Pregenerated sensors for PHF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025626Ensembl transcript IDs: ENSMUST00000078944.13, ENSMUST00000101587.10, ENSMUST00000154864.4
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGGAGCTCAGAGCTTATCATCACCAGTCGCCCAGAGTCCATGCTaGTCAGTGAGAATAACTCTAAAAAGGACCACAGGTAGGCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: TGAQSLSSPVAQSPC*SVRITLKRTTGRLQ Trigger: CTGAAGCCTACCTGTGGTCCTTTTTAGAGTTATTCTCACTGAGCAGCATGGACTCTGGGCGACTGGTGATGATAAGCTCTGAGCTCCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR GCA 90 bp | GTTTCCATTGCCCAAATTGCCAGGTGTTGCTACCAGAGGCATGTTTaGAAGGTGGAGTACAACTTGCTTCTGGTTTCCTTTGAGCGTGGA | + |
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Preference number: 1 (lower is better) Translates to: VSIAQIARCCYQRHV*KVEYNLLLVSFERG Trigger: TCCACGCTCAAAGGAAACCAGAAGCAAGTTGTACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGGCAATTTGGGCAATGGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR CCA 90 bp | TTGCCCAAATTGCCAGGTGTTGCTACCAGAGGCATGTTTGCAAGGTaGAGTACAACTTGCTTCTGGTTTCCTTTGAGCGTGGATCTACTA | + |
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Preference number: 1 (lower is better) Translates to: LPKLPGVATRGMFAR*STTCFWFPLSVDLL Trigger: TAGTAGATCCACGCTCAAAGGAAACCAGAAGCAAGTTGTACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGGCAATTTGGGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR GCA 90 bp | CCAGGTGTTGCTACCAGAGGCATGTTTGCAAGGTGGAGTACAACTTaGTTCTGGTTTCCTTTGAGCGTGGATCTACTACACAAACTTACA | + |
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Preference number: 1 (lower is better) Translates to: PGVATRGMFARWSTT*FWFPLSVDLLHKLT Trigger: TGTAAGTTTGTGTAGTAGATCCACGCTCAAAGGAAACCAGAAGCAAGTTGTACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR GCA 90 bp | AGAGTCTCTTCATTTGTCGTTTCCATTGCCCAAATTGCCAGGTGTTaGTACCAGAGGCATGTTTGCAAGGTGGAGTACAACTTGCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: RVSSFVVSIAQIARC*YQRHVCKVEYNLLL Trigger: CAGAAGCAAGTTGTACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGGCAATTTGGGCAATGGAAACGACAAATGAAGAGACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR TCA 90 bp | AAGAAGAATGAACAGGCTGTTGACAGTAGTCCAGGTGAGAACTGTTaGGACTTTAGACTAGTGTGCAGTTGTGAAGGTAGACGCCAAAGT | + |
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Preference number: 1 (lower is better) Translates to: KKNEQAVDSSPGENC*DFRLVCSCEGRRQS Trigger: ACTTTGGCGTCTACCTTCACAACTGCACACTAGTCTAAAGTCTCAACAGTTCTCACCTGGACTACTGTCAACAGCCTGTTCATTCTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
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| 3UTR GCA 90 bp | GACAAAAAGAAGAGTCTCTTCATTTGTCGTTTCCATTGCCCAAATTaGCAGGTGTTGCTACCAGAGGCATGTTTGCAAGGTGGAGTACAA | + |
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Preference number: 1 (lower is better) Translates to: DKKKSLFICRFHCPN*QVLLPEACLQGGVQ Trigger: TTGTACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGGCAATTTGGGCAATGGAAACGACAAATGAAGAGACTCTTCTTTTTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR CCA 90 bp | GTTGCTACCAGAGGCATGTTTGCAAGGTGGAGTACAACTTGCTTCTaGTTTCCTTTGAGCGTGGATCTACTACACAAACTTACATACTCT | + |
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Preference number: 1 (lower is better) Translates to: VATRGMFARWSTTCF*FPLSVDLLHKLTYS Trigger: AGAGTATGTAAGTTTGTGTAGTAGATCCACGCTCAAAGGAAACCAGAAGCAAGTTGTACTCCACCTTGCAAACATGCCTCTGGTAGCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR TCA 90 bp | GAGGCATGTTTGCAAGGTGGAGTACAACTTGCTTCTGGTTTCCTTTaGGCGTGGATCTACTACACAAACTTACATACTCTAAACAGTACA | + |
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Preference number: 1 (lower is better) Translates to: EACLQGGVQLASGFL*AWIYYTNLHTLNST Trigger: TGTACTGTTTAGAGTATGTAAGTTTGTGTAGTAGATCCACGCTCAAAGGAAACCAGAAGCAAGTTGTACTCCACCTTGCAAACATGCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR TCA 90 bp | AGAATAACTCTAAAAAGGACCACAGGTAGGCTTCAGCACGCTTCGTaGAAGAAATGGTTAGAGCATGTGCTGTCAAAGCCAAGACAAAAA | + |
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Preference number: 1 (lower is better) Translates to: RITLKRTTGRLQHAS*KKWLEHVLSKPRQK Trigger: TTTTTGTCTTGGCTTTGACAGCACATGCTCTAACCATTTCTTTCACGAAGCGTGCTGAAGCCTACCTGTGGTCCTTTTTAGAGTTATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR TCA 90 bp | CCTGAATTTCCGAATACATTCTGTCTCCCTCTCTTATGTGAGGCGTaGAAGCAAAACTTACATACAACAAACACACACCCTAATCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: PEFPNTFCLPLLCEA*KQNLHTTNTHPNLR Trigger: CCTCAGATTAGGGTGTGTGTTTGTTGTATGTAAGTTTTGCTTTCACGCCTCACATAAGAGAGGGAGACAGAATGTATTCGGAAATTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
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| 3UTR CCA 90 bp | GCTTCAGCAGGTAAGTGGATGTGTGTCACGAGTGAGAAATGCCAGTaGAAAGAAAGCCTTTCTAAAAATCTGGTGATTGAGAAAACACTT | + |
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Preference number: 1 (lower is better) Translates to: ASAGKWMCVTSEKCQ*KESLSKNLVIEKTL Trigger: AAGTGTTTTCTCAATCACCAGATTTTTAGAAAGGCTTTCTTTCCACTGGCATTTCTCACTCGTGACACACATCCACTTACCTGCTGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR GCA 90 bp | AAATGTGCTTCAGCAGGTAAGTGGATGTGTGTCACGAGTGAGAAATaGCAGTGGAAAGAAAGCCTTTCTAAAAATCTGGTGATTGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: KCASAGKWMCVTSEK*QWKESLSKNLVIEK Trigger: TTTCTCAATCACCAGATTTTTAGAAAGGCTTTCTTTCCACTGGCATTTCTCACTCGTGACACACATCCACTTACCTGCTGAAGCACATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR TCA 90 bp | ACTCAAAGTTATAAACTGTCCTTTCACCATTTACCTGGGAGGTGGTaGCATGGTTTTTCTTTACCAATTTACAATAGATCACATGAACAC | + |
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Preference number: 1 (lower is better) Translates to: TQSYKLSFHHLPGRW*HGFSLPIYNRSHEH Trigger: GTGTTCATGTGATCTATTGTAAATTGGTAAAGAAAAACCATGTCACCACCTCCCAGGTAAATGGTGAAAGGACAGTTTATAACTTTGAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
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| 3UTR CCA 90 bp | CACCTGTTACATTTCAAAACGCTGTTCTACCAGCTACAGAATAGATaGATGTACAGTCAAGTTAGTACGTTATTTCTTATTTGCAAATCT | + |
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Preference number: 1 (lower is better) Translates to: HLLHFKTLFYQLQNR*MYSQVSTLFLICKS Trigger: AGATTTGCAAATAAGAAATAACGTACTAACTTGACTGTACATCCATCTATTCTGTAGCTGGTAGAACAGCGTTTTGAAATGTAACAGGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR TCA 90 bp | TCTAAGTCTGGTGATTCTGAGGCCCAACCCTGGGTTAGGGCTATTGCTTTTACTGGTGGAAGATGTGTGTaGGCTAGAGGCCAGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: SKSGDSEAQPWVRAIAFTGGRCV*ARGQWG Trigger: CCCCCACTGGCCTCTAGCTCACACACATCTTCCACC...AGTAAAAGCAATAGCCCTAACCCAGGGTTGGGCCTCAGAATCACCAGACTTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
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| 3UTR CAA 90 bp | CCAGAAGCTCTCTGTACAGCACAGAAAGGTGTACTGTCCAGAGTTTaGGCAGAAGCACTGGAGCTCAGAGCTTATCATCACCAGTCGCCC | + |
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Preference number: 2 (lower is better) Translates to: PEALCTAQKGVLSRV*AEALELRAYHHQSP Trigger: GGGCGACTGGTGATGATAAGCTCTGAGCTCCAGTGCTTCTGCCAAAACTCTGGACAGTACACCTTTCTGTGCTGTACAGAGAGCTTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR TCA 90 bp | AAGTTCAGAGATTCCTATCCAATTACTCTGCATGATGGAAATAATGGAGCCACTAGCAGGGGCTGTCCCTaGACCTGTTGCTGGCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: KFRDSYPITLHDGNNGATSRGCP*TCCWPA Trigger: GGCAGGCCAGCAACAGGTTCAGGGACAGCCCCTGCT...AGTGGCTCCATTATTTCCATCATGCAGAGTAATTGGATAGGAATCTCTGAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
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| 3UTR-3UTR GCA 90 bp | GGGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTGGTTTCGTCGCCCAGAGTCCATaGTGCTCAGTGAGAATAACT | + |
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Preference number: 2 (lower is better) Translates to: GPICEVFHTTGHLREAGFVAQSP*CSVRIT Trigger: AGTTATTCTCACTGAGCAGCATGGACTCTGGGCGAC...GAAACCAGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR TCA 90 bp | ATTGCCCAAATTGCCAGGTGTTGCTACCAGAGGCATGTTTGCAAGGTGGAGTACGGGCTAATAGTGTTTTaGCTGCTTCCCAGAAACTGC | + |
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Preference number: 2 (lower is better) Translates to: IAQIARCCYQRHVCKVEYGLIVF*LLPRNC Trigger: GCAGTTTCTGGGAAGCAGTCAAAACACTATTAGCCC...GTACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGGCAATTTGGGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR TCA 90 bp | GGGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTGGTTTCGGGCTAATAGTGTTTTaGCTGCTTCCCAGAAACTGC | + |
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Preference number: 2 (lower is better) Translates to: GPICEVFHTTGHLREAGFGLIVF*LLPRNC Trigger: GCAGTTTCTGGGAAGCAGTCAAAACACTATTAGCCC...GAAACCAGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR TCA 90 bp | GTTCTGTTAGGGATGAACATGGGAATTGCCTCAAGTTTGACCCTCTTTGCAAACAGCTTGGTCTTCACGTaGGTCCCCCAACAACTGGAG | + |
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Preference number: 2 (lower is better) Translates to: VLLGMNMGIASSLTLFANSLVFT*VPQQLE Trigger: CTCCAGTTGTTGGGGGACTCACGTGAAGACCAAGCT...GTTTGCAAAGAGGGTCAAACTTGAGGCAATTCCCATGTTCATCCCTAACAGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
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| 3UTR-3UTR TCA 90 bp | GTTCTGTTAGGGATGAACATGGGAATTGCCTCAAGTTTGACCCTCTTTGCAAACGGACAGTCTTGTGAATaGGCAGCTCCAGTCCACTGC | + |
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Preference number: 2 (lower is better) Translates to: VLLGMNMGIASSLTLFANGQSCE*AAPVHC Trigger: GCAGTGGACTGGAGCTGCTCATTCACAAGACTGTCC...GTTTGCAAAGAGGGTCAAACTTGAGGCAATTCCCATGTTCATCCCTAACAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
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| 3UTR-3UTR GCA 90 bp | GTTCTGTTAGGGATGAACATGGGAATTGCCTCAAGTTTGACCCTCTTTGCAAACCACAGCGACTTGATATaGAGGGTGGGGGTGAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: VLLGMNMGIASSLTLFANHSDLI*RVGVKG Trigger: ACCCTTCACCCCCACCCTGCATATCAAGTCGCTGTG...GTTTGCAAAGAGGGTCAAACTTGAGGCAATTCCCATGTTCATCCCTAACAGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
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| 3UTR CAA 90 bp | GCCAGGTGTTGCTACCAGAGGCATGTTTGCAAGGTGGAGTACAACTaGCTTCTGGTTTCCTTTGAGCGTGGATCTACTACACAAACTTAC | + |
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Preference number: 2 (lower is better) Translates to: ARCCYQRHVCKVEYN*LLVSFERGSTTQTY Trigger: GTAAGTTTGTGTAGTAGATCCACGCTCAAAGGAAACCAGAAGCAAGTTGTACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGCAGGTAAGTGGATGTGTGTCACGAGTGAGAAATGCCAGTGGAAAGAAATGCTGGGCCAATATGTaGAGTGTTCCACACAACAGG | + |
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Preference number: 2 (lower is better) Translates to: LQQVSGCVSRVRNASGKKCWANM*SVPHNR Trigger: CCTGTTGTGTGGAACACTTCACATATTGGCCCAGCA...TTTCTTTCCACTGGCATTTCTCACTCGTGACACACATCCACTTACCTGCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGCAGGTAAGTGGATGTGTGTCACGAGTGAGAAATGCCAGTGGAAAGAAAGTCGCCCAGAGTCCATaGTGCTCAGTGAGAATAACT | + |
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Preference number: 2 (lower is better) Translates to: LQQVSGCVSRVRNASGKKVAQSP*CSVRIT Trigger: AGTTATTCTCACTGAGCAGCATGGACTCTGGGCGAC...TTTCTTTCCACTGGCATTTCTCACTCGTGACACACATCCACTTACCTGCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR CCA 90 bp | TATGCTGGGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTGGCATGTTTGCAAGGTaGAGTACAACTTGCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: YAGPICEVFHTTGHLREAGMFAR*STTCFW Trigger: CCAGAAGCAAGTTGTACTCCACCTTGCAAACATGCC...AGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCCAGCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR GCA 90 bp | CATTGCCCAAATTGCCAGGTGTTGCTACCAGAGGCATGTTTGCAAGGTGGAGTACTGCTTCCCAGAAACTaGAAACTACAGCTACGTAAT | + |
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Preference number: 2 (lower is better) Translates to: HCPNCQVLLPEACLQGGVLLPRN*KLQLRN Trigger: ATTACGTAGCTGTAGTTTGCAGTTTCTGGGAAGCAG...TACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGGCAATTTGGGCAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR GCA 90 bp | TATGCTGGGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTTACCAGAGGCATGTTTaGAAGGTGGAGTACAACTTG | + |
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Preference number: 2 (lower is better) Translates to: YAGPICEVFHTTGHLREAYQRHV*KVEYNL Trigger: CAAGTTGTACTCCACCTTGCAAACATGCCTCTGGTA...AGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCCAGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGCAGGTAAGTGGATGTGTGTCACGAGTGAGAAATGCCAGTGGAAAGAAAGCCCAGAGTCCATGCTaGTCAGTGAGAATAACTCTA | + |
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Preference number: 2 (lower is better) Translates to: LQQVSGCVSRVRNASGKKAQSPC*SVRITL Trigger: TAGAGTTATTCTCACTGAGCAGCATGGACTCTGGGC...TTTCTTTCCACTGGCATTTCTCACTCGTGACACACATCCACTTACCTGCTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR CAA 90 bp | AAGAGTCTCTTCATTTGTCGTTTCCATTGCCCAAATTGCCAGGTGTaGCTACCAGAGGCATGTTTGCAAGGTGGAGTACAACTTGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: KSLFICRFHCPNCQV*LPEACLQGGVQLAS Trigger: AGAAGCAAGTTGTACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGGCAATTTGGGCAATGGAAACGACAAATGAAGAGACTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR CAA 90 bp | AGACAAAAAGAAGAGTCTCTTCATTTGTCGTTTCCATTGCCCAAATaGCCAGGTGTTGCTACCAGAGGCATGTTTGCAAGGTGGAGTACA | + |
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Preference number: 2 (lower is better) Translates to: RQKEESLHLSFPLPK*PGVATRGMFARWST Trigger: TGTACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGGCAATTTGGGCAATGGAAACGACAAATGAAGAGACTCTTCTTTTTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR TCA 90 bp | ATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTGGTTTCAGACATAATTCGGCCGTCTACTaGAGGCTCAGAAAACTAACA | + |
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Preference number: 2 (lower is better) Translates to: ICEVFHTTGHLREAGFRHNSAVY*RLRKLT Trigger: TGTTAGTTTTCTGAGCCTTCAGTAGACGGCCGAATT...ATGTCTGAAACCAGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR GCA 90 bp | TATGCTGGGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTACGATTCCATTATTTTaGCAGAAGCTCTCTGTACAG | + |
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Preference number: 2 (lower is better) Translates to: YAGPICEVFHTTGHLREATIPLF*QKLSVQ Trigger: CTGTACAGAGAGCTTCTGGCAAAATAATGGAATCGT...AGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCCAGCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR CCA 90 bp | CTTCAGCAGGTAAGTGGATGTGTGTCACGAGTGAGAAATGCCAGTGGAAAGAAAAGTACAACTTGCTTCTaGTTTCCTTTGAGCGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: LQQVSGCVSRVRNASGKKSTTCF*FPLSVD Trigger: ATCCACGCTCAAAGGAAACCAGAAGCAAGTTGTACT...TTTCTTTCCACTGGCATTTCTCACTCGTGACACACATCCACTTACCTGCTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR CCA 90 bp | ATCACATACACATCATGGCATATTAAGAGCGAAAGGAGAAGACGCACAAGGCAATACTGTCCAGAGTTTTaGCAGAAGCACTGGAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: ITYTSWHIKSERRRRTRQYCPEF*QKHWSS Trigger: TGAGCTCCAGTGCTTCTGCCAAAACTCTGGACAGTA...TTGCCTTGTGCGTCTTCTCCTTTCGCTCTTAATATGCCATGATGTGTATGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR CCA 90 bp | TTAGGGATGAACATGGGAATTGCCTCAAGTTTGACCCTCTTTGCAAACCTACTGCTTTCACCATTTACCTaGGAGGTGGTGACATGGTTT | + |
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Preference number: 2 (lower is better) Translates to: LGMNMGIASSLTLFANLLLSPFT*EVVTWF Trigger: AAACCATGTCACCACCTCCCAGGTAAATGGTGAAAG...CAGTAGGTTTGCAAAGAGGGTCAAACTTGAGGCAATTCCCATGTTCATCCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
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| 3UTR-3UTR TCA 90 bp | TATCTGTTGCTTAAAGGCCTGATAGCATTAGAATGCTTCTGTGGGCACCCAAAGGATATAACTTGTAACTaGGCACTGATTTGTCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: YLLLKGLIALECFCGHPKDITCN*ALICLA Trigger: GGCCAGACAAATCAGTGCTCAGTTACAAGTTATATC...CTTTGGGTGCCCACAGAAGCATTCTAATGCTATCAGGCCTTTAAGCAACAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
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| 3UTR-3UTR CCA 90 bp | GCACGCTTCGTGAAAGAAATGGTTAGAGCATGTGCTGTCAAAGCCAAGACAAAAAGTACAACTTGCTTCTaGTTTCCTTTGAGCGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: ARFVKEMVRACAVKAKTKSTTCF*FPLSVD Trigger: ATCCACGCTCAAAGGAAACCAGAAGCAAGTTGTACT...TTTTGTCTTGGCTTTGACAGCACATGCTCTAACCATTTCTTTCACGAAGCGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR CCA 90 bp | AAAGTACAGATCCTTTGGGAAAAGTCGCATCGCTTGGTAAACAAACTGAGATCTGGCATGTTTGCAAGGTaGAGTACAACTTGCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: KVQILWEKSHRLVNKLRSGMFAR*STTCFW Trigger: CCAGAAGCAAGTTGTACTCCACCTTGCAAACATGCC...AGATCTCAGTTTGTTTACCAAGCGATGCGACTTTTCCCAAAGGATCTGTACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR CAA 90 bp | AGAGGCATGTTTGCAAGGTGGAGTACAACTTGCTTCTGGTTTCCTTaGAGCGTGGATCTACTACACAAACTTACATACTCTAAACAGTAC | + |
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Preference number: 2 (lower is better) Translates to: RGMFARWSTTCFWFP*SVDLLHKLTYSKQY Trigger: GTACTGTTTAGAGTATGTAAGTTTGTGTAGTAGATCCACGCTCAAAGGAAACCAGAAGCAAGTTGTACTCCACCTTGCAAACATGCCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
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| 3UTR-3UTR GCA 90 bp | CTGCATGATGGAAATAATGGAGCCACTATAGATACACAGGTAAGTAGAAATCCCGGTACTTATCTGTTATaGACACACCAGGACACCTGT | + |
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Preference number: 2 (lower is better) Translates to: LHDGNNGATIDTQVSRNPGTYLL*THQDTC Trigger: ACAGGTGTCCTGGTGTGTGCATAACAGATAAGTACC...GGGATTTCTACTTACCTGTGTATCTATAGTGGCTCCATTATTTCCATCATGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCCTTTATGTCTCAGCTCAAACTCCTAAGAGCAAACTCAAACACTTCTTATGGCCTGCCTGTCTATaGATCTCATCCGTAAATGGA | + |
|
Preference number: 2 (lower is better) Translates to: FALYVSAQTPKSKLKHFLWPACL*ISSVNG Trigger: TCCATTTACGGATGAGATCCATAGACAGGCAGGCCA...TAAGAAGTGTTTGAGTTTGCTCTTAGGAGTTTGAGCTGAGACATAAAGGGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| 3UTR-3UTR TCA 90 bp | ATCAAGTTCAGAGATTCCTATCCAATTACTCTGCATGATGGAAATAATGGAGCCGTGGGGGCTACACACTaGGACCTTGTCTTAATAAAA | + |
|
Preference number: 2 (lower is better) Translates to: IKFRDSYPITLHDGNNGAVGATH*DLVLIK Trigger: TTTTATTAAGACAAGGTCTCAGTGTGTAGCCCCCAC...GGCTCCATTATTTCCATCATGCAGAGTAATTGGATAGGAATCTCTGAACTTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| 3UTR-3UTR GCA 90 bp | TTTGCAAATCTGATTCACTATGGGAGGTTAACTAATGATGTGGAACTCAGAATCGCCCAGAGTCCATGCTaGTCAGTGAGAATAACTCTA | + |
|
Preference number: 2 (lower is better) Translates to: FANLIHYGRLTNDVELRIAQSPC*SVRITL Trigger: TAGAGTTATTCTCACTGAGCAGCATGGACTCTGGGC...GATTCTGAGTTCCACATCATTAGTTAACCTCCCATAGTGAATCAGATTTGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR-3UTR GCA 90 bp | TATCTGTTGCTTAAAGGCCTGATAGCATTAGAATGCTTCTGTGGGCACCCAAAGCCTATCCAATTACTCTaGATGATGGAAATAATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: YLLLKGLIALECFCGHPKPIQLL*MMEIME Trigger: CTCCATTATTTCCATCATGCAGAGTAATTGGATAGG...CTTTGGGTGCCCACAGAAGCATTCTAATGCTATCAGGCCTTTAAGCAACAGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| 3UTR-3UTR TCA 90 bp | TTTGCCCTTTATGTCTCAGCTCAAACTCCTAAGAGCAAACTCAAACACTTCTTAAGGGCACTAACTTACTaGCATGTTAAGGAAAATGGA | + |
|
Preference number: 2 (lower is better) Translates to: FALYVSAQTPKSKLKHFLRALTY*HVKENG Trigger: TCCATTTTCCTTAACATGTCAGTAAGTTAGTGCCCT...TAAGAAGTGTTTGAGTTTGCTCTTAGGAGTTTGAGCTGAGACATAAAGGGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| 3UTR-3UTR GCA 90 bp | AAATTAATCACATACACATCATGGCATATTAAGAGCGAAAGGAGAAGACGCACACTGCTTCCCAGAAACTaGAAACTACAGCTACGTAAT | + |
|
Preference number: 2 (lower is better) Translates to: KLITYTSWHIKSERRRRTLLPRN*KLQLRN Trigger: ATTACGTAGCTGTAGTTTGCAGTTTCTGGGAAGCAG...TGTGCGTCTTCTCCTTTCGCTCTTAATATGCCATGATGTGTATGTGATTAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR-3UTR GCA 90 bp | CTCAAAGTTATAAACTGTCCTTTCACCATTTACCTGGGAGGTGGTGACATGGTTGACTTAATGTGTAACTaGTTTATCCACAAACACAAG | + |
|
Preference number: 2 (lower is better) Translates to: LKVINCPFTIYLGGGDMVDLMCN*FIHKHK Trigger: CTTGTGTTTGTGGATAAAGCAGTTACACATTAAGTC...AACCATGTCACCACCTCCCAGGTAAATGGTGAAAGGACAGTTTATAACTTTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTACAGATCCTTTGGGAAAAGTCGCATCGCTTGGTAAACAAACTGAGATCTATCACATACACATCATaGCATATTAAGAGCGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KVQILWEKSHRLVNKLRSITYTS*HIKSER Trigger: CCTTTCGCTCTTAATATGCCATGATGTGTATGTGAT...AGATCTCAGTTTGTTTACCAAGCGATGCGACTTTTCCCAAAGGATCTGTACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR-3UTR TCA 90 bp | CTTGTTGCAAGAGCTAACTCTACAGAGTATGTTGAAGATAATGTTGGTGTTGGTTCTTTGCAAACCTACTaGATTAAAGCATCTGTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LVARANSTEYVEDNVGVGSLQTY*IKASVV Trigger: TACCACAGATGCTTTAATTCAGTAGGTTTGCAAAGA...ACCAACACCAACATTATCTTCAACATACTCTGTAGAGTTAGCTCTTGCAACAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| 3UTR-3UTR TCA 90 bp | AAATTAATCACATACACATCATGGCATATTAAGAGCGAAAGGAGAAGACGCACAGCATTGCTGACCTCTTaGATTTCAAAGAGGTTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: KLITYTSWHIKSERRRRTALLTS*ISKRFN Trigger: ATTAAACCTCTTTGAAATTCAAGAGGTCAGCAATGC...TGTGCGTCTTCTCCTTTCGCTCTTAATATGCCATGATGTGTATGTGATTAATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR-3UTR CCA 90 bp | AAATTAATCACATACACATCATGGCATATTAAGAGCGAAAGGAGAAGACGCACACAGCTACAGAATAGATaGATGTACAGTCAAGTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: KLITYTSWHIKSERRRRTQLQNR*MYSQVS Trigger: ACTAACTTGACTGTACATCCATCTATTCTGTAGCTG...TGTGCGTCTTCTCCTTTCGCTCTTAATATGCCATGATGTGTATGTGATTAATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR TCA 72 bp | CCACAGCGACTTGATATGCAGGGTGGGGGTGAAGGGTaGCACCAAGAGGGGGCTTCCCATTCTAAGAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: PQRLDMQGGGEG*HQEGASHSKRK Trigger: TTTCCTCTTAGAATGGGAAGCCCCCTCTTGGTGTCACCCTTCACCCCCACCCTGCATATCAAGTCGCTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| 3UTR CCA 72 bp | TTGCCAGGTGTTGCTACCAGAGGCATGTTTGCAAGGTaGAGTACAACTTGCTTCTGGTTTCCTTTGAGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: LPGVATRGMFAR*STTCFWFPLSV Trigger: CACGCTCAAAGGAAACCAGAAGCAAGTTGTACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR-3UTR CAA 90 bp | ATTGCCCAAATTGCCAGGTGTTGCTACCAGAGGCATGTTTGCAAGGTGGAGTACTGCTTCTGGTTTCCTTaGAGCGTGGATCTACTACAC | + |
|
Preference number: 3 (lower is better) Translates to: IAQIARCCYQRHVCKVEYCFWFP*SVDLLH Trigger: GTGTAGTAGATCCACGCTCAAAGGAAACCAGAAGCA...GTACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGGCAATTTGGGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTTGGCAGAAGCACTGGAGCTCAGAGCTTATCATCACCAGTCGCCCAGAGTAAGGTGGAGTACAACTaGCTTCTGGTTTCCTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SFGRSTGAQSLSSPVAQSKVEYN*LLVSFE Trigger: CTCAAAGGAAACCAGAAGCAAGTTGTACTCCACCTT...ACTCTGGGCGACTGGTGATGATAAGCTCTGAGCTCCAGTGCTTCTGCCAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAGCAGGTAAGTGGATGTGTGTCACGAGTGAGAAATGCCAGTGGAAAGAAAGTACTGTCCAGAGTTTaGGCAGAAGCACTGGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LQQVSGCVSRVRNASGKKVLSRV*AEALEL Trigger: GAGCTCCAGTGCTTCTGCCAAAACTCTGGACAGTAC...TTTCTTTCCACTGGCATTTCTCACTCGTGACACACATCCACTTACCTGCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR GCA 72 bp | GCTACCAGAGGCATGTTTGCAAGGTGGAGTACAACTTaGTTCTGGTTTCCTTTGAGCGTGGATCTACTACAC | + |
|
Preference number: 3 (lower is better) Translates to: ATRGMFARWSTT*FWFPLSVDLLH Trigger: GTGTAGTAGATCCACGCTCAAAGGAAACCAGAAGCAAGTTGTACTCCACCTTGCAAACATGCCTCTGGTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR GCA 72 bp | GCCCAAATTGCCAGGTGTTGCTACCAGAGGCATGTTTaGAAGGTGGAGTACAACTTGCTTCTGGTTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: AQIARCCYQRHV*KVEYNLLLVSF Trigger: AAAGGAAACCAGAAGCAAGTTGTACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGGCAATTTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR GCA 72 bp | CAGAGCTTATCATCACCAGTCGCCCAGAGTCCATGCTaGTCAGTGAGAATAACTCTAAAAAGGACCACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: QSLSSPVAQSPC*SVRITLKRTTG Trigger: ACCTGTGGTCCTTTTTAGAGTTATTCTCACTGAGCAGCATGGACTCTGGGCGACTGGTGATGATAAGCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAGCAGGTAAGTGGATGTGTGTCACGAGTGAGAAATGCCAGTGGAAAGAAACACACAACAGGGCACTaGAGAGAAGCTGGTTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LQQVSGCVSRVRNASGKKHTTGH*REAGFR Trigger: TCTGAAACCAGCTTCTCTCAAGTGCCCTGTTGTGTG...TTTCTTTCCACTGGCATTTCTCACTCGTGACACACATCCACTTACCTGCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR-3UTR CAA 90 bp | TATGCTGGGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTAAGGTGGAGTACAACTaGCTTCTGGTTTCCTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: YAGPICEVFHTTGHLREAKVEYN*LLVSFE Trigger: CTCAAAGGAAACCAGAAGCAAGTTGTACTCCACCTT...AGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCCAGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAGCAGGTAAGTGGATGTGTGTCACGAGTGAGAAATGCCAGTGGAAAGAAATTTCCATTGCCCAAATaGCCAGGTGTTGCTACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LQQVSGCVSRVRNASGKKFPLPK*PGVATR Trigger: TCTGGTAGCAACACCTGGCAATTTGGGCAATGGAAA...TTTCTTTCCACTGGCATTTCTCACTCGTGACACACATCCACTTACCTGCTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR TCA 72 bp | CTAAAAAGGACCACAGGTAGGCTTCAGCACGCTTCGTaGAAGAAATGGTTAGAGCATGTGCTGTCAAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LKRTTGRLQHAS*KKWLEHVLSKP Trigger: TGGCTTTGACAGCACATGCTCTAACCATTTCTTTCACGAAGCGTGCTGAAGCCTACCTGTGGTCCTTTTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR-3UTR CAA 90 bp | ATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTGGTTTCAGACATTTTCCATTGCCCAAATaGCCAGGTGTTGCTACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ICEVFHTTGHLREAGFRHFPLPK*PGVATR Trigger: TCTGGTAGCAACACCTGGCAATTTGGGCAATGGAAA...ATGTCTGAAACCAGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTGGTTTCTACGATTCCATTATTTaGCCAGAAGCTCTCTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: GPICEVFHTTGHLREAGFYDSII*PEALCT Trigger: TGTACAGAGAGCTTCTGGCAAAATAATGGAATCGTA...GAAACCAGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTCAGAGATTCCTATCCAATTACTCTGCATGATGGAAATAATGGAGCCACTCGTAAATGGACAGCCTaGTCTGGCCTCAGTGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KFRDSYPITLHDGNNGATRKWTA*SGLSGR Trigger: TCTCCCACTGAGGCCAGACAAGGCTGTCCATTTACG...AGTGGCTCCATTATTTCCATCATGCAGAGTAATTGGATAGGAATCTCTGAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| 3UTR GCA 72 bp | AAGAGTCTCTTCATTTGTCGTTTCCATTGCCCAAATTaGCAGGTGTTGCTACCAGAGGCATGTTTGCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: KSLFICRFHCPN*QVLLPEACLQG Trigger: ACCTTGCAAACATGCCTCTGGTAGCAACACCTGGCAATTTGGGCAATGGAAACGACAAATGAAGAGACTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR CCA 72 bp | ACAAAACAAAGTCCCAAAGCTAGAGTTCTCTCAGTGTaGGGGTACTTATCTGTTATGCACACACCAGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: TKQSPKARVLSV*GYLSVMHTPGH Trigger: GTGTCCTGGTGTGTGCATAACAGATAAGTACCCCCACACTGAGAGAACTCTAGCTTTGGGACTTTGTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| 3UTR CCA 72 bp | GCCCAGTCTAAGTCTGGTGATTCTGAGGCCCAACCCTaGGTTAGGGCTATTGCTTTTACTTCAACAATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: AQSKSGDSEAQP*VRAIAFTSTIN Trigger: ATTTATTGTTGAAGTAAAAGCAATAGCCCTAACCCAGGGTTGGGCCTCAGAATCACCAGACTTAGACTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTGGTTTCCTAAACAGTACAACTTaGTTCTGTCCAGAAATACAG | + |
|
Preference number: 3 (lower is better) Translates to: GPICEVFHTTGHLREAGFLNSTT*FCPEIQ Trigger: CTGTATTTCTGGACAGAACAAAGTTGTACTGTTTAG...GAAACCAGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR TCA 72 bp | CATATAAGACCTCCTTATATATGCTGGGCCAATATGTaGAGTGTTCCACACAACAGGGCACTTGAGAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: HIRPPYICWANM*SVPHNRALERS Trigger: GCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCCAGCATATATAAGGAGGTCTTATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR GCA 72 bp | GACAAAAAGAAGAGTCTCTTCATTTGTCGTTTCCATTaGCCAAATTGCCAGGTGTTGCTACCAGAGGCATGT | + |
|
Preference number: 3 (lower is better) Translates to: DKKKSLFICRFH*PNCQVLLPEAC Trigger: ACATGCCTCTGGTAGCAACACCTGGCAATTTGGGCAATGGAAACGACAAATGAAGAGACTCTTCTTTTTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR-3UTR CAA 90 bp | GAGTACAACTTGCTTCTGGTTTCCTTTGAGCGTGGATCTACTACACAAACTTACAGGGCTAATAGTGTTTaGACTGCTTCCCAGAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: EYNLLLVSFERGSTTQTYRANSV*TASQKL Trigger: CAGTTTCTGGGAAGCAGTCAAAACACTATTAGCCCT...GTAAGTTTGTGTAGTAGATCCACGCTCAAAGGAAACCAGAAGCAAGTTGTACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR TCA 72 bp | CCGAATACATTCTGTCTCCCTCTCTTATGTGAGGCGTaGAAGCAAAACTTACATACAACAAACACACACCCT | + |
|
Preference number: 3 (lower is better) Translates to: PNTFCLPLLCEA*KQNLHTTNTHP Trigger: AGGGTGTGTGTTTGTTGTATGTAAGTTTTGCTTTCACGCCTCACATAAGAGAGGGAGACAGAATGTATTCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| 3UTR CCA 72 bp | GGTAAGTGGATGTGTGTCACGAGTGAGAAATGCCAGTaGAAAGAAAGCCTTTCTAAAAATCTGGTGATTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GKWMCVTSEKCQ*KESLSKNLVIE Trigger: CTCAATCACCAGATTTTTAGAAAGGCTTTCTTTCCACTGGCATTTCTCACTCGTGACACACATCCACTTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTTGCAAGAGCTAACTCTACAGAGTATGTTGAAGATAATGTTGGTGTTGGTAGAATGAACAGGCTGTaGACAGTAGTCCAGGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LVARANSTEYVEDNVGVGRMNRL*TVVQVR Trigger: TCTCACCTGGACTACTGTCAACAGCCTGTTCATTCT...ACCAACACCAACATTATCTTCAACATACTCTGTAGAGTTAGCTCTTGCAACAAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| 3UTR TCA 72 bp | TTGCAAGGTGGAGTACAACTTGCTTCTGGTTTCCTTTaGGCGTGGATCTACTACACAAACTTACATACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LQGGVQLASGFL*AWIYYTNLHTL Trigger: TAGAGTATGTAAGTTTGTGTAGTAGATCCACGCTCAAAGGAAACCAGAAGCAAGTTGTACTCCACCTTGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCAAATCTGATTCACTATGGGAGGTTAACTAATGATGTGGAACTCAGAATCAGGGCTAATAGTGTTTaGACTGCTTCCCAGAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: FANLIHYGRLTNDVELRIRANSV*TASQKL Trigger: CAGTTTCTGGGAAGCAGTCAAAACACTATTAGCCCT...GATTCTGAGTTCCACATCATTAGTTAACCTCCCATAGTGAATCAGATTTGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTACAGATCCTTTGGGAAAAGTCGCATCGCTTGGTAAACAAACTGAGATCTCTAAACAGTACAACTTaGTTCTGTCCAGAAATACAG | + |
|
Preference number: 3 (lower is better) Translates to: KVQILWEKSHRLVNKLRSLNSTT*FCPEIQ Trigger: CTGTATTTCTGGACAGAACAAAGTTGTACTGTTTAG...AGATCTCAGTTTGTTTACCAAGCGATGCGACTTTTCCCAAAGGATCTGTACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR GCA 72 bp | ATGTGGAACTCAGAATCCTTACCTTTCATACTGAGGTaGTATGGTAATATTAGGCAGACCACAACTAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: MWNSESLPFILR*YGNIRQTTTNF Trigger: AAAGTTAGTTGTGGTCTGCCTAATATTACCATAGCACCTCAGTATGAAAGGTAAGGATTCTGAGTTCCACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR TCA 72 bp | TTTGTAATTCATATTGATGAGACAGGTATAGTTTGCTaGTTTGAATTGTTTGCCATTCCAGCTAAGCATGCC | + |
|
Preference number: 3 (lower is better) Translates to: FVIHIDETGIVC*FELFAIPAKHA Trigger: GGCATGCTTAGCTGGAATGGCAAACAATTCAAATCAGCAAACTATACCTGTCTCATCAATATGAATTACAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| 3UTR CCA 72 bp | CATTTCAAAACGCTGTTCTACCAGCTACAGAATAGATaGATGTACAGTCAAGTTAGTACGTTATTTCTTATT | + |
|
Preference number: 3 (lower is better) Translates to: HFKTLFYQLQNR*MYSQVSTLFLI Trigger: AATAAGAAATAACGTACTAACTTGACTGTACATCCATCTATTCTGTAGCTGGTAGAACAGCGTTTTGAAATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR GCA 90 bp | AGTTTTGGCAGAAGCACTGGAGCTCAGAGCTTATCATCACCAGTCGCCCAGAGTGGGAGGATGTGGACCTaGTGTCTTCTGGCAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFGRSTGAQSLSSPVAQSGRMWT*CLLASL Trigger: AAGGCTTGCCAGAAGACAGCAGGTCCACATCCTCCC...ACTCTGGGCGACTGGTGATGATAAGCTCTGAGCTCCAGTGCTTCTGCCAAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR GCA 90 bp | GTCTGGCCTCAGTGGGAGACGTGCCTAGGCCCACAGCGACTTGATATGCAGGGTAGCTTCCGAGTTATGTaGAGTTTTCTTGTGTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VWPQWETCLGPQRLDMQGSFRVM*SFLVFS Trigger: CGAAAACACAAGAAAACTGCACATAACTCGGAAGCT...ACCCTGCATATCAAGTCGCTGTGGGCCTAGGCACGTCTCCCACTGAGGCCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR GCA 90 bp | TTGATATGCAGGGTGGGGGTGAAGGGTGACACCAAGAGGGGGCTTCCCATTCTACATGCACTTGTAATGTaGGGCTGCCTTCTTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LICRVGVKGDTKRGLPILHALVM*GCLLGI Trigger: AATGCCAAGAAGGCAGCCGCACATTACAAGTGCATG...TAGAATGGGAAGCCCCCTCTTGGTGTCACCCTTCACCCCCACCCTGCATATCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR CCA 90 bp | AGTTTTGGCAGAAGCACTGGAGCTCAGAGCTTATCATCACCAGTCGCCCAGAGTTTCCATGGGAGGATGTaGACCTGCTGTCTTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFGRSTGAQSLSSPVAQSFHGRM*TCCLLA Trigger: TGCCAGAAGACAGCAGGTCCACATCCTCCCATGGAA...ACTCTGGGCGACTGGTGATGATAAGCTCTGAGCTCCAGTGCTTCTGCCAAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR TCA 90 bp | GGGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTGGTTTCCTTAGTCTTTGGAGATaGGGGCTCCAGTTCATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPICEVFHTTGHLREAGFLSLWR*GLQFML Trigger: GAGCATGAACTGGAGCCCTCATCTCCAAAGACTAAG...GAAACCAGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR GCA 90 bp | ATTGCCCAAATTGCCAGGTGTTGCTACCAGAGGCATGTTTGCAAGGTGGAGTACCATGCACTTGTGGTGTaGTGCCACCTTCTGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IAQIARCCYQRHVCKVEYHALVV*CHLLVF Trigger: GAAAACCAGAAGGTGGCAGCACACCACAAGTGCATG...GTACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGGCAATTTGGGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078944.13 |
||
| CDS-3UTR CCA 90 bp | AGTTTTGGCAGAAGCACTGGAGCTCAGAGCTTATCATCACCAGTCGCCCAGAGTGGACCTGCTGTCTTCTaGCAAGCCTTTAAGGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SFGRSTGAQSLSSPVAQSGPAVF*QAFKVS Trigger: ACTAACCTTAAAGGCTTGCCAGAAGACAGCAGGTCC...ACTCTGGGCGACTGGTGATGATAAGCTCTGAGCTCCAGTGCTTCTGCCAAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR TCA 90 bp | AGTTTTGGCAGAAGCACTGGAGCTCAGAGCTTATCATCACCAGTCGCCCAGAGTCTCATTATCAGAATGTaGGGACACCAAAGCAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: SFGRSTGAQSLSSPVAQSLIIRM*GHQSRR Trigger: TCGTCTGCTTTGGTGTCCTCACATTCTGATAATGAG...ACTCTGGGCGACTGGTGATGATAAGCTCTGAGCTCCAGTGCTTCTGCCAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078944.13 |
||
| CDS-3UTR GCA 90 bp | TTGATATGCAGGGTGGGGGTGAAGGGTGACACCAAGAGGGGGCTTCCCATTCTAGAGGGCTCCAGTTCATaGTCATTAAAACTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LICRVGVKGDTKRGLPILEGSSS*SLKLSS Trigger: AGAAGAAAGTTTTAATGAGCATGAACTGGAGCCCTC...TAGAATGGGAAGCCCCCTCTTGGTGTCACCCTTCACCCCCACCCTGCATATCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR CCA 90 bp | GGGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTGGTTTCATTTCATCTGTTCCATaGGAGGATGTGGACCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPICEVFHTTGHLREAGFISSVP*EDVDLL Trigger: CAGCAGGTCCACATCCTCCCATGGAACAGATGAAAT...GAAACCAGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR CAA 72 bp | CTCTGTACAGCACAGAAAGGTGTACTGTCCAGAGTTTaGGCAGAAGCACTGGAGCTCAGAGCTTATCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LCTAQKGVLSRV*AEALELRAYHH Trigger: GTGATGATAAGCTCTGAGCTCCAGTGCTTCTGCCAAAACTCTGGACAGTACACCTTTCTGTGCTGTACAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR TCA 90 bp | GGGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTGGTTTCATAGTAGCACCAGGCTaGCTGCAAAGTGTACATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPICEVFHTTGHLREAGFIVAPG*LQSVHF Trigger: GAAATGTACACTTTGCAGTCAGCCTGGTGCTACTAT...GAAACCAGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR GCA 90 bp | CTTCAGCAGGTAAGTGGATGTGTGTCACGAGTGAGAAATGCCAGTGGAAAGAAAGCACTTGTGGTGTGCTaGCACCTTCTGGTTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQQVSGCVSRVRNASGKKALVVC*HLLVFR Trigger: TCTGAAAACCAGAAGGTGGCAGCACACCACAAGTGC...TTTCTTTCCACTGGCATTTCTCACTCGTGACACACATCCACTTACCTGCTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078944.13 |
||
| CDS-3UTR CCA 90 bp | TATGCTGGGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTATTTCATCTGTTCCATaGGAGGATGTGGACCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YAGPICEVFHTTGHLREAISSVP*EDVDLL Trigger: CAGCAGGTCCACATCCTCCCATGGAACAGATGAAAT...AGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCCAGCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR CCA 90 bp | TTAGGGATGAACATGGGAATTGCCTCAAGTTTGACCCTCTTTGCAAACCTACTGAGGACTGCTCCTGTGTaGAGACCTATCTCGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGMNMGIASSLTLFANLLRTAPV*RPISVG Trigger: TCCTACCGAGATAGGTCTCCACACAGGAGCAGTCCT...CAGTAGGTTTGCAAAGAGGGTCAAACTTGAGGCAATTCCCATGTTCATCCCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR CCA 90 bp | ATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTGGTTTCAGACATAGGACTGCTCCTGTGTaGAGACCTATCTCGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ICEVFHTTGHLREAGFRHRTAPV*RPISVG Trigger: TCCTACCGAGATAGGTCTCCACACAGGAGCAGTCCT...ATGTCTGAAACCAGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR TCA 90 bp | TCTAAGTCTGGTGATTCTGAGGCCCAACCCTGGGTTAGGGCTATTGCTTTTACTCTCATTATCAGAATGTaGGGACACCAAAGCAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: SKSGDSEAQPWVRAIAFTLIIRM*GHQSRR Trigger: TCGTCTGCTTTGGTGTCCTCACATTCTGATAATGAG...AGTAAAAGCAATAGCCCTAACCCAGGGTTGGGCCTCAGAATCACCAGACTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR TCA 90 bp | TATGCTGGGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTATAGTAGCACCAGGCTaGCTGCAAAGTGTACATTTC | + |
|
Preference number: 4 (lower is better) Translates to: YAGPICEVFHTTGHLREAIVAPG*LQSVHF Trigger: GAAATGTACACTTTGCAGTCAGCCTGGTGCTACTAT...AGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCCAGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR GCA 90 bp | TTAGGGATGAACATGGGAATTGCCTCAAGTTTGACCCTCTTTGCAAACCTACTGCATGCACTTGTGGTGTaGTGCCACCTTCTGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGMNMGIASSLTLFANLLHALVV*CHLLVF Trigger: GAAAACCAGAAGGTGGCAGCACACCACAAGTGCATG...CAGTAGGTTTGCAAAGAGGGTCAAACTTGAGGCAATTCCCATGTTCATCCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR CCA 90 bp | GGGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTGGTTTCTGTGCTGCCACCTTCTaGTTTTCAGATATCAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GPICEVFHTTGHLREAGFCAATF*FSDISN Trigger: GTTACTGATATCTGAAAACCAGAAGGTGGCAGCACA...GAAACCAGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078944.13 |
||
| CDS-3UTR CCA 90 bp | ATCACATACACATCATGGCATATTAAGAGCGAAAGGAGAAGACGCACAAGGCAATTCCATGGGAGGATGTaGACCTGCTGTCTTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ITYTSWHIKSERRRRTRQFHGRM*TCCLLA Trigger: TGCCAGAAGACAGCAGGTCCACATCCTCCCATGGAA...TTGCCTTGTGCGTCTTCTCCTTTCGCTCTTAATATGCCATGATGTGTATGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR CCA 90 bp | ATCACATACACATCATGGCATATTAAGAGCGAAAGGAGAAGACGCACAAGGCAAAGGACTGCTCCTGTGTaGAGACCTATCTCGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ITYTSWHIKSERRRRTRQRTAPV*RPISVG Trigger: TCCTACCGAGATAGGTCTCCACACAGGAGCAGTCCT...TTGCCTTGTGCGTCTTCTCCTTTCGCTCTTAATATGCCATGATGTGTATGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR CAA 72 bp | TGCTACCAGAGGCATGTTTGCAAGGTGGAGTACAACTaGCTTCTGGTTTCCTTTGAGCGTGGATCTACTACA | + |
|
Preference number: 4 (lower is better) Translates to: CYQRHVCKVEYN*LLVSFERGSTT Trigger: TGTAGTAGATCCACGCTCAAAGGAAACCAGAAGCAAGTTGTACTCCACCTTGCAAACATGCCTCTGGTAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR CAA 72 bp | TATGCACACACCAGGACACCTGTACTAGGTTCACCTTaGCCCTTTATGTCTCAGCTCAAACTCCTAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YAHTRTPVLGSP*PFMSQLKLLRA Trigger: TGCTCTTAGGAGTTTGAGCTGAGACATAAAGGGCAAAGGTGAACCTAGTACAGGTGTCCTGGTGTGTGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR TCA 90 bp | ATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTGGTTTCAGACATGTTGCTCCAGGACAATaGCAAAGAGAACACATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ICEVFHTTGHLREAGFRHVAPGQ*QREHIS Trigger: GCTGATGTGTTCTCTTTGTCATTGTCCTGGAGCAAC...ATGTCTGAAACCAGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078944.13 |
||
| CDS-3UTR TCA 90 bp | GTTCTGTTAGGGATGAACATGGGAATTGCCTCAAGTTTGACCCTCTTTGCAAACGTTGCTCCAGGACAATaGCAAAGAGAACACATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLLGMNMGIASSLTLFANVAPGQ*QREHIS Trigger: GCTGATGTGTTCTCTTTGTCATTGTCCTGGAGCAAC...GTTTGCAAAGAGGGTCAAACTTGAGGCAATTCCCATGTTCATCCCTAACAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR GCA 90 bp | CAAAACAAAGTCCCAAAGCTAGAGTTCTCTCAGTGTGGGGGTACTTATCTGTTAGCACTTGTGGTGTGCTaGCACCTTCTGGTTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QNKVPKLEFSQCGGTYLLALVVC*HLLVFR Trigger: TCTGAAAACCAGAAGGTGGCAGCACACCACAAGTGC...TAACAGATAAGTACCCCCACACTGAGAGAACTCTAGCTTTGGGACTTTGTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR GCA 90 bp | TTTGCCCTTTATGTCTCAGCTCAAACTCCTAAGAGCAAACTCAAACACTTCTTAGGGAGGATGTGGACCTaGTGTCTTCTGGCAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FALYVSAQTPKSKLKHFLGRMWT*CLLASL Trigger: AAGGCTTGCCAGAAGACAGCAGGTCCACATCCTCCC...TAAGAAGTGTTTGAGTTTGCTCTTAGGAGTTTGAGCTGAGACATAAAGGGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR GCA 90 bp | TATGCTGGGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTCAGAAGAAAACAACATaGACTTGTAATGTGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YAGPICEVFHTTGHLREAQKKTT*TCNVRL Trigger: CAGCCGCACATTACAAGTGCATGTTGTTTTCTTCTG...AGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCCAGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR CCA 90 bp | GTTCTGTTAGGGATGAACATGGGAATTGCCTCAAGTTTGACCCTCTTTGCAAACGGACCTGCTGTCTTCTaGCAAGCCTTTAAGGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLLGMNMGIASSLTLFANGPAVF*QAFKVS Trigger: ACTAACCTTAAAGGCTTGCCAGAAGACAGCAGGTCC...GTTTGCAAAGAGGGTCAAACTTGAGGCAATTCCCATGTTCATCCCTAACAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| 3UTR CAA 72 bp | TTCATTTGTCGTTTCCATTGCCCAAATTGCCAGGTGTaGCTACCAGAGGCATGTTTGCAAGGTGGAGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: FICRFHCPNCQV*LPEACLQGGVQ Trigger: TTGTACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGGCAATTTGGGCAATGGAAACGACAAATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR GCA 90 bp | TATGCTGGGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTCTTGTAATGTGCGGCTaGCTTCTTGGCATTAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: YAGPICEVFHTTGHLREALVMCG*LLGIKY Trigger: ATATTTAATGCCAAGAAGGCAGCCGCACATTACAAG...AGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCCAGCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR GCA 90 bp | GAGTACAACTTGCTTCTGGTTTCCTTTGAGCGTGGATCTACTACACAAACTTACCATGCACTTGTAATGTaGGGCTGCCTTCTTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: EYNLLLVSFERGSTTQTYHALVM*GCLLGI Trigger: AATGCCAAGAAGGCAGCCGCACATTACAAGTGCATG...GTAAGTTTGTGTAGTAGATCCACGCTCAAAGGAAACCAGAAGCAAGTTGTACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR GCA 90 bp | CTTCAGCAGGTAAGTGGATGTGTGTCACGAGTGAGAAATGCCAGTGGAAAGAAACAGAAGAAAACAACATaGACTTGTAATGTGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQQVSGCVSRVRNASGKKQKKTT*TCNVRL Trigger: CAGCCGCACATTACAAGTGCATGTTGTTTTCTTCTG...TTTCTTTCCACTGGCATTTCTCACTCGTGACACACATCCACTTACCTGCTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR CCA 90 bp | ATCAAGTTCAGAGATTCCTATCCAATTACTCTGCATGATGGAAATAATGGAGCCTTCCATGGGAGGATGTaGACCTGCTGTCTTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IKFRDSYPITLHDGNNGAFHGRM*TCCLLA Trigger: TGCCAGAAGACAGCAGGTCCACATCCTCCCATGGAA...GGCTCCATTATTTCCATCATGCAGAGTAATTGGATAGGAATCTCTGAACTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR CCA 90 bp | CTCAAAGTTATAAACTGTCCTTTCACCATTTACCTGGGAGGTGGTGACATGGTTATTTCATCTGTTCCATaGGAGGATGTGGACCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKVINCPFTIYLGGGDMVISSVP*EDVDLL Trigger: CAGCAGGTCCACATCCTCCCATGGAACAGATGAAAT...AACCATGTCACCACCTCCCAGGTAAATGGTGAAAGGACAGTTTATAACTTTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR TCA 90 bp | TTTGCCCTTTATGTCTCAGCTCAAACTCCTAAGAGCAAACTCAAACACTTCTTACTTAGTCTTTGGAGATaGGGGCTCCAGTTCATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FALYVSAQTPKSKLKHFLLSLWR*GLQFML Trigger: GAGCATGAACTGGAGCCCTCATCTCCAAAGACTAAG...TAAGAAGTGTTTGAGTTTGCTCTTAGGAGTTTGAGCTGAGACATAAAGGGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR GCA 90 bp | CTTCAGCAGGTAAGTGGATGTGTGTCACGAGTGAGAAATGCCAGTGGAAAGAAAAGCTTCCGAGTTATGTaGAGTTTTCTTGTGTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LQQVSGCVSRVRNASGKKSFRVM*SFLVFS Trigger: CGAAAACACAAGAAAACTGCACATAACTCGGAAGCT...TTTCTTTCCACTGGCATTTCTCACTCGTGACACACATCCACTTACCTGCTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR CCA 90 bp | TATCTGTTGCTTAAAGGCCTGATAGCATTAGAATGCTTCTGTGGGCACCCAAAGTGTGCTGCCACCTTCTaGTTTTCAGATATCAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: YLLLKGLIALECFCGHPKCAATF*FSDISN Trigger: GTTACTGATATCTGAAAACCAGAAGGTGGCAGCACA...CTTTGGGTGCCCACAGAAGCATTCTAATGCTATCAGGCCTTTAAGCAACAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR CCA 90 bp | AGCCAAGACAAAAAGAAGAGTCTCTTCATTTGTCGTTTCCATTGCCCAAATTGCGGACCTGCTGTCTTCTaGCAAGCCTTTAAGGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQDKKKSLFICRFHCPNCGPAVF*QAFKVS Trigger: ACTAACCTTAAAGGCTTGCCAGAAGACAGCAGGTCC...GCAATTTGGGCAATGGAAACGACAAATGAAGAGACTCTTCTTTTTGTCTTGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR CAA 72 bp | TTAACTGCTGACAGTATACACAGGGCTAATAGTGTTTaGACTGCTTCCCAGAAACTGCAAACTACAGCTACG | + |
|
Preference number: 4 (lower is better) Translates to: LTADSIHRANSV*TASQKLQTTAT Trigger: CGTAGCTGTAGTTTGCAGTTTCTGGGAAGCAGTCAAAACACTATTAGCCCTGTGTATACTGTCAGCAGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR CAA 72 bp | CTGTCAAAGCCAAGACAAAAAGAAGAGTCTCTTCATTaGTCGTTTCCATTGCCCAAATTGCCAGGTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSKPRQKEESLH*SFPLPKLPGVA Trigger: AGCAACACCTGGCAATTTGGGCAATGGAAACGACAAATGAAGAGACTCTTCTTTTTGTCTTGGCTTTGACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR TCA 90 bp | TTTGCAAATCTGATTCACTATGGGAGGTTAACTAATGATGTGGAACTCAGAATCCTTAGTCTTTGGAGATaGGGGCTCCAGTTCATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FANLIHYGRLTNDVELRILSLWR*GLQFML Trigger: GAGCATGAACTGGAGCCCTCATCTCCAAAGACTAAG...GATTCTGAGTTCCACATCATTAGTTAACCTCCCATAGTGAATCAGATTTGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR TCA 90 bp | ACAACAAACACACACCCTAATCTGAGGATATCAGGGGAACAGAAGCAAAAAGGACCTCGCTTAATCTCCTaGAGTACAGTTTTAATATCG | + |
|
Preference number: 4 (lower is better) Translates to: TTNTHPNLRISGEQKQKGPRLIS*STVLIS Trigger: CGATATTAAAACTGTACTTCAGGAGATTAAGCGAGG...TCCTTTTTGCTTCTGTTCCCCTGATATCCTCAGATTAGGGTGTGTGTTTGTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR TCA 90 bp | GAGTACAACTTGCTTCTGGTTTCCTTTGAGCGTGGATCTACTACACAAACTTACCCTCGCTTAATCTCCTaGAGTACAGTTTTAATATCG | + |
|
Preference number: 4 (lower is better) Translates to: EYNLLLVSFERGSTTQTYPRLIS*STVLIS Trigger: CGATATTAAAACTGTACTTCAGGAGATTAAGCGAGG...GTAAGTTTGTGTAGTAGATCCACGCTCAAAGGAAACCAGAAGCAAGTTGTACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR GCA 90 bp | GAGTACAACTTGCTTCTGGTTTCCTTTGAGCGTGGATCTACTACACAAACTTACCTTGTAATGTGCGGCTaGCTTCTTGGCATTAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: EYNLLLVSFERGSTTQTYLVMCG*LLGIKY Trigger: ATATTTAATGCCAAGAAGGCAGCCGCACATTACAAG...GTAAGTTTGTGTAGTAGATCCACGCTCAAAGGAAACCAGAAGCAAGTTGTACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR GCA 90 bp | AAATTAATCACATACACATCATGGCATATTAAGAGCGAAAGGAGAAGACGCACACATGCACTTGTAATGTaGGGCTGCCTTCTTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: KLITYTSWHIKSERRRRTHALVM*GCLLGI Trigger: AATGCCAAGAAGGCAGCCGCACATTACAAGTGCATG...TGTGCGTCTTCTCCTTTCGCTCTTAATATGCCATGATGTGTATGTGATTAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR TCA 90 bp | AAATTAATCACATACACATCATGGCATATTAAGAGCGAAAGGAGAAGACGCACAGGTTTCTCTCGGATCTaGGCTTTATCATGCAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLITYTSWHIKSERRRRTGFSRI*ALSCNA Trigger: TGCATTGCATGATAAAGCTCAGATCCGAGAGAAACC...TGTGCGTCTTCTCCTTTCGCTCTTAATATGCCATGATGTGTATGTGATTAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR TCA 90 bp | AGCCAAGACAAAAAGAAGAGTCTCTTCATTTGTCGTTTCCATTGCCCAAATTGCCCTCGCTTAATCTCCTaGAGTACAGTTTTAATATCG | + |
|
Preference number: 4 (lower is better) Translates to: SQDKKKSLFICRFHCPNCPRLIS*STVLIS Trigger: CGATATTAAAACTGTACTTCAGGAGATTAAGCGAGG...GCAATTTGGGCAATGGAAACGACAAATGAAGAGACTCTTCTTTTTGTCTTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR GCA 90 bp | TTTGCAAATCTGATTCACTATGGGAGGTTAACTAATGATGTGGAACTCAGAATCATCACAGCCAATGGTTaGTCCAGGACAATGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FANLIHYGRLTNDVELRIITANG*SRTMTK Trigger: CTTTGTCATTGTCCTGGAGCAACCATTGGCTGTGAT...GATTCTGAGTTCCACATCATTAGTTAACCTCCCATAGTGAATCAGATTTGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR CAA 72 bp | AATAAAGTACAGATCCTTTGGGAAAAGTCGCATCGCTaGGTAAACAAACTGAGATCTGTCCTTGCACTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NKVQILWEKSHR*VNKLRSVLALQ Trigger: TTGAAGTGCAAGGACAGATCTCAGTTTGTTTACCAAGCGATGCGACTTTTCCCAAAGGATCTGTACTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| 3UTR CAA 72 bp | TTTCTTTTTGTGGTGCTTGGAACAAAACTTGGATTCTaGAATGTCCTAGTCAACTGTGCTGCTGTTGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FLFVVLGTKLGF*NVLVNCAAVEL Trigger: TAGCTCAACAGCAGCACAGTTGACTAGGACATTCAAGAATCCAAGTTTTGTTCCAAGCACCACAAAAAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR TCA 90 bp | TCTCACTCCTTATACAATAGCTTTGGTATTCTACATTTCCTTGGAACATCATCAATAGTAGCACCAGGCTaGCTGCAAAGTGTACATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHSLYNSFGILHFLGTSSIVAPG*LQSVHF Trigger: GAAATGTACACTTTGCAGTCAGCCTGGTGCTACTAT...TGATGATGTTCCAAGGAAATGTAGAATACCAAAGCTATTGTATAAGGAGTGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR GCA 90 bp | AAGTTCAGAGATTCCTATCCAATTACTCTGCATGATGGAAATAATGGAGCCACTCTTGTAATGTGCGGCTaGCTTCTTGGCATTAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: KFRDSYPITLHDGNNGATLVMCG*LLGIKY Trigger: ATATTTAATGCCAAGAAGGCAGCCGCACATTACAAG...AGTGGCTCCATTATTTCCATCATGCAGAGTAATTGGATAGGAATCTCTGAACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR GCA 90 bp | AAATTAATCACATACACATCATGGCATATTAAGAGCGAAAGGAGAAGACGCACAAGCTTCCGAGTTATGTaGAGTTTTCTTGTGTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KLITYTSWHIKSERRRRTSFRVM*SFLVFS Trigger: CGAAAACACAAGAAAACTGCACATAACTCGGAAGCT...TGTGCGTCTTCTCCTTTCGCTCTTAATATGCCATGATGTGTATGTGATTAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR GCA 90 bp | AAATTAATCACATACACATCATGGCATATTAAGAGCGAAAGGAGAAGACGCACAGAGGGCTCCAGTTCATaGTCATTAAAACTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLITYTSWHIKSERRRRTEGSSS*SLKLSS Trigger: AGAAGAAAGTTTTAATGAGCATGAACTGGAGCCCTC...TGTGCGTCTTCTCCTTTCGCTCTTAATATGCCATGATGTGTATGTGATTAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR GCA 90 bp | TCTCACTCCTTATACAATAGCTTTGGTATTCTACATTTCCTTGGAACATCATCACAGAAGAAAACAACATaGACTTGTAATGTGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHSLYNSFGILHFLGTSSQKKTT*TCNVRL Trigger: CAGCCGCACATTACAAGTGCATGTTGTTTTCTTCTG...TGATGATGTTCCAAGGAAATGTAGAATACCAAAGCTATTGTATAAGGAGTGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR CAA 90 bp | CATTGCCCAAATTGCCAGGTGTTGCTACCAGAGGCATGTTTGCAAGGTGGAGTAGAAAACAGCATGCACTaGTGGTGTGCTGCCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HCPNCQVLLPEACLQGGVENSMH*WCAATF Trigger: GAAGGTGGCAGCACACCACAAGTGCATGCTGTTTTC...TACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGGCAATTTGGGCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078944.13 |
||
| CDS-3UTR CAA 90 bp | TTGATATGCAGGGTGGGGGTGAAGGGTGACACCAAGAGGGGGCTTCCCATTCTAAACCATGTAAATCCCTaGCGAAGGTTTCTCTCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LICRVGVKGDTKRGLPILNHVNP*RRFLSD Trigger: ATCCGAGAGAAACCTTCGCAAGGGATTTACATGGTT...TAGAATGGGAAGCCCCCTCTTGGTGTCACCCTTCACCCCCACCCTGCATATCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR CAA 90 bp | TTGATATGCAGGGTGGGGGTGAAGGGTGACACCAAGAGGGGGCTTCCCATTCTAGTATTTTGCCTTGTCTaGTACACCACAGTGGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: LICRVGVKGDTKRGLPILVFCLV*YTTVVM Trigger: CATTACCACTGTGGTGTACAAGACAAGGCAAAATAC...TAGAATGGGAAGCCCCCTCTTGGTGTCACCCTTCACCCCCACCCTGCATATCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR CAA 90 bp | GTTTTGGCAGAAGCACTGGAGCTCAGAGCTTATCATCACCAGTCGCCCAGAGTCTCAATGTATTTTGCCTaGTCTTGTACACCACAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLAEALELRAYHHQSPRVSMYFA*SCTPQW Trigger: CCACTGTGGTGTACAAGACAAGGCAAAATACATTGA...GACTCTGGGCGACTGGTGATGATAAGCTCTGAGCTCCAGTGCTTCTGCCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS GCA 90 bp | GTAGTGGTATGTCCTGTGGCAGGTTTTCACATCACAGCCAATGGTTaGTCCAGGACAATGACAAAGAGAACACATCAGCTTTGTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VVVCPVAGFHITANG*SRTMTKRTHQLCAS Trigger: AGAGGCACAAAGCTGATGTGTTCTCTTTGTCATTGTCCTGGAGCAACCATTGGCTGTGATGTGAAAACCTGCCACAGGACATACCACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 |
||
| CDS CCA 90 bp | AGTGGTAGTGGTATGTCCTGTGGCAGGTTTTCACATCACAGCCAATaGTTGCTCCAGGACAATGACAAAGAGAACACATCAGCTTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGSGMSCGRFSHHSQ*LLQDNDKENTSALC Trigger: GCACAAAGCTGATGTGTTCTCTTTGTCATTGTCCTGGAGCAACCATTGGCTGTGATGTGAAAACCTGCCACAGGACATACCACTACCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 |
||
| CDS-3UTR CAA 90 bp | GGGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGAAGCTGGTTTCAACCATGTAAATCCCTaGCGAAGGTTTCTCTCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GPICEVFHTTGHLREAGFNHVNP*RRFLSD Trigger: ATCCGAGAGAAACCTTCGCAAGGGATTTACATGGTT...GAAACCAGCTTCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS GCA 90 bp | AATCCCTTGCGAAGGTTTCTCTCGGATCTGAGCTTTATCATGCAATaGACAGTGGTAGTGGTATGTCCTGTGGCAGGTTTTCACATCACA | + |
|
Preference number: 5 (lower is better) Translates to: NPLRRFLSDLSFIMQ*TVVVVCPVAGFHIT Trigger: TGTGATGTGAAAACCTGCCACAGGACATACCACTACCACTGTGCATTGCATGATAAAGCTCAGATCCGAGAGAAACCTTCGCAAGGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 ENSMUST00000154864.4 |
||
| CDS CCA 90 bp | TTCCATTTCATCTGTTCCATGGGAGGATGTGGACCTGCTGTCTTCTaGCAAGCCTTTAAGGTTAGTTTTTCTCGGTCTTCCTTTGCGACT | + |
|
Preference number: 5 (lower is better) Translates to: FHFICSMGGCGPAVF*QAFKVSFSRSSFAT Trigger: AGTCGCAAAGGAAGACCGAGAAAAACTAACCTTAAAGGCTTGCCAGAAGACAGCAGGTCCACATCCTCCCATGGAACAGATGAAATGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 ENSMUST00000154864.4 |
||
| CDS-3UTR CAA 90 bp | GTTTTGGCAGAAGCACTGGAGCTCAGAGCTTATCATCACCAGTCGCCCAGAGTCAACTGTCCACATTCCTaGTCTCTATTTGACTTACAA | + |
|
Preference number: 5 (lower is better) Translates to: VLAEALELRAYHHQSPRVNCPHS*SLFDLQ Trigger: TTGTAAGTCAAATAGAGACAAGGAATGTGGACAGTT...GACTCTGGGCGACTGGTGATGATAAGCTCTGAGCTCCAGTGCTTCTGCCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078944.13 |
||
| CDS-3UTR CAA 90 bp | CTCAAAGTTATAAACTGTCCTTTCACCATTTACCTGGGAGGTGGTGACATGGTTGAAAACAGCATGCACTaGTGGTGTGCTGCCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKVINCPFTIYLGGGDMVENSMH*WCAATF Trigger: GAAGGTGGCAGCACACCACAAGTGCATGCTGTTTTC...AACCATGTCACCACCTCCCAGGTAAATGGTGAAAGGACAGTTTATAACTTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR CAA 90 bp | CATTGCCCAAATTGCCAGGTGTTGCTACCAGAGGCATGTTTGCAAGGTGGAGTATATGCAATTTCCCTCTaGCTTCATTTTCTTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HCPNCQVLLPEACLQGGVYAISL*LHFLPP Trigger: GGGAGGAAGAAAATGAAGCAAGAGGGAAATTGCATA...TACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGGCAATTTGGGCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR CAA 90 bp | CATTGCCCAAATTGCCAGGTGTTGCTACCAGAGGCATGTTTGCAAGGTGGAGTAGTATTTTGCCTTGTCTaGTACACCACAGTGGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: HCPNCQVLLPEACLQGGVVFCLV*YTTVVM Trigger: CATTACCACTGTGGTGTACAAGACAAGGCAAAATAC...TACTCCACCTTGCAAACATGCCTCTGGTAGCAACACCTGGCAATTTGGGCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR CAA 90 bp | ATCACATACACATCATGGCATATTAAGAGCGAAAGGAGAAGACGCACAAGGCAACATCACAGCCAATGGTaGCTCCAGGACAATGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: ITYTSWHIKSERRRRTRQHHSQW*LQDNDK Trigger: TTTGTCATTGTCCTGGAGCAACCATTGGCTGTGATG...TTGCCTTGTGCGTCTTCTCCTTTCGCTCTTAATATGCCATGATGTGTATGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS CCA 90 bp | AAAGCAGACGAAAACAGCATGCACTTGTGGTGTGCTGCCACCTTCTaGTTTTCAGATATCAGTAACTGTCCACATTCCTTGTCTCTATTT | + |
|
Preference number: 5 (lower is better) Translates to: KADENSMHLWCAATF*FSDISNCPHSLSLF Trigger: AAATAGAGACAAGGAATGTGGACAGTTACTGATATCTGAAAACCAGAAGGTGGCAGCACACCACAAGTGCATGCTGTTTTCGTCTGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 |
||
| CDS-3UTR CAA 90 bp | TCTAAGTCTGGTGATTCTGAGGCCCAACCCTGGGTTAGGGCTATTGCTTTTACTAACTGTCCACATTCCTaGTCTCTATTTGACTTACAA | + |
|
Preference number: 5 (lower is better) Translates to: SKSGDSEAQPWVRAIAFTNCPHS*SLFDLQ Trigger: TTGTAAGTCAAATAGAGACAAGGAATGTGGACAGTT...AGTAAAAGCAATAGCCCTAACCCAGGGTTGGGCCTCAGAATCACCAGACTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS TCA 90 bp | AACATCTTCAATAGAAAATCCACCAAGACTCTCATTATCAGAATGTaGGGACACCAAAGCAGACGAAAACAGCATGCACTTGTGGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: NIFNRKSTKTLIIRM*GHQSRRKQHALVVC Trigger: GCACACCACAAGTGCATGCTGTTTTCGTCTGCTTTGGTGTCCTCACATTCTGATAATGAGAGTCTTGGTGGATTTTCTATTGAAGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 |
||
| CDS-3UTR CAA 90 bp | ACAACAAACACACACCCTAATCTGAGGATATCAGGGGAACAGAAGCAAAAAGGATATGCAATTTCCCTCTaGCTTCATTTTCTTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TTNTHPNLRISGEQKQKGYAISL*LHFLPP Trigger: GGGAGGAAGAAAATGAAGCAAGAGGGAAATTGCATA...TCCTTTTTGCTTCTGTTCCCCTGATATCCTCAGATTAGGGTGTGTGTTTGTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS GCA 90 bp | CTGAACAGTGCCAGAAGAAAACAACATGCACTTGTAATGTGCGGCTaGCTTCTTGGCATTAAATATATGCAATTTCCCTCTTGCTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LNSARRKQHALVMCG*LLGIKYMQFPSCFI Trigger: AATGAAGCAAGAGGGAAATTGCATATATTTAATGCCAAGAAGGCAGCCGCACATTACAAGTGCATGTTGTTTTCTTCTGGCACTGTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 ENSMUST00000154864.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTACAGATCCTTTGGGAAAAGTCGCATCGCTTGGTAAACAAACTGAGATCTGTATTTTGCCTTGTCTaGTACACCACAGTGGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: KVQILWEKSHRLVNKLRSVFCLV*YTTVVM Trigger: CATTACCACTGTGGTGTACAAGACAAGGCAAAATAC...AGATCTCAGTTTGTTTACCAAGCGATGCGACTTTTCCCAAAGGATCTGTACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTACAGATCCTTTGGGAAAAGTCGCATCGCTTGGTAAACAAACTGAGATCTTCAATGTATTTTGCCTaGTCTTGTACACCACAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KVQILWEKSHRLVNKLRSSMYFA*SCTPQW Trigger: CCACTGTGGTGTACAAGACAAGGCAAAATACATTGA...AGATCTCAGTTTGTTTACCAAGCGATGCGACTTTTCCCAAAGGATCTGTACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS GCA 90 bp | TTGCGACTTTTCTTCTTAGTCTTTGGAGATGAGGGCTCCAGTTCATaGTCATTAAAACTTTCTTCTAAATCAGCTTCCGAGTTATGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRLFFLVFGDEGSSS*SLKLSSKSASELCA Trigger: TGCACATAACTCGGAAGCTGATTTAGAAGAAAGTTTTAATGAGCATGAACTGGAGCCCTCATCTCCAAAGACTAAGAAGAAAAGTCGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 ENSMUST00000154864.4 |
||
| CDS-3UTR CAA 90 bp | AAATTAATCACATACACATCATGGCATATTAAGAGCGAAAGGAGAAGACGCACAAACCATGTAAATCCCTaGCGAAGGTTTCTCTCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KLITYTSWHIKSERRRRTNHVNP*RRFLSD Trigger: ATCCGAGAGAAACCTTCGCAAGGGATTTACATGGTT...TGTGCGTCTTCTCCTTTCGCTCTTAATATGCCATGATGTGTATGTGATTAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR CAA 90 bp | AAGTTCAGAGATTCCTATCCAATTACTCTGCATGATGGAAATAATGGAGCCACTTGTGCGGCTGCCTTCTaGGCATTAAATATATGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: KFRDSYPITLHDGNNGATCAAAF*ALNICN Trigger: ATTGCATATATTTAATGCCAAGAAGGCAGCCGCACA...AGTGGCTCCATTATTTCCATCATGCAGAGTAATTGGATAGGAATCTCTGAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR CAA 90 bp | ATCAAGTTCAGAGATTCCTATCCAATTACTCTGCATGATGGAAATAATGGAGCCTCAATGTATTTTGCCTaGTCTTGTACACCACAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: IKFRDSYPITLHDGNNGASMYFA*SCTPQW Trigger: CCACTGTGGTGTACAAGACAAGGCAAAATACATTGA...GGCTCCATTATTTCCATCATGCAGAGTAATTGGATAGGAATCTCTGAACTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101587.10 |
||
| CDS-3UTR CAA 90 bp | TTTGCAAATCTGATTCACTATGGGAGGTTAACTAATGATGTGGAACTCAGAATCTATGCAATTTCCCTCTaGCTTCATTTTCTTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FANLIHYGRLTNDVELRIYAISL*LHFLPP Trigger: GGGAGGAAGAAAATGAAGCAAGAGGGAAATTGCATA...GATTCTGAGTTCCACATCATTAGTTAACCTCCCATAGTGAATCAGATTTGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR CAA 90 bp | CTGTTCTACCAGCTACAGAATAGATGGATGTACAGTCAAGTTAGTACGTTATTTTGTGCGGCTGCCTTCTaGGCATTAAATATATGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LFYQLQNRWMYSQVSTLFCAAAF*ALNICN Trigger: ATTGCATATATTTAATGCCAAGAAGGCAGCCGCACA...AAATAACGTACTAACTTGACTGTACATCCATCTATTCTGTAGCTGGTAGAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS-3UTR CAA 90 bp | TTTGCAAATCTGATTCACTATGGGAGGTTAACTAATGATGTGGAACTCAGAATCTGTGCGGCTGCCTTCTaGGCATTAAATATATGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FANLIHYGRLTNDVELRICAAAF*ALNICN Trigger: ATTGCATATATTTAATGCCAAGAAGGCAGCCGCACA...GATTCTGAGTTCCACATCATTAGTTAACCTCCCATAGTGAATCAGATTTGCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000154864.4 |
||
| CDS CAA 90 bp | GGTAGTGGTATGTCCTGTGGCAGGTTTTCACATCACAGCCAATGGTaGCTCCAGGACAATGACAAAGAGAACACATCAGCTTTGTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GSGMSCGRFSHHSQW*LQDNDKENTSALCL Trigger: GAGGCACAAAGCTGATGTGTTCTCTTTGTCATTGTCCTGGAGCAACCATTGGCTGTGATGTGAAAACCTGCCACAGGACATACCACTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 |
||
| CDS GCA 72 bp | TGTCCTGTGGCAGGTTTTCACATCACAGCCAATGGTTaGTCCAGGACAATGACAAAGAGAACACATCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CPVAGFHITANG*SRTMTKRTHQL Trigger: AAGCTGATGTGTTCTCTTTGTCATTGTCCTGGAGCAACCATTGGCTGTGATGTGAAAACCTGCCACAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 |
||
| CDS GCA 72 bp | CGAAGGTTTCTCTCGGATCTGAGCTTTATCATGCAATaGACAGTGGTAGTGGTATGTCCTGTGGCAGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: RRFLSDLSFIMQ*TVVVVCPVAGF Trigger: AAAACCTGCCACAGGACATACCACTACCACTGTGCATTGCATGATAAAGCTCAGATCCGAGAGAAACCTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 ENSMUST00000154864.4 |
||
| CDS CCA 72 bp | ACATTTAGGCCTGGTATCATTAGGACTGCTCCTGTGTaGAGACCTATCTCGGTAGGAGCTACTTTCCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: TFRPGIIRTAPV*RPISVGATFHF Trigger: GAAATGGAAAGTAGCTCCTACCGAGATAGGTCTCCACACAGGAGCAGTCCTAATGATACCAGGCCTAAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 ENSMUST00000154864.4 |
||
| CDS CAA 72 bp | ATGTCCTGTGGCAGGTTTTCACATCACAGCCAATGGTaGCTCCAGGACAATGACAAAGAGAACACATCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: MSCGRFSHHSQW*LQDNDKENTSA Trigger: AGCTGATGTGTTCTCTTTGTCATTGTCCTGGAGCAACCATTGGCTGTGATGTGAAAACCTGCCACAGGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 |
||
| CDS CCA 72 bp | GAAAACAGCATGCACTTGTGGTGTGCTGCCACCTTCTaGTTTTCAGATATCAGTAACTGTCCACATTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ENSMHLWCAATF*FSDISNCPHSL Trigger: CAAGGAATGTGGACAGTTACTGATATCTGAAAACCAGAAGGTGGCAGCACACCACAAGTGCATGCTGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 |
||
| CDS TCA 72 bp | CAGGCTTTTATTTCGCATCCAATAGTAGCACCAGGCTaGCTGCAAAGTGTACATTTCATCCTTTTTCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: QAFISHPIVAPG*LQSVHFILFPR Trigger: GCGAGGAAAAAGGATGAAATGTACACTTTGCAGTCAGCCTGGTGCTACTATTGGATGCGAAATAAAAGCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 ENSMUST00000154864.4 |
||
| CDS TCA 72 bp | GTTTTCACATCACAGCCAATGGTTGCTCCAGGACAATaGCAAAGAGAACACATCAGCTTTGTGCCTCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: VFTSQPMVAPGQ*QREHISFVPLL Trigger: TAAAAGAGGCACAAAGCTGATGTGTTCTCTTTGTCATTGTCCTGGAGCAACCATTGGCTGTGATGTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 |
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| CDS CAA 90 bp | GCTGCCACCTTCTGGTTTTCAGATATCAGTAACTGTCCACATTCCTaGTCTCTATTTGACTTACAAAAGCCACATTTACGCTGTCTCGTA | + |
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Preference number: 6 (lower is better) Translates to: AATFWFSDISNCPHS*SLFDLQKPHLRCLV Trigger: TACGAGACAGCGTAAATGTGGCTTTTGTAAGTCAAATAGAGACAAGGAATGTGGACAGTTACTGATATCTGAAAACCAGAAGGTGGCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 |
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| CDS TCA 72 bp | AATAGAAAATCCACCAAGACTCTCATTATCAGAATGTaGGGACACCAAAGCAGACGAAAACAGCATGCACTT | + |
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Preference number: 6 (lower is better) Translates to: NRKSTKTLIIRM*GHQSRRKQHAL Trigger: AAGTGCATGCTGTTTTCGTCTGCTTTGGTGTCCTCACATTCTGATAATGAGAGTCTTGGTGGATTTTCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 |
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| CDS CAA 72 bp | TTCTGGTTTTCAGATATCAGTAACTGTCCACATTCCTaGTCTCTATTTGACTTACAAAAGCCACATTTACGC | + |
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Preference number: 6 (lower is better) Translates to: FWFSDISNCPHS*SLFDLQKPHLR Trigger: GCGTAAATGTGGCTTTTGTAAGTCAAATAGAGACAAGGAATGTGGACAGTTACTGATATCTGAAAACCAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078944.13 ENSMUST00000101587.10 |
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