Pregenerated sensors for PHF23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018572Ensembl transcript IDs: ENSMUST00000018716.10, ENSMUST00000101526.9, ENSMUST00000133485.8, ENSMUST00000135814.2, ENSMUST00000138186.2, ENSMUST00000153684.8
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGTAGAAGACACTCATTTCCAAATACGTCTCCCTTGGGAATTGTaGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: RVEDTHFQIRLPWEL*PSSGDSLLTPREGW Trigger: CCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| 3UTR CCA 90 bp | TCCAGCCTCCCCGACCCAACTGTAATGGGGTCAACTTCAAGTCCATaGAGCAGGAAGGACAGAGTAGAAGACACTCATTTCCAAATACGT | + |
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Preference number: 1 (lower is better) Translates to: SSLPDPTVMGSTSSP*SRKDRVEDTHFQIR Trigger: ACGTATTTGGAAATGAGTGTCTTCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGGTCGGGGAGGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| 3UTR CAA 90 bp | GACAGAGTAGAAGACACTCATTTCCAAATACGTCTCCCTTGGGAATaGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: DRVEDTHFQIRLPWE*WPSSGDSLLTPREG Trigger: GCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACTCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCTCACTCCACAGGCTTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATCATTACATCCCAGTTTaGGCCCTGGACCTGCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: PSSLHRLWYSTSEQPRSNHYIPV*ALDLQV Trigger: CACTTGCAGGTCCAGGGCTCAAACTGGGATGTAATG...ATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAAGCCTGTGGAGTGAGGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGACCTCAACTTCAAGTCCATaGAGCAGGAAGGACAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: GYRVDWTEILSTDPASPTSTSSP*SRKDRV Trigger: TACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGA...GGTCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCTTTATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCAACAGTAGAGGCGAGTGCTAATTaGCACCTTTTTCTTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LCFIYNTQAVCLSSRPTVEASAN*HLFLSF Trigger: GAAGGAAAGAAAAAGGTGTCAATTAGCACTCGCCTC...TACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGATCAACTTCAAGTCCATaGAGCAGGAAGGACAGAGTA | + |
|
Preference number: 2 (lower is better) Translates to: KGTGLTGQRFCLQIQPPRSTSSP*SRKDRV Trigger: TACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGA...TCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCAACAGTATTAAAAACGGGGTACAGGGTTGACTaGACAGAGATTCTGTCTACA | + |
|
Preference number: 2 (lower is better) Translates to: IYNTQAVCLSSRPTVLKTGYRVD*TEILST Trigger: TGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCC...CGTTTTTAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| 3UTR-3UTR CCA 90 bp | TATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCAACAGTATTAAAAACTCAACTTCAAGTCCATaGAGCAGGAAGGACAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: YLQHAGRLSEQPANSIKNSTSSP*SRKDRV Trigger: TACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGA...GTTTTTAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| 3UTR CCA 72 bp | CCAAATACGTCTCCCTTGGGAATTGTGGCCCTCAAGTaGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PNTSPLGIVALK*GQPPHSKGRLG Trigger: CCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| 3UTR TCA 72 bp | TCCTTCCTCACTCCACAGGCTTTGGTACTCCACCTCTaGGCAACCTCGCTCAAATGGGGGAGCCCCAAATTA | + |
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Preference number: 3 (lower is better) Translates to: SFLTPQALVLHL*ATSLKWGSPKL Trigger: TAATTTGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAAGCCTGTGGAGTGAGGAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| 3UTR CCA 72 bp | GACACTCATTTCCAAATACGTCTCCCTTGGGAATTGTaGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: DTHFQIRLPWEL*PSSGDSLLTPR Trigger: CCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| 3UTR CCA 72 bp | CCCGACCCAACTGTAATGGGGTCAACTTCAAGTCCATaGAGCAGGAAGGACAGAGTAGAAGACACTCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: PDPTVMGSTSSP*SRKDRVEDTHF Trigger: GAAATGAGTGTCTTCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGGTCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| 3UTR-3UTR CAA 90 bp | ATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCAACAGTATTAAAAACGGAAAAGGGTACAGGGTaGACTGGACAGAGATTCTGT | + |
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Preference number: 3 (lower is better) Translates to: IYNTQAVCLSSRPTVLKTEKGTG*TGQRFC Trigger: ACAGAATCTCTGTCCAGTCAACCCTGTACCCTTTTC...CGTTTTTAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| 3UTR-3UTR CAA 90 bp | GTAAAACACAAGAGCCCACTCTGCTTTATTTACAACACGCAGGCCGTCTGTCTGGAAAAGGGTACAGGGTaGACTGGACAGAGATTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VKHKSPLCFIYNTQAVCLEKGTG*TGQRFC Trigger: ACAGAATCTCTGTCCAGTCAACCCTGTACCCTTTTC...CAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAGTGGGCTCTTGTGTTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | GGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCCTGAGTGGGAGAGGTCCCCCTaGGACAGCGGCACTGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GPQVGTASSLQGKAGDPEWERSP*DSGTGA Trigger: CGCCCCAGTGCCGCTGTCCCAGGGGGACCTCTCCCA...CTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | GGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCCTGAGAGGAGGGCCAGGAGGTaGGAGTCTATCTCCCCGATC | + |
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Preference number: 4 (lower is better) Translates to: GPQVGTASSLQGKAGDPERRARR*ESISPI Trigger: GATCGGGGAGATAGACTCCCACCTCCTGGCCCTCCT...CTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | ATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCCCCATCCCCAGGAGCTaGTCGAGGTCTCCGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IVALKWGQPPHSKGRLGTPIPRS*SRSPKH Trigger: GTGCTTCGGAGACCTCGACCAGCTCCTGGGGATGGG...GGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR GCA 90 bp | ATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCACGTCCCACAGAGGCTaGACTCAATCATGGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: IVALKWGQPPHSKGRLGTTSHRG*TQSWAA Trigger: GGCGGCCCATGATTGAGTGCAGCCTCTGTGGGACGT...GGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | GAATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGAGGCTGCACTCAATCATaGGCCGCCCCGCAAAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: ELWPSSGDSLLTPREGWGGCTQS*AAPQRA Trigger: AGCCCTTTGCGGGGCGGCCCATGATTGAGTGCAGCC...TCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | TTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCCAGGGTTCTCCAGATTTaGGGAGACCCCCTAACCGCC | + |
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Preference number: 4 (lower is better) Translates to: LWPSSGDSLLTPREGWGPRVLQI*GDPLTA Trigger: GGCGGTTAGGGGGTCTCCCCAAATCTGGAGAACCCT...GGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | AAGGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGATGGGAGAGGTCCCCCTaGGACAGCGGCACTGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: KGTGLTGQRFCLQIQPPRWERSP*DSGTGA Trigger: CGCCCCAGTGCCGCTGTCCCAGGGGGACCTCTCCCA...TCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | ACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGACCCAACTGTAATGGGTGGGAGAGGTCCCCCTaGGACAGCGGCACTGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: TGQRFCLQIQPPRPNCNGWERSP*DSGTGA Trigger: CGCCCCAGTGCCGCTGTCCCAGGGGGACCTCTCCCA...CCCATTACAGTTGGGTCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | GAGCCCACTCTGCTTTATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCCCCATCCCCAGGAGCTaGTCGAGGTCTCCGAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: EPTLLYLQHAGRLSEQPAPIPRS*SRSPKH Trigger: GTGCTTCGGAGACCTCGACCAGCTCCTGGGGATGGG...GGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAGTGGGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR TCA 90 bp | TTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCCCCAGGAGTCGTCACCTaGTTCTACCATGATGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LWPSSGDSLLTPREGWGPPGVVT*FYHDVL Trigger: GAGGACATCATGGTAGAATCAGGTGACGACTCCTGG...GGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR GCA 90 bp | CACAGGCTTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATGGGGGAGCCCCAACGTCCCACAGAGGCTaGACTCAATCATGGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: HRLWYSTSEQPRSNGGAPTSHRG*TQSWAA Trigger: GGCGGCCCATGATTGAGTGCAGCCTCTGTGGGACGT...TGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAAGCCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | GACACTCATTTCCAAATACGTCTCCCTTGGGAATTGTGGCCCTCAAGTGGGGACTGGGAGAGGTCCCCCTaGGACAGCGGCACTGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: DTHFQIRLPWELWPSSGDWERSP*DSGTGA Trigger: CGCCCCAGTGCCGCTGTCCCAGGGGGACCTCTCCCA...GTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | TTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCCGCCAGCCCCACCTCCTaGTCCCAACTTTCTATTCTT | + |
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Preference number: 4 (lower is better) Translates to: LWPSSGDSLLTPREGWGPASPTS*SQLSIL Trigger: AAGAATAGAAAGTTGGGACCAGGAGGTGGGGCTGGC...GGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | GAGCCCACTCTGCTTTATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCAGGAGGGCCAGGAGGTaGGAGTCTATCTCCCCGATC | + |
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Preference number: 4 (lower is better) Translates to: EPTLLYLQHAGRLSEQPARRARR*ESISPI Trigger: GATCGGGGAGATAGACTCCCACCTCCTGGCCCTCCT...GGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAGTGGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR TCA 90 bp | TTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCCGCTTCTTGCTCTTCTTaGTTCGAGACCGCTTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LWPSSGDSLLTPREGWGPASCSS*FETAFP Trigger: GGGAAAAGCGGTCTCGAATCAAGAAGAGCAAGAAGC...GGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR GCA 90 bp | CACAGGCTTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATGGGGGAGCCCCAGGGGGCCGGGAAGTATaGGTCAATGATGTGGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: HRLWYSTSEQPRSNGGAPGGREV*VNDVGE Trigger: CTCTCCCACATCATTGACGCATACTTCCCGGCCCCC...TGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAAGCCTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR GCA 90 bp | TTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCCGGCTTGTTTCTGTGCTaGCCACATCTTTGCCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: LWPSSGDSLLTPREGWGPGLFLC*PHLCLH Trigger: GTGAAGGCAAAGATGTGGGCAGCACAGAAACAAGCC...GGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR GCA 90 bp | GGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGACCACGTCCCACAGAGGCTaGACTCAATCATGGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: GYRVDWTEILSTDPASPTTSHRG*TQSWAA Trigger: GGCGGCCCATGATTGAGTGCAGCCTCTGTGGGACGT...GGTCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | GGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCCTGAGGTGGAGATGCCACTTTaGGCCCATCCAGATCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: GPQVGTASSLQGKAGDPEVEMPL*AHPDQK Trigger: TTTTTGATCTGGATGGGCCCAAAGTGGCATCTCCAC...CTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | ATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCAACAGTATTAAAAACGTGGGAGAGGTCCCCCTaGGACAGCGGCACTGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: IYNTQAVCLSSRPTVLKTWERSP*DSGTGA Trigger: CGCCCCAGTGCCGCTGTCCCAGGGGGACCTCTCCCA...CGTTTTTAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | CCTCACTCCAAGGGAAGGCTGGGGACCCTGAGGCTCAGTTCCCAAGTAATGTCATCCTTCTTTCGAGGCTaGGAGAGGTCCCCCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: PHSKGRLGTLRLSSQVMSSFFRG*ERSPWD Trigger: GTCCCAGGGGGACCTCTCCCAGCCTCGAAAGAAGGA...TGACATTACTTGGGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR GCA 90 bp | GGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGACCGGGAGAGAGTGGAGATaGCACTTTGGGCCCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: GYRVDWTEILSTDPASPTGREWR*HFGPIQ Trigger: CTGGATGGGCCCAAAGTGGCATCTCCACTCTCTCCC...GGTCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR GCA 90 bp | CCTCACTCCAAGGGAAGGCTGGGGACCCTGAGGCTCAGTTCCCAAGTAATGTCAGGGGGCCGGGAAGTATaGGTCAATGATGTGGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: PHSKGRLGTLRLSSQVMSGGREV*VNDVGE Trigger: CTCTCCCACATCATTGACGCATACTTCCCGGCCCCC...TGACATTACTTGGGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | AAAGGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGGCGGATCTTCGGGACTaGGCTCCGCCATGGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: KGYRVDWTEILSTDPASPADLRD*APPWLP Trigger: TGGAAGCCATGGCGGAGCCCAGTCCCGAAGATCCGC...CGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 |
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| CDS-3UTR CCA 90 bp | TTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCCGTGGAGATGCCACTTTaGGCCCATCCAGATCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LWPSSGDSLLTPREGWGPVEMPL*AHPDQK Trigger: TTTTTGATCTGGATGGGCCCAAAGTGGCATCTCCAC...GGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAAATACGTCTCCCTTGGGAATTGTGGCCCTCAAGTGGGGACAGCCTCCTCTCCTTCTTTCGAGGCTaGGAGAGGTCCCCCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FQIRLPWELWPSSGDSLLSFFRG*ERSPWD Trigger: GTCCCAGGGGGACCTCTCCCAGCCTCGAAAGAAGGA...GAGGAGGCTGTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGCCCATCCCCAGGAGCTaGTCGAGGTCTCCGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KGYRVDWTEILSTDPASPPIPRS*SRSPKH Trigger: GTGCTTCGGAGACCTCGACCAGCTCCTGGGGATGGG...CGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGCTTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATGGGGGAGCCCCAAAGGGTTCTCCAGATTTaGGGAGACCCCCTAACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TGFGTPPLSNLAQMGEPQRVLQI*GDPLTA Trigger: GGCGGTTAGGGGGTCTCCCCAAATCTGGAGAACCCT...TTGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAAGCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR TCA 90 bp | AATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCTTTTCTCCGGTGGCTaGGTCTCTGGTTTAAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NCGPQVGTASSLQGKAGDLFSGG*VSGLRV Trigger: GACTCTTAAACCAGAGACTCAGCCACCGGAGAAAAG...GTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 |
||
| CDS-3UTR TCA 90 bp | GGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCCTGAGCAAAAAGAGAGTCCTTaGGCTTCATCTTCTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPQVGTASSLQGKAGDPEQKESP*ASSSQA Trigger: TGCTTGAGAAGATGAAGCTCAAGGACTCTCTTTTTG...CTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 |
||
| CDS-3UTR CCA 90 bp | GGGGACCCTGAGGCTCAGTTCCCAAGTAATGTCACAAGTTCCAGCCTTAGTGATGCGGATCTTCGGGACTaGGCTCCGCCATGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GDPEAQFPSNVTSSSLSDADLRD*APPWLP Trigger: TGGAAGCCATGGCGGAGCCCAGTCCCGAAGATCCGC...ATCACTAAGGCTGGAACTTGTGACATTACTTGGGAACTGAGCCTCAGGGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 |
||
| CDS-3UTR CCA 90 bp | AAAGGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGTCCTTCTTTCGAGGCTaGGAGAGGTCCCCCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KGYRVDWTEILSTDPASPSFFRG*ERSPWD Trigger: GTCCCAGGGGGACCTCTCCCAGCCTCGAAAGAAGGA...CGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCCACTCTGCTTTATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCGCCAGCCCCACCTCCTaGTCCCAACTTTCTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EPTLLYLQHAGRLSEQPAASPTS*SQLSIL Trigger: AAGAATAGAAAGTTGGGACCAGGAGGTGGGGCTGGC...GGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAGTGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | GGGGACCCTGAGGCTCAGTTCCCAAGTAATGTCACAAGTTCCAGCCTTAGTGATCCCATCCCCAGGAGCTaGTCGAGGTCTCCGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GDPEAQFPSNVTSSSLSDPIPRS*SRSPKH Trigger: GTGCTTCGGAGACCTCGACCAGCTCCTGGGGATGGG...ATCACTAAGGCTGGAACTTGTGACATTACTTGGGAACTGAGCCTCAGGGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCCTCACTCCACAGGCTTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATAGGAGGGCCAGGAGGTaGGAGTCTATCTCCCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: PSSLHRLWYSTSEQPRSNRRARR*ESISPI Trigger: GATCGGGGAGATAGACTCCCACCTCCTGGCCCTCCT...ATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAAGCCTGTGGAGTGAGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGAGGAGGGCCAGGAGGTaGGAGTCTATCTCCCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: KGYRVDWTEILSTDPASPRRARR*ESISPI Trigger: GATCGGGGAGATAGACTCCCACCTCCTGGCCCTCCT...CGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGACCCAACTGTAATGGGAGGAGGGCCAGGAGGTaGGAGTCTATCTCCCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: TGQRFCLQIQPPRPNCNGRRARR*ESISPI Trigger: GATCGGGGAGATAGACTCCCACCTCCTGGCCCTCCT...CCCATTACAGTTGGGTCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | CGACCCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTGGCTGCACTCAATCATaGGCCGCCCCGCAAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPNCNGVNFKSMEQEGQSGCTQS*AAPQRA Trigger: AGCCCTTTGCGGGGCGGCCCATGATTGAGTGCAGCC...ACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAAGGCTGGGGACCCTGAGGCTCAGTTCCCAAGTAATGTCACAAGTTCCAGGGTTCTCCAGATTTaGGGAGACCCCCTAACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGKAGDPEAQFPSNVTSSRVLQI*GDPLTA Trigger: GGCGGTTAGGGGGTCTCCCCAAATCTGGAGAACCCT...GGAACTTGTGACATTACTTGGGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCCTCACTCCACAGGCTTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATGGGAGAGAGTGGAGATaGCACTTTGGGCCCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSSLHRLWYSTSEQPRSNGREWR*HFGPIQ Trigger: CTGGATGGGCCCAAAGTGGCATCTCCACTCTCTCCC...ATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAAGCCTGTGGAGTGAGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGACCCAACTGTAATGGGGGGGGCCGGGAAGTATaGGTCAATGATGTGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGQRFCLQIQPPRPNCNGGGREV*VNDVGE Trigger: CTCTCCCACATCATTGACGCATACTTCCCGGCCCCC...CCCATTACAGTTGGGTCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGT 56% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGAGGGGGCCGGGAAGTATaGGTCAATGATGTGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KGTGLTGQRFCLQIQPPRGGREV*VNDVGE Trigger: CTCTCCCACATCATTGACGCATACTTCCCGGCCCCC...TCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGCTTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATGGGGGAGCCCCAGGCTTGTTTCTGTGCTaGCCACATCTTTGCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HRLWYSTSEQPRSNGGAPGLFLC*PHLCLH Trigger: GTGAAGGCAAAGATGTGGGCAGCACAGAAACAAGCC...TGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAAGCCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | CGACCCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTACGTCCCACAGAGGCTaGACTCAATCATGGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RPNCNGVNFKSMEQEGQSTSHRG*TQSWAA Trigger: GGCGGCCCATGATTGAGTGCAGCCTCTGTGGGACGT...ACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAAGGCTGGGGACCCTGAGGCTCAGTTCCCAAGTAATGTCACAAGTTCCGCAGACGAGAAAAAGTaGACCTTGGGGGTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGKAGDPEAQFPSNVTSSADEKK*TLGVLA Trigger: AGCCAGGACCCCCAAGGTCCACTTTTTCTCGTCTGC...GGAACTTGTGACATTACTTGGGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000018716.10 |
||
| CDS-3UTR CCA 90 bp | GGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGACCGCCAGCCCCACCTCCTaGTCCCAACTTTCTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GYRVDWTEILSTDPASPTASPTS*SQLSIL Trigger: AAGAATAGAAAGTTGGGACCAGGAGGTGGGGCTGGC...GGTCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATGGGGGAGCCCCAAATTAAACCCATCCCCAGGAGCTaGTCGAGGTCTCCGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FGTPPLSNLAQMGEPQIKPIPRS*SRSPKH Trigger: GTGCTTCGGAGACCTCGACCAGCTCCTGGGGATGGG...TTTAATTTGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | CACAGGCTTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATGGGGGAGCCCCACTAGCATCTCCATCTTaGCTTGTTTCTGTGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HRLWYSTSEQPRSNGGAPLASPS*LVSVLP Trigger: GGGCAGCACAGAAACAAGCCAAGATGGAGATGCTAG...TGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAAGCCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCCACTCTGCTTTATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCCTAGCATCTCCATCTTaGCTTGTTTCTGTGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EPTLLYLQHAGRLSEQPALASPS*LVSVLP Trigger: GGGCAGCACAGAAACAAGCCAAGATGGAGATGCTAG...GGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAGTGGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | AATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACTCTATCTCCCCGATCTaGCTTTTTCAACTTCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NCGPQVGTASSLQGKAGDSISPI*LFQLPL Trigger: AAGCGGAAGTTGAAAAAGGCAGATCGGGGAGATAGA...GTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | GGGAATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGCTGGCCGAAGTTCCTTaGATTTCTGGCAATAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GNCGPQVGTASSLQGKAGLAEVP*ISGNKR Trigger: TCTTTTATTGCCAGAAATGCAAGGAACTTCGGCCAG...CCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAAGGCTGGGGACCCTGAGGCTCAGTTCCCAAGTAATGTCACAAGTTCCGCTAGAGCCAGAGGCTaGCCAATCGCTTTCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGKAGDPEAQFPSNVTSSARARG*PIAFLF Trigger: AAAGAGGAAAGCGATTGGCCAGCCTCTGGCTCTAGC...GGAACTTGTGACATTACTTGGGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018716.10 |
||
| CDS-3UTR CCA 90 bp | AAAGGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGACTCTCACCTCGCAATaGAGAGCTAGAGCCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGYRVDWTEILSTDPASPTLTSQ*RARARG Trigger: GCCTCTGGCTCTAGCTCTCCATTGCGAGGTGAGAGT...CGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018716.10 |
||
| CDS-3UTR CCA 90 bp | TTCCAAATACGTCTCCCTTGGGAATTGTGGCCCTCAAGTGGGGACAGCCTCCTCGCCAGCCCCACCTCCTaGTCCCAACTTTCTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQIRLPWELWPSSGDSLLASPTS*SQLSIL Trigger: AAGAATAGAAAGTTGGGACCAGGAGGTGGGGCTGGC...GAGGAGGCTGTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | CCTCACTCCAAGGGAAGGCTGGGGACCCTGAGGCTCAGTTCCCAAGTAATGTCACTAGCATCTCCATCTTaGCTTGTTTCTGTGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PHSKGRLGTLRLSSQVMSLASPS*LVSVLP Trigger: GGGCAGCACAGAAACAAGCCAAGATGGAGATGCTAG...TGACATTACTTGGGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | GTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTAGAAGACACTGGCTGCACTCAATCATaGGCCGCCCCGCAAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VMGSTSSPWSRKDRVEDTGCTQS*AAPQRA Trigger: AGCCCTTTGCGGGGCGGCCCATGATTGAGTGCAGCC...AGTGTCTTCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | CCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTAGAAGGCTGCACTCAATCATaGGCCGCCCCGCAAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTVMGSTSSPWSRKDRVEGCTQS*AAPQRA Trigger: AGCCCTTTGCGGGGCGGCCCATGATTGAGTGCAGCC...TTCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | GGGGACCCTGAGGCTCAGTTCCCAAGTAATGTCACAAGTTCCAGCCTTAGTGATAGGGTTCTCCAGATTTaGGGAGACCCCCTAACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GDPEAQFPSNVTSSSLSDRVLQI*GDPLTA Trigger: GGCGGTTAGGGGGTCTCCCCAAATCTGGAGAACCCT...ATCACTAAGGCTGGAACTTGTGACATTACTTGGGAACTGAGCCTCAGGGTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGGAAGGCTGGGGACCCTGAGGCTCAGTTCCCAAGTAATGTCACAAGTTCCCTTTTCTCCGGTGGCTaGGTCTCTGGTTTAAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QGKAGDPEAQFPSNVTSSLFSGG*VSGLRV Trigger: GACTCTTAAACCAGAGACTCAGCCACCGGAGAAAAG...GGAACTTGTGACATTACTTGGGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 |
||
| CDS-3UTR TCA 90 bp | GGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGACCTGGGTAGGACCTGATTaGACTGCCCTTCTCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GYRVDWTEILSTDPASPTWVGPD*TALLFD Trigger: ATCAAAGAGAAGGGCAGTTCAATCAGGTCCTACCCA...GGTCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018716.10 |
||
| CDS-3UTR TCA 90 bp | TTCCAAATACGTCTCCCTTGGGAATTGTGGCCCTCAAGTGGGGACAGCCTCCTCGGAAGTATGCGTCAATaGTGTGGGAGAGAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FQIRLPWELWPSSGDSLLGSMRQ*CGREWR Trigger: TCTCCACTCTCTCCCACATCATTGACGCATACTTCC...GAGGAGGCTGTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR TCA 90 bp | AAGGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGACCAGGAGTCGTCACCTaGTTCTACCATGATGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KGTGLTGQRFCLQIQPPRPGVVT*FYHDVL Trigger: GAGGACATCATGGTAGAATCAGGTGACGACTCCTGG...TCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | ATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCAACAGTATTAAAAACGGGGGGCCGGGAAGTATaGGTCAATGATGTGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IYNTQAVCLSSRPTVLKTGGREV*VNDVGE Trigger: CTCTCCCACATCATTGACGCATACTTCCCGGCCCCC...CGTTTTTAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAAT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | GGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGACCCTTGGCTTGTTTCTGTaGTGCCCACATCTTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GYRVDWTEILSTDPASPTLGLFL*CPHLCL Trigger: AAGGCAAAGATGTGGGCAGCACAGAAACAAGCCAAG...GGTCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | CCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTAGAAACGTCCCACAGAGGCTaGACTCAATCATGGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTVMGSTSSPWSRKDRVETSHRG*TQSWAA Trigger: GGCGGCCCATGATTGAGTGCAGCCTCTGTGGGACGT...TTCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | GAATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACTGGCCGAAGTTCCTTaGATTTCTGGCAATAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ELWPSSGDSLLTPREGWGLAEVP*ISGNKR Trigger: TCTTTTATTGCCAGAAATGCAAGGAACTTCGGCCAG...TCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | CCTCACTCCAAGGGAAGGCTGGGGACCCTGAGGCTCAGTTCCCAAGTAATGTCAGTGGAGATGCCACTTTaGGCCCATCCAGATCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PHSKGRLGTLRLSSQVMSVEMPL*AHPDQK Trigger: TTTTTGATCTGGATGGGCCCAAAGTGGCATCTCCAC...TGACATTACTTGGGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | GTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTAGAAGACACTTCCTTCTTTCGAGGCTaGGAGAGGTCCCCCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VMGSTSSPWSRKDRVEDTSFFRG*ERSPWD Trigger: GTCCCAGGGGGACCTCTCCCAGCCTCGAAAGAAGGA...AGTGTCTTCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATGGGGGAGCCCCAAATTAAAAGGGTTCTCCAGATTTaGGGAGACCCCCTAACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FGTPPLSNLAQMGEPQIKRVLQI*GDPLTA Trigger: GGCGGTTAGGGGGTCTCCCCAAATCTGGAGAACCCT...TTTAATTTGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| 3UTR CAA 72 bp | GAAGACACTCATTTCCAAATACGTCTCCCTTGGGAATaGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EDTHFQIRLPWE*WPSSGDSLLTP Trigger: TGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGCTTTATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCAACAGTAGGAAGTATGCGTCAATaGTGTGGGAGAGAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCFIYNTQAVCLSSRPTVGSMRQ*CGREWR Trigger: TCTCCACTCTCTCCCACATCATTGACGCATACTTCC...TACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGACCCAACTGTAATGGGGCTTCTTGCTCTTCTTaGTTCGAGACCGCTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TGQRFCLQIQPPRPNCNGASCSS*FETAFP Trigger: GGGAAAAGCGGTCTCGAATCAAGAAGAGCAAGAAGC...CCCATTACAGTTGGGTCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR TCA 90 bp | CGACCCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTCCAGGAGTCGTCACCTaGTTCTACCATGATGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPNCNGVNFKSMEQEGQSPGVVT*FYHDVL Trigger: GAGGACATCATGGTAGAATCAGGTGACGACTCCTGG...ACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATGGGGGAGCCCCAAATTAAAGCCATCACTGTCTGCTaGACTCTCACCTCGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: FGTPPLSNLAQMGEPQIKAITVC*TLTSQW Trigger: CCATTGCGAGGTGAGAGTGCAGCAGACAGTGATGGC...TTTAATTTGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018716.10 |
||
| CDS-3UTR GCA 90 bp | GTAAAACACAAGAGCCCACTCTGCTTTATTTACAACACGCAGGCCGTCTGTCTGGGGAGAGAGTGGAGATaGCACTTTGGGCCCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VKHKSPLCFIYNTQAVCLGREWR*HFGPIQ Trigger: CTGGATGGGCCCAAAGTGGCATCTCCACTCTCTCCC...CAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAGTGGGCTCTTGTGTTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000153684.8 |
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| CDS-3UTR GCA 90 bp | CCTCACTCCAAGGGAAGGCTGGGGACCCTGAGGCTCAGTTCCCAAGTAATGTCATCTATCTCCCCGATCTaGCTTTTTCAACTTCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PHSKGRLGTLRLSSQVMSSISPI*LFQLPL Trigger: AAGCGGAAGTTGAAAAAGGCAGATCGGGGAGATAGA...TGACATTACTTGGGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATGGGGGAGCCCCAAATTAAAAGAAAAAGTGGACCTTaGGGGTCCTGGCTGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FGTPPLSNLAQMGEPQIKRKSGP*GSWLGR Trigger: CCTACCCAGCCAGGACCCCCAAGGTCCACTTTTTCT...TTTAATTTGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000018716.10 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAAGGCTGGGGACCCTGAGGCTCAGTTCCCAAGTAATGTCACAAGTTCCTATGCGTCAATGATGTaGGAGAGAGTGGAGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGKAGDPEAQFPSNVTSSYASMM*ERVEMP Trigger: TGGCATCTCCACTCTCTCCCACATCATTGACGCATA...GGAACTTGTGACATTACTTGGGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | AGTAGAAGACACTCATTTCCAAATACGTCTCCCTTGGGAATTGTGGCCCTCAAGTCCTTCTTTCGAGGCTaGGAGAGGTCCCCCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SRRHSFPNTSPLGIVALKSFFRG*ERSPWD Trigger: GTCCCAGGGGGACCTCTCCCAGCCTCGAAAGAAGGA...CTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR TCA 90 bp | ATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCAACAGTATTAAAAACGCCAGGAGTCGTCACCTaGTTCTACCATGATGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IYNTQAVCLSSRPTVLKTPGVVT*FYHDVL Trigger: GAGGACATCATGGTAGAATCAGGTGACGACTCCTGG...CGTTTTTAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | GACACTCATTTCCAAATACGTCTCCCTTGGGAATTGTGGCCCTCAAGTGGGGACGGCTTGTTTCTGTGCTaGCCACATCTTTGCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: DTHFQIRLPWELWPSSGDGLFLC*PHLCLH Trigger: GTGAAGGCAAAGATGTGGGCAGCACAGAAACAAGCC...GTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCCTCACTCCACAGGCTTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATCTTGGCTTGTTTCTGTaGTGCCCACATCTTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSSLHRLWYSTSEQPRSNLGLFL*CPHLCL Trigger: AAGGCAAAGATGTGGGCAGCACAGAAACAAGCCAAG...ATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAAGCCTGTGGAGTGAGGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR GCA 90 bp | ACAGGCTTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATGGGGGAGCCCCAACTGGCCGAAGTTCCTTaGATTTCTGGCAATAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGFGTPPLSNLAQMGEPQLAEVP*ISGNKR Trigger: TCTTTTATTGCCAGAAATGCAAGGAACTTCGGCCAG...TTGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAAGCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | ACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGACCCAACTGTAATGGGGTGGAGATGCCACTTTaGGCCCATCCAGATCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TGQRFCLQIQPPRPNCNGVEMPL*AHPDQK Trigger: TTTTTGATCTGGATGGGCCCAAAGTGGCATCTCCAC...CCCATTACAGTTGGGTCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| 3UTR CAA 72 bp | CAGAGTAGAAGACACTCATTTCCAAATACGTCTCCCTaGGGAATTGTGGCCCTCAAGTGGGGACAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSRRHSFPNTSP*GIVALKWGQPP Trigger: AGGAGGCTGTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| 3UTR CAA 72 bp | TTGAGCCCTGGACCTGCAAGTGAAAAGGGTACAGGGTaGACTGGACAGAGATTCTGTCTACAGATCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPGPASEKGTG*TGQRFCLQIQP Trigger: AGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCCTTTTCACTTGCAGGTCCAGGGCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR TCA 90 bp | TATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCAACAGTATTAAAAACTGGCTGGGTAGGACCTaGTTGAACTGCCCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YLQHAGRLSEQPANSIKNWLGRT*LNCPSL Trigger: AAGAGAAGGGCAGTTCAATCAGGTCCTACCCAGCCA...GTTTTTAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018716.10 |
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| CDS-3UTR TCA 90 bp | TTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATGGGGGAGCCCCAAATTAAAGGAAGTATGCGTCAATaGTGTGGGAGAGAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FGTPPLSNLAQMGEPQIKGSMRQ*CGREWR Trigger: TCTCCACTCTCTCCCACATCATTGACGCATACTTCC...TTTAATTTGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR TCA 90 bp | TTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATGGGGGAGCCCCAAATTAAAGCTTCTTGCTCTTCTTaGTTCGAGACCGCTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FGTPPLSNLAQMGEPQIKASCSS*FETAFP Trigger: GGGAAAAGCGGTCTCGAATCAAGAAGAGCAAGAAGC...TTTAATTTGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR TCA 90 bp | ATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCAACAGTATTAAAAACGGCTTCTTGCTCTTCTTaGTTCGAGACCGCTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IYNTQAVCLSSRPTVLKTASCSS*FETAFP Trigger: GGGAAAAGCGGTCTCGAATCAAGAAGAGCAAGAAGC...CGTTTTTAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGAAGACACTCATTTCCAAATACGTCTCCCTTGGGAATTGTGGCCCTCAAGCCAGCCATCACTGTCTaGTGCACTCTCACCTCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRRHSFPNTSPLGIVALKPAITV*CTLTSQ Trigger: TTGCGAGGTGAGAGTGCAGCAGACAGTGATGGCTGG...CTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018716.10 |
||
| CDS-3UTR GCA 90 bp | GACACTCATTTCCAAATACGTCTCCCTTGGGAATTGTGGCCCTCAAGTGGGGACCTTGGCTTGTTTCTGTaGTGCCCACATCTTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DTHFQIRLPWELWPSSGDLGLFL*CPHLCL Trigger: AAGGCAAAGATGTGGGCAGCACAGAAACAAGCCAAG...GTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | CGACCCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTCTTGGCTTGTTTCTGTaGTGCCCACATCTTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPNCNGVNFKSMEQEGQSLGLFL*CPHLCL Trigger: AAGGCAAAGATGTGGGCAGCACAGAAACAAGCCAAG...ACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | CGACCCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTGTGGAGATGCCACTTTaGGCCCATCCAGATCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RPNCNGVNFKSMEQEGQSVEMPL*AHPDQK Trigger: TTTTTGATCTGGATGGGCCCAAAGTGGCATCTCCAC...ACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGGTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | GACACTCATTTCCAAATACGTCTCCCTTGGGAATTGTGGCCCTCAAGTGGGGACTATGCGTCAATGATGTaGGAGAGAGTGGAGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DTHFQIRLPWELWPSSGDYASMM*ERVEMP Trigger: TGGCATCTCCACTCTCTCCCACATCATTGACGCATA...GTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | GGGGACCCTGAGGCTCAGTTCCCAAGTAATGTCACAAGTTCCAGCCTTAGTGATTATGCGTCAATGATGTaGGAGAGAGTGGAGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GDPEAQFPSNVTSSSLSDYASMM*ERVEMP Trigger: TGGCATCTCCACTCTCTCCCACATCATTGACGCATA...ATCACTAAGGCTGGAACTTGTGACATTACTTGGGAACTGAGCCTCAGGGTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR TCA 90 bp | CCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTAGAAGGAAGTATGCGTCAATaGTGTGGGAGAGAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTVMGSTSSPWSRKDRVEGSMRQ*CGREWR Trigger: TCTCCACTCTCTCCCACATCATTGACGCATACTTCC...TTCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR TCA 90 bp | CCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTAGAAGCTTCTTGCTCTTCTTaGTTCGAGACCGCTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PTVMGSTSSPWSRKDRVEASCSS*FETAFP Trigger: GGGAAAAGCGGTCTCGAATCAAGAAGAGCAAGAAGC...TTCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR TCA 90 bp | AGTAGAAGACACTCATTTCCAAATACGTCTCCCTTGGGAATTGTGGCCCTCAAGCCAGGAGTCGTCACCTaGTTCTACCATGATGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRRHSFPNTSPLGIVALKPGVVT*FYHDVL Trigger: GAGGACATCATGGTAGAATCAGGTGACGACTCCTGG...CTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | GACACTCATTTCCAAATACGTCTCCCTTGGGAATTGTGGCCCTCAAGTGGGGACTCTATCTCCCCGATCTaGCTTTTTCAACTTCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DTHFQIRLPWELWPSSGDSISPI*LFQLPL Trigger: AAGCGGAAGTTGAAAAAGGCAGATCGGGGAGATAGA...GTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | CGACCCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTTCTATCTCCCCGATCTaGCTTTTTCAACTTCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPNCNGVNFKSMEQEGQSSISPI*LFQLPL Trigger: AAGCGGAAGTTGAAAAAGGCAGATCGGGGAGATAGA...ACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGGTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | CCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTAGAAGGCTTGTTTCTGTGCTaGCCACATCTTTGCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PTVMGSTSSPWSRKDRVEGLFLC*PHLCLH Trigger: GTGAAGGCAAAGATGTGGGCAGCACAGAAACAAGCC...TTCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR GCA 90 bp | TATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCAACAGTATTAAAAACGGCTTGTTTCTGTGCTaGCCACATCTTTGCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YLQHAGRLSEQPANSIKNGLFLC*PHLCLH Trigger: GTGAAGGCAAAGATGTGGGCAGCACAGAAACAAGCC...GTTTTTAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR GCA 90 bp | AAGGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGACTGGCCGAAGTTCCTTaGATTTCTGGCAATAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KGTGLTGQRFCLQIQPPRLAEVP*ISGNKR Trigger: TCTTTTATTGCCAGAAATGCAAGGAACTTCGGCCAG...TCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR GCA 90 bp | CCCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTAGATCTATCTCCCCGATCTaGCTTTTTCAACTTCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PNCNGVNFKSMEQEGQSRSISPI*LFQLPL Trigger: AAGCGGAAGTTGAAAAAGGCAGATCGGGGAGATAGA...TCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | GTAAAACACAAGAGCCCACTCTGCTTTATTTACAACACGCAGGCCGTCTGTCTGTATGCGTCAATGATGTaGGAGAGAGTGGAGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VKHKSPLCFIYNTQAVCLYASMM*ERVEMP Trigger: TGGCATCTCCACTCTCTCCCACATCATTGACGCATA...CAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAGTGGGCTCTTGTGTTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | CAGGAAGGACAGAGTAGAAGACACTCATTTCCAAATACGTCTCCCTTGGGAATTGCCAGCCCCACCTCCTaGTCCCAACTTTCTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QEGQSRRHSFPNTSPLGIASPTS*SQLSIL Trigger: AAGAATAGAAAGTTGGGACCAGGAGGTGGGGCTGGC...AATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACTCTGTCCTTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR TCA 90 bp | AGGAAGGACAGAGTAGAAGACACTCATTTCCAAATACGTCTCCCTTGGGAATTGGGAAGTATGCGTCAATaGTGTGGGAGAGAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKDRVEDTHFQIRLPWELGSMRQ*CGREWR Trigger: TCTCCACTCTCTCCCACATCATTGACGCATACTTCC...CAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACTCTGTCCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGAAGACACTCATTTCCAAATACGTCTCCCTTGGGAATTGTGGCCCTCAAGTATGCGTCAATGATGTaGGAGAGAGTGGAGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRRHSFPNTSPLGIVALKYASMM*ERVEMP Trigger: TGGCATCTCCACTCTCTCCCACATCATTGACGCATA...CTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CCA 90 bp | AGGAAGGACAGAGTAGAAGACACTCATTTCCAAATACGTCTCCCTTGGGAATTGCTAGCATCTCCATCTTaGCTTGTTTCTGTGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RKDRVEDTHFQIRLPWELLASPS*LVSVLP Trigger: GGGCAGCACAGAAACAAGCCAAGATGGAGATGCTAG...CAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACTCTGTCCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGGACAGAGTAGAAGACACTCATTTCCAAATACGTCTCCCTTGGGAATTCTAGCATCTCCATCTTaGCTTGTTTCTGTGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QEGQSRRHSFPNTSPLGILASPS*LVSVLP Trigger: GGGCAGCACAGAAACAAGCCAAGATGGAGATGCTAG...AATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACTCTGTCCTTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR GCA 90 bp | AGGAAGGACAGAGTAGAAGACACTCATTTCCAAATACGTCTCCCTTGGGAATTGCTTGGCTTGTTTCTGTaGTGCCCACATCTTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKDRVEDTHFQIRLPWELLGLFL*CPHLCL Trigger: AAGGCAAAGATGTGGGCAGCACAGAAACAAGCCAAG...CAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACTCTGTCCTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CCA 90 bp | CCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTAGAATTCTTAACAAAAGTCTaGATAGTTCGAAGGTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: PTVMGSTSSPWSRKDRVEFLTKV*IVRRSD Trigger: GTCGGACCTTCGAACTATCCAGACTTTTGTTAAGAA...TTCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018716.10 |
||
| CDS-3UTR CAA 90 bp | GGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCCTGAGCAGGGTTCTCCAGATTaGGGGAGACCCCCTAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: GPQVGTASSLQGKAGDPEQGSPD*GRPPNR Trigger: GCGGTTAGGGGGTCTCCCCAAATCTGGAGAACCCTG...CTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS GCA 90 bp | AGTTCGAAGGTCCGACGGGGCCGAGTCCCAGCCATCACTGTCTGCTaGACTCTCACCTCGCAATGGAGAGCTAGAGCCAGAGGCTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSKVRRGRVPAITVC*TLTSQWRARARGWP Trigger: TGGCCAGCCTCTGGCTCTAGCTCTCCATTGCGAGGTGAGAGTGCAGCAGACAGTGATGGCTGGGACTCGGCCCCGTCGGACCTTCGAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000138186.2 |
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| CDS CCA 90 bp | CCTCCTGGTCCCAACTTTCTATTCTTTCGGTCCTTCTTTCGAGGCTaGGAGAGGTCCCCCTGGGACAGCGGCACTGGGGCGAGAGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PPGPNFLFFRSFFRG*ERSPWDSGTGARAA Trigger: CGCTGCTCTCGCCCCAGTGCCGCTGTCCCAGGGGGACCTCTCCCAGCCTCGAAAGAAGGACCGAAAGAATAGAAAGTTGGGACCAGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000138186.2 ENSMUST00000153684.8 |
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| CDS GCA 90 bp | GATAGTTCGAAGGTCCGACGGGGCCGAGTCCCAGCCATCACTGTCTaGTGCACTCTCACCTCGCAATGGAGAGCTAGAGCCAGAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DSSKVRRGRVPAITV*CTLTSQWRARARGW Trigger: CCAGCCTCTGGCTCTAGCTCTCCATTGCGAGGTGAGAGTGCAGCAGACAGTGATGGCTGGGACTCGGCCCCGTCGGACCTTCGAACTATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000138186.2 |
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| CDS-3UTR CAA 90 bp | AATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCAGGGTTCTCCAGATTaGGGGAGACCCCCTAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: NCGPQVGTASSLQGKAGDQGSPD*GRPPNR Trigger: GCGGTTAGGGGGTCTCCCCAAATCTGGAGAACCCTG...GTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | ATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCGTGCTGCCCACATCTTaGCCTTCACTGTCAGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: IVALKWGQPPHSKGRLGTVLPTS*PSLSVG Trigger: CCCTACTGACAGTGAAGGCAAAGATGTGGGCAGCAC...GGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | GGGAATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGTGCTGCCCACATCTTaGCCTTCACTGTCAGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GNCGPQVGTASSLQGKAGVLPTS*PSLSVG Trigger: CCCTACTGACAGTGAAGGCAAAGATGTGGGCAGCAC...CCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | TTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCCCATCTCCATCTTGGCTaGTTTCTGTGCTGCCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LWPSSGDSLLTPREGWGPHLHLG*FLCCPH Trigger: ATGTGGGCAGCACAGAAACAAGCCAAGATGGAGATG...GGGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | GGGAATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGAGTGGAGATGCCACTTaGGGCCCATCCAGATCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GNCGPQVGTASSLQGKAGSGDAT*GPSRSK Trigger: TTTTGATCTGGATGGGCCCAAAGTGGCATCTCCACT...CCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | GAATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGAAGTGGAGATGCCACTTaGGGCCCATCCAGATCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ELWPSSGDSLLTPREGWGSGDAT*GPSRSK Trigger: TTTTGATCTGGATGGGCCCAAAGTGGCATCTCCACT...TCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | AATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCGCTTCTTGCTCTTCTaGATTCGAGACCGCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NCGPQVGTASSLQGKAGDRFLLF*IRDRFS Trigger: GGAAAAGCGGTCTCGAATCAAGAAGAGCAAGAAGCG...GTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | GAATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACATCTCCATCTTGGCTaGTTTCTGTGCTGCCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: ELWPSSGDSLLTPREGWGHLHLG*FLCCPH Trigger: ATGTGGGCAGCACAGAAACAAGCCAAGATGGAGATG...TCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | CCTTCCTCACTCCACAGGCTTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATCAGGGTTCTCCAGATTaGGGGAGACCCCCTAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: PSSLHRLWYSTSEQPRSNQGSPD*GRPPNR Trigger: GCGGTTAGGGGGTCTCCCCAAATCTGGAGAACCCTG...ATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAAGCCTGTGGAGTGAGGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS GCA 90 bp | AGGAGCCCTAGGAGGGCCAGGAGGTGGGAGTCTATCTCCCCGATCTaGCTTTTTCAACTTCCGCTTCTTGCTCTTCTTGATTCGAGACCG | + |
|
Preference number: 5 (lower is better) Translates to: RSPRRARRWESISPI*LFQLPLLALLDSRP Trigger: CGGTCTCGAATCAAGAAGAGCAAGAAGCGGAAGTTGAAAAAGGCAGATCGGGGAGATAGACTCCCACCTCCTGGCCCTCCTAGGGCTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | ATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCTTCAACTTCCGCTTCTaGCTCTTCTTGATTCGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: IVALKWGQPPHSKGRLGTFNFRF*LFLIRD Trigger: GTCTCGAATCAAGAAGAGCAAGAAGCGGAAGTTGAA...GGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | ACAGGCTTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATGGGGGAGCCCCAAGCTAGCATCTCCATCTaGGCTTGTTTCTGTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TGFGTPPLSNLAQMGEPQASISI*ACFCAA Trigger: GGCAGCACAGAAACAAGCCAAGATGGAGATGCTAGC...TTGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAAGCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS GCA 90 bp | TCCTTGAGCTTCATCTTCTCAAGCAGAGTAGCACTGTCAGGAGCCTaGAGACGAGAAAAAGTGGACCTTGGGGGTCCTGGCTGGGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLSFIFSSRVALSGA*RREKVDLGGPGWVG Trigger: TCCTACCCAGCCAGGACCCCCAAGGTCCACTTTTTCTCGTCTGCAGGCTCCTGACAGTGCTACTCTGCTTGAGAAGATGAAGCTCAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000138186.2 |
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| CDS CCA 90 bp | TTCAGAGTCTGTATCACTGGGAGGAGCCCTAGGAGGGCCAGGAGGTaGGAGTCTATCTCCCCGATCTGCCTTTTTCAACTTCCGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FRVCITGRSPRRARR*ESISPICLFQLPLL Trigger: AAGAAGCGGAAGTTGAAAAAGGCAGATCGGGGAGATAGACTCCCACCTCCTGGCCCTCCTAGGGCTCCTCCCAGTGATACAGACTCTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | ATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCTCAAAAAGAGAGTCCTaGAGCTTCATCTTCTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: IVALKWGQPPHSKGRLGTSKRES*SFIFSS Trigger: GCTTGAGAAGATGAAGCTCAAGGACTCTCTTTTTGA...GGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 |
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| CDS-3UTR CAA 90 bp | CCTCACTCCAAGGGAAGGCTGGGGACCCTGAGGCTCAGTTCCCAAGTAATGTCACGCTTCTTGCTCTTCTaGATTCGAGACCGCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PHSKGRLGTLRLSSQVMSRFLLF*IRDRFS Trigger: GGAAAAGCGGTCTCGAATCAAGAAGAGCAAGAAGCG...TGACATTACTTGGGAACTGAGCCTCAGGGTCCCCAGCCTTCCCTTGGAGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | GAATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGATTCAACTTCCGCTTCTaGCTCTTCTTGATTCGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ELWPSSGDSLLTPREGWGFNFRF*LFLIRD Trigger: GTCTCGAATCAAGAAGAGCAAGAAGCGGAAGTTGAA...TCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | ATTGTGGCCCTCAAGTGGGGACAGCCTCCTCACTCCAAGGGAAGGCTGGGGACCAAGAAGTCGGGAACGTaGGTCTTCTTAATCTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: IVALKWGQPPHSKGRLGTKKSGT*VFLILA Trigger: TGCTAAGATTAAGAAGACCAACGTTCCCGACTTCTT...GGTCCCCAGCCTTCCCTTGGAGTGAGGAGGCTGTCCCCACTTGAGGGCCACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | TTTGGTACTCCACCTCTGAGCAACCTCGCTCAAATGGGGGAGCCCCAAATTAAACAGGGTTCTCCAGATTaGGGGAGACCCCCTAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: FGTPPLSNLAQMGEPQIKQGSPD*GRPPNR Trigger: GCGGTTAGGGGGTCTCCCCAAATCTGGAGAACCCTG...TTTAATTTGGGGCTCCCCCATTTGAGCGAGGTTGCTCAGAGGTGGAGTACCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | GAGCCCACTCTGCTTTATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCTTCAACTTCCGCTTCTaGCTCTTCTTGATTCGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: EPTLLYLQHAGRLSEQPAFNFRF*LFLIRD Trigger: GTCTCGAATCAAGAAGAGCAAGAAGCGGAAGTTGAA...GGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAGTGGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CAA 90 bp | TATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCAACAGTATTAAAAACCAGGGTTCTCCAGATTaGGGGAGACCCCCTAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: YLQHAGRLSEQPANSIKNQGSPD*GRPPNR Trigger: GCGGTTAGGGGGTCTCCCCAAATCTGGAGAACCCTG...GTTTTTAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS CCA 90 bp | TCCATGACCCGCATCTCGCCTTCACTGGAGCTAGCATCTCCATCTTaGCTTGTTTCTGTGCTGCCCACATCTTTGCCTTCACTGTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SMTRISPSLELASPS*LVSVLPTSLPSLSV Trigger: TACTGACAGTGAAGGCAAAGATGTGGGCAGCACAGAAACAAGCCAAGATGGAGATGCTAGCTCCAGTGAAGGCGAGATGCGGGTCATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCCACTCTGCTTTATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCTCAAAAAGAGAGTCCTaGAGCTTCATCTTCTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: EPTLLYLQHAGRLSEQPASKRES*SFIFSS Trigger: GCTTGAGAAGATGAAGCTCAAGGACTCTCTTTTTGA...GGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAGTGGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 |
||
| CDS-3UTR CAA 90 bp | AAGGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGACGCTTCTTGCTCTTCTaGATTCGAGACCGCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KGTGLTGQRFCLQIQPPRRFLLF*IRDRFS Trigger: GGAAAAGCGGTCTCGAATCAAGAAGAGCAAGAAGCG...TCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
||
| CDS-3UTR CAA 90 bp | CGACCCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTGCTAGCATCTCCATCTaGGCTTGTTTCTGTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RPNCNGVNFKSMEQEGQSASISI*ACFCAA Trigger: GGCAGCACAGAAACAAGCCAAGATGGAGATGCTAGC...ACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | GAGCCCACTCTGCTTTATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCAAGAAGTCGGGAACGTaGGTCTTCTTAATCTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EPTLLYLQHAGRLSEQPAKKSGT*VFLILA Trigger: TGCTAAGATTAAGAAGACCAACGTTCCCGACTTCTT...GGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAGTGGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS TCA 90 bp | AATTTGTTAAAATCCTCAATGGTTCTCCGCCTTTTCTCCGGTGGCTaGGTCTCTGGTTTAAGAGTCGGAGGCGGATCTTCGGGACTGGGC | + |
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Preference number: 5 (lower is better) Translates to: NLLKSSMVLRLFSGG*VSGLRVGGGSSGLG Trigger: GCCCAGTCCCGAAGATCCGCCTCCGACTCTTAAACCAGAGACTCAGCCACCGGAGAAAAGGCGGAGAACCATTGAGGATTTTAACAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 |
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| CDS-3UTR CAA 90 bp | CCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTAGAAGTGCTGCCCACATCTTaGCCTTCACTGTCAGTAGGG | + |
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Preference number: 5 (lower is better) Translates to: PTVMGSTSSPWSRKDRVEVLPTS*PSLSVG Trigger: CCCTACTGACAGTGAAGGCAAAGATGTGGGCAGCAC...TTCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | GACACTCATTTCCAAATACGTCTCCCTTGGGAATTGTGGCCCTCAAGTGGGGACCATCTCCATCTTGGCTaGTTTCTGTGCTGCCCACAT | + |
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Preference number: 5 (lower is better) Translates to: DTHFQIRLPWELWPSSGDHLHLG*FLCCPH Trigger: ATGTGGGCAGCACAGAAACAAGCCAAGATGGAGATG...GTCCCCACTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | GGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGACCAAGAAGTCGGGAACGTaGGTCTTCTTAATCTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GYRVDWTEILSTDPASPTKKSGT*VFLILA Trigger: TGCTAAGATTAAGAAGACCAACGTTCCCGACTTCTT...GGTCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | CCCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTAGACGCTTCTTGCTCTTCTaGATTCGAGACCGCTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: PNCNGVNFKSMEQEGQSRRFLLF*IRDRFS Trigger: GGAAAAGCGGTCTCGAATCAAGAAGAGCAAGAAGCG...TCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | AAGGGTACAGGGTTGACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGATTCAACTTCCGCTTCTaGCTCTTCTTGATTCGAGAC | + |
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Preference number: 5 (lower is better) Translates to: KGTGLTGQRFCLQIQPPRFNFRF*LFLIRD Trigger: GTCTCGAATCAAGAAGAGCAAGAAGCGGAAGTTGAA...TCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGTCAACCCTGTACCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | AGTAGAAGACACTCATTTCCAAATACGTCTCCCTTGGGAATTGTGGCCCTCAAGGTGCTGCCCACATCTTaGCCTTCACTGTCAGTAGGG | + |
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Preference number: 5 (lower is better) Translates to: SRRHSFPNTSPLGIVALKVLPTS*PSLSVG Trigger: CCCTACTGACAGTGAAGGCAAAGATGTGGGCAGCAC...CTTGAGGGCCACAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | CCCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTAGACATCTCCATCTTGGCTaGTTTCTGTGCTGCCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: PNCNGVNFKSMEQEGQSRHLHLG*FLCCPH Trigger: ATGTGGGCAGCACAGAAACAAGCCAAGATGGAGATG...TCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | GTAAAACACAAGAGCCCACTCTGCTTTATTTACAACACGCAGGCCGTCTGTCTGGCTAGCATCTCCATCTaGGCTTGTTTCTGTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VKHKSPLCFIYNTQAVCLASISI*ACFCAA Trigger: GGCAGCACAGAAACAAGCCAAGATGGAGATGCTAGC...CAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAGTGGGCTCTTGTGTTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | TATTTACAACACGCAGGCCGTCTGTCTGAGCAGCCGGCCAACAGTATTAAAAACGCTAGCATCTCCATCTaGGCTTGTTTCTGTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: YLQHAGRLSEQPANSIKNASISI*ACFCAA Trigger: GGCAGCACAGAAACAAGCCAAGATGGAGATGCTAGC...GTTTTTAATACTGTTGGCCGGCTGCTCAGACAGACGGCCTGCGTGTTGTAAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | GTAAAACACAAGAGCCCACTCTGCTTTATTTACAACACGCAGGCCGTCTGTCTGAGTGGAGATGCCACTTaGGGCCCATCCAGATCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VKHKSPLCFIYNTQAVCLSGDAT*GPSRSK Trigger: TTTTGATCTGGATGGGCCCAAAGTGGCATCTCCACT...CAGACAGACGGCCTGCGTGTTGTAAATAAAGCAGAGTGGGCTCTTGTGTTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | CCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTAGAACGCTTCTTGCTCTTCTaGATTCGAGACCGCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTVMGSTSSPWSRKDRVERFLLF*IRDRFS Trigger: GGAAAAGCGGTCTCGAATCAAGAAGAGCAAGAAGCG...TTCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | CCAACTGTAATGGGGTCAACTTCAAGTCCATGGAGCAGGAAGGACAGAGTAGAACATCTCCATCTTGGCTaGTTTCTGTGCTGCCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: PTVMGSTSSPWSRKDRVEHLHLG*FLCCPH Trigger: ATGTGGGCAGCACAGAAACAAGCCAAGATGGAGATG...TTCTACTCTGTCCTTCCTGCTCCATGGACTTGAAGTTGACCCCATTACAGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | ACTGGACAGAGATTCTGTCTACAGATCCAGCCTCCCCGACCCAACTGTAATGGGAAGAAGTCGGGAACGTaGGTCTTCTTAATCTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TGQRFCLQIQPPRPNCNGKKSGT*VFLILA Trigger: TGCTAAGATTAAGAAGACCAACGTTCCCGACTTCTT...CCCATTACAGTTGGGTCGGGGAGGCTGGATCTGTAGACAGAATCTCTGTCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | AGGAAGGACAGAGTAGAAGACACTCATTTCCAAATACGTCTCCCTTGGGAATTGGCTAGCATCTCCATCTaGGCTTGTTTCTGTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RKDRVEDTHFQIRLPWELASISI*ACFCAA Trigger: GGCAGCACAGAAACAAGCCAAGATGGAGATGCTAGC...CAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACTCTGTCCTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS-3UTR CAA 90 bp | AGGAAGGACAGAGTAGAAGACACTCATTTCCAAATACGTCTCCCTTGGGAATTGAAGAAGTCGGGAACGTaGGTCTTCTTAATCTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RKDRVEDTHFQIRLPWELKKSGT*VFLILA Trigger: TGCTAAGATTAAGAAGACCAACGTTCCCGACTTCTT...CAATTCCCAAGGGAGACGTATTTGGAAATGAGTGTCTTCTACTCTGTCCTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS GCA 72 bp | GTCCGACGGGGCCGAGTCCCAGCCATCACTGTCTGCTaGACTCTCACCTCGCAATGGAGAGCTAGAGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: VRRGRVPAITVC*TLTSQWRARAR Trigger: TCTGGCTCTAGCTCTCCATTGCGAGGTGAGAGTGCAGCAGACAGTGATGGCTGGGACTCGGCCCCGTCGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000138186.2 |
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| CDS GCA 72 bp | AAGGTCCGACGGGGCCGAGTCCCAGCCATCACTGTCTaGTGCACTCTCACCTCGCAATGGAGAGCTAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: KVRRGRVPAITV*CTLTSQWRARA Trigger: GGCTCTAGCTCTCCATTGCGAGGTGAGAGTGCAGCAGACAGTGATGGCTGGGACTCGGCCCCGTCGGACCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000138186.2 |
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| CDS CCA 72 bp | CCCAACTTTCTATTCTTTCGGTCCTTCTTTCGAGGCTaGGAGAGGTCCCCCTGGGACAGCGGCACTGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PNFLFFRSFFRG*ERSPWDSGTGA Trigger: CGCCCCAGTGCCGCTGTCCCAGGGGGACCTCTCCCAGCCTCGAAAGAAGGACCGAAAGAATAGAAAGTTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000138186.2 ENSMUST00000153684.8 |
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| CDS CCA 72 bp | GGTGGATCCACGTCCCACAGAGGCTGCACTCAATCATaGGCCGCCCCGCAAAGGGCTTTCTGCAGTAACACG | + |
|
Preference number: 6 (lower is better) Translates to: GGSTSHRGCTQS*AAPQRAFCSNT Trigger: CGTGTTACTGCAGAAAGCCCTTTGCGGGGCGGCCCATGATTGAGTGCAGCCTCTGTGGGACGTGGATCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS TCA 72 bp | TGGGCCGCCCCGCAAAGGGCTTTCTGCAGTAACACGTaGTCAGATCCCAGGAGTCGTCACCTGATTCTACCA | + |
|
Preference number: 6 (lower is better) Translates to: WAAPQRAFCSNT*SDPRSRHLILP Trigger: TGGTAGAATCAGGTGACGACTCCTGGGATCTGATCACGTGTTACTGCAGAAAGCCCTTTGCGGGGCGGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS GCA 72 bp | GACCCCCTAACCGCCGGGCCTCTGGCCGAAGTTCCTTaGATTTCTGGCAATAAAAGAAGTCGGGAACGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: DPLTAGPLAEVP*ISGNKRSRERW Trigger: CCAACGTTCCCGACTTCTTTTATTGCCAGAAATGCAAGGAACTTCGGCCAGAGGCCCGGCGGTTAGGGGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS CCA 72 bp | AATGGTTCTCCGCCTTTTCTCCGGTGGCTGAGTCTCTaGTTTAAGAGTCGGAGGCGGATCTTCGGGACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: NGSPPFLRWLSL*FKSRRRIFGTG Trigger: CCCAGTCCCGAAGATCCGCCTCCGACTCTTAAACCAGAGACTCAGCCACCGGAGAAAAGGCGGAGAACCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 |
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| CDS CCA 72 bp | TGTATCACTGGGAGGAGCCCTAGGAGGGCCAGGAGGTaGGAGTCTATCTCCCCGATCTGCCTTTTTCAACTT | + |
|
Preference number: 6 (lower is better) Translates to: CITGRSPRRARR*ESISPICLFQL Trigger: AAGTTGAAAAAGGCAGATCGGGGAGATAGACTCCCACCTCCTGGCCCTCCTAGGGCTCCTCCCAGTGATACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS GCA 72 bp | TTCATCTTCTCAAGCAGAGTAGCACTGTCAGGAGCCTaGAGACGAGAAAAAGTGGACCTTGGGGGTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FIFSSRVALSGA*RREKVDLGGPG Trigger: GCCAGGACCCCCAAGGTCCACTTTTTCTCGTCTGCAGGCTCCTGACAGTGCTACTCTGCTTGAGAAGATGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000138186.2 |
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| CDS CAA 72 bp | CCGCATCTCGCCTTCACTGGAGCTAGCATCTCCATCTaGGCTTGTTTCTGTGCTGCCCACATCTTTGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PHLAFTGASISI*ACFCAAHIFAF Trigger: GAAGGCAAAGATGTGGGCAGCACAGAAACAAGCCAAGATGGAGATGCTAGCTCCAGTGAAGGCGAGATGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS TCA 72 bp | AAATCCTCAATGGTTCTCCGCCTTTTCTCCGGTGGCTaGGTCTCTGGTTTAAGAGTCGGAGGCGGATCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: KSSMVLRLFSGG*VSGLRVGGGSS Trigger: CGAAGATCCGCCTCCGACTCTTAAACCAGAGACTCAGCCACCGGAGAAAAGGCGGAGAACCATTGAGGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 |
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| CDS CCA 72 bp | CGCATCTCGCCTTCACTGGAGCTAGCATCTCCATCTTaGCTTGTTTCTGTGCTGCCCACATCTTTGCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RISPSLELASPS*LVSVLPTSLPS Trigger: TGAAGGCAAAGATGTGGGCAGCACAGAAACAAGCCAAGATGGAGATGCTAGCTCCAGTGAAGGCGAGATGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS CAA 72 bp | TCTCCATCTTGGCTTGTTTCTGTGCTGCCCACATCTTaGCCTTCACTGTCAGTAGGGGGAGCACCTTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SPSWLVSVLPTS*PSLSVGGAPSE Trigger: CTCTGAAGGTGCTCCCCCTACTGACAGTGAAGGCAAAGATGTGGGCAGCACAGAAACAAGCCAAGATGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS CAA 90 bp | GAGCTAGCATCTCCATCTTGGCTTGTTTCTGTGCTGCCCACATCTTaGCCTTCACTGTCAGTAGGGGGAGCACCTTCAGAGTGCACTGTA | + |
|
Preference number: 6 (lower is better) Translates to: ELASPSWLVSVLPTS*PSLSVGGAPSECTV Trigger: TACAGTGCACTCTGAAGGTGCTCCCCCTACTGACAGTGAAGGCAAAGATGTGGGCAGCACAGAAACAAGCCAAGATGGAGATGCTAGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS CAA 90 bp | ATCCATGACCCGCATCTCGCCTTCACTGGAGCTAGCATCTCCATCTaGGCTTGTTTCTGTGCTGCCCACATCTTTGCCTTCACTGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: IHDPHLAFTGASISI*ACFCAAHIFAFTVS Trigger: ACTGACAGTGAAGGCAAAGATGTGGGCAGCACAGAAACAAGCCAAGATGGAGATGCTAGCTCCAGTGAAGGCGAGATGCGGGTCATGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000153684.8 |
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| CDS CAA 90 bp | AGTGGAGATGCCACTTTGGGCCCATCCAGATCAAAAAGAGAGTCCTaGAGCTTCATCTTCTCAAGCAGAGTAGCACTGTCAGGAGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SGDATLGPSRSKRES*SFIFSSRVALSGAC Trigger: GCAGGCTCCTGACAGTGCTACTCTGCTTGAGAAGATGAAGCTCAAGGACTCTCTTTTTGATCTGGATGGGCCCAAAGTGGCATCTCCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000138186.2 |
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| CDS TCA 72 bp | GTGGACCTTGGGGGTCCTGGCTGGGTAGGACCTGATTaGACTGCCCTTCTCTTTGATGACTTTGCTTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: VDLGGPGWVGPD*TALLFDDFAFL Trigger: TAAGAAAGCAAAGTCATCAAAGAGAAGGGCAGTTCAATCAGGTCCTACCCAGCCAGGACCCCCAAGGTCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018716.10 ENSMUST00000138186.2 |
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| CDS CAA 72 bp | TGCGTCAATGATGTGGGAGAGAGTGGAGATGCCACTTaGGGCCCATCCAGATCAAAAAGAGAGTCCTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CVNDVGESGDAT*GPSRSKRESLS Trigger: GCTCAAGGACTCTCTTTTTGATCTGGATGGGCCCAAAGTGGCATCTCCACTCTCTCCCACATCATTGACGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000133485.8 ENSMUST00000135814.2 ENSMUST00000138186.2 ENSMUST00000153684.8 |
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| CDS CAA 90 bp | CGGGAAGTATGCGTCAATGATGTGGGAGAGAGTGGAGATGCCACTTaGGGCCCATCCAGATCAAAAAGAGAGTCCTTGAGCTTCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: REVCVNDVGESGDAT*GPSRSKRESLSFIF Trigger: GAAGATGAAGCTCAAGGACTCTCTTTTTGATCTGGATGGGCCCAAAGTGGCATCTCCACTCTCTCCCACATCATTGACGCATACTTCCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000138186.2 |
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| CDS CAA 90 bp | AGTGGAGATGCCACTTTGGGCCCATCCAGATCAAAAAGAGAGTCCTaGAGCTTCATCTTCTCAAGCAGAGTAGCACTGTCAGGAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SGDATLGPSRSKRES*SFIFSSRVALSGAS Trigger: AGAGGCTCCTGACAGTGCTACTCTGCTTGAGAAGATGAAGCTCAAGGACTCTCTTTTTGATCTGGATGGGCCCAAAGTGGCATCTCCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101526.9 |
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| CDS CAA 72 bp | GCCACTTTGGGCCCATCCAGATCAAAAAGAGAGTCCTaGAGCTTCATCTTCTCAAGCAGAGTAGCACTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ATLGPSRSKRES*SFIFSSRVALS Trigger: TGACAGTGCTACTCTGCTTGAGAAGATGAAGCTCAAGGACTCTCTTTTTGATCTGGATGGGCCCAAAGTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018716.10 ENSMUST00000101526.9 ENSMUST00000138186.2 |
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