGAACATCCAC...AAATCCAAGTAATAGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTCATGGTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTTGTGGATGTTCTGTGTTaGTCGATGTTTTCTACAATA | + |
|
Preference number: 4 (lower is better) Translates to: SLMVSKCYLSKLMQQRSFVDVLC*SMFSTI Trigger: TATTGTAGAAAACATCGACCAACACAGAACATCCAC...AAAAGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAACCATGAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS CCA 90 bp | CTCGGAGAAAGCCCCTGGCTCGAGTTCCCAGGCAGCATCTCTGTCTaGGATGTGGATCCCCATCCTCAGCATCTCCTGTGGGAACTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGESPWLEFPGSISV*DVDPHPQHLLWELF Trigger: GAAGAGTTCCCACAGGAGATGCTGAGGATGGGGATCCACATCCCAGACAGAGATGCTGCCTGGGAACTCGAGCCAGGGGCTTTCTCCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022459.5 ENSMUST00000228437.2 |
||
| CDS CCA 90 bp | AAAGCCCCTGGCTCGAGTTCCCAGGCAGCATCTCTGTCTGGGATGTaGATCCCCATCCTCAGCATCTCCTGTGGGAACTCTTCTCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KAPGSSSQAASLSGM*IPILSISCGNSSRL Trigger: CAACCGAGAAGAGTTCCCACAGGAGATGCTGAGGATGGGGATCCACATCCCAGACAGAGATGCTGCCTGGGAACTCGAGCCAGGGGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022459.5 ENSMUST00000228437.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAGCCCTTAAGAAATACACATGGGGGCAGAAGGTGCTGCTGCAACAGGGGGGAGACCTCTGTTGGGTaGGCCCTTCTGAGGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQPLRNTHGGRRCCCNRGETSVG*ALLRQS Trigger: AGACTGCCTCAGAAGGGCCAACCCAACAGAGGTCTC...CCCCCTGTTGCAGCAGCACCTTCTGCCCCCATGTGTATTTCTTAAGGGCTGGCT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | GTAGCCAATCAGTCCAGAAGAGCTGGGATTCTCTTCCAGGCTGGTAGCCAGCCCGAGACCTCTGTTGGGTaGGCCCTTCTGAGGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VANQSRRAGILFQAGSQPETSVG*ALLRQS Trigger: AGACTGCCTCAGAAGGGCCAACCCAACAGAGGTCTC...GGGCTGGCTACCAGCCTGGAAGAGAATCCCAGCTCTTCTGGACTGATTGGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | GCCAATCAGTCCAGAAGAGCTGGGATTCTCTTCCAGGCTGGTAGCCAGCCCTTAGCGGTGATAGATAGCTaGACTACAGCATGGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ANQSRRAGILFQAGSQPLAVIDS*TTAWAL Trigger: CAGAGCCCATGCTGTAGTCAAGCTATCTATCACCGC...TAAGGGCTGGCTACCAGCCTGGAAGAGAATCCCAGCTCTTCTGGACTGATTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS CCA 90 bp | AGCATCTCTGTCTGGGATGTGGATCCCCATCCTCAGCATCTCCTGTaGGAACTCTTCTCGGTTGTTGCACTGGGGACACTTGAAGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SISVWDVDPHPQHLL*ELFSVVALGTLEEV Trigger: CACTTCTTCAAGTGTCCCCAGTGCAACAACCGAGAAGAGTTCCCACAGGAGATGCTGAGGATGGGGATCCACATCCCAGACAGAGATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022459.5 ENSMUST00000228437.2 |
||
| CDS-3UTR CAA 90 bp | GTTTGGTCTAAGAGAGGAGCAGTCCCGGTGGGTTCCATGGGATCCACACGTAGCTTGCACTGGGGACACTaGAAGAAGTGCTTTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VWSKRGAVPVGSMGSTRSLHWGH*KKCFAD Trigger: ATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCAA...GCTACGTGTGGATCCCATGGAACCCACCGGGACTGCTCCTCTCTTAGACCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGCAACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTAAAGCTGTCTCTGCCTaGCTCATACAGACAGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: CSNALLYLTVLGRNRPEAKAVSA*LIQTDG Trigger: CCCATCTGTCTGTATGAGCAAGGCAGAGACAGCTTT...AGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTTGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022459.5 ENSMUST00000228437.2 |
||
| CDS-3UTR CAA 90 bp | CCACACGTAGCACACAAAATGAGGCGCCACCGTCCTTCATCCTCAAAGCTGTCTGAAGGCAAACAGGACTaGAAGACAGCTTCCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PHVAHKMRRHRPSSSKLSEGKQD*KTASSV Trigger: CACAGAGGAAGCTGTCTTCAAGTCCTGTTTGCCTTC...AGACAGCTTTGAGGATGAAGGACGGTGGCGCCTCATTTTGTGTGCTACGTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
||
| CDS-3UTR CAA 90 bp | TGCAACAGGGGGTGTTGCCTGAGTCTTCAGATATGTAATAGCAGACCATCCTTCGAGACCTCTGTTGGGTaGGCCCTTCTGAGGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CNRGCCLSLQICNSRPSFETSVG*ALLRQS Trigger: AGACTGCCTCAGAAGGGCCAACCCAACAGAGGTCTC...GAAGGATGGTCTGCTATTACATATCTGAAGACTCAGGCAACACCCCCTGTTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS CCA 90 bp | CCCATCCTCAGCATCTCCTGTGGGAACTCTTCTCGGTTGTTGCACTaGGGACACTTGAAGAAGTGCTTTGCTGATGTGTGGGCATATTTC | + |
|
Preference number: 5 (lower is better) Translates to: PILSISCGNSSRLLH*GHLKKCFADVWAYF Trigger: GAAATATGCCCACACATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCAACAACCGAGAAGAGTTCCCACAGGAGATGCTGAGGATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226565.2 ENSMUST00000228437.2 |
||
| CDS-3UTR CAA 90 bp | TTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTATTACTTGGATTTGAGACCTCTGTTGGGTaGGCCCTTCTGAGGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FCISLSWAGTALKLLLGFETSVG*ALLRQS Trigger: AGACTGCCTCAGAAGGGCCAACCCAACAGAGGTCTC...AAATCCAAGTAATAGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGTCTCATGGTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTGAGACCTCTGTTGGGTaGGCCCTTCTGAGGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLMVSKCYLSKLMQQRSETSVG*ALLRQS Trigger: AGACTGCCTCAGAAGGGCCAACCCAACAGAGGTCTC...AGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAACCATGAGACTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGCTGCTGCAACAGGGGGTGTTGCCTGAGTCTTCAGATATGTAATAGCAGAAAGGCAACCCCTTTCTaGGCCACAAGGCAGATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RCCCNRGCCLSLQICNSRKATPF*ATRQME Trigger: TTCCATCTGCCTTGTGGCCAAGAAAGGGGTTGCCTT...TCTGCTATTACATATCTGAAGACTCAGGCAACACCCCCTGTTGCAGCAGCACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | AACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTATTACTGCGGTGATAGATAGCTaGACTACAGCATGGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NALLYLTVLGRNRPEAITAVIDS*TTAWAL Trigger: CAGAGCCCATGCTGTAGTCAAGCTATCTATCACCGC...AGTAATAGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGCTGCTGCAACAGGGGGTGTTGCCTGAGTCTTCAGATATGTAATAGCAGAGAAGGCAAACAGGACTaGAAGACAGCTTCCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RCCCNRGCCLSLQICNSREGKQD*KTASSV Trigger: CACAGAGGAAGCTGTCTTCAAGTCCTGTTTGCCTTC...TCTGCTATTACATATCTGAAGACTCAGGCAACACCCCCTGTTGCAGCAGCACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | CAAACTGATGCAGCAACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCGTACTGCCTCCCTTTaGATGTCTTCAGGCATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QTDAATLFCISLSWAGTARTASL*MSSGIN Trigger: ATTTATGCCTGAAGACATCAAAAGGGAGGCAGTACG...GGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTTGCTGCATCAGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | AACAGGGGGTGTTGCCTGAGTCTTCAGATATGTAATAGCAGACCATCCTTCCAGAAGGCAACCCCTTTCTaGGCCACAAGGCAGATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NRGCCLSLQICNSRPSFQKATPF*ATRQME Trigger: TTCCATCTGCCTTGTGGCCAAGAAAGGGGTTGCCTT...CTGGAAGGATGGTCTGCTATTACATATCTGAAGACTCAGGCAACACCCCCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGCAACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTGGATGTTCTCAACACTaGTTCGGGATAAATTTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: CSNALLYLTVLGRNRPEAGCSQH*FGINFR Trigger: GCGAAAATTTATCCCGAACAAGTGTTGAGAACATCC...AGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTTGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CAA 90 bp | TCATTACATTCCCATTTCTTGCTGTTTGGTCTAAGAGAGGAGCAGTCCCGGTGGGCGGTGATAGATAGCTaGACTACAGCATGGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLHSHFLLFGLREEQSRWAVIDS*TTAWAL Trigger: CAGAGCCCATGCTGTAGTCAAGCTATCTATCACCGC...CCACCGGGACTGCTCCTCTCTTAGACCAAACAGCAAGAAATGGGAATGTAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
||
| CDS-3UTR CAA 90 bp | TCCAAACTGATGCAGCAACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGTTGCACTGGGGACACTaGAAGAAGTGCTTTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SKLMQQRSFVSHCPGQEPLHWGH*KKCFAD Trigger: ATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCAA...CGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTTGCTGCATCAGTTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | CCACCAGAGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAGTCCAGTTGCACTGGGGACACTaGAAGAAGTGCTTTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PPEDSGFSKREVCSQSVQLHWGH*KKCFAD Trigger: ATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCAA...CTGGACTGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGTCCTCTGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | ACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAGTCCAGAAGAGCTGGGAAAGCTGTCTCTGCCTaGCTCATACAGACAGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: TRAFLRGKFVANQSRRAGKAVSA*LIQTDG Trigger: CCCATCTGTCTGTATGAGCAAGGCAGAGACAGCTTT...CCCAGCTCTTCTGGACTGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022459.5 ENSMUST00000228437.2 |
||
| CDS-3UTR CAA 90 bp | CACCAGGACGGGCAGCTTCTTCCACCAGAGGACTCGGGCTTTTCTAAGAGGGAATTACATTCCCATTTCTaGCTGTTTGGTCTAAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HQDGQLLPPEDSGFSKRELHSHF*LFGLRE Trigger: CTCTCTTAGACCAAACAGCAAGAAATGGGAATGTAA...TTCCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAGCTGCCCGTCCTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226565.2 ENSMUST00000228437.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAGTCCAGAAGAGAAGGCAAACAGGACTaGAAGACAGCTTCCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QRTRAFLRGKFVANQSRREGKQD*KTASSV Trigger: CACAGAGGAAGCTGTCTTCAAGTCCTGTTTGCCTTC...TCTTCTGGACTGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGTCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | AGCTTCTTCCACCAGAGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATGAAGGCAAACAGGACTaGAAGACAGCTTCCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SFFHQRTRAFLRGKFVANEGKQD*KTASSV Trigger: CACAGAGGAAGCTGTCTTCAAGTCCTGTTTGCCTTC...ATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | AACAGGGGGTGTTGCCTGAGTCTTCAGATATGTAATAGCAGACCATCCTTCCAGGAAGGCAAACAGGACTaGAAGACAGCTTCCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: NRGCCLSLQICNSRPSFQEGKQD*KTASSV Trigger: CACAGAGGAAGCTGTCTTCAAGTCCTGTTTGCCTTC...CTGGAAGGATGGTCTGCTATTACATATCTGAAGACTCAGGCAACACCCCCTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | ATATGTAATAGCAGACCATCCTTCCAGCCTAACTCGTGGTTGAAGCAGGCAAACAAGGCAACCCCTTTCTaGGCCACAAGGCAGATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ICNSRPSFQPNSWLKQANKATPF*ATRQME Trigger: TTCCATCTGCCTTGTGGCCAAGAAAGGGGTTGCCTT...GTTTGCCTGCTTCAACCACGAGTTAGGCTGGAAGGATGGTCTGCTATTACATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226310.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | GCCAATCAGTCCAGAAGAGCTGGGATTCTCTTCCAGGCTGGTAGCCAGCCCTTATTACATTCCCATTTCTaGCTGTTTGGTCTAAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ANQSRRAGILFQAGSQPLLHSHF*LFGLRE Trigger: CTCTCTTAGACCAAACAGCAAGAAATGGGAATGTAA...TAAGGGCTGGCTACCAGCCTGGAAGAGAATCCCAGCTCTTCTGGACTGATTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226565.2 ENSMUST00000228437.2 |
||
| CDS GCA 90 bp | TGTGGGAACTCTTCTCGGTTGTTGCACTGGGGACACTTGAAGAAGTaGTTTGCTGATGTGTGGGCATATTTCTTCTTAGAAGCCCGTACT | + |
|
Preference number: 5 (lower is better) Translates to: CGNSSRLLHWGHLKK*FADVWAYFFLEART Trigger: AGTACGGGCTTCTAAGAAGAAATATGCCCACACATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCAACAACCGAGAAGAGTTCCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228437.2 |
||
| CDS-3UTR CAA 90 bp | CCCTTGAGTCTCATGGTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCCGTACTGCCTCCCTTTaGATGTCTTCAGGCATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PLSLMVSKCYLSKLMQQRRTASL*MSSGIN Trigger: ATTTATGCCTGAAGACATCAAAAGGGAGGCAGTACG...GCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAACCATGAGACTCAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | ACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTATTACTTCGTACTGCCTCCCTTTaGATGTCTTCAGGCATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: TLFCISLSWAGTALKLLLRTASL*MSSGIN Trigger: ATTTATGCCTGAAGACATCAAAAGGGAGGCAGTACG...AAGTAATAGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTTGTATCTCACAAGGCAACCCCTTTCTaGGCCACAAGGCAGATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VSKCYLSKLMQQRSFVSHKATPF*ATRQME Trigger: TTCCATCTGCCTTGTGGCCAAGAAAGGGGTTGCCTT...GTGAGATACAAAAGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | CTTCTTCCACCAGAGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCATTGCACTGGGGACACTaGAAGAAGTGCTTTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLPPEDSGFSKREVCSQSLHWGH*KKCFAD Trigger: ATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCAA...TGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | TCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAGTCCAGAAGAGCTGGGATCGTACTGCCTCCCTTTaGATGTCTTCAGGCATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SGFSKREVCSQSVQKSWDRTASL*MSSGIN Trigger: ATTTATGCCTGAAGACATCAAAAGGGAGGCAGTACG...ATCCCAGCTCTTCTGGACTGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | AGGACTCGGGCTTTTCTAAGAGGGAAGTTTGTAGCCAATCAGTCCAGAAGAGCTCGTACTGCCTCCCTTTaGATGTCTTCAGGCATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RTRAFLRGKFVANQSRRARTASL*MSSGIN Trigger: ATTTATGCCTGAAGACATCAAAAGGGAGGCAGTACG...AGCTCTTCTGGACTGATTGGCTACAAACTTCCCTCTTAGAAAAGCCCGAGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS-3UTR CAA 90 bp | TGCTGCAACAGGGGGTGTTGCCTGAGTCTTCAGATATGTAATAGCAGACCATCCGGATGTTCTCAACACTaGTTCGGGATAAATTTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: CCNRGCCLSLQICNSRPSGCSQH*FGINFR Trigger: GCGAAAATTTATCCCGAACAAGTGTTGAGAACATCC...GGATGGTCTGCTATTACATATCTGAAGACTCAGGCAACACCCCCTGTTGCAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGTCTCATGGTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTGCACTGGGGACACTaGAAGAAGTGCTTTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSLMVSKCYLSKLMQQRSLHWGH*KKCFAD Trigger: ATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCAA...AGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAACCATGAGACTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
||
| CDS GCA 90 bp | TCTGCAAATGAGATGCCAGACAAAGTTCTTCTTAGAAGCCCGTACTaGCTCCCTTTTGATGTCTTCAGGCATAAATCCATGGAGACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SANEMPDKVLLRSPY*LPFDVFRHKSMETS Trigger: AGAGGTCTCCATGGATTTATGCCTGAAGACATCAAAAGGGAGGCAGTACGGGCTTCTAAGAAGAACTTTGTCTGGCATCTCATTTGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
||
| CDS-3UTR CAA 90 bp | CTCATTACATTCCCATTTCTTGCTGTTTGGTCTAAGAGAGGAGCAGTCCCGGTGGGTGGATGTTCTGTGTaGGTCGATGTTTTCTACAAT | + |
|
Preference number: 5 (lower is better) Translates to: LITFPFLAVWSKRGAVPVGGCSV*VDVFYN Trigger: ATTGTAGAAAACATCGACCAACACAGAACATCCACC...CACCGGGACTGCTCCTCTCTTAGACCAAACAGCAAGAAATGGGAATGTAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGCTGGGATTCTCTTCCAGGCTGGTAGCCAGCCCTTAAGAAATACACATGGTGGATGTTCTGTGTaGGTCGATGTTTTCTACAAT | + |
|
Preference number: 5 (lower is better) Translates to: RRAGILFQAGSQPLRNTHGGCSV*VDVFYN Trigger: ATTGTAGAAAACATCGACCAACACAGAACATCCACC...ATGTGTATTTCTTAAGGGCTGGCTACCAGCCTGGAAGAGAATCCCAGCTCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCCTTGAGTCTCATGGTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAAGGATGTTCTCAACACTaGTTCGGGATAAATTTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SPLSLMVSKCYLSKLMQQGCSQH*FGINFR Trigger: GCGAAAATTTATCCCGAACAAGTGTTGAGAACATCC...TTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAACCATGAGACTCAAGGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS-3UTR CAA 90 bp | AACGCTCTTTTGTATCTCACTGTCCTGGGCAGGAACCGCCCTGAAGCTATTACTTTACATTCCCATTTCTaGCTGTTTGGTCTAAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NALLYLTVLGRNRPEAITLHSHF*LFGLRE Trigger: CTCTCTTAGACCAAACAGCAAGAAATGGGAATGTAA...AGTAATAGCTTCAGGGCGGTTCCTGCCCAGGACAGTGAGATACAAAAGAGCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226565.2 ENSMUST00000228437.2 |
||
| CDS-3UTR CAA 90 bp | AGTCTCATGGTTTCAAAGTGCTACCTCTCCAAACTGATGCAGCAACGCTCTTTTGGTGGATGTTCTGTGTaGGTCGATGTTTTCTACAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLMVSKCYLSKLMQQRSFGGCSV*VDVFYN Trigger: ATTGTAGAAAACATCGACCAACACAGAACATCCACC...AAAAGAGCGTTGCTGCATCAGTTTGGAGAGGTAGCACTTTGAAACCATGAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
||
| CDS CCA 72 bp | AGCCCCTGGCTCGAGTTCCCAGGCAGCATCTCTGTCTaGGATGTGGATCCCCATCCTCAGCATCTCCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SPWLEFPGSISV*DVDPHPQHLLW Trigger: CCACAGGAGATGCTGAGGATGGGGATCCACATCCCAGACAGAGATGCTGCCTGGGAACTCGAGCCAGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022459.5 ENSMUST00000228437.2 |
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| CDS CCA 72 bp | GGCTCGAGTTCCCAGGCAGCATCTCTGTCTGGGATGTaGATCCCCATCCTCAGCATCTCCTGTGGGAACTCT | + |
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Preference number: 6 (lower is better) Translates to: GSSSQAASLSGM*IPILSISCGNS Trigger: AGAGTTCCCACAGGAGATGCTGAGGATGGGGATCCACATCCCAGACAGAGATGCTGCCTGGGAACTCGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022459.5 ENSMUST00000228437.2 |
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| CDS CCA 72 bp | GCACACAAAATGAGGCGCCACCGTCTGTCTGGGATGTaGATCCCCATCCTCAGCATCTCCTGTGGGAACTCT | + |
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Preference number: 6 (lower is better) Translates to: AHKMRRHRLSGM*IPILSISCGNS Trigger: AGAGTTCCCACAGGAGATGCTGAGGATGGGGATCCACATCCCAGACAGACGGTGGCGCCTCATTTTGTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226565.2 |
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| CDS CAA 72 bp | GTCTTCAGGCATAAATCCATGGAGACCTCTGTTGGGTaGGCCCTTCTGAGGCAGTCTGCTAGACAGGATAAG | + |
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Preference number: 6 (lower is better) Translates to: VFRHKSMETSVG*ALLRQSARQDK Trigger: CTTATCCTGTCTAGCAGACTGCCTCAGAAGGGCCAACCCAACAGAGGTCTCCATGGATTTATGCCTGAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
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| CDS CAA 90 bp | AGCATCTCCTGTGGGAACTCTTCTCGGTTGTTGCACTGGGGACACTaGAAGAAGTGCTTTGCTGATGTGTGGGCATATTTCTGGATACAC | + |
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Preference number: 6 (lower is better) Translates to: SISCGNSSRLLHWGH*KKCFADVWAYFWIH Trigger: GTGTATCCAGAAATATGCCCACACATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCAACAACCGAGAAGAGTTCCCACAGGAGATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
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| CDS TCA 72 bp | GTGGGAACTCTTCTCGGTTGTTGCACTGGGGACACTTaGAGAAGTGCTTTGCTGATGTGTGGGCATATTTCT | + |
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Preference number: 6 (lower is better) Translates to: VGTLLGCCTGDT*RSALLMCGHIS Trigger: AGAAATATGCCCACACATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCAACAACCGAGAAGAGTTCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 |
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| CDS CAA 72 bp | TGTGGGAACTCTTCTCGGTTGTTGCACTGGGGACACTaGAAGAAGTGCTTTGCTGATGTGTGGGCATATTTC | + |
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Preference number: 6 (lower is better) Translates to: CGNSSRLLHWGH*KKCFADVWAYF Trigger: GAAATATGCCCACACATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCAACAACCGAGAAGAGTTCCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 |
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| CDS CAA 90 bp | GATGTGTGGGCATATTTCTTCTTAGAAGCCCGTACTGCCTCCCTTTaGATGTCTTCAGGCATAAATCCATGGAGACCTCTGTTGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: DVWAYFFLEARTASL*MSSGINPWRPLLGW Trigger: CCAACCCAACAGAGGTCTCCATGGATTTATGCCTGAAGACATCAAAAGGGAGGCAGTACGGGCTTCTAAGAAGAAATATGCCCACACATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228437.2 |
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| CDS CAA 90 bp | AGATGCCAGACAAAGTTCTTCTTAGAAGCCCGTACTGCCTCCCTTTaGATGTCTTCAGGCATAAATCCATGGAGACCTCTGTTGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: RCQTKFFLEARTASL*MSSGINPWRPLLGW Trigger: CCAACCCAACAGAGGTCTCCATGGATTTATGCCTGAAGACATCAAAAGGGAGGCAGTACGGGCTTCTAAGAAGAACTTTGTCTGGCATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
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| CDS CAA 90 bp | CCTTTTGATGTCTTCAGGCATAAATCCATGGAGACCTCTGTTGGGTaGGCCCTTCTGAGGCAGTCTGCTAGACAGGATAAGACAGAAATA | + |
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Preference number: 6 (lower is better) Translates to: PFDVFRHKSMETSVG*ALLRQSARQDKTEI Trigger: TATTTCTGTCTTATCCTGTCTAGCAGACTGCCTCAGAAGGGCCAACCCAACAGAGGTCTCCATGGATTTATGCCTGAAGACATCAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 ENSMUST00000228437.2 ENSMUST00000228930.2 |
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| CDS CAA 90 bp | TTGCATACAAAGCAGATCTTCTTAGAAGCCCGTACTGCCTCCCTTTaGATGTCTTCAGGCATAAATCCATGGAGACCTCTGTTGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: LHTKQIFLEARTASL*MSSGINPWRPLLGW Trigger: CCAACCCAACAGAGGTCTCCATGGATTTATGCCTGAAGACATCAAAAGGGAGGCAGTACGGGCTTCTAAGAAGATCTGCTTTGTATGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226565.2 ENSMUST00000228930.2 |
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| CDS CAA 90 bp | AGCATCTCCTGTGGGAACTCTTCTCGGTTGTTGCACTGGGGACACTaGAAGAAGTGCTTTGCTGATGTGTGGGCATATTTCTTCTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: SISCGNSSRLLHWGH*KKCFADVWAYFFLE Trigger: TTCTAAGAAGAAATATGCCCACACATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCAACAACCGAGAAGAGTTCCCACAGGAGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228437.2 |
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| CDS TCA 72 bp | GTGGGAACTCTTCTCGGTTGTTGCACTGGGGACACTTaGAGAAGTGCTTTGCTGATGTGTGGGCATATTTTT | + |
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Preference number: 6 (lower is better) Translates to: VGTLLGCCTGDT*RSALLMCGHIF Trigger: AAAAATATGCCCACACATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCAACAACCGAGAAGAGTTCCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228930.2 |
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| CDS CAA 72 bp | AAGCAGATCTTCTTAGAAGCCCGTACTGCCTCCCTTTaGATGTCTTCAGGCATAAATCCATGGAGACCTCTG | + |
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Preference number: 6 (lower is better) Translates to: KQIFLEARTASL*MSSGINPWRPL Trigger: CAGAGGTCTCCATGGATTTATGCCTGAAGACATCAAAAGGGAGGCAGTACGGGCTTCTAAGAAGATCTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226565.2 ENSMUST00000228930.2 |
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| CDS CAA 72 bp | TGTGGGAACTCTTCTCGGTTGTTGCACTGGGGACACTaGAAGAAGTGCTTTGCTGATGTGTGGGCATATTTT | + |
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Preference number: 6 (lower is better) Translates to: CGNSSRLLHWGH*KKCFADVWAYF Trigger: AAAATATGCCCACACATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCAACAACCGAGAAGAGTTCCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228930.2 |
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| CDS GCA 72 bp | TCTTCTCGGTTGTTGCACTGGGGACACTTGAAGAAGTaGTTTGCTGATGTGTGGGCATATTTTTGTACTCTC | + |
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Preference number: 6 (lower is better) Translates to: SSRLLHWGHLKK*FADVWAYFCTL Trigger: GAGAGTACAAAAATATGCCCACACATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCAACAACCGAGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228930.2 |
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| CDS GCA 72 bp | GAGATGCCAGACAAAGTTCTTCTTAGAAGCCCGTACTaGCTCCCTTTTGATGTCTTCAGGCATAAATCCATG | + |
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Preference number: 6 (lower is better) Translates to: EMPDKVLLRSPY*LPFDVFRHKSM Trigger: CATGGATTTATGCCTGAAGACATCAAAAGGGAGGCAGTACGGGCTTCTAAGAAGAACTTTGTCTGGCATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226310.2 |
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| CDS CAA 72 bp | CTTGACTACAGCATGGGCTCTGGATGTTCTCAACACTaGTTCGGGATAAATTTTCGCAACACAAGACACAGC | + |
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Preference number: 6 (lower is better) Translates to: LDYSMGSGCSQH*FGINFRNTRHS Trigger: GCTGTGTCTTGTGTTGCGAAAATTTATCCCGAACAAGTGTTGAGAACATCCAGAGCCCATGCTGTAGTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226310.2 ENSMUST00000226565.2 |
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| CDS CAA 72 bp | GCATATTTCTTCTTAGAAGCCCGTACTGCCTCCCTTTaGATGTCTTCAGGCATAAATCCATGGAGACCTCTG | + |
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Preference number: 6 (lower is better) Translates to: AYFFLEARTASL*MSSGINPWRPL Trigger: CAGAGGTCTCCATGGATTTATGCCTGAAGACATCAAAAGGGAGGCAGTACGGGCTTCTAAGAAGAAATATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228437.2 |
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| CDS GCA 72 bp | CTTGCATACAAAGCAGATCTTCTTAGAAGCCCGTACTaGCTCCCTTTTGATGTCTTCAGGCATAAATCCATG | + |
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Preference number: 6 (lower is better) Translates to: LAYKADLLRSPY*LPFDVFRHKSM Trigger: CATGGATTTATGCCTGAAGACATCAAAAGGGAGGCAGTACGGGCTTCTAAGAAGATCTGCTTTGTATGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022459.5 ENSMUST00000226565.2 ENSMUST00000228930.2 |
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| CDS GCA 72 bp | TCTTCTCGGTTGTTGCACTGGGGACACTTGAAGAAGTaGTTTGCTGATGTGTGGGCATATTTCTTCTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: SSRLLHWGHLKK*FADVWAYFFLE Trigger: TTCTAAGAAGAAATATGCCCACACATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCAACAACCGAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228437.2 |
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