RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHF21A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058318

Ensembl transcript IDs: ENSMUST00000044036.15, ENSMUST00000068702.14, ENSMUST00000090586.12, ENSMUST00000111290.10, ENSMUST00000111291.9, ENSMUST00000111292.8, ENSMUST00000111293.9, ENSMUST00000111294.8, ENSMUST00000111297.10, ENSMUST00000159366.8, ENSMUST00000159727.2, ENSMUST00000159961.8, ENSMUST00000161067.2

Found 990 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGGGCCCAGACAAGTCCAACAGGGGGTTGGCAGGTTGGGGGAGCTaGGACAGGATATCAGCCTGCAGCTGGTCTCTGATCCTCTGCCAA +
Preference number: 1 (lower is better)
Translates to: MGPDKSNRGLAGWGS*DRISACSWSLILCQ
Trigger: TTGGCAGAGGATCAGAGACCAGCTGCAGGCTGATATCCTGTCTCAGCTCCCCCAACCTGCCAACCCCCTGTTGGACTTGTCTGGGCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 90 bp GGCCAGACTACCTGCCCTCTTCTCAAACGCTGGGAAGTGAATGGGTaGCTGGTGTGGATGGGCCTGGCTCACTCTCACAAGCACCTCTTG +
Preference number: 1 (lower is better)
Translates to: GQTTCPLLKRWEVNG*LVWMGLAHSHKHLL
Trigger: CAAGAGGTGCTTGTGAGAGTGAGCCAGGCCCATCCACACCAGCCACCCATTCACTTCCCAGCGTTTGAGAAGAGGGCAGGTAGTCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 90 bp GTGTGGCCAGACTACCTGCCCTCTTCTCAAACGCTGGGAAGTGAATaGGTGGCTGGTGTGGATGGGCCTGGCTCACTCTCACAAGCACCT +
Preference number: 1 (lower is better)
Translates to: VWPDYLPSSQTLGSE*VAGVDGPGSLSQAP
Trigger: AGGTGCTTGTGAGAGTGAGCCAGGCCCATCCACACCAGCCACCCATTCACTTCCCAGCGTTTGAGAAGAGGGCAGGTAGTCTGGCCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 90 bp CACATGTGGCTACAAGAGCAACACACGCAGGTAGGGGAGGGAGGATaGGAGCTTGGAAGCGGCTCTGAAGGGGCAGTGTGTGTGTATGTC +
Preference number: 1 (lower is better)
Translates to: HMWLQEQHTQVGEGG*ELGSGSEGAVCVYV
Trigger: GACATACACACACACTGCCCCTTCAGAGCCGCTTCCAAGCTCCCATCCTCCCTCCCCTACCTGCGTGTGTTGCTCTTGTAGCCACATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 90 bp GAAGCCATGGGGTCTGGAGAACCCAGTGTCCAGAGAAGGACCAACTaGTCCGTCCTACTCCTGCCCCTGGGAGGAATGTCCTCAAGAGTT +
Preference number: 1 (lower is better)
Translates to: EAMGSGEPSVQRRTN*SVLLLPLGGMSSRV
Trigger: AACTCTTGAGGACATTCCTCCCAGGGGCAGGAGTAGGACGGACCAGTTGGTCCTTCTCTGGACACTGGGTTCTCCAGACCCCATGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR TCA 90 bp CAGGTTGGGGGAGCTGAGACAGGATATCAGCCTGCAGCTGGTCTCTaGTCCTCTGCCAAAGATCCAACTAGTCCAGGCATCTCCAACGCC +
Preference number: 1 (lower is better)
Translates to: QVGGAETGYQPAAGL*SSAKDPTSPGISNA
Trigger: GGCGTTGGAGATGCCTGGACTAGTTGGATCTTTGGCAGAGGATCAGAGACCAGCTGCAGGCTGATATCCTGTCTCAGCTCCCCCAACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 90 bp AAGCATTTCCTCCCTGATGCAGCCAGCCTGCATCCTATACCCTCCTaGAGGCCAAGTATACAGGCAGTGAGGAGCCTCACTGGTCAGTCC +
Preference number: 1 (lower is better)
Translates to: KHFLPDAASLHPIPS*RPSIQAVRSLTGQS
Trigger: GGACTGACCAGTGAGGCTCCTCACTGCCTGTATACTTGGCCTCCAGGAGGGTATAGGATGCAGGCTGGCTGCATCAGGGAGGAAATGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 90 bp ACCTGCCCTCTTCTCAAACGCTGGGAAGTGAATGGGTGGCTGGTGTaGATGGGCCTGGCTCACTCTCACAAGCACCTCTTGTCTGCTGTA +
Preference number: 1 (lower is better)
Translates to: TCPLLKRWEVNGWLV*MGLAHSHKHLLSAV
Trigger: TACAGCAGACAAGAGGTGCTTGTGAGAGTGAGCCAGGCCCATCCACACCAGCCACCCATTCACTTCCCAGCGTTTGAGAAGAGGGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR TCA 90 bp AAGGCAAGCATAGTGATTCTAGCCCAGGAACACCCAGGAAGCATGTaGGTGAGTGGAATGGGAGTGAACTCTGACCTTGGGGCGGGCAGG +
Preference number: 1 (lower is better)
Translates to: KASIVILAQEHPGSM*VSGMGVNSDLGAGR
Trigger: CCTGCCCGCCCCAAGGTCAGAGTTCACTCCCATTCCACTCACTCACATGCTTCCTGGGTGTTCCTGGGCTAGAATCACTATGCTTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 90 bp CCAAAGGAGGGCCTAAAGGGAAGAGACCATTTAAAGGTTGTGAGCTaGAGGGAGGGGGCTGGTAGGGAGAGTCAAGAAGTCAAGCCCCAA +
Preference number: 1 (lower is better)
Translates to: PKEGLKGRDHLKVVS*REGAGRESQEVKPQ
Trigger: TTGGGGCTTGACTTCTTGACTCTCCCTACCAGCCCCCTCCCTCCAGCTCACAACCTTTAAATGGTCTCTTCCCTTTAGGCCCTCCTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR TCA 90 bp GATGACACAGGACGCACACAGACTCACCGACCTCACTTGACACTATaGCGCCTACTCTATCATGCAAGGTCTCCGCTACCCTCAACAGGA +
Preference number: 1 (lower is better)
Translates to: DDTGRTQTHRPHLTL*RLLYHARSPLPSTG
Trigger: TCCTGTTGAGGGTAGCGGAGACCTTGCATGATAGAGTAGGCGTCATAGTGTCAAGTGAGGTCGGTGAGTCTGTGTGCGTCCTGTGTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR TCA 90 bp ACCTGGGCTCTTAGAGACATACGGACTCTCAAAGCATTTCCTCCCTaGTGCAGCCAGCCTGCATCCTATACCCTCCTGGAGGCCAAGTAT +
Preference number: 1 (lower is better)
Translates to: TWALRDIRTLKAFPP*CSQPASYTLLEAKY
Trigger: ATACTTGGCCTCCAGGAGGGTATAGGATGCAGGCTGGCTGCATCAGGGAGGAAATGCTTTGAGAGTCCGTATGTCTCTAAGAGCCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 90 bp CAATCATTTACACAGAGCAAAGTAGCCTGCATTCAACAGAAGCCATaGGGTCTGGAGAACCCAGTGTCCAGAGAAGGACCAACTGGTCCG +
Preference number: 1 (lower is better)
Translates to: QSFTQSKVACIQQKP*GLENPVSREGPTGP
Trigger: CGGACCAGTTGGTCCTTCTCTGGACACTGGGTTCTCCAGACCCCATGGCTTCTGTTGAATGCAGGCTACTTTGCTCTGTGTAAATGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR TCA 90 bp GACCCCCTAGAGCTTCAGATTTCTCTCTTTAACGCAAGATGGACTTaGAGGCTACCTGGGCTCTTAGAGACATACGGACTCTCAAAGCAT +
Preference number: 1 (lower is better)
Translates to: DPLELQISLFNARWT*RLPGLLETYGLSKH
Trigger: ATGCTTTGAGAGTCCGTATGTCTCTAAGAGCCCAGGTAGCCTTCAAGTCCATCTTGCGTTAAAGAGAGAAATCTGAAGCTCTAGGGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 90 bp AAACTCCAAATACAAATTCTACCAAGACTGAAATCACAAAGGGCATaGACACAGACAGGACTGGGTCTGGCTGGCTGTATGCGTGGTGGA +
Preference number: 1 (lower is better)
Translates to: KLQIQILPRLKSQRA*TQTGLGLAGCMRGG
Trigger: TCCACCACGCATACAGCCAGCCAGACCCAGTCCTGTCTGTGTCCATGCCCTTTGTGATTTCAGTCTTGGTAGAATTTGTATTTGGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 90 bp CATGGTCCAGTCTTTGCATGTACACACAGAATAACAAGAATCAATTaGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCT +
Preference number: 1 (lower is better)
Translates to: HGPVFACTHRITRIN*QTRVPPGTSIFSLS
Trigger: AGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGTGTACATGCAAAGACTGGACCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR CCA 90 bp AAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTaGTGTATAATAGAGAGAGTAATATATTATGTCACTTGGCATGGT +
Preference number: 1 (lower is better)
Translates to: KNEPTVAVEAAAGTH*CIIERVIYYVTWHG
Trigger: ACCATGCCAAGTGACATAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR CCA 90 bp TACACACAGAATAACAAGAATCAATTGGCAAACTCGGGTGCCACCTaGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGA +
Preference number: 1 (lower is better)
Translates to: YTQNNKNQLANSGAT*HKHLLSLWNQRTKR
Trigger: TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR CCA 90 bp GGCACACACTGGTGTATAATAGAGAGAGTAATATATTATGTCACTTaGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGT +
Preference number: 1 (lower is better)
Translates to: GTHWCIIERVIYYVT*HGAGKEPPAGTISC
Trigger: ACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCTATTATACACCAGTGTGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR GCA 90 bp AAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTaGATGTACACACAGAATAACAAGAATCAATTGGCAAACTCGGGT +
Preference number: 1 (lower is better)
Translates to: KNLQLALFHVTWSSL*MYTQNNKNQLANSG
Trigger: ACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR CCA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATaGTCCAGTCTTTGCATGTACACACAGAATAACAAGAATCAATTG +
Preference number: 1 (lower is better)
Translates to: MVLAKNLQLALFHVT*SSLCMYTQNNKNQL
Trigger: CAATTGATTCTTGTTATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp CGCCTTTCTCCCTCCGGACCCCTCGCACCCTCCCTTCCCTGCTTAACAAGGCCTGGCTGCTGGAGGCTGTaGGCGGGGCGAGCTAGGGAG +
Preference number: 2 (lower is better)
Translates to: RLSPSGPLAPSLPCLTRPGCWRL*AGRARE
Trigger: CTCCCTAGCTCGCCCCGCCCACAGCCTCCAGCAGCC...AGGCCTTGTTAAGCAGGGAAGGGAGGGTGCGAGGGGTCCGGAGGGAGAAAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp CGCCTTTCTCCCTCCGGACCCCTCGCACCCTCCCTTCCCTGCTTAACAAGGCCTGGCTGTGGAGGCTGCTaGAGGCACACACTGGTGTAT +
Preference number: 2 (lower is better)
Translates to: RLSPSGPLAPSLPCLTRPGCGGC*RHTLVY
Trigger: ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCC...AGGCCTTGTTAAGCAGGGAAGGGAGGGTGCGAGGGGTCCGGAGGGAGAAAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp CAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCACAGGTCTAAAGGGACAGGCTGCTGGAGGCTGTaGGCGGGGCGAGCTAGGGAG +
Preference number: 2 (lower is better)
Translates to: QCVCMSQVVPGTHRSKGTGCWRL*AGRARE
Trigger: CTCCCTAGCTCGCCCCGCCCACAGCCTCCAGCAGCC...TGTCCCTTTAGACCTGTGCGTACCTGGGACCACCTGGGACATACACACACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR TCA 90 bp CGCCTTTCTCCCTCCGGACCCCTCGCACCCTCCCTTCCCTGCTTAACAAGGCCTCTCCCAGTAAGGATCTaGAACCTGCTCTCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: RLSPSGPLAPSLPCLTRPLPVRI*NLLSSL
Trigger: GAGGGAGGAGAGCAGGTTTCAGATCCTTACTGGGAG...AGGCCTTGTTAAGCAGGGAAGGGAGGGTGCGAGGGGTCCGGAGGGAGAAAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR TCA 90 bp TGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTGGTCTGCTCAGCCCACCCACCAATGGGAGTGAACTCTaGCCTTGGGGCGGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: WLYAWWSLLTSGLLSPPTNGSEL*PWGGQA
Trigger: TGCCTGCCCGCCCCAAGGTCAGAGTTCACTCCCATT...GGTGGGTGGGCTGAGCAGACCAGAAGTCAGCAAGCTCCACCACGCATACAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp CGCCTTTCTCCCTCCGGACCCCTCGCACCCTCCCTTCCCTGCTTAACAAGGCCTCACTTGGCATGGTGCTaGCAAAGAACCTCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: RLSPSGPLAPSLPCLTRPHLAWC*QRTSSW
Trigger: CCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTG...AGGCCTTGTTAAGCAGGGAAGGGAGGGTGCGAGGGGTCCGGAGGGAGAAAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGGCCACACAAGGCAAGCATAGTGATTCTAGCCCAGGAACACCCAGGAAGCATGGGCTGCTGGAGGCTGTaGGCGGGGCGAGCTAGGGAG +
Preference number: 2 (lower is better)
Translates to: RPHKASIVILAQEHPGSMGCWRL*AGRARE
Trigger: CTCCCTAGCTCGCCCCGCCCACAGCCTCCAGCAGCC...CATGCTTCCTGGGTGTTCCTGGGCTAGAATCACTATGCTTGCCTTGTGTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp AAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCCTCCCTCCGCCCGTCCGTGGCTGTGGAGGCTaGTGCAGGCACACACTGGTG +
Preference number: 2 (lower is better)
Translates to: KQTAPSKDLKPALLPPPVRGCGG*CRHTLV
Trigger: CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACG...GACGGGCGGAGGGAGGAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp CACCTGACTGCAACTCACCCTGGGCTAAGAGCAAGAACACTGGAGAGGGGTGCAGCTCGGGTCTCGTGCTaGCACCAGCAGCTCTTCTGG +
Preference number: 2 (lower is better)
Translates to: HLTATHPGLRARTLERGAARVSC*HQQLFW
Trigger: CCAGAAGAGCTGCTGGTGGCAGCACGAGACCCGAGC...TGCACCCCTCTCCAGTGTTCTTGCTCTTAGCCCAGGGTGAGTTGCAGTCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp CACCTGACTGCAACTCACCCTGGGCTAAGAGCAAGAACACTGGAGAGGGGTGCAAGTGAGGAGCCTCACTaGTCAGTCCCCCAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: HLTATHPGLRARTLERGASEEPH*SVPQGA
Trigger: GGCCCCTTGGGGGACTGACCAGTGAGGCTCCTCACT...TGCACCCCTCTCCAGTGTTCTTGCTCTTAGCCCAGGGTGAGTTGCAGTCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGCGGCTCTGAAGGGGCAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCAAATGGGTGGCTGGTGTaGATGGGCCTGGCTCACTCT +
Preference number: 2 (lower is better)
Translates to: SGSEGAVCVYVPGGPRYANGWLV*MGLAHS
Trigger: AGAGTGAGCCAGGCCCATCCACACCAGCCACCCATT...TGCGTACCTGGGACCACCTGGGACATACACACACACTGCCCCTTCAGAGCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGTGTCCAGAGAAGGACCAACTGGTCCGTCCTACTCCTGCCCCTGGGAGGAATGTGCCAGTCACTAAGATaGGGGCCAGCTGGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: SVQRRTNWSVLLLPLGGMCQSLR*GPAGGC
Trigger: GCAGCCTCCAGCTGGCCCCCATCTTAGTGACTGGCA...CATTCCTCCCAGGGGCAGGAGTAGGACGGACCAGTTGGTCCTTCTCTGGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR TCA 90 bp ACAGACAGGACTGGGTCTGGCTGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTAATGGGAGTGAACTCTaGCCTTGGGGCGGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: TDRTGSGWLYAWWSLLTSNGSEL*PWGGQA
Trigger: TGCCTGCCCGCCCCAAGGTCAGAGTTCACTCCCATT...AGAAGTCAGCAAGCTCCACCACGCATACAGCCAGCCAGACCCAGTCCTGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR TCA 90 bp CGGCAGAGAGGCAGCTGTAGGTGTAGACAGACAGCTGGAGACACAGTCGCTTGGTCCCCTCAGTCAACCTaGAGCCAGAGGCCTGAAGCT +
Preference number: 2 (lower is better)
Translates to: RQRGSCRCRQTAGDTVAWSPQST*SQRPEA
Trigger: AGCTTCAGGCCTCTGGCTTCAGGTTGACTGAGGGGA...CCAAGCGACTGTGTCTCCAGCTGTCTGTCTACACCTACAGCTGCCTCTCTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp TGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTGGTCTGCTCAGCCCACCCACCCACTTGGCATGGTGCTaGCAAAGAACCTCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: WLYAWWSLLTSGLLSPPTHLAWC*QRTSSW
Trigger: CCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTG...GGTGGGTGGGCTGAGCAGACCAGAAGTCAGCAAGCTCCACCACGCATACAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGGAAGGCGATGGTGCTGACCTCTATGGCCTACACCTGCCAGCCTGACCCTGGGGGCCCTGCAGGAAACTaGCACACCAGTCTAGAGATA +
Preference number: 2 (lower is better)
Translates to: RKAMVLTSMAYTCQPDPGGPAGN*HTSLEI
Trigger: TATCTCTAGACTGGTGTGCCAGTTTCCTGCAGGGCC...CCCAGGGTCAGGCTGGCAGGTGTAGGCCATAGAGGTCAGCACCATCGCCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp CGGCAGAGAGGCAGCTGTAGGTGTAGACAGACAGCTGGAGACACAGTCGCTTGGAATGGGTGGCTGGTGTaGATGGGCCTGGCTCACTCT +
Preference number: 2 (lower is better)
Translates to: RQRGSCRCRQTAGDTVAWNGWLV*MGLAHS
Trigger: AGAGTGAGCCAGGCCCATCCACACCAGCCACCCATT...CCAAGCGACTGTGTCTCCAGCTGTCTGTCTACACCTACAGCTGCCTCTCTGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGTGTCCAGAGAAGGACCAACTGGTCCGTCCTACTCCTGCCCCTGGGAGGAATGTGGGAAGTGAATGGGTaGCTGGTGTGGATGGGCCTG +
Preference number: 2 (lower is better)
Translates to: SVQRRTNWSVLLLPLGGMWEVNG*LVWMGL
Trigger: CAGGCCCATCCACACCAGCCACCCATTCACTTCCCA...CATTCCTCCCAGGGGCAGGAGTAGGACGGACCAGTTGGTCCTTCTCTGGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp GGATGGGAGCTTGGAAGCGGCTCTGAAGGGGCAGTGTGTGTGTATGTCCCAGGTAAGCTGAGGCCTGTGTaGCCAGACTACCTGCCCTCT +
Preference number: 2 (lower is better)
Translates to: GWELGSGSEGAVCVYVPGKLRPV*PDYLPS
Trigger: AGAGGGCAGGTAGTCTGGCCACACAGGCCTCAGCTT...ACCTGGGACATACACACACACTGCCCCTTCAGAGCCGCTTCCAAGCTCCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR TCA 90 bp ACAAGTCCAACAGGGGGTTGGCAGGTTGGGGGAGCTGAGACAGGATATCAGCCTAGGAGACAGCAAGTCTaGGTAGGGAGGAGCGAGGAG +
Preference number: 2 (lower is better)
Translates to: TSPTGGWQVGGAETGYQPRRQQV*VGRSEE
Trigger: CTCCTCGCTCCTCCCTACTCAGACTTGCTGTCTCCT...AGGCTGATATCCTGTCTCAGCTCCCCCAACCTGCCAACCCCCTGTTGGACTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR TCA 90 bp CGGCAGAGAGGCAGCTGTAGGTGTAGACAGACAGCTGGAGACACAGTCGCTTGGCCTGCAGCTGGTCTCTaGTCCTCTGCCAAAGATCCA +
Preference number: 2 (lower is better)
Translates to: RQRGSCRCRQTAGDTVAWPAAGL*SSAKDP
Trigger: TGGATCTTTGGCAGAGGATCAGAGACCAGCTGCAGG...CCAAGCGACTGTGTCTCCAGCTGTCTGTCTACACCTACAGCTGCCTCTCTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp GCTGGGTACACATGTACCTTACCACTGCCTGATGGGCATGAGACAAGAAGCAGCCCCTCCGCCCGTCCCTaGTCCCCACCCAACAAAACA +
Preference number: 2 (lower is better)
Translates to: AGYTCTLPLPDGHETRSSPSARP*SPPNKT
Trigger: TGTTTTGTTGGGTGGGGAGCAGGGACGGGCGGAGGG...GCTGCTTCTTGTCTCATGCCCATCAGGCAGTGGTAAGGTACATGTGTACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp AGTGTCCAGAGAAGGACCAACTGGTCCGTCCTACTCCTGCCCCTGGGAGGAATGTGTGGCCAGACTACCTaGCCTCTTCTCAAACGCTGG +
Preference number: 2 (lower is better)
Translates to: SVQRRTNWSVLLLPLGGMCGQTT*PLLKRW
Trigger: CCAGCGTTTGAGAAGAGGGCAGGTAGTCTGGCCACA...CATTCCTCCCAGGGGCAGGAGTAGGACGGACCAGTTGGTCCTTCTCTGGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGGGAGGAGCGAGGAGGGGGCGGACCCGGCCCTGCAGGAAACTGGCACACCAGTCATCTTCTCTCTCTCTaGAACCAAAGAACCAAAAGA +
Preference number: 2 (lower is better)
Translates to: REERGGGGPGPAGNWHTSHLLSL*NQRTKR
Trigger: TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATG...ACTGGTGTGCCAGTTTCCTGCAGGGCCGGGTCCGCCCCCTCCTCGCTCCTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp TGGCTCAGAAAGAGAGAGGACCCTTTAGGGGAGGAAGGCGATGGTGCTGACCTCAAGGGAAGGGCTAGGTaGGCACCAGCCTGCGTTCTA +
Preference number: 2 (lower is better)
Translates to: WLRKREDPLGEEGDGADLKGRAR*APACVL
Trigger: TAGAACGCAGGCTGGTGCCCACCTAGCCCTTCCCTT...GAGGTCAGCACCATCGCCTTCCTCCCCTAAAGGGTCCTCTCTCTTTCTGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp GCTGGGTACACATGTACCTTACCACTGCCTGATGGGCATGAGACAAGAAGCAGCAGTGAGGAGCCTCACTaGTCAGTCCCCCAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: AGYTCTLPLPDGHETRSSSEEPH*SVPQGA
Trigger: GGCCCCTTGGGGGACTGACCAGTGAGGCTCCTCACT...GCTGCTTCTTGTCTCATGCCCATCAGGCAGTGGTAAGGTACATGTGTACCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp TGGCTCAGAAAGAGAGAGGACCCTTTAGGGGAGGAAGGCGATGGTGCTGACCTCAATGGGTGGCTGGTGTaGATGGGCCTGGCTCACTCT +
Preference number: 2 (lower is better)
Translates to: WLRKREDPLGEEGDGADLNGWLV*MGLAHS
Trigger: AGAGTGAGCCAGGCCCATCCACACCAGCCACCCATT...GAGGTCAGCACCATCGCCTTCCTCCCCTAAAGGGTCCTCTCTCTTTCTGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGCGGCTCTGAAGGGGCAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCACCTCTTCTCAAACGCTaGGAAGTGAATGGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: SGSEGAVCVYVPGGPRYAPLLKR*EVNGWL
Trigger: CAGCCACCCATTCACTTCCCAGCGTTTGAGAAGAGG...TGCGTACCTGGGACCACCTGGGACATACACACACACTGCCCCTTCAGAGCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp AGTGTCCAGAGAAGGACCAACTGGTCCGTCCTACTCCTGCCCCTGGGAGGAATGATTGGCAAACTCGGGTaGCACCTGGCACAAGCATCT +
Preference number: 2 (lower is better)
Translates to: SVQRRTNWSVLLLPLGGMIGKLG*HLAQAS
Trigger: AGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAAT...CATTCCTCCCAGGGGCAGGAGTAGGACGGACCAGTTGGTCCTTCTCTGGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp CGGCAGAGAGGCAGCTGTAGGTGTAGACAGACAGCTGGAGACACAGTCGCTTGGATTGGCAAACTCGGGTaGCACCTGGCACAAGCATCT +
Preference number: 2 (lower is better)
Translates to: RQRGSCRCRQTAGDTVAWIGKLG*HLAQAS
Trigger: AGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAAT...CCAAGCGACTGTGTCTCCAGCTGTCTGTCTACACCTACAGCTGCCTCTCTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp CAAGGTCTGAGACCGTGGGAACGCCCTGACACTATGCACATTCCATTTTGGCTTCGTGGCTGTGGAGGCTaGTGCAGGCACACACTGGTG +
Preference number: 2 (lower is better)
Translates to: QGLRPWERPDTMHIPFWLRGCGG*CRHTLV
Trigger: CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACG...AAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCACGGTCTCAGACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp AACAAACCAGAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGACGTGGCTGTGGAGGCTaGTGCAGGCACACACTGGTG +
Preference number: 2 (lower is better)
Translates to: NKPEQCLTDDTGRTQTHRRGCGG*CRHTLV
Trigger: CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACG...TCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTCTGGTTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp ACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGCACTTGGCATGGTGCTaGCAAAGAACCTCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: THRGCGGCCRHTLVYNREHLAWC*QRTSSW
Trigger: CCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTG...CTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGGGAGGAGCGAGGAGGGGGCGGACCCGGCCCTGCAGGAAACTGGCACACCAGTATATATTATGTCACTTaGCATGGTGCTGGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: REERGGGGPGPAGNWHTSIYYVT*HGAGKE
Trigger: TTCTTTGCCAGCACCATGCCAAGTGACATAATATAT...ACTGGTGTGCCAGTTTCCTGCAGGGCCGGGTCCGCCCCCTCCTCGCTCCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp GAAGAAGAGAAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGAACCCACCGTGGCTGTaGAGGCTGCTGCAGGCACAC +
Preference number: 2 (lower is better)
Translates to: EEEKRVVSIHTHLGRAALNPPWL*RLLQAH
Trigger: GTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTT...CAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTTCTCTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCTTAGAACCAACCCACCGTGGCTGTaGAGGCTGCTGCAGGCACAC +
Preference number: 2 (lower is better)
Translates to: KRVVSIHTHLGRAALLRTNPPWL*RLLQAH
Trigger: GTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTT...GGTTCTAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGTGTCCAGAGAAGGACCAACTGGTCCGTCCTACTCCTGCCCCTGGGAGGAATGCCATTCACACACACCTaGGTCGTGCTGCTCTGCTTA +
Preference number: 2 (lower is better)
Translates to: SVQRRTNWSVLLLPLGGMPFTHT*VVLLCL
Trigger: TAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGG...CATTCCTCCCAGGGGCAGGAGTAGGACGGACCAGTTGGTCCTTCTCTGGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp GGATGGGAGCTTGGAAGCGGCTCTGAAGGGGCAGTGTGTGTGTATGTCCCAGGTGGCCCTGCAGGAAACTaGCACACCAGTCTAGAGATA +
Preference number: 2 (lower is better)
Translates to: GWELGSGSEGAVCVYVPGGPAGN*HTSLEI
Trigger: TATCTCTAGACTGGTGTGCCAGTTTCCTGCAGGGCC...ACCTGGGACATACACACACACTGCCCCTTCAGAGCCGCTTCCAAGCTCCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp GCTGGGTACACATGTACCTTACCACTGCCTGATGGGCATGAGACAAGAAGCAGCGGTGGCTGGTGTGGATaGGCCTGGCTCACTCTCACA +
Preference number: 2 (lower is better)
Translates to: AGYTCTLPLPDGHETRSSGGWCG*AWLTLT
Trigger: TGTGAGAGTGAGCCAGGCCCATCCACACCAGCCACC...GCTGCTTCTTGTCTCATGCCCATCAGGCAGTGGTAAGGTACATGTGTACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGTGTCCAGAGAAGGACCAACTGGTCCGTCCTACTCCTGCCCCTGGGAGGAATGCCTCTTCTCAAACGCTaGGAAGTGAATGGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: SVQRRTNWSVLLLPLGGMPLLKR*EVNGWL
Trigger: CAGCCACCCATTCACTTCCCAGCGTTTGAGAAGAGG...CATTCCTCCCAGGGGCAGGAGTAGGACGGACCAGTTGGTCCTTCTCTGGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp GCTGGGTACACATGTACCTTACCACTGCCTGATGGGCATGAGACAAGAAGCAGCTGCCAGTCACTAAGATaGGGGCCAGCTGGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: AGYTCTLPLPDGHETRSSCQSLR*GPAGGC
Trigger: GCAGCCTCCAGCTGGCCCCCATCTTAGTGACTGGCA...GCTGCTTCTTGTCTCATGCCCATCAGGCAGTGGTAAGGTACATGTGTACCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATACACTTGGCATGGTGCTaGCAAAGAACCTCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: NEPTVAVEAAAGTHWCIIHLAWC*QRTSSW
Trigger: CCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTG...TATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGGAAGGCGATGGTGCTGACCTCTATGGCCTACACCTGCCAGCCTGACCCTGGGGCTGCAGGCACACACTaGTGTATAATAGAGAGAGTA +
Preference number: 2 (lower is better)
Translates to: RKAMVLTSMAYTCQPDPGAAGTH*CIIERV
Trigger: TACTCTCTCTATTATACACCAGTGTGTGCCTGCAGC...CCCAGGGTCAGGCTGGCAGGTGTAGGCCATAGAGGTCAGCACCATCGCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp CACCTGACTGCAACTCACCCTGGGCTAAGAGCAAGAACACTGGAGAGGGGTGCACCATTCACACACACCTaGGTCGTGCTGCTCTGCTTA +
Preference number: 2 (lower is better)
Translates to: HLTATHPGLRARTLERGAPFTHT*VVLLCL
Trigger: TAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGG...TGCACCCCTCTCCAGTGTTCTTGCTCTTAGCCCAGGGTGAGTTGCAGTCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CAA 90 bp GGGTGGCTGGTGTGGATGGGCCTGGCTCACTCTCACAAGCACCTCTaGTCTGCTGTAGTTTCAGTCAGGATCCAGCTCATTTTCCATGGA +
Preference number: 2 (lower is better)
Translates to: GWLVWMGLAHSHKHL*SAVVSVRIQLIFHG
Trigger: TCCATGGAAAATGAGCTGGATCCTGACTGAAACTACAGCAGACAAGAGGTGCTTGTGAGAGTGAGCCAGGCCCATCCACACCAGCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR TCA 90 bp GCTGGGTACACATGTACCTTACCACTGCCTGATGGGCATGAGACAAGAAGCAGCCACCCAGGAAGCATGTaGGTGAGTGGAATGGGAGTG +
Preference number: 2 (lower is better)
Translates to: AGYTCTLPLPDGHETRSSHPGSM*VSGMGV
Trigger: CACTCCCATTCCACTCACTCACATGCTTCCTGGGTG...GCTGCTTCTTGTCTCATGCCCATCAGGCAGTGGTAAGGTACATGTGTACCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR TCA 90 bp CACCTGACTGCAACTCACCCTGGGCTAAGAGCAAGAACACTGGAGAGGGGTGCAATCGGGGACTGCTTCTaGGACTTTCTTGAAGGACGT +
Preference number: 2 (lower is better)
Translates to: HLTATHPGLRARTLERGAIGDCF*DFLEGR
Trigger: ACGTCCTTCAAGAAAGTCTCAGAAGCAGTCCCCGAT...TGCACCCCTCTCCAGTGTTCTTGCTCTTAGCCCAGGGTGAGTTGCAGTCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp GAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGACCTCACTTGTGTCACTTGGCATGGTaGTGGCAAAGAACCTCCAGC +
Preference number: 2 (lower is better)
Translates to: EQCLTDDTGRTQTHRPHLCHLAW*WQRTSS
Trigger: GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACA...CAAGTGAGGTCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp AAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATTGTCACTTGGCATGGTaGTGGCAAAGAACCTCCAGC +
Preference number: 2 (lower is better)
Translates to: KRTHRGCGGCCRHTLVYNCHLAW*WQRTSS
Trigger: GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACA...ATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp AACAAACCAGAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGAGGCTGTGGAGGCTGCTaGAGGCACACACTGGTGTAT +
Preference number: 2 (lower is better)
Translates to: NKPEQCLTDDTGRTQTHRGCGGC*RHTLVY
Trigger: ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCC...TCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTCTGGTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCCGTGGCTGTGGAGGCTaGTGCAGGCACACACTGGTG +
Preference number: 2 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPRGCGG*CRHTLV
Trigger: CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACG...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp GGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCCCCTCCGCCCGTCCCTaGTCCCCACCCAACAAAACA +
Preference number: 2 (lower is better)
Translates to: GPSRNVKYCLCHILSHPCPSARP*SPPNKT
Trigger: TGTTTTGTTGGGTGGGGAGCAGGGACGGGCGGAGGG...GCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp CGGCAGAGAGGCAGCTGTAGGTGTAGACAGACAGCTGGAGACACAGTCGCTTGGTTATGTCACTTGGCATaGTGCTGGCAAAGAACCTCC +
Preference number: 2 (lower is better)
Translates to: RQRGSCRCRQTAGDTVAWLCHLA*CWQRTS
Trigger: GGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAA...CCAAGCGACTGTGTCTCCAGCTGTCTGTCTACACCTACAGCTGCCTCTCTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp TGGGAACGCCCTGACACTATGCACATTCCATTTTGGCTTCAAACAGGAGATGAGAACCCACCGTGGCTGTaGAGGCTGCTGCAGGCACAC +
Preference number: 2 (lower is better)
Translates to: WERPDTMHIPFWLQTGDENPPWL*RLLQAH
Trigger: GTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTT...CTCATCTCCTGTTTGAAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp ACAGACAGGACTGGGTCTGGCTGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTATATCAGCCTGCAGCTaGTCTCTGATCCTCTGCCAA +
Preference number: 2 (lower is better)
Translates to: TDRTGSGWLYAWWSLLTSISACS*SLILCQ
Trigger: TTGGCAGAGGATCAGAGACCAGCTGCAGGCTGATAT...AGAAGTCAGCAAGCTCCACCACGCATACAGCCAGCCAGACCCAGTCCTGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR TCA 90 bp GCTGGGTACACATGTACCTTACCACTGCCTGATGGGCATGAGACAAGAAGCAGCCTCACCGACCTCACTTaGCACTATGACGCCTACTCT +
Preference number: 2 (lower is better)
Translates to: AGYTCTLPLPDGHETRSSLTDLT*HYDAYS
Trigger: AGAGTAGGCGTCATAGTGTCAAGTGAGGTCGGTGAG...GCTGCTTCTTGTCTCATGCCCATCAGGCAGTGGTAAGGTACATGTGTACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR TCA 90 bp GCTGGGTACACATGTACCTTACCACTGCCTGATGGGCATGAGACAAGAAGCAGCAACCAGAACAGTGCCTaGCTGATGACACAGGACGCA +
Preference number: 2 (lower is better)
Translates to: AGYTCTLPLPDGHETRSSNQNSA*LMTQDA
Trigger: TGCGTCCTGTGTCATCAGTCAGGCACTGTTCTGGTT...GCTGCTTCTTGTCTCATGCCCATCAGGCAGTGGTAAGGTACATGTGTACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR TCA 90 bp ACAGACAGGACTGGGTCTGGCTGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTGTATTGTCGGGGAGATaGGTAGAGAGCCTTTCAGAA +
Preference number: 2 (lower is better)
Translates to: TDRTGSGWLYAWWSLLTSVLSGR*VESLSE
Trigger: TTCTGAAAGGCTCTCTACTCATCTCCCCGACAATAC...AGAAGTCAGCAAGCTCCACCACGCATACAGCCAGCCAGACCCAGTCCTGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR TCA 90 bp ACAAGTCCAACAGGGGGTTGGCAGGTTGGGGGAGCTGAGACAGGATATCAGCCTGTATTGTCGGGGAGATaGGTAGAGAGCCTTTCAGAA +
Preference number: 2 (lower is better)
Translates to: TSPTGGWQVGGAETGYQPVLSGR*VESLSE
Trigger: TTCTGAAAGGCTCTCTACTCATCTCCCCGACAATAC...AGGCTGATATCCTGTCTCAGCTCCCCCAACCTGCCAACCCCCTGTTGGACTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp GAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGACCTCACTTGGAAGAAATCCGGCTTTaGTCTTCTAGCGTCTCCTCG +
Preference number: 2 (lower is better)
Translates to: EQCLTDDTGRTQTHRPHLEEIRL*SSSVSS
Trigger: CGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTC...CAAGTGAGGTCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCGTGGCTGTGGAGGCTaGTGCAGGCACACACTGGTG +
Preference number: 2 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPARGCGG*CRHTLV
Trigger: CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACG...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp CGCCTTTCTCCCTCCGGACCCCTCGCACCCTCCCTTCCCTGCTTAACAAGGCCTCTATTTCATGTAACATaGTCCAGTCTTTGCATGTAC +
Preference number: 2 (lower is better)
Translates to: RLSPSGPLAPSLPCLTRPLFHVT*SSLCMY
Trigger: GTACATGCAAAGACTGGACCATGTTACATGAAATAG...AGGCCTTGTTAAGCAGGGAAGGGAGGGTGCGAGGGGTCCGGAGGGAGAAAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTAACCCACCGTGGCTGTaGAGGCTGCTGCAGGCACAC +
Preference number: 2 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPANPPWL*RLLQAH
Trigger: GTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTT...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp CAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCACAGGTCTAAAGGGACACATCCTATACCCTCCTaGAGGCCAAGTATACAGGCA +
Preference number: 2 (lower is better)
Translates to: QCVCMSQVVPGTHRSKGTHPIPS*RPSIQA
Trigger: TGCCTGTATACTTGGCCTCCAGGAGGGTATAGGATG...TGTCCCTTTAGACCTGTGCGTACCTGGGACCACCTGGGACATACACACACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp AATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCGAAGAAATCCGGCTTTaGTCTTCTAGCGTCTCCTCG +
Preference number: 2 (lower is better)
Translates to: NWQTRVPPGTSIFSLSGTEEIRL*SSSVSS
Trigger: CGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTC...GGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp AGCGGCTCTGAAGGGGCAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCAACATGGTCCAGTCTTTaGATGTACACACAGAATAAC +
Preference number: 2 (lower is better)
Translates to: SGSEGAVCVYVPGGPRYATWSSL*MYTQNN
Trigger: GTTATTCTGTGTGTACATGCAAAGACTGGACCATGT...TGCGTACCTGGGACCACCTGGGACATACACACACACTGCCCCTTCAGAGCCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp AACAAACCAGAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGATGTCACTTGGCATGGTaGTGGCAAAGAACCTCCAGC +
Preference number: 2 (lower is better)
Translates to: NKPEQCLTDDTGRTQTHRCHLAW*WQRTSS
Trigger: GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACA...TCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTCTGGTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp AAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCTTAGAACCTGTCACTTGGCATGGTaGTGGCAAAGAACCTCCAGC +
Preference number: 2 (lower is better)
Translates to: KRVVSIHTHLGRAALLRTCHLAW*WQRTSS
Trigger: GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACA...GGTTCTAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp CAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCACAGGTCTAAAGGGACATGGGTCGTGCTGCTCTaGTTAGAACCTTCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: QCVCMSQVVPGTHRSKGTWVVLL*LEPSLL
Trigger: AAGAAGAGAAGGTTCTAAGCAGAGCAGCACGACCCA...TGTCCCTTTAGACCTGTGCGTACCTGGGACCACCTGGGACATACACACACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp AGACAAGTCCAACAGGGGGTTGGCAGGTTGGGGGAGCTGAGACAGGATATCAGCAACAAACCAGAACAGTaGCTGACTGATGACACAGGA +
Preference number: 2 (lower is better)
Translates to: RQVQQGVGRLGELRQDISNKPEQ*LTDDTG
Trigger: TCCTGTGTCATCAGTCAGGCACTGTTCTGGTTTGTT...GCTGATATCCTGTCTCAGCTCCCCCAACCTGCCAACCCCCTGTTGGACTTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp CACCTGACTGCAACTCACCCTGGGCTAAGAGCAAGAACACTGGAGAGGGGTGCAAACAAACCAGAACAGTaGCTGACTGATGACACAGGA +
Preference number: 2 (lower is better)
Translates to: HLTATHPGLRARTLERGANKPEQ*LTDDTG
Trigger: TCCTGTGTCATCAGTCAGGCACTGTTCTGGTTTGTT...TGCACCCCTCTCCAGTGTTCTTGCTCTTAGCCCAGGGTGAGTTGCAGTCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp GTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATACACTTGGCATGGTGCTaGCAAAGAACCTCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: VAVEAAAGTHWCIIERVIHLAWC*QRTSSW
Trigger: CCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTG...TATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAAAACGAACCCACCGTaGCTGTGGAGGCTGCTGCAG +
Preference number: 2 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPKTNPP*LWRLLQ
Trigger: CTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTT...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AACAAACCAGAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGACCATTCACACACACCTaGGTCGTGCTGCTCTGCTTA +
Preference number: 2 (lower is better)
Translates to: NKPEQCLTDDTGRTQTHRPFTHT*VVLLCL
Trigger: TAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGG...TCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTCTGGTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp GAAGAAGAGAAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGGAAGAAATCCGGCTTTaGTCTTCTAGCGTCTCCTCG +
Preference number: 2 (lower is better)
Translates to: EEEKRVVSIHTHLGRAALEEIRL*SSSVSS
Trigger: CGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTC...CAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTTCTCTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCGGCTGTGGAGGCTGCTaGAGGCACACACTGGTGTAT +
Preference number: 2 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALGCGGC*RHTLVY
Trigger: ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCC...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp CAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATATAACAAGAATCAATTaGCAAACTCGGGTGCCACCT +
Preference number: 2 (lower is better)
Translates to: QKRTHRGCGGCCRHTLVYITRIN*QTRVPP
Trigger: AGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTAT...ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGCGGCTCTGAAGGGGCAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCAATATATTATGTCACTTaGCATGGTGCTGGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: SGSEGAVCVYVPGGPRYAIYYVT*HGAGKE
Trigger: TTCTTTGCCAGCACCATGCCAAGTGACATAATATAT...TGCGTACCTGGGACCACCTGGGACATACACACACACTGCCCCTTCAGAGCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR TCA 90 bp ACAGACAGGACTGGGTCTGGCTGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTTTACTTCACTCCAGTTaGCTCAAAGCAACTCATTTC +
Preference number: 2 (lower is better)
Translates to: TDRTGSGWLYAWWSLLTSLLHSS*LKATHF
Trigger: GAAATGAGTTGCTTTGAGTCAACTGGAGTGAAGTAA...AGAAGTCAGCAAGCTCCACCACGCATACAGCCAGCCAGACCCAGTCCTGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp CAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATACATGGTCCAGTCTTTaGATGTACACACAGAATAAC +
Preference number: 2 (lower is better)
Translates to: QKRTHRGCGGCCRHTLVYTWSSL*MYTQNN
Trigger: GTTATTCTGTGTGTACATGCAAAGACTGGACCATGT...ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp ACAAGTCCAACAGGGGGTTGGCAGGTTGGGGGAGCTGAGACAGGATATCAGCCTCATCTTCTCTCTCTCTaGAACCAAAGAACCAAAAGA +
Preference number: 2 (lower is better)
Translates to: TSPTGGWQVGGAETGYQPHLLSL*NQRTKR
Trigger: TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATG...AGGCTGATATCCTGTCTCAGCTCCCCCAACCTGCCAACCCCCTGTTGGACTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGTGTCCAGAGAAGGACCAACTGGTCCGTCCTACTCCTGCCCCTGGGAGGAATGCTATTTCATGTAACATaGTCCAGTCTTTGCATGTAC +
Preference number: 2 (lower is better)
Translates to: SVQRRTNWSVLLLPLGGMLFHVT*SSLCMY
Trigger: GTACATGCAAAGACTGGACCATGTTACATGAAATAG...CATTCCTCCCAGGGGCAGGAGTAGGACGGACCAGTTGGTCCTTCTCTGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCTTAGAACCTTATGTCACTTGGCATaGTGCTGGCAAAGAACCTCC +
Preference number: 2 (lower is better)
Translates to: KRVVSIHTHLGRAALLRTLCHLA*CWQRTS
Trigger: GGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAA...GGTTCTAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGGCCACACAAGGCAAGCATAGTGATTCTAGCCCAGGAACACCCAGGAAGCATGGCTGCAGGCACACACTaGTGTATAATAGAGAGAGTA +
Preference number: 2 (lower is better)
Translates to: RPHKASIVILAQEHPGSMAAGTH*CIIERV
Trigger: TACTCTCTCTATTATACACCAGTGTGTGCCTGCAGC...CATGCTTCCTGGGTGTTCCTGGGCTAGAATCACTATGCTTGCCTTGTGTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCATTGGCAAACTCGGGTaGCACCTGGCACAAGCATCT +
Preference number: 2 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALIGKLG*HLAQAS
Trigger: AGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAAT...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTATTGGCAAACTCGGGTaGCACCTGGCACAAGCATCT +
Preference number: 2 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPAIGKLG*HLAQAS
Trigger: AGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAAT...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp TCGGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTTGTCACTTGGCATGGTaGTGGCAAAGAACCTCCAGC +
Preference number: 2 (lower is better)
Translates to: SAPPGTLNTAYVIYFPTLCHLAW*WQRTSS
Trigger: GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACA...AAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAAGGCTGTGGAGGCTGCTaGAGGCACACACTGGTGTAT +
Preference number: 2 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKGCGGC*RHTLVY
Trigger: ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCC...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp CAAGGTCTGAGACCGTGGGAACGCCCTGACACTATGCACATTCCATTTTGGCTTAACAAACCAGAACAGTaGCTGACTGATGACACAGGA +
Preference number: 2 (lower is better)
Translates to: QGLRPWERPDTMHIPFWLNKPEQ*LTDDTG
Trigger: TCCTGTGTCATCAGTCAGGCACTGTTCTGGTTTGTT...AAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCACGGTCTCAGACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp TTTACTTCACTCCAGTTGACTCAAAGCAACTCATTTCCAAACATCAGAAGATGGGCTCGGGTCTCGTGCTaGCACCAGCAGCTCTTCTGG +
Preference number: 2 (lower is better)
Translates to: FTSLQLTQSNSFPNIRRWARVSC*HQQLFW
Trigger: CCAGAAGAGCTGCTGGTGGCAGCACGAGACCCGAGC...CCATCTTCTGATGTTTGGAAATGAGTTGCTTTGAGTCAACTGGAGTGAAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp CCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGACTATTTCATGTAACATaGTCCAGTCTTTGCATGTAC +
Preference number: 2 (lower is better)
Translates to: PTVAVEAAAGTHWCIIERLFHVT*SSLCMY
Trigger: GTACATGCAAAGACTGGACCATGTTACATGAAATAG...TCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR TCA 90 bp TTTACTTCACTCCAGTTGACTCAAAGCAACTCATTTCCAAACATCAGAAGATGGGCAGGTTGGGGGAGCTaGGACAGGATATCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: FTSLQLTQSNSFPNIRRWAGWGS*DRISAC
Trigger: GCAGGCTGATATCCTGTCTCAGCTCCCCCAACCTGC...CCATCTTCTGATGTTTGGAAATGAGTTGCTTTGAGTCAACTGGAGTGAAGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGGAAGAAATCCGGCTTTaGTCTTCTAGCGTCTCCTCG +
Preference number: 2 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQEEIRL*SSSVSS
Trigger: CGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTC...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCATTGGCAAACTCGGGTaGCACCTGGCACAAGCATCT +
Preference number: 2 (lower is better)
Translates to: RESNILCHLAWCWQRTSSIGKLG*HLAQAS
Trigger: AGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAAT...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCTTAGAACCATAACAAGAATCAATTaGCAAACTCGGGTGCCACCT +
Preference number: 2 (lower is better)
Translates to: KRVVSIHTHLGRAALLRTITRIN*QTRVPP
Trigger: AGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTAT...GGTTCTAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp GGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCATAACAAGAATCAATTaGCAAACTCGGGTGCCACCT +
Preference number: 2 (lower is better)
Translates to: GMVLAKNLQLALFHVTWSITRIN*QTRVPP
Trigger: AGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTAT...GGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp TGGGAACGCCCTGACACTATGCACATTCCATTTTGGCTTCAAACAGGAGATGAGTTATGTCACTTGGCATaGTGCTGGCAAAGAACCTCC +
Preference number: 2 (lower is better)
Translates to: WERPDTMHIPFWLQTGDELCHLA*CWQRTS
Trigger: GGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAA...CTCATCTCCTGTTTGAAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCGAAGAAATCCGGCTTTaGTCTTCTAGCGTCTCCTCG +
Preference number: 2 (lower is better)
Translates to: RESNILCHLAWCWQRTSSEEIRL*SSSVSS
Trigger: CGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTC...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp CAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATATTGGCAAACTCGGGTaGCACCTGGCACAAGCATCT +
Preference number: 2 (lower is better)
Translates to: QLALFHVTWSSLCMYTQNIGKLG*HLAQAS
Trigger: AGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAAT...ATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp AAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCTTAGAACCACATGGTCCAGTCTTTaGATGTACACACAGAATAAC +
Preference number: 2 (lower is better)
Translates to: KRVVSIHTHLGRAALLRTTWSSL*MYTQNN
Trigger: GTTATTCTGTGTGTACATGCAAAGACTGGACCATGT...GGTTCTAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp TTTGGTTTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGGCTGTGGAGGCTGCTaGAGGCACACACTGGTGTAT +
Preference number: 2 (lower is better)
Translates to: FGFMVVKSLGTGKPTHSLGCGGC*RHTLVY
Trigger: ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCC...CAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCTTATGTCACTTGGCATaGTGCTGGCAAAGAACCTCC +
Preference number: 2 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALLCHLA*CWQRTS
Trigger: GGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAA...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGGCCACACAAGGCAAGCATAGTGATTCTAGCCCAGGAACACCCAGGAAGCATGATATATTATGTCACTTaGCATGGTGCTGGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: RPHKASIVILAQEHPGSMIYYVT*HGAGKE
Trigger: TTCTTTGCCAGCACCATGCCAAGTGACATAATATAT...CATGCTTCCTGGGTGTTCCTGGGCTAGAATCACTATGCTTGCCTTGTGTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp TTTGGTTTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGAAAACGAACCCACCGTaGCTGTGGAGGCTGCTGCAG +
Preference number: 2 (lower is better)
Translates to: FGFMVVKSLGTGKPTHSLKTNPP*LWRLLQ
Trigger: CTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTT...CAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp TTTACTTCACTCCAGTTGACTCAAAGCAACTCATTTCCAAACATCAGAAGATGGCCAAGCCCCAGCCTATaGGCCCAGACAAGTCCAACA +
Preference number: 2 (lower is better)
Translates to: FTSLQLTQSNSFPNIRRWPSPSL*AQTSPT
Trigger: TGTTGGACTTGTCTGGGCCCATAGGCTGGGGCTTGG...CCATCTTCTGATGTTTGGAAATGAGTTGCTTTGAGTCAACTGGAGTGAAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR TCA 90 bp TTTACTTCACTCCAGTTGACTCAAAGCAACTCATTTCCAAACATCAGAAGATGGCTCCCAGTAAGGATCTaGAACCTGCTCTCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: FTSLQLTQSNSFPNIRRWLPVRI*NLLSSL
Trigger: GAGGGAGGAGAGCAGGTTTCAGATCCTTACTGGGAG...CCATCTTCTGATGTTTGGAAATGAGTTGCTTTGAGTCAACTGGAGTGAAGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCGCTGCAGGCACACACTaGTGTATAATAGAGAGAGTA +
Preference number: 2 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALAAGTH*CIIERV
Trigger: TACTCTCTCTATTATACACCAGTGTGTGCCTGCAGC...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCCATCTTCTCTCTCTCTaGAACCAAAGAACCAAAAGA +
Preference number: 2 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPHLLSL*NQRTKR
Trigger: TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATG...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp GGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCCATCTTCTCTCTCTCTaGAACCAAAGAACCAAAAGA +
Preference number: 2 (lower is better)
Translates to: GPSRNVKYCLCHILSHPCHLLSL*NQRTKR
Trigger: TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATG...GCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCATAACAAGAATCAATTaGCAAACTCGGGTGCCACCT +
Preference number: 2 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALITRIN*QTRVPP
Trigger: AGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTAT...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR CAA 90 bp TGCTTAGAACCTTCTCTTCTTATAAATATAGAAAAGGGATGGAGCTaGTTTTCAAGTAAACCTCTGATCCGCCTTTCTCCCTCCGGACCC +
Preference number: 2 (lower is better)
Translates to: CLEPSLLINIEKGWS*FSSKPLIRLSPSGP
Trigger: GGGTCCGGAGGGAGAAAGGCGGATCAGAGGTTTACTTGAAAACAAGCTCCATCCCTTTTCTATATTTATAAGAAGAGAAGGTTCTAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCATAACAAGAATCAATTaGCAAACTCGGGTGCCACCT +
Preference number: 2 (lower is better)
Translates to: RESNILCHLAWCWQRTSSITRIN*QTRVPP
Trigger: AGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTAT...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp GGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCCTATTTCATGTAACATaGTCCAGTCTTTGCATGTAC +
Preference number: 2 (lower is better)
Translates to: GPSRNVKYCLCHILSHPCLFHVT*SSLCMY
Trigger: GTACATGCAAAGACTGGACCATGTTACATGAAATAG...GCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCATATATTATGTCACTTaGCATGGTGCTGGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPIYYVT*HGAGKE
Trigger: TTCTTTGCCAGCACCATGCCAAGTGACATAATATAT...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAAGCTGCAGGCACACACTaGTGTATAATAGAGAGAGTA +
Preference number: 2 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKAAGTH*CIIERV
Trigger: TACTCTCTCTATTATACACCAGTGTGTGCCTGCAGC...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp TTTACTTCACTCCAGTTGACTCAAAGCAACTCATTTCCAAACATCAGAAGATGGCATCCTATACCCTCCTaGAGGCCAAGTATACAGGCA +
Preference number: 2 (lower is better)
Translates to: FTSLQLTQSNSFPNIRRWHPIPS*RPSIQA
Trigger: TGCCTGTATACTTGGCCTCCAGGAGGGTATAGGATG...CCATCTTCTGATGTTTGGAAATGAGTTGCTTTGAGTCAACTGGAGTGAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCACATGGTCCAGTCTTTaGATGTACACACAGAATAAC +
Preference number: 2 (lower is better)
Translates to: RESNILCHLAWCWQRTSSTWSSL*MYTQNN
Trigger: GTTATTCTGTGTGTACATGCAAAGACTGGACCATGT...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp TTTACTTCACTCCAGTTGACTCAAAGCAACTCATTTCCAAACATCAGAAGATGGTGGGTCGTGCTGCTCTaGTTAGAACCTTCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: FTSLQLTQSNSFPNIRRWWVVLL*LEPSLL
Trigger: AAGAAGAGAAGGTTCTAAGCAGAGCAGCACGACCCA...CCATCTTCTGATGTTTGGAAATGAGTTGCTTTGAGTCAACTGGAGTGAAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAAATAACAAGAATCAATTaGCAAACTCGGGTGCCACCT +
Preference number: 2 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKITRIN*QTRVPP
Trigger: AGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTAT...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp TGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTAACATGGTCCAGTCTTTaGATGTACACACAGAATAAC +
Preference number: 2 (lower is better)
Translates to: CGGCCRHTLVYNRESNILTWSSL*MYTQNN
Trigger: GTTATTCTGTGTGTACATGCAAAGACTGGACCATGT...TAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp TTTGGTTTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGCTGCAGGCACACACTaGTGTATAATAGAGAGAGTA +
Preference number: 2 (lower is better)
Translates to: FGFMVVKSLGTGKPTHSLAAGTH*CIIERV
Trigger: TACTCTCTCTATTATACACCAGTGTGTGCCTGCAGC...CAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp TTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGCATCTTCTCTCTCTCTaGAACCAAAGAACCAAAAGA +
Preference number: 2 (lower is better)
Translates to: FMVVKSLGTGKPTHSLDLHLLSL*NQRTKR
Trigger: TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATG...CAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp TTTGGTTTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGATAACAAGAATCAATTaGCAAACTCGGGTGCCACCT +
Preference number: 2 (lower is better)
Translates to: FGFMVVKSLGTGKPTHSLITRIN*QTRVPP
Trigger: AGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTAT...CAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp TGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTATGTCACTTGATAACAAGAATCAATTaGCAAACTCGGGTGCCACCT +
Preference number: 2 (lower is better)
Translates to: CCRHTLVYNRESNILCHLITRIN*QTRVPP
Trigger: AGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTAT...CAAGTGACATAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACTATTTCATGTAACATaGTCCAGTCTTTGCATGTAC +
Preference number: 2 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKLFHVT*SSLCMY
Trigger: GTACATGCAAAGACTGGACCATGTTACATGAAATAG...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR GCA 90 bp TGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTATGTCACTTGACATGGTCCAGTCTTTaGATGTACACACAGAATAAC +
Preference number: 2 (lower is better)
Translates to: CCRHTLVYNRESNILCHLTWSSL*MYTQNN
Trigger: GTTATTCTGTGTGTACATGCAAAGACTGGACCATGT...CAAGTGACATAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp AAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAATATATTATGTCACTTaGCATGGTGCTGGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: KSLGTGKPTHSLDLSFYLIYYVT*HGAGKE
Trigger: TTCTTTGCCAGCACCATGCCAAGTGACATAATATAT...TAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CCA 90 bp TTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGATATATTATGTCACTTaGCATGGTGCTGGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: FMVVKSLGTGKPTHSLDLIYYVT*HGAGKE
Trigger: TTCTTTGCCAGCACCATGCCAAGTGACATAATATAT...CAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR TCA 72 bp GGAGATGAGATCCCTGTACCAAGGAGACAGCAAGTCTaGGTAGGGAGGAGCGAGGAGGGGGCGGACCCGGCC +
Preference number: 3 (lower is better)
Translates to: GDEIPVPRRQQV*VGRSEEGADPA
Trigger: GGCCGGGTCCGCCCCCTCCTCGCTCCTCCCTACTCAGACTTGCTGTCTCCTTGGTACAGGGATCTCATCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR TCA 72 bp GATGGTGCTGACCTCTATGGCCTACACCTGCCAGCCTaGCCCTGGGGACAAGGGGACTCCCAGTCCAAGGCC +
Preference number: 3 (lower is better)
Translates to: DGADLYGLHLPA*PWGQGDSQSKA
Trigger: GGCCTTGGACTGGGAGTCCCCTTGTCCCCAGGGTCAGGCTGGCAGGTGTAGGCCATAGAGGTCAGCACCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR TCA 72 bp GGTAGGGGAGGGAGGATGGGAGCTTGGAAGCGGCTCTaGAGGGGCAGTGTGTGTGTATGTCCCAGGTGGTCC +
Preference number: 3 (lower is better)
Translates to: GRGGRMGAWKRL*RGSVCVCPRWS
Trigger: GGACCACCTGGGACATACACACACACTGCCCCTTCAGAGCCGCTTCCAAGCTCCCATCCTCCCTCCCCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CAA 90 bp CGGCAGAGAGGCAGCTGTAGGTGTAGACAGACAGCTGGAGACACAGTCGCTTGGCTGCTACTCCTAGACTaGGGAGCCTGGCGGGCTCAG +
Preference number: 3 (lower is better)
Translates to: RQRGSCRCRQTAGDTVAWLLLLD*GAWRAQ
Trigger: CTGAGCCCGCCAGGCTCCCAAGTCTAGGAGTAGCAG...CCAAGCGACTGTGTCTCCAGCTGTCTGTCTACACCTACAGCTGCCTCTCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR TCA 72 bp ATCCTATACCCTCCTGGAGGCCAAGTATACAGGCAGTaGGGAGCCTCACTGGTCAGTCCCCCAAGGGGCCCC +
Preference number: 3 (lower is better)
Translates to: ILYPPGGQVYRQ*GASLVSPPRGP
Trigger: GGGGCCCCTTGGGGGACTGACCAGTGAGGCTCCTCACTGCCTGTATACTTGGCCTCCAGGAGGGTATAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR GCA 72 bp GGATGCCAGTCACTAAGATGGGGGCCAGCTGGAGGCTaGCTGTGGCTGTTACTGCCTATAGAGGCAGGCCCT +
Preference number: 3 (lower is better)
Translates to: GCQSLRWGPAGG*LWLLLPIEAGP
Trigger: AGGGCCTGCCTCTATAGGCAGTAACAGCCACAGGCAGCCTCCAGCTGGCCCCCATCTTAGTGACTGGCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR GCA 72 bp CAAGAAGCAGCAGCAGGAGAGGTGCCCCTAAGAGGATaGCAGTCACTAAGATGGGGGCCAGCTGGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: QEAAAGEVPLRG*QSLRWGPAGGC
Trigger: GCAGCCTCCAGCTGGCCCCCATCTTAGTGACTGGCATCCTCTTAGGGGCACCTCTCCTGCTGCTGCTTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 72 bp GGAGAGGTGCCCCTAAGAGGATGCCAGTCACTAAGATaGGGGCCAGCTGGAGGCTGCCTGTGGCTGTTACTG +
Preference number: 3 (lower is better)
Translates to: GEVPLRGCQSLR*GPAGGCLWLLL
Trigger: CAGTAACAGCCACAGGCAGCCTCCAGCTGGCCCCCATCTTAGTGACTGGCATCCTCTTAGGGGCACCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR TCA 72 bp GCCAGACTACCTGCCCTCTTCTCAAACGCTGGGAAGTaGATGGGTGGCTGGTGTGGATGGGCCTGGCTCACT +
Preference number: 3 (lower is better)
Translates to: ARLPALFSNAGK*MGGWCGWAWLT
Trigger: AGTGAGCCAGGCCCATCCACACCAGCCACCCATTCACTTCCCAGCGTTTGAGAAGAGGGCAGGTAGTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 72 bp CTGTGTGGCCAGACTACCTGCCCTCTTCTCAAACGCTaGGAAGTGAATGGGTGGCTGGTGTGGATGGGCCTG +
Preference number: 3 (lower is better)
Translates to: LCGQTTCPLLKR*EVNGWLVWMGL
Trigger: CAGGCCCATCCACACCAGCCACCCATTCACTTCCCAGCGTTTGAGAAGAGGGCAGGTAGTCTGGCCACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 72 bp CTACAAGAGCAACACACGCAGGTAGGGGAGGGAGGATaGGAGCTTGGAAGCGGCTCTGAAGGGGCAGTGTGT +
Preference number: 3 (lower is better)
Translates to: LQEQHTQVGEGG*ELGSGSEGAVC
Trigger: ACACACTGCCCCTTCAGAGCCGCTTCCAAGCTCCCATCCTCCCTCCCCTACCTGCGTGTGTTGCTCTTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR TCA 72 bp GACAAGTCCAACAGGGGGTTGGCAGGTTGGGGGAGCTaGGACAGGATATCAGCCTGCAGCTGGTCTCTGATC +
Preference number: 3 (lower is better)
Translates to: DKSNRGLAGWGS*DRISACSWSLI
Trigger: GATCAGAGACCAGCTGCAGGCTGATATCCTGTCTCAGCTCCCCCAACCTGCCAACCCCCTGTTGGACTTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 72 bp GAGCGAGGAGGGGGCGGACCCGGCCCTGCAGGAAACTaGCACACCAGTCTAGAGATACAACACAGTAAAATG +
Preference number: 3 (lower is better)
Translates to: ERGGGGPGPAGN*HTSLEIQHSKM
Trigger: CATTTTACTGTGTTGTATCTCTAGACTGGTGTGCCAGTTTCCTGCAGGGCCGGGTCCGCCCCCTCCTCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 72 bp CTCCCTGATGCAGCCAGCCTGCATCCTATACCCTCCTaGAGGCCAAGTATACAGGCAGTGAGGAGCCTCACT +
Preference number: 3 (lower is better)
Translates to: LPDAASLHPIPS*RPSIQAVRSLT
Trigger: AGTGAGGCTCCTCACTGCCTGTATACTTGGCCTCCAGGAGGGTATAGGATGCAGGCTGGCTGCATCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR TCA 72 bp GGACGCACACAGACTCACCGACCTCACTTGACACTATaGCGCCTACTCTATCATGCAAGGTCTCCGCTACCC +
Preference number: 3 (lower is better)
Translates to: GRTQTHRPHLTL*RLLYHARSPLP
Trigger: GGGTAGCGGAGACCTTGCATGATAGAGTAGGCGTCATAGTGTCAAGTGAGGTCGGTGAGTCTGTGTGCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR TCA 72 bp GGAGGAGCTGACCAGGAGCACCGGCTAAAGGTAGGATaGGAAGTGATACTCCTGTTTTCTGCCAGGGGTGCT +
Preference number: 3 (lower is better)
Translates to: GGADQEHRLKVG*EVILLFSARGA
Trigger: AGCACCCCTGGCAGAAAACAGGAGTATCACTTCTCATCCTACCTTTAGCCGGTGCTCCTGGTCAGCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR GCA 72 bp CCGACCTCACTTGACACTATGACGCCTACTCTATCATaGAAGGTCTCCGCTACCCTCAACAGGACCGTCAGC +
Preference number: 3 (lower is better)
Translates to: PTSLDTMTPTLS*KVSATLNRTVS
Trigger: GCTGACGGTCCTGTTGAGGGTAGCGGAGACCTTGCATGATAGAGTAGGCGTCATAGTGTCAAGTGAGGTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR GCA 72 bp GCTTGGGCAGTGCTGGGTACACATGTACCTTACCACTaGCTGATGGGCATGAGACAAGAAGCAGCAGCAGGA +
Preference number: 3 (lower is better)
Translates to: AWAVLGTHVPYH*LMGMRQEAAAG
Trigger: TCCTGCTGCTGCTTCTTGTCTCATGCCCATCAGGCAGTGGTAAGGTACATGTGTACCCAGCACTGCCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR TCA 72 bp GGAGCTGAGACAGGATATCAGCCTGCAGCTGGTCTCTaGTCCTCTGCCAAAGATCCAACTAGTCCAGGCATC +
Preference number: 3 (lower is better)
Translates to: GAETGYQPAAGL*SSAKDPTSPGI
Trigger: GATGCCTGGACTAGTTGGATCTTTGGCAGAGGATCAGAGACCAGCTGCAGGCTGATATCCTGTCTCAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR GCA 72 bp GACTCTCAAAGCATTTCCTCCCTGATGCAGCCAGCCTaGATCCTATACCCTCCTGGAGGCCAAGTATACAGG +
Preference number: 3 (lower is better)
Translates to: DSQSISSLMQPA*ILYPPGGQVYR
Trigger: CCTGTATACTTGGCCTCCAGGAGGGTATAGGATGCAGGCTGGCTGCATCAGGGAGGAAATGCTTTGAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR TCA 72 bp CTTAGAGACATACGGACTCTCAAAGCATTTCCTCCCTaGTGCAGCCAGCCTGCATCCTATACCCTCCTGGAG +
Preference number: 3 (lower is better)
Translates to: LRDIRTLKAFPP*CSQPASYTLLE
Trigger: CTCCAGGAGGGTATAGGATGCAGGCTGGCTGCATCAGGGAGGAAATGCTTTGAGAGTCCGTATGTCTCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR GCA 72 bp ACTCATTTCCAAACATCAGAAGATGGGAGTCTATGCTaGTCGGGTCTCGTGCTGCCACCAGCAGCTCTTCTG +
Preference number: 3 (lower is better)
Translates to: THFQTSEDGSLC*SGLVLPPAALL
Trigger: CAGAAGAGCTGCTGGTGGCAGCACGAGACCCGAGCAGCATAGACTCCCATCTTCTGATGTTTGGAAATGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR GCA 72 bp GCAACTCATTTCCAAACATCAGAAGATGGGAGTCTATaGTGCTCGGGTCTCGTGCTGCCACCAGCAGCTCTT +
Preference number: 3 (lower is better)
Translates to: ATHFQTSEDGSL*CSGLVLPPAAL
Trigger: AAGAGCTGCTGGTGGCAGCACGAGACCCGAGCAGCATAGACTCCCATCTTCTGATGTTTGGAAATGAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 72 bp ACACAGAGCAAAGTAGCCTGCATTCAACAGAAGCCATaGGGTCTGGAGAACCCAGTGTCCAGAGAAGGACCA +
Preference number: 3 (lower is better)
Translates to: TQSKVACIQQKP*GLENPVSREGP
Trigger: TGGTCCTTCTCTGGACACTGGGTTCTCCAGACCCCATGGCTTCTGTTGAATGCAGGCTACTTTGCTCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 72 bp GTGATACTCCTGTTTTCTGCCAGGGGTGCTGGGATGTaGGGTGGGACAAGGTCCACAATCATTTACACAGAG +
Preference number: 3 (lower is better)
Translates to: VILLFSARGAGM*GGTRSTIIYTE
Trigger: CTCTGTGTAAATGATTGTGGACCTTGTCCCACCCCACATCCCAGCACCCCTGGCAGAAAACAGGAGTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CAA 90 bp ACAAGTCCAACAGGGGGTTGGCAGGTTGGGGGAGCTGAGACAGGATATCAGCCTAATAACAAGAATCAATaGGCAAACTCGGGTGCCACC +
Preference number: 3 (lower is better)
Translates to: TSPTGGWQVGGAETGYQPNNKNQ*ANSGAT
Trigger: GGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATT...AGGCTGATATCCTGTCTCAGCTCCCCCAACCTGCCAACCCCCTGTTGGACTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CAA 90 bp ACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAATAACAAGAATCAATaGGCAAACTCGGGTGCCACC +
Preference number: 3 (lower is better)
Translates to: THRGCGGCCRHTLVYNRENNKNQ*ANSGAT
Trigger: GGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATT...CTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CAA 90 bp AGGAAGGCGATGGTGCTGACCTCTATGGCCTACACCTGCCAGCCTGACCCTGGGTTTACTTCACTCCAGTaGACTCAAAGCAACTCATTT +
Preference number: 3 (lower is better)
Translates to: RKAMVLTSMAYTCQPDPGFTSLQ*TQSNSF
Trigger: AAATGAGTTGCTTTGAGTCAACTGGAGTGAAGTAAA...CCCAGGGTCAGGCTGGCAGGTGTAGGCCATAGAGGTCAGCACCATCGCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CAA 90 bp AGACAAGTCCAACAGGGGGTTGGCAGGTTGGGGGAGCTGAGACAGGATATCAGCGAAAAGGGATGGAGCTaGTTTTCAAGTAAACCTCTG +
Preference number: 3 (lower is better)
Translates to: RQVQQGVGRLGELRQDISEKGWS*FSSKPL
Trigger: CAGAGGTTTACTTGAAAACAAGCTCCATCCCTTTTC...GCTGATATCCTGTCTCAGCTCCCCCAACCTGCCAACCCCCTGTTGGACTTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR TCA 72 bp ATGACACAGGACGCACACAGACTCACCGACCTCACTTaGCACTATGACGCCTACTCTATCATGCAAGGTCTC +
Preference number: 3 (lower is better)
Translates to: MTQDAHRLTDLT*HYDAYSIMQGL
Trigger: GAGACCTTGCATGATAGAGTAGGCGTCATAGTGTCAAGTGAGGTCGGTGAGTCTGTGTGCGTCCTGTGTCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR TCA 72 bp TGCGTTCTAGCAAGGTCTGAGACCGTGGGAACGCCCTaGCACTATGCACATTCCATTTTGGCTTCAAACAGG +
Preference number: 3 (lower is better)
Translates to: CVLARSETVGTP*HYAHSILASNR
Trigger: CCTGTTTGAAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCACGGTCTCAGACCTTGCTAGAACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR GCA 72 bp CTCTTGCACTTCGGCCCCTCCAGGAACGTTAAATACTaGTTATGTCATATACTTTCCCACCCTTGCCCCCTC +
Preference number: 3 (lower is better)
Translates to: LLHFGPSRNVKY*LCHILSHPCPL
Trigger: GAGGGGGCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCCGAAGTGCAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR GCA 72 bp GATGGGCCTGGCTCACTCTCACAAGCACCTCTTGTCTaGTGTAGTTTCAGTCAGGATCCAGCTCATTTTCCA +
Preference number: 3 (lower is better)
Translates to: DGPGSLSQAPLV*CSFSQDPAHFP
Trigger: TGGAAAATGAGCTGGATCCTGACTGAAACTACAGCAGACAAGAGGTGCTTGTGAGAGTGAGCCAGGCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 72 bp CCGTGGGAACGCCCTGACACTATGCACATTCCATTTTaGCTTCAAACAGGAGATGAGATCCCTGTACCAAGG +
Preference number: 3 (lower is better)
Translates to: PWERPDTMHIPF*LQTGDEIPVPR
Trigger: CCTTGGTACAGGGATCTCATCTCCTGTTTGAAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CAA 90 bp AGACAAGTCCAACAGGGGGTTGGCAGGTTGGGGGAGCTGAGACAGGATATCAGCAATATATTATGTCACTaGGCATGGTGCTGGCAAAGA +
Preference number: 3 (lower is better)
Translates to: RQVQQGVGRLGELRQDISNILCH*AWCWQR
Trigger: TCTTTGCCAGCACCATGCCAAGTGACATAATATATT...GCTGATATCCTGTCTCAGCTCCCCCAACCTGCCAACCCCCTGTTGGACTTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CAA 90 bp AAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCCTCCCTCCGCCCGTCAATATATTATGTCACTaGGCATGGTGCTGGCAAAGA +
Preference number: 3 (lower is better)
Translates to: KQTAPSKDLKPALLPPPVNILCH*AWCWQR
Trigger: TCTTTGCCAGCACCATGCCAAGTGACATAATATATT...GACGGGCGGAGGGAGGAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR TCA 72 bp AGCAGCTCTTCTGGAGCAAAGGCCTGTAGTGATTGTTaGTGGCTTGTCAACCTCTTCCCATCACAGGTAGGT +
Preference number: 3 (lower is better)
Translates to: SSSSGAKACSDC*WLVNLFPSQVG
Trigger: ACCTACCTGTGATGGGAAGAGGTTGACAAGCCATCAACAATCACTACAGGCCTTTGCTCCAGAAGAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR GCA 72 bp ACAAAACAAAAACGAACCCACCGTGGCTGTGGAGGCTaGTGCAGGCACACACTGGTGTATAATAGAGAGAGT +
Preference number: 3 (lower is better)
Translates to: TKQKRTHRGCGG*CRHTLVYNRES
Trigger: ACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTGTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR CCA 72 bp TTGACTCAAAGCAACTCATTTCCAAACATCAGAAGATaGGAGTCTATGCTGCTCGGGTCTCGTGCTGCCACC +
Preference number: 3 (lower is better)
Translates to: LTQSNSFPNIRR*ESMLLGSRAAT
Trigger: GGTGGCAGCACGAGACCCGAGCAGCATAGACTCCCATCTTCTGATGTTTGGAAATGAGTTGCTTTGAGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CAA 90 bp AACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAAATATATTATGTCACTaGGCATGGTGCTGGCAAAGA +
Preference number: 3 (lower is better)
Translates to: NEPTVAVEAAAGTHWCIINILCH*AWCWQR
Trigger: TCTTTGCCAGCACCATGCCAAGTGACATAATATATT...TATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR CCA 72 bp CCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTaGTGTATAATAGAGAGAGTAATATATTATGTCACT +
Preference number: 3 (lower is better)
Translates to: PTVAVEAAAGTH*CIIERVIYYVT
Trigger: AGTGACATAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CAA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTAATAACAAGAATCAATaGGCAAACTCGGGTGCCACC +
Preference number: 3 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSNNKNQ*ANSGAT
Trigger: GGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATT...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CAA 90 bp GCTGGGTACACATGTACCTTACCACTGCCTGATGGGCATGAGACAAGAAGCAGCTTTACTTCACTCCAGTaGACTCAAAGCAACTCATTT +
Preference number: 3 (lower is better)
Translates to: AGYTCTLPLPDGHETRSSFTSLQ*TQSNSF
Trigger: AAATGAGTTGCTTTGAGTCAACTGGAGTGAAGTAAA...GCTGCTTCTTGTCTCATGCCCATCAGGCAGTGGTAAGGTACATGTGTACCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR TCA 72 bp GAGCTTCAGATTTCTCTCTTTAACGCAAGATGGACTTaGAGGCTACCTGGGCTCTTAGAGACATACGGACTC +
Preference number: 3 (lower is better)
Translates to: ELQISLFNARWT*RLPGLLETYGL
Trigger: GAGTCCGTATGTCTCTAAGAGCCCAGGTAGCCTTCAAGTCCATCTTGCGTTAAAGAGAGAAATCTGAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 72 bp ATACAAATTCTACCAAGACTGAAATCACAAAGGGCATaGACACAGACAGGACTGGGTCTGGCTGGCTGTATG +
Preference number: 3 (lower is better)
Translates to: IQILPRLKSQRA*TQTGLGLAGCM
Trigger: CATACAGCCAGCCAGACCCAGTCCTGTCTGTGTCCATGCCCTTTGTGATTTCAGTCTTGGTAGAATTTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CAA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTAATAACAAGAATCAATaGGCAAACTCGGGTGCCACC +
Preference number: 3 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPANNKNQ*ANSGAT
Trigger: GGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATT...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR TCA 72 bp CACTATGCACATTCCATTTTGGCTTCAAACAGGAGATaGGATCCCTGTACCAAGGAGACAGCAAGTCTGAGT +
Preference number: 3 (lower is better)
Translates to: HYAHSILASNRR*DPCTKETASLS
Trigger: ACTCAGACTTGCTGTCTCCTTGGTACAGGGATCTCATCTCCTGTTTGAAGCCAAAATGGAATGTGCATAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CCA 72 bp AATAACAAGAATCAATTGGCAAACTCGGGTGCCACCTaGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGA +
Preference number: 3 (lower is better)
Translates to: NNKNQLANSGAT*HKHLLSLWNQR
Trigger: TCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CAA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAATATATTATGTCACTaGGCATGGTGCTGGCAAAGA +
Preference number: 3 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPNILCH*AWCWQR
Trigger: TCTTTGCCAGCACCATGCCAAGTGACATAATATATT...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CAA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCAATATATTATGTCACTaGGCATGGTGCTGGCAAAGA +
Preference number: 3 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALNILCH*AWCWQR
Trigger: TCTTTGCCAGCACCATGCCAAGTGACATAATATATT...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR CCA 72 bp GCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATaGTCCAGTCTTTGCATGTACACACAGAATAACAAG +
Preference number: 3 (lower is better)
Translates to: AKNLQLALFHVT*SSLCMYTQNNK
Trigger: CTTGTTATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR CCA 72 bp TGGTGTATAATAGAGAGAGTAATATATTATGTCACTTaGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACT +
Preference number: 3 (lower is better)
Translates to: WCIIERVIYYVT*HGAGKEPPAGT
Trigger: AGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCTATTATACACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR GCA 72 bp AATAGAGAGAGTAATATATTATGTCACTTGGCATGGTaGTGGCAAAGAACCTCCAGCTGGCACTATTTCATG +
Preference number: 3 (lower is better)
Translates to: NRESNILCHLAW*WQRTSSWHYFM
Trigger: CATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CAA 90 bp TTTACTTCACTCCAGTTGACTCAAAGCAACTCATTTCCAAACATCAGAAGATGGAATAACAAGAATCAATaGGCAAACTCGGGTGCCACC +
Preference number: 3 (lower is better)
Translates to: FTSLQLTQSNSFPNIRRWNNKNQ*ANSGAT
Trigger: GGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATT...CCATCTTCTGATGTTTGGAAATGAGTTGCTTTGAGTCAACTGGAGTGAAGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR-3UTR CAA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAAAATATATTATGTCACTaGGCATGGTGCTGGCAAAGA +
Preference number: 3 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKNILCH*AWCWQR
Trigger: TCTTTGCCAGCACCATGCCAAGTGACATAATATATT...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR CCA 72 bp TATAATAGAGAGAGTAATATATTATGTCACTTGGCATaGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTC +
Preference number: 3 (lower is better)
Translates to: YNRESNILCHLA*CWQRTSSWHYF
Trigger: GAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCTATTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR-3UTR CAA 90 bp TTTACTTCACTCCAGTTGACTCAAAGCAACTCATTTCCAAACATCAGAAGATGGACACACTCTTTGGACTaGTCTTTCTACCTAAACAAA +
Preference number: 3 (lower is better)
Translates to: FTSLQLTQSNSFPNIRRWTHSLD*SFYLNK
Trigger: TTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGT...CCATCTTCTGATGTTTGGAAATGAGTTGCTTTGAGTCAACTGGAGTGAAGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGGGAGGAGCGAGGAGGGGGCGGACCCGGCCCTGCAGGAAACTGGCACACCAGTTGCAGTCTGGGCCATTaGAGAGGGCCCCCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: REERGGGGPGPAGNWHTSCSLGH*RGPPPW
Trigger: CCACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCA...ACTGGTGTGCCAGTTTCCTGCAGGGCCGGGTCCGCCCCCTCCTCGCTCCTCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CGCCTTTCTCCCTCCGGACCCCTCGCACCCTCCCTTCCCTGCTTAACAAGGCCTCCTTGTCCAGGGAGCTaGGCATCTCCTTCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: RLSPSGPLAPSLPCLTRPPCPGS*ASPSAA
Trigger: CGCGGCAGAAGGAGATGCGCAGCTCCCTGGACAAGG...AGGCCTTGTTAAGCAGGGAAGGGAGGGTGCGAGGGGTCCGGAGGGAGAAAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCCTCGAGGGCTCTTTCGCTGTGCAGCTCTaGGAGGAGGGGGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: SSSVSSPPGLWHVRLEGSFAVQL*EEGEGA
Trigger: CGCCCCTTCCCCCTCCTCGCAGAGCTGCACAGCGAA...AGAGCCCTCGAGGCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp GAGCGAGGAGGGGGCGGACCCGGCCCTGCAGGAAACTGGCACACCAGTCTAGAGGGATATCACCGTCTGTaGAGGTGGGGCTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ERGGGGPGPAGNWHTSLEGYHRL*RWGWAK
Trigger: CTTTGCCCAGCCCCACCTCCACAGACGGTGATATCC...CTCTAGACTGGTGTGCCAGTTTCCTGCAGGGCCGGGTCCGCCCCCTCCTCGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
CDS-3UTR TCA 90 bp GGATGGGAGCTTGGAAGCGGCTCTGAAGGGGCAGTGTGTGTGTATGTCCCAGGTCCCCGCCGTGGCCTCTaGGTCCACAGGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GWELGSGSEGAVCVYVPGPRRGL*VHRSAE
Trigger: CTCTGCAGACCTGTGGACTCAGAGGCCACGGCGGGG...ACCTGGGACATACACACACACTGCCCCTTCAGAGCCGCTTCCAAGCTCCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AGGGAGGAGCGAGGAGGGGGCGGACCCGGCCCTGCAGGAAACTGGCACACCAGTAGCTCTTTGACCTTCTaGTCCAGTTGTTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: REERGGGGPGPAGNWHTSSSLTF*SSCSRS
Trigger: GGAGCGGGAACAACTGGAGCAGAAGGTCAAAGAGCT...ACTGGTGTGCCAGTTTCCTGCAGGGCCGGGTCCGCCCCCTCCTCGCTCCTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GAGCGAGGAGGGGGCGGACCCGGCCCTGCAGGAAACTGGCACACCAGTCTAGAGAATTTGGACAGCCTCTaGCCCAGGCCCAGTGACCTT +
Preference number: 4 (lower is better)
Translates to: ERGGGGPGPAGNWHTSLENLDSL*PRPSDL
Trigger: AAGGTCACTGGGCCTGGGGCAGAGGCTGTCCAAATT...CTCTAGACTGGTGTGCCAGTTTCCTGCAGGGCCGGGTCCGCCCCCTCCTCGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp GAGCGAGGAGGGGGCGGACCCGGCCCTGCAGGAAACTGGCACACCAGTCTAGAGTTTTGGTGCAGCAGGTaGGGTAACGGTACGGCTCTC +
Preference number: 4 (lower is better)
Translates to: ERGGGGPGPAGNWHTSLEFWCSR*GNGTAL
Trigger: GAGAGCCGTACCGTTACCCCACCTGCTGCACCAAAA...CTCTAGACTGGTGTGCCAGTTTCCTGCAGGGCCGGGTCCGCCCCCTCCTCGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
CDS-3UTR CCA 90 bp CGGCAGAGAGGCAGCTGTAGGTGTAGACAGACAGCTGGAGACACAGTCGCTTGGTGCAGTCTGGGCCATTaGAGAGGGCCCCCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RQRGSCRCRQTAGDTVAWCSLGH*RGPPPW
Trigger: CCACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCA...CCAAGCGACTGTGTCTCCAGCTGTCTGTCTACACCTACAGCTGCCTCTCTGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp CGCCTTTCTCCCTCCGGACCCCTCGCACCCTCCCTTCCCTGCTTAACAAGGCCTGGCCTCTGGATAAGCTaGGGAGCTGCAAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: RLSPSGPLAPSLPCLTRPGLWIS*GAASMG
Trigger: TCCCATGCTTGCAGCTCCTCAGCTTATCCAGAGGCC...AGGCCTTGTTAAGCAGGGAAGGGAGGGTGCGAGGGGTCCGGAGGGAGAAAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AGGGAGGAGCGAGGAGGGGGCGGACCCGGCCCTGCAGGAAACTGGCACACCAGTTCTAAGCAGTCCAGATaGTACACACGGGAACACGTG +
Preference number: 4 (lower is better)
Translates to: REERGGGGPGPAGNWHTSSKQSR*YTREHV
Trigger: CACGTGTTCCCGTGTGTATCATCTGGACTGCTTAGA...ACTGGTGTGCCAGTTTCCTGCAGGGCCGGGTCCGCCCCCTCCTCGCTCCTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp CAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCCCCCGCCGTGGCCTCTaGGTCCACAGGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QKKSGFALLASPRHQDCGPRRGL*VHRSAE
Trigger: CTCTGCAGACCTGTGGACTCAGAGGCCACGGCGGGG...GCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AGGGAGGAGCGAGGAGGGGGCGGACCCGGCCCTGCAGGAAACTGGCACACCAGTAGTGGCTGTAGTGGCTaGTGCTGTGCTGTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: REERGGGGPGPAGNWHTSSGCSG*CCAVCS
Trigger: ACTACAAACAGCACAGCAGCAGCCACTACAGCCACT...ACTGGTGTGCCAGTTTCCTGCAGGGCCGGGTCCGCCCCCTCCTCGCTCCTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCCTCGAGGGCTCTGGTTACAGTTCGCTGTaGAGCTCTGCGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SSSVSSPPGLWHVRLEGSGYSSL*SSARRG
Trigger: CCCCCTCCTCGCAGAGCTGCACAGCGAACTGTAACC...AGAGCCCTCGAGGCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGGGAGGAGCGAGGAGGGGGCGGACCCGGCCCTGCAGGAAACTGGCACACCAGTCCATGGGGAACGTTTTaGCTATGGTTGCAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: REERGGGGPGPAGNWHTSPWGTF*LWLQSV
Trigger: GACAGACTGCAACCATAGCCAAAACGTTCCCCATGG...ACTGGTGTGCCAGTTTCCTGCAGGGCCGGGTCCGCCCCCTCCTCGCTCCTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGTGTCCAGAGAAGGACCAACTGGTCCGTCCTACTCCTGCCCCTGGGAGGAATGAGGGGGAGTGCAGTCTaGGCCATTGGAGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SVQRRTNWSVLLLPLGGMRGSAV*AIGEGP
Trigger: GGGGCCCTCTCCAATGGCCCAGACTGCACTCCCCCT...CATTCCTCCCAGGGGCAGGAGTAGGACGGACCAGTTGGTCCTTCTCTGGACACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTGGTCTGCTCAGCCCACCCACCTGCTGCGGTTGCTGCTaGTGCAGTGGCTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: WLYAWWSLLTSGLLSPPTCCGCC*CSGCSG
Trigger: GCCACTACAGCCACTGCAGCAGCAGCAACCGCAGCA...GGTGGGTGGGCTGAGCAGACCAGAAGTCAGCAAGCTCCACCACGCATACAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGTTCGCTGTGCAGCTCTaGGAGGAGGGGGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: THRGCGGCCRHTLVYNREFAVQL*EEGEGA
Trigger: CGCCCCTTCCCCCTCCTCGCAGAGCTGCACAGCGAA...CTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CGCCTTTCTCCCTCCGGACCCCTCGCACCCTCCCTTCCCTGCTTAACAAGGCCTAATTTGGACAGCCTCTaGCCCAGGCCCAGTGACCTT +
Preference number: 4 (lower is better)
Translates to: RLSPSGPLAPSLPCLTRPNLDSL*PRPSDL
Trigger: AAGGTCACTGGGCCTGGGGCAGAGGCTGTCCAAATT...AGGCCTTGTTAAGCAGGGAAGGGAGGGTGCGAGGGGTCCGGAGGGAGAAAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CGCCTTTCTCCCTCCGGACCCCTCGCACCCTCCCTTCCCTGCTTAACAAGGCCTGGGCTGAGGAGGTGTTaGTTGAACCTGCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: RLSPSGPLAPSLPCLTRPGLRRC*LNLQSD
Trigger: GTCACTCTGCAGGTTCAAGCAACACCTCCTCAGCCC...AGGCCTTGTTAAGCAGGGAAGGGAGGGTGCGAGGGGTCCGGAGGGAGAAAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATTGCAGTCTGGGCCATTaGAGAGGGCCCCCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: KRTHRGCGGCCRHTLVYNCSLGH*RGPPPW
Trigger: CCACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCA...ATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATCCTTGTCCAGGGAGCTaGGCATCTCCTTCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: QKRTHRGCGGCCRHTLVYPCPGS*ASPSAA
Trigger: CGCGGCAGAAGGAGATGCGCAGCTCCCTGGACAAGG...ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATGAGGAGCTGCAAGCATaGGAGGAGGCGCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: QKRTHRGCGGCCRHTLVYEELQA*EEALER
Trigger: TCGCTCCAGCGCCTCCTCCCATGCTTGCAGCTCCTC...ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CACCTGACTGCAACTCACCCTGGGCTAAGAGCAAGAACACTGGAGAGGGGTGCAGAGGAGCTGCAAGCATaGGAGGAGGCGCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: HLTATHPGLRARTLERGAEELQA*EEALER
Trigger: TCGCTCCAGCGCCTCCTCCCATGCTTGCAGCTCCTC...TGCACCCCTCTCCAGTGTTCTTGCTCTTAGCCCAGGGTGAGTTGCAGTCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACAGACAGGACTGGGTCTGGCTGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTGAGGAGCTGCAAGCATaGGAGGAGGCGCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: TDRTGSGWLYAWWSLLTSEELQA*EEALER
Trigger: TCGCTCCAGCGCCTCCTCCCATGCTTGCAGCTCCTC...AGAAGTCAGCAAGCTCCACCACGCATACAGCCAGCCAGACCCAGTCCTGTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGGAAGGCGATGGTGCTGACCTCTATGGCCTACACCTGCCAGCCTGACCCTGGGGGGTGGATGGAATTCTaGGATGTGGGGAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: RKAMVLTSMAYTCQPDPGGWMEF*DVGRVV
Trigger: CACAACCCTCCCCACATCCCAGAATTCCATCCACCC...CCCAGGGTCAGGCTGGCAGGTGTAGGCCATAGAGGTCAGCACCATCGCCTTCCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CGGCAGAGAGGCAGCTGTAGGTGTAGACAGACAGCTGGAGACACAGTCGCTTGGCACCGTCTGTGGAGGTaGGGCTGGGCAAAGACACAG +
Preference number: 4 (lower is better)
Translates to: RQRGSCRCRQTAGDTVAWHRLWR*GWAKTQ
Trigger: CTGTGTCTTTGCCCAGCCCCACCTCCACAGACGGTG...CCAAGCGACTGTGTCTCCAGCTGTCTGTCTACACCTACAGCTGCCTCTCTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
CDS-3UTR CCA 90 bp TGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAATGCAGTCTGGGCCATTaGAGAGGGCCCCCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: WQTRVPPGTSIFSLSGTKCSLGH*RGPPPW
Trigger: CCACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCA...TTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CGCCTTTCTCCCTCCGGACCCCTCGCACCCTCCCTTCCCTGCTTAACAAGGCCTCAACAGAGGCAGGCATaGTCGCAGTTGCTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: RLSPSGPLAPSLPCLTRPQQRQA*SQLLLS
Trigger: TGAAAGCAGCAACTGCGACCATGCCTGCCTCTGTTG...AGGCCTTGTTAAGCAGGGAAGGGAGGGTGCGAGGGGTCCGGAGGGAGAAAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AGTGTCCAGAGAAGGACCAACTGGTCCGTCCTACTCCTGCCCCTGGGAGGAATGGGCCTCTGGATAAGCTaGGGAGCTGCAAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: SVQRRTNWSVLLLPLGGMGLWIS*GAASMG
Trigger: TCCCATGCTTGCAGCTCCTCAGCTTATCCAGAGGCC...CATTCCTCCCAGGGGCAGGAGTAGGACGGACCAGTTGGTCCTTCTCTGGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AGCGGCTCTGAAGGGGCAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCAGGCAAAGACACAGGCTaGACAGGTGCAGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SGSEGAVCVYVPGGPRYAGKDTG*TGAGKV
Trigger: CACTTTCCCTGCACCTGTTCAGCCTGTGTCTTTGCC...TGCGTACCTGGGACCACCTGGGACATACACACACACTGCCCCTTCAGAGCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
CDS-3UTR GCA 90 bp CAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCTGCTGCGGTTGCTGCTaGTGCAGTGGCTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: QKKSGFALLASPRHQDCGCCGCC*CSGCSG
Trigger: GCCACTACAGCCACTGCAGCAGCAGCAACCGCAGCA...GCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AGACAAGTCCAACAGGGGGTTGGCAGGTTGGGGGAGCTGAGACAGGATATCAGCTGCTGCGGTTGCTGCTaGTGCAGTGGCTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: RQVQQGVGRLGELRQDISCCGCC*CSGCSG
Trigger: GCCACTACAGCCACTGCAGCAGCAGCAACCGCAGCA...GCTGATATCCTGTCTCAGCTCCCCCAACCTGCCAACCCCCTGTTGGACTTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATTGCGGTTGCTGCGGTTaGTGCTGCTGCAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QKRTHRGCGGCCRHTLVYCGCCG*CCCSGC
Trigger: ACAGCCACTGCAGCAGCAGCAACCGCAGCAACCGCA...ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCTGCGGTTGCTGCGGTTaGTGCTGCTGCAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QKKSGFALLASPRHQDCGCGCCG*CCCSGC
Trigger: ACAGCCACTGCAGCAGCAGCAACCGCAGCAACCGCA...GCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACAGACAGGACTGGGTCTGGCTGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTTGCGGTTGCTGCGGTTaGTGCTGCTGCAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TDRTGSGWLYAWWSLLTSCGCCG*CCCSGC
Trigger: ACAGCCACTGCAGCAGCAGCAACCGCAGCAACCGCA...AGAAGTCAGCAAGCTCCACCACGCATACAGCCAGCCAGACCCAGTCCTGTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCGGTTACAGTTCGCTGTaGAGCTCTGCGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: QKKSGFALLASPRHQDCGGYSSL*SSARRG
Trigger: CCCCCTCCTCGCAGAGCTGCACAGCGAACTGTAACC...GCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTGGTCTGCTCAGCCCACCCACCGGGTGGATGGAATTCTaGGATGTGGGGAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: WLYAWWSLLTSGLLSPPTGWMEF*DVGRVV
Trigger: CACAACCCTCCCCACATCCCAGAATTCCATCCACCC...GGTGGGTGGGCTGAGCAGACCAGAAGTCAGCAAGCTCCACCACGCATACAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCCTCGAGGGCTCTACAATGCTGGTGAGCTaGGCCATGGGGAACGTTTTG +
Preference number: 4 (lower is better)
Translates to: SSSVSSPPGLWHVRLEGSTMLVS*AMGNVL
Trigger: CAAAACGTTCCCCATGGCCCAGCTCACCAGCATTGT...AGAGCCCTCGAGGCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGTGCAGTCTGGGCCATTaGAGAGGGCCCCCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: NQLANSGATWHKHLLSLWCSLGH*RGPPPW
Trigger: CCACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCA...CCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AACAAACCAGAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGATGCAGTCTGGGCCATTaGAGAGGGCCCCCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: NKPEQCLTDDTGRTQTHRCSLGH*RGPPPW
Trigger: CCACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCA...TCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTCTGGTTTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAAGGGGGAGTGCAGTCTaGGCCATTGGAGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: WQTRVPPGTSIFSLSGTKRGSAV*AIGEGP
Trigger: GGGGCCCTCTCCAATGGCCCAGACTGCACTCCCCCT...TTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAGGGGGAGTGCAGTCTaGGCCATTGGAGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: NWQTRVPPGTSIFSLSGTRGSAV*AIGEGP
Trigger: GGGGCCCTCTCCAATGGCCCAGACTGCACTCCCCCT...GGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp GGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGACCCCGCCGTGGCCTCTaGGTCCACAGGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GATWHKHLLSLWNQRTKRPRRGL*VHRSAE
Trigger: CTCTGCAGACCTGTGGACTCAGAGGCCACGGCGGGG...TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp TGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCCCCGCCGTGGCCTCTaGGTCCACAGGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: WHGAGKEPPAGTISCNMVPRRGL*VHRSAE
Trigger: CTCTGCAGACCTGTGGACTCAGAGGCCACGGCGGGG...GACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CGCCTTTCTCCCTCCGGACCCCTCGCACCCTCCCTTCCCTGCTTAACAAGGCCTGCATTCTGTGGATCCTaGTTCATTTGGGCAACCAGT +
Preference number: 4 (lower is better)
Translates to: RLSPSGPLAPSLPCLTRPAFCGS*FIWATS
Trigger: ACTGGTTGCCCAAATGAAGCAGGATCCACAGAATGC...AGGCCTTGTTAAGCAGGGAAGGGAGGGTGCGAGGGGTCCGGAGGGAGAAAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCCTCGAGGGCTCTAGTGGCTGTAGTGGCTaGTGCTGTGCTGTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: SSSVSSPPGLWHVRLEGSSGCSG*CCAVCS
Trigger: ACTACAAACAGCACAGCAGCAGCCACTACAGCCACT...AGAGCCCTCGAGGCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATATGCTGCGGTTGCTGCTaGTGCAGTGGCTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: NEPTVAVEAAAGTHWCIICCGCC*CSGCSG
Trigger: GCCACTACAGCCACTGCAGCAGCAGCAACCGCAGCA...TATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATATGCGGTTGCTGCGGTTaGTGCTGCTGCAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: NEPTVAVEAAAGTHWCIICGCCG*CCCSGC
Trigger: ACAGCCACTGCAGCAGCAGCAACCGCAGCAACCGCA...TATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGATAAGCTGAGGAGCTaGAAGCATGGGAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: PTVAVEAAAGTHWCIIERDKLRS*KHGRRR
Trigger: GCGCCTCCTCCCATGCTTGCAGCTCCTCAGCTTATC...TCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AAACAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGGATAAGCTGAGGAGCTaGAAGCATGGGAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: KQKRTHRGCGGCCRHTLVDKLRS*KHGRRR
Trigger: GCGCCTCCTCCCATGCTTGCAGCTCCTCAGCTTATC...CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCCCTTGTCCAGGGAGCTaGGCATCTCCTTCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: NWQTRVPPGTSIFSLSGTPCPGS*ASPSAA
Trigger: CGCGGCAGAAGGAGATGCGCAGCTCCCTGGACAAGG...GGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCTTCGCTGTGCAGCTCTaGGAGGAGGGGGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: GMVLAKNLQLALFHVTWSFAVQL*EEGEGA
Trigger: CGCCCCTTCCCCCTCCTCGCAGAGCTGCACAGCGAA...GGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCCTCGAGGGCTCTGACAATGGCTGTATCTaGAACTTGTCCGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SSSVSSPPGLWHVRLEGSDNGCI*NLSGCS
Trigger: AGAGCAGCCGGACAAGTTCCAGATACAGCCATTGTC...AGAGCCCTCGAGGCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCTCTGGGCCACAGGCTTaGGTCGAACCTGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: QKKSGFALLASPRHQDCGSGPQA*VEPVEG
Trigger: TCCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGA...GCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCCTCCCTCCGCCCGTCTCTGGGCCACAGGCTTaGGTCGAACCTGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: KQTAPSKDLKPALLPPPVSGPQA*VEPVEG
Trigger: TCCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGA...GACGGGCGGAGGGAGGAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCCTCGAGGGCTCTAGGGAGTCTGGTCCCTaGAGTAGCTATGACAATGCT +
Preference number: 4 (lower is better)
Translates to: SSSVSSPPGLWHVRLEGSRESGP*SSYDNA
Trigger: AGCATTGTCATAGCTACTCCAGGGACCAGACTCCCT...AGAGCCCTCGAGGCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACAAGTCCAACAGGGGGTTGGCAGGTTGGGGGAGCTGAGACAGGATATCAGCCTCTGTGGAGGTGGGGCTaGGCAAAGACACAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: TSPTGGWQVGGAETGYQPLWRWG*AKTQAE
Trigger: TTCAGCCTGTGTCTTTGCCCAGCCCCACCTCCACAG...AGGCTGATATCCTGTCTCAGCTCCCCCAACCTGCCAACCCCCTGTTGGACTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
CDS-3UTR CCA 90 bp CAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCGGATATCACCGTCTGTaGAGGTGGGGCTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: QKKSGFALLASPRHQDCGGYHRL*RWGWAK
Trigger: CTTTGCCCAGCCCCACCTCCACAGACGGTGATATCC...GCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp GGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGGGGGAGTGCAGTCTaGGCCATTGGAGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GMVLAKNLQLALFHVTWSRGSAV*AIGEGP
Trigger: GGGGCCCTCTCCAATGGCCCAGACTGCACTCCCCCT...GGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAAGGGGGAGTGCAGTCTaGGCCATTGGAGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: INWQTRVPPGTSIFSLSGRGSAV*AIGEGP
Trigger: GGGGCCCTCTCCAATGGCCCAGACTGCACTCCCCCT...TCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AAACAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGGCAATGGTAGGTCTCTaGCCCACAACAGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: KQKRTHRGCGGCCRHTLVAMVGL*PTTEAG
Trigger: GCCTGCCTCTGTTGTGGGCCAGAGACCTACCATTGC...CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGGCTCAGAAAGAGAGAGGACCCTTTAGGGGAGGAAGGCGATGGTGCTGACCTCCTGAGCACAGCCTTCTaGCTGTTGATGGCGGTCACC +
Preference number: 4 (lower is better)
Translates to: WLRKREDPLGEEGDGADLLSTAF*LLMAVT
Trigger: GGTGACCGCCATCAACAGCCAGAAGGCTGTGCTCAG...GAGGTCAGCACCATCGCCTTCCTCCCCTAAAGGGTCCTCTCTCTTTCTGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATGGCCTCTGGATAAGCTaGGGAGCTGCAAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: KRTHRGCGGCCRHTLVYNGLWIS*GAASMG
Trigger: TCCCATGCTTGCAGCTCCTCAGCTTATCCAGAGGCC...ATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp CAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCCTAAGCTGTACAGTCTaGGGTCCAGGGAGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: QKKSGFALLASPRHQDCGLSCTV*GPGSLV
Trigger: GACCAGACTCCCTGGACCTCAGACTGTACAGCTTAG...GCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AAACAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGCTAAGCTGTACAGTCTaGGGTCCAGGGAGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: KQKRTHRGCGGCCRHTLVLSCTV*GPGSLV
Trigger: GACCAGACTCCCTGGACCTCAGACTGTACAGCTTAG...CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCCTCCCTCCGCCCGTCCTAAGCTGTACAGTCTaGGGTCCAGGGAGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: KQTAPSKDLKPALLPPPVLSCTV*GPGSLV
Trigger: GACCAGACTCCCTGGACCTCAGACTGTACAGCTTAG...GACGGGCGGAGGGAGGAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp ATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCTCTAAGCAGTCCAGATaGTACACACGGGAACACGTG +
Preference number: 4 (lower is better)
Translates to: IRLCSSSVSSPPGLWHVRSKQSR*YTREHV
Trigger: CACGTGTTCCCGTGTGTATCATCTGGACTGCTTAGA...GCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp ATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCTTTAGCATCTGGTCCTaGCATCTGGGACAGATCCAC +
Preference number: 4 (lower is better)
Translates to: IRLCSSSVSSPPGLWHVRFSIWS*HLGQIH
Trigger: GTGGATCTGTCCCAGATGTCAGGACCAGATGCTAAA...GCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCCCCGCCGTGGCCTCTaGGTCCACAGGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSPRRGL*VHRSAE
Trigger: CTCTGCAGACCTGTGGACTCAGAGGCCACGGCGGGG...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAATGCGGTTGCTGCGGTTaGTGCTGCTGCAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: WQTRVPPGTSIFSLSGTKCGCCG*CCCSGC
Trigger: ACAGCCACTGCAGCAGCAGCAACCGCAGCAACCGCA...TTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AAACAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTCTGCCGCGCCAGGATaGTGCTCTTCATCTCCATAC +
Preference number: 4 (lower is better)
Translates to: KQKRTHRGCGGCCRHTLVSAAPG*CSSSPY
Trigger: GTATGGAGATGAAGAGCAGCATCCTGGCGCGGCAGA...CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGGCTCAGAAAGAGAGAGGACCCTTTAGGGGAGGAAGGCGATGGTGCTGACCTCTCTGCCGCGCCAGGATaGTGCTCTTCATCTCCATAC +
Preference number: 4 (lower is better)
Translates to: WLRKREDPLGEEGDGADLSAAPG*CSSSPY
Trigger: GTATGGAGATGAAGAGCAGCATCCTGGCGCGGCAGA...GAGGTCAGCACCATCGCCTTCCTCCCCTAAAGGGTCCTCTCTCTTTCTGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGACCTTGTCCAGGGAGCTaGGCATCTCCTTCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: INWQTRVPPGTSIFSLSGPCPGS*ASPSAA
Trigger: CGCGGCAGAAGGAGATGCGCAGCTCCCTGGACAAGG...TCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AACAAACCAGAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGACCTTGTCCAGGGAGCTaGGCATCTCCTTCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: NKPEQCLTDDTGRTQTHRPCPGS*ASPSAA
Trigger: CGCGGCAGAAGGAGATGCGCAGCTCCCTGGACAAGG...TCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTCTGGTTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATTCGCTGTGCAGCTCTaGGAGGAGGGGGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: VAVEAAAGTHWCIIERVIFAVQL*EEGEGA
Trigger: CGCCCCTTCCCCCTCCTCGCAGAGCTGCACAGCGAA...TATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GCTGGGTACACATGTACCTTACCACTGCCTGATGGGCATGAGACAAGAAGCAGCGGTTACAGTTCGCTGTaGAGCTCTGCGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: AGYTCTLPLPDGHETRSSGYSSL*SSARRG
Trigger: CCCCCTCCTCGCAGAGCTGCACAGCGAACTGTAACC...GCTGCTTCTTGTCTCATGCCCATCAGGCAGTGGTAAGGTACATGTGTACCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCGGTTACAGTTCGCTGTaGAGCTCTGCGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: NWQTRVPPGTSIFSLSGTGYSSL*SSARRG
Trigger: CCCCCTCCTCGCAGAGCTGCACAGCGAACTGTAACC...GGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AGACAAGTCCAACAGGGGGTTGGCAGGTTGGGGGAGCTGAGACAGGATATCAGCGGGCTGAGGAGGTGTTaGTTGAACCTGCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: RQVQQGVGRLGELRQDISGLRRC*LNLQSD
Trigger: GTCACTCTGCAGGTTCAAGCAACACCTCCTCAGCCC...GCTGATATCCTGTCTCAGCTCCCCCAACCTGCCAACCCCCTGTTGGACTTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATGGGCTGAGGAGGTGTTaGTTGAACCTGCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: QKRTHRGCGGCCRHTLVYGLRRC*LNLQSD
Trigger: GTCACTCTGCAGGTTCAAGCAACACCTCCTCAGCCC...ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCACAGGTCTAAAGGGACATCTGGGCCACAGGCTTaGGTCGAACCTGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: QCVCMSQVVPGTHRSKGTSGPQA*VEPVEG
Trigger: TCCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGA...TGTCCCTTTAGACCTGTGCGTACCTGGGACCACCTGGGACATACACACACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGCGGCTCTGAAGGGGCAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCACATGGGAGGAGGCGCTaGAGCGATAGGAATGTTATT +
Preference number: 4 (lower is better)
Translates to: SGSEGAVCVYVPGGPRYAHGRRR*SDRNVI
Trigger: AATAACATTCCTATCGCTCCAGCGCCTCCTCCCATG...TGCGTACCTGGGACCACCTGGGACATACACACACACTGCCCCTTCAGAGCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGGAGGAGCTGCAAGCATaGGAGGAGGCGCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: NQLANSGATWHKHLLSLWEELQA*EEALER
Trigger: TCGCTCCAGCGCCTCCTCCCATGCTTGCAGCTCCTC...CCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGACAAGTCCAACAGGGGGTTGGCAGGTTGGGGGAGCTGAGACAGGATATCAGCGGGTGGATGGAATTCTaGGATGTGGGGAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: RQVQQGVGRLGELRQDISGWMEF*DVGRVV
Trigger: CACAACCCTCCCCACATCCCAGAATTCCATCCACCC...GCTGATATCCTGTCTCAGCTCCCCCAACCTGCCAACCCCCTGTTGGACTTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCGGGTGGATGGAATTCTaGGATGTGGGGAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: QKKSGFALLASPRHQDCGGWMEF*DVGRVV
Trigger: CACAACCCTCCCCACATCCCAGAATTCCATCCACCC...GCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CACCTGACTGCAACTCACCCTGGGCTAAGAGCAAGAACACTGGAGAGGGGTGCACACGGACAGGGTGGATaGAATTCTGGGATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: HLTATHPGLRARTLERGAHGQGG*NSGMWG
Trigger: TCCCCACATCCCAGAATTCCATCCACCCTGTCCGTG...TGCACCCCTCTCCAGTGTTCTTGCTCTTAGCCCAGGGTGAGTTGCAGTCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AAACAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGCACGGACAGGGTGGATaGAATTCTGGGATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: KQKRTHRGCGGCCRHTLVHGQGG*NSGMWG
Trigger: TCCCCACATCCCAGAATTCCATCCACCCTGTCCGTG...CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGACACGGACAGGGTGGATaGAATTCTGGGATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PTVAVEAAAGTHWCIIERHGQGG*NSGMWG
Trigger: TCCCCACATCCCAGAATTCCATCCACCCTGTCCGTG...TCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACAGACAGGACTGGGTCTGGCTGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTCACGGACAGGGTGGATaGAATTCTGGGATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TDRTGSGWLYAWWSLLTSHGQGG*NSGMWG
Trigger: TCCCCACATCCCAGAATTCCATCCACCCTGTCCGTG...AGAAGTCAGCAAGCTCCACCACGCATACAGCCAGCCAGACCCAGTCCTGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCCTCGAGGGCTCTGTTCTCTTCTCGTTTTaGTTTTGGTGCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSSVSSPPGLWHVRLEGSVLFSF*FWCSRW
Trigger: CCACCTGCTGCACCAAAACCAAAACGAGAAGAGAAC...AGAGCCCTCGAGGCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp AAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATCTGTGGAGGTGGGGCTaGGCAAAGACACAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: KRTHRGCGGCCRHTLVYNLWRWG*AKTQAE
Trigger: TTCAGCCTGTGTCTTTGCCCAGCCCCACCTCCACAG...ATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp AACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGGATATCACCGTCTGTaGAGGTGGGGCTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: NEPTVAVEAAAGTHWCIIGYHRL*RWGWAK
Trigger: CTTTGCCCAGCCCCACCTCCACAGACGGTGATATCC...TATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp ATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCAGATCCACATGCCCTTaGGAATTGTTTTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: IRLCSSSVSSPPGLWHVRRSTCP*ELFSGA
Trigger: CGCCCCTGAAAACAATTCCCAAGGGCATGTGGATCT...GCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGTGTCCAGAGAAGGACCAACTGGTCCGTCCTACTCCTGCCCCTGGGAGGAATGTCTGGTCCTGACATCTaGGACAGATCCACATGCCCT +
Preference number: 4 (lower is better)
Translates to: SVQRRTNWSVLLLPLGGMSGPDI*DRSTCP
Trigger: AGGGCATGTGGATCTGTCCCAGATGTCAGGACCAGA...CATTCCTCCCAGGGGCAGGAGTAGGACGGACCAGTTGGTCCTTCTCTGGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTTGCAGTCTGGGCCATTaGAGAGGGCCCCCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: YVTWHGAGKEPPAGTISCCSLGH*RGPPPW
Trigger: CCACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCA...ACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCCCCGCCGTGGCCTCTaGGTCCACAGGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPAPRRGL*VHRSAE
Trigger: CTCTGCAGACCTGTGGACTCAGAGGCCACGGCGGGG...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCCTCGAGGGCTCTTGGGACAGATCCACATaGCCTTGGGAATTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: SSSVSSPPGLWHVRLEGSWDRST*PWELFS
Trigger: TGAAAACAATTCCCAAGGGCATGTGGATCTGTCCCA...AGAGCCCTCGAGGCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAAGCTCTTTGACCTTCTaGTCCAGTTGTTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PTVAVEAAAGTHWCIIERSSLTF*SSCSRS
Trigger: GGAGCGGGAACAACTGGAGCAGAAGGTCAAAGAGCT...TCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGGCTCAGAAAGAGAGAGGACCCTTTAGGGGAGGAAGGCGATGGTGCTGACCTCAGCTCTTTGACCTTCTaGTCCAGTTGTTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: WLRKREDPLGEEGDGADLSSLTF*SSCSRS
Trigger: GGAGCGGGAACAACTGGAGCAGAAGGTCAAAGAGCT...GAGGTCAGCACCATCGCCTTCCTCCCCTAAAGGGTCCTCTCTCTTTCTGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAGCTCTTTGACCTTCTaGTCCAGTTGTTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QKRTHRGCGGCCRHTLVYSSLTF*SSCSRS
Trigger: GGAGCGGGAACAACTGGAGCAGAAGGTCAAAGAGCT...ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AAACAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGAGCTCTTTGACCTTCTaGTCCAGTTGTTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KQKRTHRGCGGCCRHTLVSSLTF*SSCSRS
Trigger: GGAGCGGGAACAACTGGAGCAGAAGGTCAAAGAGCT...CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGCCGCGCCAGGATGCTaGTCTTCATCTCCATACATT +
Preference number: 4 (lower is better)
Translates to: PTVAVEAAAGTHWCIIERAAPGC*SSSPYI
Trigger: AATGTATGGAGATGAAGAGCAGCATCCTGGCGCGGC...TCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTTTCGCTGTGCAGCTCTaGGAGGAGGGGGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: YVTWHGAGKEPPAGTISCFAVQL*EEGEGA
Trigger: CGCCCCTTCCCCCTCCTCGCAGAGCTGCACAGCGAA...ACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAGGTTACAGTTCGCTGTaGAGCTCTGCGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SGATWHKHLLSLWNQRTKGYSSL*SSARRG
Trigger: CCCCCTCCTCGCAGAGCTGCACAGCGAACTGTAACC...TTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCCTCCCTCCGCCCGTCAGGCATGGTCGCAGTTaGTGCTTTCAAGACGAGAGG +
Preference number: 4 (lower is better)
Translates to: KQTAPSKDLKPALLPPPVRHGRS*CFQDER
Trigger: CCTCTCGTCTTGAAAGCAGCAACTGCGACCATGCCT...GACGGGCGGAGGGAGGAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCAGGCATGGTCGCAGTTaGTGCTTTCAAGACGAGAGG +
Preference number: 4 (lower is better)
Translates to: QKKSGFALLASPRHQDCGRHGRS*CFQDER
Trigger: CCTCTCGTCTTGAAAGCAGCAACTGCGACCATGCCT...GCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACAGACAGGACTGGGTCTGGCTGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTAGGCATGGTCGCAGTTaGTGCTTTCAAGACGAGAGG +
Preference number: 4 (lower is better)
Translates to: TDRTGSGWLYAWWSLLTSRHGRS*CFQDER
Trigger: CCTCTCGTCTTGAAAGCAGCAACTGCGACCATGCCT...AGAAGTCAGCAAGCTCCACCACGCATACAGCCAGCCAGACCCAGTCCTGTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGGCTCAGAAAGAGAGAGGACCCTTTAGGGGAGGAAGGCGATGGTGCTGACCTCCTGTGGAAGGAAGTTTaGGCGTGGAGTGAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: WLRKREDPLGEEGDGADLLWKEV*AWSESR
Trigger: CCTAGACTCACTCCACGCCCAAACTTCCTTCCACAG...GAGGTCAGCACCATCGCCTTCCTCCCCTAAAGGGTCCTCTCTCTTTCTGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGCTGTGGAAGGAAGTTTaGGCGTGGAGTGAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: THRGCGGCCRHTLVYNRELWKEV*AWSESR
Trigger: CCTAGACTCACTCCACGCCCAAACTTCCTTCCACAG...CTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCCTCCCTCCGCCCGTCCTGTGGAAGGAAGTTTaGGCGTGGAGTGAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: KQTAPSKDLKPALLPPPVLWKEV*AWSESR
Trigger: CCTAGACTCACTCCACGCCCAAACTTCCTTCCACAG...GACGGGCGGAGGGAGGAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATCTGTGGAAGGAAGTTTaGGCGTGGAGTGAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: QKRTHRGCGGCCRHTLVYLWKEV*AWSESR
Trigger: CCTAGACTCACTCCACGCCCAAACTTCCTTCCACAG...ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGGCCACACAAGGCAAGCATAGTGATTCTAGCCCAGGAACACCCAGGAAGCATGTCTGGGCCACAGGCTTaGGTCGAACCTGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RPHKASIVILAQEHPGSMSGPQA*VEPVEG
Trigger: TCCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGA...CATGCTTCCTGGGTGTTCCTGGGCTAGAATCACTATGCTTGCCTTGTGTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGCGGCTCTGAAGGGGCAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCAATAGGAATGTTATTCTaGGCCACAGGCTTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: SGSEGAVCVYVPGGPRYAIGMLF*ATGLGR
Trigger: TCGACCCAAGCCTGTGGCCCAGAATAACATTCCTAT...TGCGTACCTGGGACCACCTGGGACATACACACACACTGCCCCTTCAGAGCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCACAATGCTGGTGAGCTaGGCCATGGGGAACGTTTTG +
Preference number: 4 (lower is better)
Translates to: QKKSGFALLASPRHQDCGTMLVS*AMGNVL
Trigger: CAAAACGTTCCCCATGGCCCAGCTCACCAGCATTGT...GCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGTGTCCAGAGAAGGACCAACTGGTCCGTCCTACTCCTGCCCCTGGGAGGAATGCACCGCATTGTATTTTaGAGGACGACCTCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: SVQRRTNWSVLLLPLGGMHRIVF*RTTSLP
Trigger: CGGAAGAGAGGTCGTCCTCCAAAATACAATGCGGTG...CATTCCTCCCAGGGGCAGGAGTAGGACGGACCAGTTGGTCCTTCTCTGGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
CDS-3UTR CCA 90 bp AACAAACCAGAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGACACCGTCTGTGGAGGTaGGGCTGGGCAAAGACACAG +
Preference number: 4 (lower is better)
Translates to: NKPEQCLTDDTGRTQTHRHRLWR*GWAKTQ
Trigger: CTGTGTCTTTGCCCAGCCCCACCTCCACAGACGGTG...TCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTCTGGTTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp TCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAACACCGTCTGTGGAGGTaGGGCTGGGCAAAGACACAG +
Preference number: 4 (lower is better)
Translates to: SGATWHKHLLSLWNQRTKHRLWR*GWAKTQ
Trigger: CTGTGTCTTTGCCCAGCCCCACCTCCACAGACGGTG...TTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp CAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATTCTGGTCCTGACATCTaGGACAGATCCACATGCCCT +
Preference number: 4 (lower is better)
Translates to: QKRTHRGCGGCCRHTLVYSGPDI*DRSTCP
Trigger: AGGGCATGTGGATCTGTCCCAGATGTCAGGACCAGA...ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGTCTGGTCCTGACATCTaGGACAGATCCACATGCCCT +
Preference number: 4 (lower is better)
Translates to: THRGCGGCCRHTLVYNRESGPDI*DRSTCP
Trigger: AGGGCATGTGGATCTGTCCCAGATGTCAGGACCAGA...CTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACACAGAATAACAAGAATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATTGCAGTCTGGGCCATTaGAGAGGGCCCCCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: TQNNKNQLANSGATWHKHCSLGH*RGPPPW
Trigger: CCACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCA...ATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp GTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAAAGGGGGAGTGCAGTCTaGGCCATTGGAGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VPPGTSIFSLSGTKEPKERGSAV*AIGEGP
Trigger: GGGGCCCTCTCCAATGGCCCAGACTGCACTCCCCCT...TTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGGGGGAGTGCAGTCTaGGCCATTGGAGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPRGSAV*AIGEGP
Trigger: GGGGCCCTCTCCAATGGCCCAGACTGCACTCCCCCT...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGACAACAGAGGCAGGCATaGTCGCAGTTGCTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: PTVAVEAAAGTHWCIIERQQRQA*SQLLLS
Trigger: TGAAAGCAGCAACTGCGACCATGCCTGCCTCTGTTG...TCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCTTAGAACCGGCCTCTGGATAAGCTaGGGAGCTGCAAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: KRVVSIHTHLGRAALLRTGLWIS*GAASMG
Trigger: TCCCATGCTTGCAGCTCCTCAGCTTATCCAGAGGCC...GGTTCTAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp TCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAGGCCTCTGGATAAGCTaGGGAGCTGCAAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: SGATWHKHLLSLWNQRTKGLWIS*GAASMG
Trigger: TCCCATGCTTGCAGCTCCTCAGCTTATCCAGAGGCC...TTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp GGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCGGCCTCTGGATAAGCTaGGGAGCTGCAAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: GMVLAKNLQLALFHVTWSGLWIS*GAASMG
Trigger: TCCCATGCTTGCAGCTCCTCAGCTTATCCAGAGGCC...GGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp ACAGACAGGACTGGGTCTGGCTGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTACCCTAGAGACACCATaGAGGCAAGTTTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: TDRTGSGWLYAWWSLLTSTLETP*RQVSEG
Trigger: ACCCTCAGAAACTTGCCTTCATGGTGTCTCTAGGGT...AGAAGTCAGCAAGCTCCACCACGCATACAGCCAGCCAGACCCAGTCCTGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
CDS-3UTR TCA 90 bp CAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATTCTAAGCAGTCCAGATaGTACACACGGGAACACGTG +
Preference number: 4 (lower is better)
Translates to: QKRTHRGCGGCCRHTLVYSKQSR*YTREHV
Trigger: CACGTGTTCCCGTGTGTATCATCTGGACTGCTTAGA...ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp CAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATTTTAGCATCTGGTCCTaGCATCTGGGACAGATCCAC +
Preference number: 4 (lower is better)
Translates to: QKRTHRGCGGCCRHTLVYFSIWS*HLGQIH
Trigger: GTGGATCTGTCCCAGATGTCAGGACCAGATGCTAAA...ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AAACAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTTTAGCATCTGGTCCTaGCATCTGGGACAGATCCAC +
Preference number: 4 (lower is better)
Translates to: KQKRTHRGCGGCCRHTLVFSIWS*HLGQIH
Trigger: GTGGATCTGTCCCAGATGTCAGGACCAGATGCTAAA...CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp ATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTCCCCGCCGTGGCCTCTaGGTCCACAGGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: IYYVTWHGAGKEPPAGTIPRRGL*VHRSAE
Trigger: CTCTGCAGACCTGTGGACTCAGAGGCCACGGCGGGG...AATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGGCTGTAGTGGCTGCTaGTGTGCTGTTTGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: PTVAVEAAAGTHWCIIERGCSGC*CAVCSL
Trigger: CAAACTACAAACAGCACAGCAGCAGCCACTACAGCC...TCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCGGCTGTAGTGGCTGCTaGTGTGCTGTTTGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: QKKSGFALLASPRHQDCGGCSGC*CAVCSL
Trigger: CAAACTACAAACAGCACAGCAGCAGCCACTACAGCC...GCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGGCTCAGAAAGAGAGAGGACCCTTTAGGGGAGGAAGGCGATGGTGCTGACCTCGGCTGTAGTGGCTGCTaGTGTGCTGTTTGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: WLRKREDPLGEEGDGADLGCSGC*CAVCSL
Trigger: CAAACTACAAACAGCACAGCAGCAGCCACTACAGCC...GAGGTCAGCACCATCGCCTTCCTCCCCTAAAGGGTCCTCTCTCTTTCTGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACAGACAGGACTGGGTCTGGCTGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTAGTGGCTGTAGTGGCTaGTGCTGTGCTGTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: TDRTGSGWLYAWWSLLTSSGCSG*CCAVCS
Trigger: ACTACAAACAGCACAGCAGCAGCCACTACAGCCACT...AGAAGTCAGCAAGCTCCACCACGCATACAGCCAGCCAGACCCAGTCCTGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GAAGAAGAGAAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGGATAAGCTGAGGAGCTaGAAGCATGGGAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: EEEKRVVSIHTHLGRAALDKLRS*KHGRRR
Trigger: GCGCCTCCTCCCATGCTTGCAGCTCCTCAGCTTATC...CAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTTCTCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AACAAACCAGAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGAGATAAGCTGAGGAGCTaGAAGCATGGGAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: NKPEQCLTDDTGRTQTHRDKLRS*KHGRRR
Trigger: GCGCCTCCTCCCATGCTTGCAGCTCCTCAGCTTATC...TCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTCTGGTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCCTCGAGGGCTCTTGCTTGTTTTTCCTCTaGTTCTGGGTGGGATTTAAC +
Preference number: 4 (lower is better)
Translates to: SSSVSSPPGLWHVRLEGSCLFFL*FWVGFN
Trigger: GTTAAATCCCACCCAGAAGCAGAGGAAAAACAAGCA...AGAGCCCTCGAGGCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CGGCAGAGAGGCAGCTGTAGGTGTAGACAGACAGCTGGAGACACAGTCGCTTGGAACGGTACGGCTCTCTaGTTGTTTTTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RQRGSCRCRQTAGDTVAWNGTAL*LFFLCF
Trigger: GAAGCAGAGGAAAAACAAGCAGAGAGCCGTACCGTT...CCAAGCGACTGTGTCTCCAGCTGTCTGTCTACACCTACAGCTGCCTCTCTGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
CDS-3UTR GCA 90 bp GAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGACCTCACTTGGCCGCGCCAGGATGCTaGTCTTCATCTCCATACATT +
Preference number: 4 (lower is better)
Translates to: EQCLTDDTGRTQTHRPHLAAPGC*SSSPYI
Trigger: AATGTATGGAGATGAAGAGCAGCATCCTGGCGCGGC...CAAGTGAGGTCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTCCTTGTCCAGGGAGCTaGGCATCTCCTTCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: YVTWHGAGKEPPAGTISCPCPGS*ASPSAA
Trigger: CGCGGCAGAAGGAGATGCGCAGCTCCCTGGACAAGG...ACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAACCTTGTCCAGGGAGCTaGGCATCTCCTTCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: VPPGTSIFSLSGTKEPKEPCPGS*ASPSAA
Trigger: CGCGGCAGAAGGAGATGCGCAGCTCCCTGGACAAGG...TTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTTTCGCTGTGCAGCTCTaGGAGGAGGGGGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPAFAVQL*EEGEGA
Trigger: CGCCCCTTCCCCCTCCTCGCAGAGCTGCACAGCGAA...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAAGGAAGTTTGGGCGTaGAGTGAGTCTAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KRTHRGCGGCCRHTLVYNKEVWA*SESRRR
Trigger: CCTCCTCCTAGACTCACTCCACGCCCAAACTTCCTT...ATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACAAGTCCAACAGGGGGTTGGCAGGTTGGGGGAGCTGAGACAGGATATCAGCCTCATGGGAGGAGGCGCTaGAGCGATAGGAATGTTATT +
Preference number: 4 (lower is better)
Translates to: TSPTGGWQVGGAETGYQPHGRRR*SDRNVI
Trigger: AATAACATTCCTATCGCTCCAGCGCCTCCTCCCATG...AGGCTGATATCCTGTCTCAGCTCCCCCAACCTGCCAACCCCCTGTTGGACTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AAACAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGCATGGGAGGAGGCGCTaGAGCGATAGGAATGTTATT +
Preference number: 4 (lower is better)
Translates to: KQKRTHRGCGGCCRHTLVHGRRR*SDRNVI
Trigger: AATAACATTCCTATCGCTCCAGCGCCTCCTCCCATG...CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp GCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCCGAGGAGCTGCAAGCATaGGAGGAGGCGCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: APPGTLNTAYVIYFPTLAEELQA*EEALER
Trigger: TCGCTCCAGCGCCTCCTCCCATGCTTGCAGCTCCTC...GGCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp GTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAAGAGGAGCTGCAAGCATaGGAGGAGGCGCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: VPPGTSIFSLSGTKEPKEEELQA*EEALER
Trigger: TCGCTCCAGCGCCTCCTCCCATGCTTGCAGCTCCTC...TTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGGCCACACAAGGCAAGCATAGTGATTCTAGCCCAGGAACACCCAGGAAGCATGCACGGACAGGGTGGATaGAATTCTGGGATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RPHKASIVILAQEHPGSMHGQGG*NSGMWG
Trigger: TCCCCACATCCCAGAATTCCATCCACCCTGTCCGTG...CATGCTTCCTGGGTGTTCCTGGGCTAGAATCACTATGCTTGCCTTGTGTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCCCATGGGGAACGTTTTaGCTATGGTTGCAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: QKKSGFALLASPRHQDCGPWGTF*LWLQSV
Trigger: GACAGACTGCAACCATAGCCAAAACGTTCCCCATGG...GCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACAGACAGGACTGGGTCTGGCTGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTAGGGAGTCTGGTCCCTaGAGTAGCTATGACAATGCT +
Preference number: 4 (lower is better)
Translates to: TDRTGSGWLYAWWSLLTSRESGP*SSYDNA
Trigger: AGCATTGTCATAGCTACTCCAGGGACCAGACTCCCT...AGAAGTCAGCAAGCTCCACCACGCATACAGCCAGCCAGACCCAGTCCTGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAAGGGAGTCTGGTCCCTaGAGTAGCTATGACAATGCT +
Preference number: 4 (lower is better)
Translates to: PTVAVEAAAGTHWCIIERRESGP*SSYDNA
Trigger: AGCATTGTCATAGCTACTCCAGGGACCAGACTCCCT...TCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCTCCTCTGCTTCTGGGTaGGATTTAACTGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: IRLCSSSVSSPPGLWHVRSSASG*DLTVCF
Trigger: GAAACAGACAGTTAAATCCCACCCAGAAGCAGAGGA...GCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp CGGCAGAGAGGCAGCTGTAGGTGTAGACAGACAGCTGGAGACACAGTCGCTTGGGTTCTCTTCTCGTTTTaGTTTTGGTGCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RQRGSCRCRQTAGDTVAWVLFSF*FWCSRW
Trigger: CCACCTGCTGCACCAAAACCAAAACGAGAAGAGAAC...CCAAGCGACTGTGTCTCCAGCTGTCTGTCTACACCTACAGCTGCCTCTCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
CDS-3UTR CCA 90 bp GGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGACACCGTCTGTGGAGGTaGGGCTGGGCAAAGACACAG +
Preference number: 4 (lower is better)
Translates to: GATWHKHLLSLWNQRTKRHRLWR*GWAKTQ
Trigger: CTGTGTCTTTGCCCAGCCCCACCTCCACAGACGGTG...TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp GGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCGGATATCACCGTCTGTaGAGGTGGGGCTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GMVLAKNLQLALFHVTWSGYHRL*RWGWAK
Trigger: CTTTGCCCAGCCCCACCTCCACAGACGGTGATATCC...GGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp TGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTGGTCTGCTCAGCCCACCCACCCTGCAAAAATCCTCATaGATATCACCGTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: WLYAWWSLLTSGLLSPPTLQKSS*ISPSVE
Trigger: CTCCACAGACGGTGATATCCATGAGGATTTTTGCAG...GGTGGGTGGGCTGAGCAGACCAGAAGTCAGCAAGCTCCACCACGCATACAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
CDS-3UTR CCA 90 bp ACAGACAGGACTGGGTCTGGCTGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTAGATCCACATGCCCTTaGGAATTGTTTTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: TDRTGSGWLYAWWSLLTSRSTCP*ELFSGA
Trigger: CGCCCCTGAAAACAATTCCCAAGGGCATGTGGATCT...AGAAGTCAGCAAGCTCCACCACGCATACAGCCAGCCAGACCCAGTCCTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCCTCCCTCCGCCCGTCAGATCCACATGCCCTTaGGAATTGTTTTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: KQTAPSKDLKPALLPPPVRSTCP*ELFSGA
Trigger: CGCCCCTGAAAACAATTCCCAAGGGCATGTGGATCT...GACGGGCGGAGGGAGGAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCACAGGTCTAAAGGGACATCTGGTCCTGACATCTaGGACAGATCCACATGCCCT +
Preference number: 4 (lower is better)
Translates to: QCVCMSQVVPGTHRSKGTSGPDI*DRSTCP
Trigger: AGGGCATGTGGATCTGTCCCAGATGTCAGGACCAGA...TGTCCCTTTAGACCTGTGCGTACCTGGGACCACCTGGGACATACACACACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCTGTAGGAATGAACAATaGCTAAGGTTCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: IRLCSSSVSSPPGLWHVRCRNEQ*LRFQAK
Trigger: CTTGGCCTGGAACCTTAGCCATTGTTCATTCCTACA...GCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CACCTGACTGCAACTCACCCTGGGCTAAGAGCAAGAACACTGGAGAGGGGTGCATTAGTCTCTTCCCCCTaGTTACAGTTCGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: HLTATHPGLRARTLERGALVSSP*LQFAVQ
Trigger: CTGCACAGCGAACTGTAACCAGGGGGAAGAGACTAA...TGCACCCCTCTCCAGTGTTCTTGCTCTTAGCCCAGGGTGAGTTGCAGTCAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGTGTCCAGAGAAGGACCAACTGGTCCGTCCTACTCCTGCCCCTGGGAGGAATGATGGATATCACCCTTTaGCCAGTGTTCCTCATTGGC +
Preference number: 4 (lower is better)
Translates to: SVQRRTNWSVLLLPLGGMMDITL*PVFLIG
Trigger: GCCAATGAGGAACACTGGCCAAAGGGTGATATCCAT...CATTCCTCCCAGGGGCAGGAGTAGGACGGACCAGTTGGTCCTTCTCTGGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068702.14
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CGGCAGAGAGGCAGCTGTAGGTGTAGACAGACAGCTGGAGACACAGTCGCTTGGATGGATATCACCCTTTaGCCAGTGTTCCTCATTGGC +
Preference number: 4 (lower is better)
Translates to: RQRGSCRCRQTAGDTVAWMDITL*PVFLIG
Trigger: GCCAATGAGGAACACTGGCCAAAGGGTGATATCCAT...CCAAGCGACTGTGTCTCCAGCTGTCTGTCTACACCTACAGCTGCCTCTCTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068702.14
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp ATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCTCTCACTCAAAGCTGTaGTTTTGGCTTGGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: IRLCSSSVSSPPGLWHVRSHSKL*FWLGVH
Trigger: ATGAACTCCAAGCCAAAATCACAGCTTTGAGTGAGA...GCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AGCGGCTCTGAAGGGGCAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCATCTCACTCAAAGCTGTaGTTTTGGCTTGGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: SGSEGAVCVYVPGGPRYASHSKL*FWLGVH
Trigger: ATGAACTCCAAGCCAAAATCACAGCTTTGAGTGAGA...TGCGTACCTGGGACCACCTGGGACATACACACACACTGCCCCTTCAGAGCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AGGAAGGCGATGGTGCTGACCTCTATGGCCTACACCTGCCAGCCTGACCCTGGGTTTGTTTTCAGACTGTaGCAATGGCTGTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: RKAMVLTSMAYTCQPDPGFVFRL*QWLYLE
Trigger: TTCCAGATACAGCCATTGTCACAGTCTGAAAACAAA...CCCAGGGTCAGGCTGGCAGGTGTAGGCCATAGAGGTCAGCACCATCGCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp GAAGAAGAGAAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCTAAGCTGTACAGTCTaGGGTCCAGGGAGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: EEEKRVVSIHTHLGRAALLSCTV*GPGSLV
Trigger: GACCAGACTCCCTGGACCTCAGACTGTACAGCTTAG...CAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTTCTCTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCCCGCCGTGGCCTCTaGGTCCACAGGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKPRRGL*VHRSAE
Trigger: CTCTGCAGACCTGTGGACTCAGAGGCCACGGCGGGG...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCTGGAACTTGTCCGGCTaGTCTTGTTTGACTATCAGG +
Preference number: 4 (lower is better)
Translates to: QKKSGFALLASPRHQDCGWNLSG*SCLTIR
Trigger: CCTGATAGTCAAACAAGAGCAGCCGGACAAGTTCCA...GCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAATGCTGCGGTTGCTGCTaGTGCAGTGGCTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: VPPGTSIFSLSGTKEPKECCGCC*CSGCSG
Trigger: GCCACTACAGCCACTGCAGCAGCAGCAACCGCAGCA...TTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTTGCGGTTGCTGCGGTTaGTGCTGCTGCAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSCGCCG*CCCSGC
Trigger: ACAGCCACTGCAGCAGCAGCAACCGCAGCAACCGCA...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCCTCGAGGGCTCTACTGGCCACTTTTTCTaGAAACACTGCAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: SSSVSSPPGLWHVRLEGSTGHFF*KHCKNP
Trigger: AGGATTTTTGCAGTGTTTGCAGAAAAAGTGGCCAGT...AGAGCCCTCGAGGCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCTTGTCCAGGGAGCTaGGCATCTCCTTCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: TGKPTHSLDLSFYLNKRLPCPGS*ASPSAA
Trigger: CGCGGCAGAAGGAGATGCGCAGCTCCCTGGACAAGG...GAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTTTCGCTGTGCAGCTCTaGGAGGAGGGGGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: YIMSLGMVLAKNLQLALFFAVQL*EEGEGA
Trigger: CGCCCCTTCCCCCTCCTCGCAGAGCTGCACAGCGAA...AAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGGGAACGCCCTGACACTATGCACATTCCATTTTGGCTTCAAACAGGAGATGAGGGTTACAGTTCGCTGTaGAGCTCTGCGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: WERPDTMHIPFWLQTGDEGYSSL*SSARRG
Trigger: CCCCCTCCTCGCAGAGCTGCACAGCGAACTGTAACC...CTCATCTCCTGTTTGAAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGGGTTACAGTTCGCTGTaGAGCTCTGCGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LCHLAWCWQRTSSWHYFMGYSSL*SSARRG
Trigger: CCCCCTCCTCGCAGAGCTGCACAGCGAACTGTAACC...CATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAGGCATGGTCGCAGTTaGTGCTTTCAAGACGAGAGG +
Preference number: 4 (lower is better)
Translates to: NWQTRVPPGTSIFSLSGTRHGRS*CFQDER
Trigger: CCTCTCGTCTTGAAAGCAGCAACTGCGACCATGCCT...GGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACAGACAGGACTGGGTCTGGCTGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTAGGAGGGATAAACTGTaGTACTTTGATGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TDRTGSGWLYAWWSLLTSRRDKL*YFDGLR
Trigger: CCTCAGCCCATCAAAGTACCACAGTTTATCCCTCCT...AGAAGTCAGCAAGCTCCACCACGCATACAGCCAGCCAGACCCAGTCCTGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCAGGAGGGATAAACTGTaGTACTTTGATGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QKKSGFALLASPRHQDCGRRDKL*YFDGLR
Trigger: CCTCAGCCCATCAAAGTACCACAGTTTATCCCTCCT...GCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAAAGGAAGTTTGGGCGTaGAGTGAGTCTAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: WQTRVPPGTSIFSLSGTKKEVWA*SESRRR
Trigger: CCTCCTCCTAGACTCACTCCACGCCCAAACTTCCTT...TTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGGCCACACAAGGCAAGCATAGTGATTCTAGCCCAGGAACACCCAGGAAGCATGCTGTGGAAGGAAGTTTaGGCGTGGAGTGAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: RPHKASIVILAQEHPGSMLWKEV*AWSESR
Trigger: CCTAGACTCACTCCACGCCCAAACTTCCTTCCACAG...CATGCTTCCTGGGTGTTCCTGGGCTAGAATCACTATGCTTGCCTTGTGTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTGGGCCACAGGCTTaGGTCGAACCTGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: HGAGKEPPAGTISCNMVQSGPQA*VEPVEG
Trigger: TCCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGA...CTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACTCTGTACTTTCCAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCATCTGGGCCACAGGCTTaGGTCGAACCTGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: TLYFPEEIRLCSSSVSSPSGPQA*VEPVEG
Trigger: TCCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGA...TGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTGGAAAGTACAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CACCTGACTGCAACTCACCCTGGGCTAAGAGCAAGAACACTGGAGAGGGGTGCAATAGGAATGTTATTCTaGGCCACAGGCTTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: HLTATHPGLRARTLERGAIGMLF*ATGLGR
Trigger: TCGACCCAAGCCTGTGGCCCAGAATAACATTCCTAT...TGCACCCCTCTCCAGTGTTCTTGCTCTTAGCCCAGGGTGAGTTGCAGTCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAGGGTGGATGGAATTCTaGGATGTGGGGAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: SGATWHKHLLSLWNQRTKGWMEF*DVGRVV
Trigger: CACAACCCTCCCCACATCCCAGAATTCCATCCACCC...TTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AACAAACCAGAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGAGGGTGGATGGAATTCTaGGATGTGGGGAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: NKPEQCLTDDTGRTQTHRGWMEF*DVGRVV
Trigger: CACAACCCTCCCCACATCCCAGAATTCCATCCACCC...TCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTCTGGTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAATTTTGGTGCAGCAGGTaGGGTAACGGTACGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SGATWHKHLLSLWNQRTKFWCSR*GNGTAL
Trigger: GAGAGCCGTACCGTTACCCCACCTGCTGCACCAAAA...TTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp TCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCCTCGAGGGCTCTTGGATTTCTTCTAGATaGTCATGTGTTACCAACCCT +
Preference number: 4 (lower is better)
Translates to: SSSVSSPPGLWHVRLEGSWISSR*SCVTNP
Trigger: AGGGTTGGTAACACATGACCATCTAGAAGAAATCCA...AGAGCCCTCGAGGCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp GGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGACTGTGGAGGTGGGGCTaGGCAAAGACACAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: GATWHKHLLSLWNQRTKRLWRWG*AKTQAE
Trigger: TTCAGCCTGTGTCTTTGCCCAGCCCCACCTCCACAG...TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp GTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATAGGATATCACCGTCTGTaGAGGTGGGGCTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VAVEAAAGTHWCIIERVIGYHRL*RWGWAK
Trigger: CTTTGCCCAGCCCCACCTCCACAGACGGTGATATCC...TATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp GCTGGGTACACATGTACCTTACCACTGCCTGATGGGCATGAGACAAGAAGCAGCTCTGGTCCTGACATCTaGGACAGATCCACATGCCCT +
Preference number: 4 (lower is better)
Translates to: AGYTCTLPLPDGHETRSSSGPDI*DRSTCP
Trigger: AGGGCATGTGGATCTGTCCCAGATGTCAGGACCAGA...GCTGCTTCTTGTCTCATGCCCATCAGGCAGTGGTAAGGTACATGTGTACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAATGCAGTCTGGGCCATTaGAGAGGGCCCCCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKCSLGH*RGPPPW
Trigger: CCACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCA...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTAGGGGGAGTGCAGTCTaGGCCATTGGAGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: YIMSLGMVLAKNLQLALFRGSAV*AIGEGP
Trigger: GGGGCCCTCTCCAATGGCCCAGACTGCACTCCCCCT...AAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATACGTCTGGAGGTTGACTaGTGTGTTCTGCACATCAGT +
Preference number: 4 (lower is better)
Translates to: NEPTVAVEAAAGTHWCIIRLEVD*CVLHIS
Trigger: ACTGATGTGCAGAACACACCAGTCAACCTCCAGACG...TATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR CAA 72 bp GTGTGGATGGGCCTGGCTCACTCTCACAAGCACCTCTaGTCTGCTGTAGTTTCAGTCAGGATCCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: VWMGLAHSHKHL*SAVVSVRIQLI
Trigger: AATGAGCTGGATCCTGACTGAAACTACAGCAGACAAGAGGTGCTTGTGAGAGTGAGCCAGGCCCATCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp ATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCTTTGTTTTCAGACTGTaGCAATGGCTGTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: IRLCSSSVSSPPGLWHVRFVFRL*QWLYLE
Trigger: TTCCAGATACAGCCATTGTCACAGTCTGAAAACAAA...GCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp TTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGGGCCTCTGGATAAGCTaGGGAGCTGCAAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: LCHLAWCWQRTSSWHYFMGLWIS*GAASMG
Trigger: TCCCATGCTTGCAGCTCCTCAGCTTATCCAGAGGCC...CATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp GTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATACTAAGCTGTACAGTCTaGGGTCCAGGGAGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: VAVEAAAGTHWCIIERVILSCTV*GPGSLV
Trigger: GACCAGACTCCCTGGACCTCAGACTGTACAGCTTAG...TATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp TACTCTATCATGCAAGGTCTCCGCTACCCTCAACAGGACCGTCAGCCTGAAAAACTAAGCTGTACAGTCTaGGGTCCAGGGAGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: YSIMQGLRYPQQDRQPEKLSCTV*GPGSLV
Trigger: GACCAGACTCCCTGGACCTCAGACTGTACAGCTTAG...TTTTTCAGGCTGACGGTCCTGTTGAGGGTAGCGGAGACCTTGCATGATAGAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGGTTCTTGCGCAGCTaGTCAACTACTCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: THRGCGGCCRHTLVYNRERFLRS*STTLFC
Trigger: ACAGAAAAGAGTAGTTGAGCAGCTGCGCAAGAACCT...CTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCTGCTGCGGTTGCTGCTaGTGCAGTGGCTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: TGKPTHSLDLSFYLNKRLCCGCC*CSGCSG
Trigger: GCCACTACAGCCACTGCAGCAGCAGCAACCGCAGCA...GAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACACAGAATAACAAGAATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATTGCTGCGGTTGCTGCTaGTGCAGTGGCTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: TQNNKNQLANSGATWHKHCCGCC*CSGCSG
Trigger: GCCACTACAGCCACTGCAGCAGCAGCAACCGCAGCA...ATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCTGCTGCGGTTGCTGCTaGTGCAGTGGCTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALCCGCC*CSGCSG
Trigger: GCCACTACAGCCACTGCAGCAGCAGCAACCGCAGCA...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TCGGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTTGCGGTTGCTGCGGTTaGTGCTGCTGCAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SAPPGTLNTAYVIYFPTLCGCCG*CCCSGC
Trigger: ACAGCCACTGCAGCAGCAGCAACCGCAGCAACCGCA...AAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTTGCGGTTGCTGCGGTTaGTGCTGCTGCAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPACGCCG*CCCSGC
Trigger: ACAGCCACTGCAGCAGCAGCAACCGCAGCAACCGCA...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGCGTTTTGGCTATGGTTaGAGTCTGTCCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: THRGCGGCCRHTLVYNRERFGYG*SLSIDN
Trigger: GTTGTCAATGGACAGACTGCAACCATAGCCAAAACG...CTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCCTCCCTCCGCCCGTCCGTTTTGGCTATGGTTaGAGTCTGTCCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: KQTAPSKDLKPALLPPPVRFGYG*SLSIDN
Trigger: GTTGTCAATGGACAGACTGCAACCATAGCCAAAACG...GACGGGCGGAGGGAGGAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AGTGTCCAGAGAAGGACCAACTGGTCCGTCCTACTCCTGCCCCTGGGAGGAATGTGCTTGTTTTTCCTCTaGTTCTGGGTGGGATTTAAC +
Preference number: 4 (lower is better)
Translates to: SVQRRTNWSVLLLPLGGMCLFFL*FWVGFN
Trigger: GTTAAATCCCACCCAGAAGCAGAGGAAAAACAAGCA...CATTCCTCCCAGGGGCAGGAGTAGGACGGACCAGTTGGTCCTTCTCTGGACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAACGGTACGGCTCTCTaGTTGTTTTTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KRTHRGCGGCCRHTLVYNNGTAL*LFFLCF
Trigger: GAAGCAGAGGAAAAACAAGCAGAGAGCCGTACCGTT...ATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR GCA 90 bp CAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCGTTAAGGTAAGTGACTaGACTCTTCTTACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QKKSGFALLASPRHQDCGVKVSD*TLLTLW
Trigger: CCAGAGCGTAAGAAGAGTGCAGTCACTTACCTTAAC...GCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AAACAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGGTTAAGGTAAGTGACTaGACTCTTCTTACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: KQKRTHRGCGGCCRHTLVVKVSD*TLLTLW
Trigger: CCAGAGCGTAAGAAGAGTGCAGTCACTTACCTTAAC...CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCACTGGCCACTTTTTCTaGAAACACTGCAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: IRLCSSSVSSPPGLWHVRTGHFF*KHCKNP
Trigger: AGGATTTTTGCAGTGTTTGCAGAAAAAGTGGCCAGT...GCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCCTCCCTCCGCCCGTCTGGGACAGATCCACATaGCCTTGGGAATTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: KQTAPSKDLKPALLPPPVWDRST*PWELFS
Trigger: TGAAAACAATTCCCAAGGGCATGTGGATCTGTCCCA...GACGGGCGGAGGGAGGAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGTGGGACAGATCCACATaGCCTTGGGAATTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: THRGCGGCCRHTLVYNREWDRST*PWELFS
Trigger: TGAAAACAATTCCCAAGGGCATGTGGATCTGTCCCA...CTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTGGTCTGCTCAGCCCACCCACCTTTCTCCTCTTCTTTTaGTGCTTTGTAGGCGATGTA +
Preference number: 4 (lower is better)
Translates to: WLYAWWSLLTSGLLSPPTFLLFF*CFVGDV
Trigger: TACATCGCCTACAAAGCAGCAAAAGAAGAGGAGAAA...GGTGGGTGGGCTGAGCAGACCAGAAGTCAGCAAGCTCCACCACGCATACAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCTTTCTCCTCTTCTTTTaGTGCTTTGTAGGCGATGTA +
Preference number: 4 (lower is better)
Translates to: IRLCSSSVSSPPGLWHVRFLLFF*CFVGDV
Trigger: TACATCGCCTACAAAGCAGCAAAAGAAGAGGAGAAA...GCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCTTAGAACCGCCGCGCCAGGATGCTaGTCTTCATCTCCATACATT +
Preference number: 4 (lower is better)
Translates to: KRVVSIHTHLGRAALLRTAAPGC*SSSPYI
Trigger: AATGTATGGAGATGAAGAGCAGCATCCTGGCGCGGC...GGTTCTAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCGCCGCGCCAGGATGCTaGTCTTCATCTCCATACATT +
Preference number: 4 (lower is better)
Translates to: GMVLAKNLQLALFHVTWSAAPGC*SSSPYI
Trigger: AATGTATGGAGATGAAGAGCAGCATCCTGGCGCGGC...GGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAGCCGCGCCAGGATGCTaGTCTTCATCTCCATACATT +
Preference number: 4 (lower is better)
Translates to: SGATWHKHLLSLWNQRTKAAPGC*SSSPYI
Trigger: AATGTATGGAGATGAAGAGCAGCATCCTGGCGCGGC...TTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGATCTGCCGCGCCAGGATaGTGCTCTTCATCTCCATAC +
Preference number: 4 (lower is better)
Translates to: GATWHKHLLSLWNQRTKRSAAPG*CSSSPY
Trigger: GTATGGAGATGAAGAGCAGCATCCTGGCGCGGCAGA...TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATTTGACTGGTGTGTTCTaGACATCAGTGCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: KRTHRGCGGCCRHTLVYNLTGVF*TSVLST
Trigger: TGTGCTCAGCACTGATGTGCAGAACACACCAGTCAA...ATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TACTCTATCATGCAAGGTCTCCGCTACCCTCAACAGGACCGTCAGCCTGAAAAAAATTTGGACAGCCTCTaGCCCAGGCCCAGTGACCTT +
Preference number: 4 (lower is better)
Translates to: YSIMQGLRYPQQDRQPEKNLDSL*PRPSDL
Trigger: AAGGTCACTGGGCCTGGGGCAGAGGCTGTCCAAATT...TTTTTCAGGCTGACGGTCCTGTTGAGGGTAGCGGAGACCTTGCATGATAGAGTA
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCGGGCTGAGGAGGTGTTaGTTGAACCTGCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: WHGAGKEPPAGTISCNMVGLRRC*LNLQSD
Trigger: GTCACTCTGCAGGTTCAAGCAACACCTCCTCAGCCC...GACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAGGGCTGAGGAGGTGTTaGTTGAACCTGCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: GATWHKHLLSLWNQRTKRGLRRC*LNLQSD
Trigger: GTCACTCTGCAGGTTCAAGCAACACCTCCTCAGCCC...TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCGACAATGGCTGTATCTaGAACTTGTCCGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: NWQTRVPPGTSIFSLSGTDNGCI*NLSGCS
Trigger: AGAGCAGCCGGACAAGTTCCAGATACAGCCATTGTC...GGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAAGGAGGGATAAACTGTaGTACTTTGATGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NEPTVAVEAAAGTHWCIIRRDKL*YFDGLR
Trigger: CCTCAGCCCATCAAAGTACCACAGTTTATCCCTCCT...TATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAAGGAAGTTTGGGCGTaGAGTGAGTCTAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: NQLANSGATWHKHLLSLWKEVWA*SESRRR
Trigger: CCTCCTCCTAGACTCACTCCACGCCCAAACTTCCTT...CCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAAGGAAGTTTGGGCGTaGAGTGAGTCTAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SGATWHKHLLSLWNQRTKKEVWA*SESRRR
Trigger: CCTCCTCCTAGACTCACTCCACGCCCAAACTTCCTT...TTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CAAGGTCTGAGACCGTGGGAACGCCCTGACACTATGCACATTCCATTTTGGCTTAAGGAAGTTTGGGCGTaGAGTGAGTCTAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QGLRPWERPDTMHIPFWLKEVWA*SESRRR
Trigger: CCTCCTCCTAGACTCACTCCACGCCCAAACTTCCTT...AAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCACGGTCTCAGACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCTTAGAACCCTGTGGAAGGAAGTTTaGGCGTGGAGTGAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: KRVVSIHTHLGRAALLRTLWKEV*AWSESR
Trigger: CCTAGACTCACTCCACGCCCAAACTTCCTTCCACAG...GGTTCTAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTCTGGGCCACAGGCTTaGGTCGAACCTGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LCHLAWCWQRTSSWHYFMSGPQA*VEPVEG
Trigger: TCCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGA...CATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAATAGGAATGTTATTCTaGGCCACAGGCTTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: NEPTVAVEAAAGTHWCIIIGMLF*ATGLGR
Trigger: TCGACCCAAGCCTGTGGCCCAGAATAACATTCCTAT...TATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAACATGGGAGGAGGCGCTaGAGCGATAGGAATGTTATT +
Preference number: 4 (lower is better)
Translates to: WQTRVPPGTSIFSLSGTKHGRRR*SDRNVI
Trigger: AATAACATTCCTATCGCTCCAGCGCCTCCTCCCATG...TTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTGAGGAGCTGCAAGCATaGGAGGAGGCGCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: YIMSLGMVLAKNLQLALFEELQA*EEALER
Trigger: TCGCTCCAGCGCCTCCTCCCATGCTTGCAGCTCCTC...AAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCGGGTGGATGGAATTCTaGGATGTGGGGAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: WHGAGKEPPAGTISCNMVGWMEF*DVGRVV
Trigger: CACAACCCTCCCCACATCCCAGAATTCCATCCACCC...GACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACTCTGTACTTTCCAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCAGGGTGGATGGAATTCTaGGATGTGGGGAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: TLYFPEEIRLCSSSVSSPGWMEF*DVGRVV
Trigger: CACAACCCTCCCCACATCCCAGAATTCCATCCACCC...TGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTGGAAAGTACAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TACTCTATCATGCAAGGTCTCCGCTACCCTCAACAGGACCGTCAGCCTGAAAAACACGGACAGGGTGGATaGAATTCTGGGATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: YSIMQGLRYPQQDRQPEKHGQGG*NSGMWG
Trigger: TCCCCACATCCCAGAATTCCATCCACCCTGTCCGTG...TTTTTCAGGCTGACGGTCCTGTTGAGGGTAGCGGAGACCTTGCATGATAGAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp GAAGAAGAGAAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGACAATGCTGGTGAGCTaGGCCATGGGGAACGTTTTG +
Preference number: 4 (lower is better)
Translates to: EEEKRVVSIHTHLGRAALTMLVS*AMGNVL
Trigger: CAAAACGTTCCCCATGGCCCAGCTCACCAGCATTGT...CAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTTCTCTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp GGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCACAATGCTGGTGAGCTaGGCCATGGGGAACGTTTTG +
Preference number: 4 (lower is better)
Translates to: GMVLAKNLQLALFHVTWSTMLVS*AMGNVL
Trigger: CAAAACGTTCCCCATGGCCCAGCTCACCAGCATTGT...GGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACAATGCTGGTGAGCTaGGCCATGGGGAACGTTTTG +
Preference number: 4 (lower is better)
Translates to: INWQTRVPPGTSIFSLSGTMLVS*AMGNVL
Trigger: CAAAACGTTCCCCATGGCCCAGCTCACCAGCATTGT...TCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACTCTGTACTTTCCAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCATTTTGGTGCAGCAGGTaGGGTAACGGTACGGCTCTC +
Preference number: 4 (lower is better)
Translates to: TLYFPEEIRLCSSSVSSPFWCSR*GNGTAL
Trigger: GAGAGCCGTACCGTTACCCCACCTGCTGCACCAAAA...TGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTGGAAAGTACAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp CATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTTTTGGTGCAGCAGGTaGGGTAACGGTACGGCTCTC +
Preference number: 4 (lower is better)
Translates to: HGAGKEPPAGTISCNMVQFWCSR*GNGTAL
Trigger: GAGAGCCGTACCGTTACCCCACCTGCTGCACCAAAA...CTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCACCGTCTGTGGAGGTaGGGCTGGGCAAAGACACAG +
Preference number: 4 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPAHRLWR*GWAKTQ
Trigger: CTGTGTCTTTGCCCAGCCCCACCTCCACAGACGGTG...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp AAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCCTCCCTCCGCCCGTCCTGCAAAAATCCTCATaGATATCACCGTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: KQTAPSKDLKPALLPPPVLQKSS*ISPSVE
Trigger: CTCCACAGACGGTGATATCCATGAGGATTTTTGCAG...GACGGGCGGAGGGAGGAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp TGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAAGATCCACATGCCCTTaGGAATTGTTTTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: WQTRVPPGTSIFSLSGTKRSTCP*ELFSGA
Trigger: CGCCCCTGAAAACAATTCCCAAGGGCATGTGGATCT...TTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGGCCACACAAGGCAAGCATAGTGATTCTAGCCCAGGAACACCCAGGAAGCATGAGATCCACATGCCCTTaGGAATTGTTTTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: RPHKASIVILAQEHPGSMRSTCP*ELFSGA
Trigger: CGCCCCTGAAAACAATTCCCAAGGGCATGTGGATCT...CATGCTTCCTGGGTGTTCCTGGGCTAGAATCACTATGCTTGCCTTGTGTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CACCTGACTGCAACTCACCCTGGGCTAAGAGCAAGAACACTGGAGAGGGGTGCATGTAGGAATGAACAATaGCTAAGGTTCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: HLTATHPGLRARTLERGACRNEQ*LRFQAK
Trigger: CTTGGCCTGGAACCTTAGCCATTGTTCATTCCTACA...TGCACCCCTCTCCAGTGTTCTTGCTCTTAGCCCAGGGTGAGTTGCAGTCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AAACAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTGTAGGAATGAACAATaGCTAAGGTTCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KQKRTHRGCGGCCRHTLVCRNEQ*LRFQAK
Trigger: CTTGGCCTGGAACCTTAGCCATTGTTCATTCCTACA...CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCGCAATGGTAGGTCTCTaGCCCACAACAGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPAMVGL*PTTEAG
Trigger: GCCTGCCTCTGTTGTGGGCCAGAGACCTACCATTGC...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp GTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAAGCAATGGTAGGTCTCTaGCCCACAACAGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VPPGTSIFSLSGTKEPKEAMVGL*PTTEAG
Trigger: GCCTGCCTCTGTTGTGGGCCAGAGACCTACCATTGC...TTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTGAGCACAGCCTTCTaGCTGTTGATGGCGGTCACC +
Preference number: 4 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSLSTAF*LLMAVT
Trigger: GGTGACCGCCATCAACAGCCAGAAGGCTGTGCTCAG...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCCTGAGCACAGCCTTCTaGCTGTTGATGGCGGTCACC +
Preference number: 4 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPLSTAF*LLMAVT
Trigger: GGTGACCGCCATCAACAGCCAGAAGGCTGTGCTCAG...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp ACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGTCTCACTCAAAGCTGTaGTTTTGGCTTGGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: THRGCGGCCRHTLVYNRESHSKL*FWLGVH
Trigger: ATGAACTCCAAGCCAAAATCACAGCTTTGAGTGAGA...CTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp CAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATTCTCACTCAAAGCTGTaGTTTTGGCTTGGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: QKRTHRGCGGCCRHTLVYSHSKL*FWLGVH
Trigger: ATGAACTCCAAGCCAAAATCACAGCTTTGAGTGAGA...ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp CCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGATCTCACTCAAAGCTGTaGTTTTGGCTTGGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: PTVAVEAAAGTHWCIIERSHSKL*FWLGVH
Trigger: ATGAACTCCAAGCCAAAATCACAGCTTTGAGTGAGA...TCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp ATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCCTAGAGACACCATaGAGGCAAGTTTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: INWQTRVPPGTSIFSLSGTLETP*RQVSEG
Trigger: ACCCTCAGAAACTTGCCTTCATGGTGTCTCTAGGGT...TCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR TCA 90 bp AAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCTTAGAACCACCCTAGAGACACCATaGAGGCAAGTTTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: KRVVSIHTHLGRAALLRTTLETP*RQVSEG
Trigger: ACCCTCAGAAACTTGCCTTCATGGTGTCTCTAGGGT...GGTTCTAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR TCA 90 bp GGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCACCCTAGAGACACCATaGAGGCAAGTTTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: GMVLAKNLQLALFHVTWSTLETP*RQVSEG
Trigger: ACCCTCAGAAACTTGCCTTCATGGTGTCTCTAGGGT...GGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR TCA 90 bp GAAGAAGAGAAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGACCCTAGAGACACCATaGAGGCAAGTTTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: EEEKRVVSIHTHLGRAALTLETP*RQVSEG
Trigger: ACCCTCAGAAACTTGCCTTCATGGTGTCTCTAGGGT...CAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTTCTCTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR TCA 90 bp TTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGGGCAAAGACACAGGCTaGACAGGTGCAGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LCHLAWCWQRTSSWHYFMGKDTG*TGAGKV
Trigger: CACTTTCCCTGCACCTGTTCAGCCTGTGTCTTTGCC...CATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR TCA 90 bp GGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCGGCAAAGACACAGGCTaGACAGGTGCAGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: GPSRNVKYCLCHILSHPCGKDTG*TGAGKV
Trigger: CACTTTCCCTGCACCTGTTCAGCCTGTGTCTTTGCC...GCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
CDS-3UTR TCA 90 bp ATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGATCTAAGCAGTCCAGATaGTACACACGGGAACACGTG +
Preference number: 4 (lower is better)
Translates to: INWQTRVPPGTSIFSLSGSKQSR*YTREHV
Trigger: CACGTGTTCCCGTGTGTATCATCTGGACTGCTTAGA...TCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGTCTAAGCAGTCCAGATaGTACACACGGGAACACGTG +
Preference number: 4 (lower is better)
Translates to: NQLANSGATWHKHLLSLWSKQSR*YTREHV
Trigger: CACGTGTTCCCGTGTGTATCATCTGGACTGCTTAGA...CCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GCTGGGTACACATGTACCTTACCACTGCCTGATGGGCATGAGACAAGAAGCAGCGCATTCTGTGGATCCTaGTTCATTTGGGCAACCAGT +
Preference number: 4 (lower is better)
Translates to: AGYTCTLPLPDGHETRSSAFCGS*FIWATS
Trigger: ACTGGTTGCCCAAATGAAGCAGGATCCACAGAATGC...GCTGCTTCTTGTCTCATGCCCATCAGGCAGTGGTAAGGTACATGTGTACCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAAGGTTCTTGCGCAGCTaGTCAACTACTCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: NEPTVAVEAAAGTHWCIIRFLRS*STTLFC
Trigger: ACAGAAAAGAGTAGTTGAGCAGCTGCGCAAGAACCT...TATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGGTTCTTGCGCAGCTaGTCAACTACTCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: KRTHRGCGGCCRHTLVYNRFLRS*STTLFC
Trigger: ACAGAAAAGAGTAGTTGAGCAGCTGCGCAAGAACCT...ATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GCTGGGTACACATGTACCTTACCACTGCCTGATGGGCATGAGACAAGAAGCAGCTGGAACTTGTCCGGCTaGTCTTGTTTGACTATCAGG +
Preference number: 4 (lower is better)
Translates to: AGYTCTLPLPDGHETRSSWNLSG*SCLTIR
Trigger: CCTGATAGTCAAACAAGAGCAGCCGGACAAGTTCCA...GCTGCTTCTTGTCTCATGCCCATCAGGCAGTGGTAAGGTACATGTGTACCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTGCTGCGGTTGCTGCTaGTGCAGTGGCTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: IYYVTWHGAGKEPPAGTICCGCC*CSGCSG
Trigger: GCCACTACAGCCACTGCAGCAGCAGCAACCGCAGCA...AATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAACTCTGTATGCGGTTGCTGCGGTTaGTGCTGCTGCAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LAQASSLSLEPKNQKNSVCGCCG*CCCSGC
Trigger: ACAGCCACTGCAGCAGCAGCAACCGCAGCAACCGCA...TACAGAGTTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCGATAAGCTGAGGAGCTaGAAGCATGGGAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: TGKPTHSLDLSFYLNKRLDKLRS*KHGRRR
Trigger: GCGCCTCCTCCCATGCTTGCAGCTCCTCAGCTTATC...GAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCACAGGTCTAAAGGGACACGTTTTGGCTATGGTTaGAGTCTGTCCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: QCVCMSQVVPGTHRSKGTRFGYG*SLSIDN
Trigger: GTTGTCAATGGACAGACTGCAACCATAGCCAAAACG...TGTCCCTTTAGACCTGTGCGTACCTGGGACCACCTGGGACATACACACACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGACTGTACACCGGGTTTaGTGTTGTTCTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: THRGCGGCCRHTLVYNRETVHRV*CCSSLS
Trigger: AGAAAGAGAAGAACAACAGCAAACCCGGTGTACAGT...CTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGTTAAGGTAAGTGACTaGACTCTTCTTACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: NEPTVAVEAAAGTHWCIIVKVSD*TLLTLW
Trigger: CCAGAGCGTAAGAAGAGTGCAGTCACTTACCTTAAC...TATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATTGGGACAGATCCACATaGCCTTGGGAATTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: KRTHRGCGGCCRHTLVYNWDRST*PWELFS
Trigger: TGAAAACAATTCCCAAGGGCATGTGGATCTGTCCCA...ATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCACAGGTCTAAAGGGACATGGGACAGATCCACATaGCCTTGGGAATTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: QCVCMSQVVPGTHRSKGTWDRST*PWELFS
Trigger: TGAAAACAATTCCCAAGGGCATGTGGATCTGTCCCA...TGTCCCTTTAGACCTGTGCGTACCTGGGACCACCTGGGACATACACACACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAAGCTCTTTGACCTTCTaGTCCAGTTGTTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GATWHKHLLSLWNQRTKRSSLTF*SSCSRS
Trigger: GGAGCGGGAACAACTGGAGCAGAAGGTCAAAGAGCT...TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCGCCGCGCCAGGATGCTaGTCTTCATCTCCATACATT +
Preference number: 4 (lower is better)
Translates to: WHGAGKEPPAGTISCNMVAAPGC*SSSPYI
Trigger: AATGTATGGAGATGAAGAGCAGCATCCTGGCGCGGC...GACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAATCTGCCGCGCCAGGATaGTGCTCTTCATCTCCATAC +
Preference number: 4 (lower is better)
Translates to: VPPGTSIFSLSGTKEPKESAAPG*CSSSPY
Trigger: GTATGGAGATGAAGAGCAGCATCCTGGCGCGGCAGA...TTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCCTCTGCCGCGCCAGGATaGTGCTCTTCATCTCCATAC +
Preference number: 4 (lower is better)
Translates to: APPGTLNTAYVIYFPTLASAAPG*CSSSPY
Trigger: GTATGGAGATGAAGAGCAGCATCCTGGCGCGGCAGA...GGCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTATTCGCTGTGCAGCTCTaGGAGGAGGGGGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: KSLGTGKPTHSLDLSFYLFAVQL*EEGEGA
Trigger: CGCCCCTTCCCCCTCCTCGCAGAGCTGCACAGCGAA...TAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTGGTTACAGTTCGCTGTaGAGCTCTGCGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: YIMSLGMVLAKNLQLALFGYSSL*SSARRG
Trigger: CCCCCTCCTCGCAGAGCTGCACAGCGAACTGTAACC...AAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAATTGACTGGTGTGTTCTaGACATCAGTGCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: WQTRVPPGTSIFSLSGTKLTGVF*TSVLST
Trigger: TGTGCTCAGCACTGATGTGCAGAACACACCAGTCAA...TTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAGGAGGGATAAACTGTaGTACTTTGATGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NWQTRVPPGTSIFSLSGTRRDKL*YFDGLR
Trigger: CCTCAGCCCATCAAAGTACCACAGTTTATCCCTCCT...GGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACTCTGTACTTTCCAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCAAAGGAAGTTTGGGCGTaGAGTGAGTCTAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TLYFPEEIRLCSSSVSSPKEVWA*SESRRR
Trigger: CCTCCTCCTAGACTCACTCCACGCCCAAACTTCCTT...TGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTGGAAAGTACAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCAAGGAAGTTTGGGCGTaGAGTGAGTCTAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: WHGAGKEPPAGTISCNMVKEVWA*SESRRR
Trigger: CCTCCTCCTAGACTCACTCCACGCCCAAACTTCCTT...GACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAAGAGGAGCTGCAAGCATaGGAGGAGGCGCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKEELQA*EEALER
Trigger: TCGCTCCAGCGCCTCCTCCCATGCTTGCAGCTCCTC...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTGGGTGGATGGAATTCTaGGATGTGGGGAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSGWMEF*DVGRVV
Trigger: CACAACCCTCCCCACATCCCAGAATTCCATCCACCC...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCACGGACAGGGTGGATaGAATTCTGGGATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSHGQGG*NSGMWG
Trigger: TCCCCACATCCCAGAATTCCATCCACCCTGTCCGTG...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp GAAGAAGAGAAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGAGGGAGTCTGGTCCCTaGAGTAGCTATGACAATGCT +
Preference number: 4 (lower is better)
Translates to: EEEKRVVSIHTHLGRAALRESGP*SSYDNA
Trigger: AGCATTGTCATAGCTACTCCAGGGACCAGACTCCCT...CAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTTCTCTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGGGAGTCTGGTCCCTaGAGTAGCTATGACAATGCT +
Preference number: 4 (lower is better)
Translates to: SGATWHKHLLSLWNQRTKRESGP*SSYDNA
Trigger: AGCATTGTCATAGCTACTCCAGGGACCAGACTCCCT...TTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGGGAACGCCCTGACACTATGCACATTCCATTTTGGCTTCAAACAGGAGATGAGTTTTGGTGCAGCAGGTaGGGTAACGGTACGGCTCTC +
Preference number: 4 (lower is better)
Translates to: WERPDTMHIPFWLQTGDEFWCSR*GNGTAL
Trigger: GAGAGCCGTACCGTTACCCCACCTGCTGCACCAAAA...CTCATCTCCTGTTTGAAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
CDS-3UTR CCA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTTTTTGGTGCAGCAGGTaGGGTAACGGTACGGCTCTC +
Preference number: 4 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSFWCSR*GNGTAL
Trigger: GAGAGCCGTACCGTTACCCCACCTGCTGCACCAAAA...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp ACACAGAATAACAAGAATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTGTGGAGGTGGGGCTaGGCAAAGACACAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: TQNNKNQLANSGATWHKHLWRWG*AKTQAE
Trigger: TTCAGCCTGTGTCTTTGCCCAGCCCCACCTCCACAG...ATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp CATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTGGTCCTGACATCTaGGACAGATCCACATGCCCT +
Preference number: 4 (lower is better)
Translates to: HGAGKEPPAGTISCNMVQSGPDI*DRSTCP
Trigger: AGGGCATGTGGATCTGTCCCAGATGTCAGGACCAGA...CTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGACGTCTGGAGGTTGACTaGTGTGTTCTGCACATCAGT +
Preference number: 4 (lower is better)
Translates to: INWQTRVPPGTSIFSLSGRLEVD*CVLHIS
Trigger: ACTGATGTGCAGAACACACCAGTCAACCTCCAGACG...TCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATATCCTCTGCTTCTGGGTaGGATTTAACTGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NEPTVAVEAAAGTHWCIISSASG*DLTVSP
Trigger: TGGAGAAACAGTTAAATCCCACCCAGAAGCAGAGGA...TATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp GAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGACCTCACTTGTCTCACTCAAAGCTGTaGTTTTGGCTTGGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: EQCLTDDTGRTQTHRPHLSHSKL*FWLGVH
Trigger: ATGAACTCCAAGCCAAAATCACAGCTTTGAGTGAGA...CAAGTGAGGTCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCCTCCCTCCGCCCGTCTTTGTTTTCAGACTGTaGCAATGGCTGTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: KQTAPSKDLKPALLPPPVFVFRL*QWLYLE
Trigger: TTCCAGATACAGCCATTGTCACAGTCTGAAAACAAA...GACGGGCGGAGGGAGGAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCGGCCTCTGGATAAGCTaGGGAGCTGCAAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: RESNILCHLAWCWQRTSSGLWIS*GAASMG
Trigger: TCCCATGCTTGCAGCTCCTCAGCTTATCCAGAGGCC...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGGGCAAAGACACAGGCTaGACAGGTGCAGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQGKDTG*TGAGKV
Trigger: CACTTTCCCTGCACCTGTTCAGCCTGTGTCTTTGCC...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR TCA 90 bp GTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATTTAGCATCTGGTCCTaGCATCTGGGACAGATCCAC +
Preference number: 4 (lower is better)
Translates to: VAVEAAAGTHWCIIERVIFSIWS*HLGQIH
Trigger: GTGGATCTGTCCCAGATGTCAGGACCAGATGCTAAA...TATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGGCATTCTGTGGATCCTaGTTCATTTGGGCAACCAGT +
Preference number: 4 (lower is better)
Translates to: NQLANSGATWHKHLLSLWAFCGS*FIWATS
Trigger: ACTGGTTGCCCAAATGAAGCAGGATCCACAGAATGC...CCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAAGGTTCTTGCGCAGCTaGTCAACTACTCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: WQTRVPPGTSIFSLSGTKRFLRS*STTLFC
Trigger: ACAGAAAAGAGTAGTTGAGCAGCTGCGCAAGAACCT...TTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GAAGAAGAGAAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGTGGAACTTGTCCGGCTaGTCTTGTTTGACTATCAGG +
Preference number: 4 (lower is better)
Translates to: EEEKRVVSIHTHLGRAALWNLSG*SCLTIR
Trigger: CCTGATAGTCAAACAAGAGCAGCCGGACAAGTTCCA...CAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTTCTCTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AACAAACCAGAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGATGGAACTTGTCCGGCTaGTCTTGTTTGACTATCAGG +
Preference number: 4 (lower is better)
Translates to: NKPEQCLTDDTGRTQTHRWNLSG*SCLTIR
Trigger: CCTGATAGTCAAACAAGAGCAGCCGGACAAGTTCCA...TCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTCTGGTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TACTCTATCATGCAAGGTCTCCGCTACCCTCAACAGGACCGTCAGCCTGAAAAAGGCTGTAGTGGCTGCTaGTGTGCTGTTTGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: YSIMQGLRYPQQDRQPEKGCSGC*CAVCSL
Trigger: CAAACTACAAACAGCACAGCAGCAGCCACTACAGCC...TTTTTCAGGCTGACGGTCCTGTTGAGGGTAGCGGAGACCTTGCATGATAGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATAAGTGGCTGTAGTGGCTaGTGCTGTGCTGTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: VAVEAAAGTHWCIIERVISGCSG*CCAVCS
Trigger: ACTACAAACAGCACAGCAGCAGCCACTACAGCCACT...TATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AGTGTCCAGAGAAGGACCAACTGGTCCGTCCTACTCCTGCCCCTGGGAGGAATGTTCTTTCCTGCCTCTTaGTTTGGATTTCTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: SVQRRTNWSVLLLPLGGMFFPAS*FGFLLD
Trigger: ATCTAGAAGAAATCCAAAGCAAGAGGCAGGAAAGAA...CATTCCTCCCAGGGGCAGGAGTAGGACGGACCAGTTGGTCCTTCTCTGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGTTAAGGTAAGTGACTaGACTCTTCTTACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: WQTRVPPGTSIFSLSGTKVKVSD*TLLTLW
Trigger: CCAGAGCGTAAGAAGAGTGCAGTCACTTACCTTAAC...TTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCTTTCTCCTCTTCTTTTaGTGCTTTGTAGGCGATGTA +
Preference number: 4 (lower is better)
Translates to: QKKSGFALLASPRHQDCGFLLFF*CFVGDV
Trigger: TACATCGCCTACAAAGCAGCAAAAGAAGAGGAGAAA...GCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGTCTGCCGCGCCAGGATaGTGCTCTTCATCTCCATAC +
Preference number: 4 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQSAAPG*CSSSPY
Trigger: GTATGGAGATGAAGAGCAGCATCCTGGCGCGGCAGA...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATAACAAGTTCGCTGTGCAGCTCTaGGAGGAGGGGGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: ALFHVTWSSLCMYTQNNKFAVQL*EEGEGA
Trigger: CGCCCCTTCCCCCTCCTCGCAGAGCTGCACAGCGAA...CTTGTTATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAAGGAGGGATAAACTGTaGTACTTTGATGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: INWQTRVPPGTSIFSLSGRRDKL*YFDGLR
Trigger: CCTCAGCCCATCAAAGTACCACAGTTTATCCCTCCT...TCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCTGGGCCACAGGCTTaGGTCGAACCTGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: IYYVTWHGAGKEPPAGTISGPQA*VEPVEG
Trigger: TCCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGA...AATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGCATGGGAGGAGGCGCTaGAGCGATAGGAATGTTATT +
Preference number: 4 (lower is better)
Translates to: HGAGKEPPAGTISCNMVQHGRRR*SDRNVI
Trigger: AATAACATTCCTATCGCTCCAGCGCCTCCTCCCATG...CTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGGAGGAGCTGCAAGCATaGGAGGAGGCGCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: FMVVKSLGTGKPTHSLDLEELQA*EEALER
Trigger: TCGCTCCAGCGCCTCCTCCCATGCTTGCAGCTCCTC...CAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCCATGGGGAACGTTTTaGCTATGGTTGCAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: WHGAGKEPPAGTISCNMVPWGTF*LWLQSV
Trigger: GACAGACTGCAACCATAGCCAAAACGTTCCCCATGG...GACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp GGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAAGGGAGTCTGGTCCCTaGAGTAGCTATGACAATGCT +
Preference number: 4 (lower is better)
Translates to: GATWHKHLLSLWNQRTKRRESGP*SSYDNA
Trigger: AGCATTGTCATAGCTACTCCAGGGACCAGACTCCCT...TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp GGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCGTTCTCTTCTCGTTTTaGTTTTGGTGCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GMVLAKNLQLALFHVTWSVLFSF*FWCSRW
Trigger: CCACCTGCTGCACCAAAACCAAAACGAGAAGAGAAC...GGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp AAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATTCCTGCCTCTTGCTTTaGATTTCTTCTAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: KRTHRGCGGCCRHTLVYNSCLLL*ISSRWS
Trigger: TGACCATCTAGAAGAAATCCAAAGCAAGAGGCAGGA...ATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TACTCTATCATGCAAGGTCTCCGCTACCCTCAACAGGACCGTCAGCCTGAAAAAAGATCCACATGCCCTTaGGAATTGTTTTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: YSIMQGLRYPQQDRQPEKRSTCP*ELFSGA
Trigger: CGCCCCTGAAAACAATTCCCAAGGGCATGTGGATCT...TTTTTCAGGCTGACGGTCCTGTTGAGGGTAGCGGAGACCTTGCATGATAGAGTA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCTGTAGGAATGAACAATaGCTAAGGTTCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: NWQTRVPPGTSIFSLSGTCRNEQ*LRFQAK
Trigger: CTTGGCCTGGAACCTTAGCCATTGTTCATTCCTACA...GGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TTTGGTTTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGAGGGGGAGTGCAGTCTaGGCCATTGGAGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: FGFMVVKSLGTGKPTHSLRGSAV*AIGEGP
Trigger: GGGGCCCTCTCCAATGGCCCAGACTGCACTCCCCCT...CAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAAACCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AAACAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTGGATTTCTTCTAGATaGTCATGTGTTACCAACCTC +
Preference number: 4 (lower is better)
Translates to: KQKRTHRGCGGCCRHTLVWISSR*SCVTNL
Trigger: GAGGTTGGTAACACATGACCATCTAGAAGAAATCCA...CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAAGGCCTCTGGATAAGCTaGGGAGCTGCAAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKGLWIS*GAASMG
Trigger: TCCCATGCTTGCAGCTCCTCAGCTTATCCAGAGGCC...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCCTAAGCTGTACAGTCTaGGGTCCAGGGAGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: RESNILCHLAWCWQRTSSLSCTV*GPGSLV
Trigger: GACCAGACTCCCTGGACCTCAGACTGTACAGCTTAG...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCACCCTAGAGACACCATaGAGGCAAGTTTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPTLETP*RQVSEG
Trigger: ACCCTCAGAAACTTGCCTTCATGGTGTCTCTAGGGT...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR TCA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCGGCAAAGACACAGGCTaGACAGGTGCAGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: RESNILCHLAWCWQRTSSGKDTG*TGAGKV
Trigger: CACTTTCCCTGCACCTGTTCAGCCTGTGTCTTTGCC...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR TCA 90 bp GTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAATCTAAGCAGTCCAGATaGTACACACGGGAACACGTG +
Preference number: 4 (lower is better)
Translates to: VPPGTSIFSLSGTKEPKESKQSR*YTREHV
Trigger: CACGTGTTCCCGTGTGTATCATCTGGACTGCTTAGA...TTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp GTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAATTTAGCATCTGGTCCTaGCATCTGGGACAGATCCAC +
Preference number: 4 (lower is better)
Translates to: VPPGTSIFSLSGTKEPKEFSIWS*HLGQIH
Trigger: GTGGATCTGTCCCAGATGTCAGGACCAGATGCTAAA...TTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGATGGAACTTGTCCGGCTaGTCTTGTTTGACTATCAGG +
Preference number: 4 (lower is better)
Translates to: GATWHKHLLSLWNQRTKRWNLSG*SCLTIR
Trigger: CCTGATAGTCAAACAAGAGCAGCCGGACAAGTTCCA...TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAAGATAAGCTGAGGAGCTaGAAGCATGGGAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKDKLRS*KHGRRR
Trigger: GCGCCTCCTCCCATGCTTGCAGCTCCTCAGCTTATC...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GCTGGGTACACATGTACCTTACCACTGCCTGATGGGCATGAGACAAGAAGCAGCTGCTTGTTTTTCCTCTaGTTCTGGGTGGGATTTAAC +
Preference number: 4 (lower is better)
Translates to: AGYTCTLPLPDGHETRSSCLFFL*FWVGFN
Trigger: GTTAAATCCCACCCAGAAGCAGAGGAAAAACAAGCA...GCTGCTTCTTGTCTCATGCCCATCAGGCAGTGGTAAGGTACATGTGTACCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACTCTGTACTTTCCAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCAAACGGTACGGCTCTCTaGTTGTTTTTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TLYFPEEIRLCSSSVSSPNGTAL*LFFLCF
Trigger: GAAGCAGAGGAAAAACAAGCAGAGAGCCGTACCGTT...TGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTGGAAAGTACAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR GCA 90 bp CAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATTTCTTTCCTGCCTCTTaGTTTGGATTTCTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: QKRTHRGCGGCCRHTLVYFFPAS*FGFLLD
Trigger: ATCTAGAAGAAATCCAAAGCAAGAGGCAGGAAAGAA...ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGTTCTTTCCTGCCTCTTaGTTTGGATTTCTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: THRGCGGCCRHTLVYNREFFPAS*FGFLLD
Trigger: ATCTAGAAGAAATCCAAAGCAAGAGGCAGGAAAGAA...CTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCACTGTACACCGGGTTTaGTGTTGTTCTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: NWQTRVPPGTSIFSLSGTTVHRV*CCSSLS
Trigger: AGAAAGAGAAGAACAACAGCAAACCCGGTGTACAGT...GGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGGTTAAGGTAAGTGACTaGACTCTTCTTACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: NQLANSGATWHKHLLSLWVKVSD*TLLTLW
Trigger: CCAGAGCGTAAGAAGAGTGCAGTCACTTACCTTAAC...CCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAACTGGCCACTTTTTCTaGAAACACTGCAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: NEPTVAVEAAAGTHWCIITGHFF*KHCKNP
Trigger: AGGATTTTTGCAGTGTTTGCAGAAAAAGTGGCCAGT...TATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TCGGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTAGCTCTTTGACCTTCTaGTCCAGTTGTTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SAPPGTLNTAYVIYFPTLSSLTF*SSCSRS
Trigger: GGAGCGGGAACAACTGGAGCAGAAGGTCAAAGAGCT...AAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGGCCGCGCCAGGATGCTaGTCTTCATCTCCATACATT +
Preference number: 4 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQAAPGC*SSSPYI
Trigger: AATGTATGGAGATGAAGAGCAGCATCCTGGCGCGGC...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTTCTGCCGCGCCAGGATaGTGCTCTTCATCTCCATAC +
Preference number: 4 (lower is better)
Translates to: YIMSLGMVLAKNLQLALFSAAPG*CSSSPY
Trigger: GTATGGAGATGAAGAGCAGCATCCTGGCGCGGCAGA...AAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATAACAAGCCTTGTCCAGGGAGCTaGGCATCTCCTTCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: ALFHVTWSSLCMYTQNNKPCPGS*ASPSAA
Trigger: CGCGGCAGAAGGAGATGCGCAGCTCCCTGGACAAGG...CTTGTTATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACTCTGTACTTTCCAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCAAGGAGGGATAAACTGTaGTACTTTGATGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TLYFPEEIRLCSSSVSSPRRDKL*YFDGLR
Trigger: CCTCAGCCCATCAAAGTACCACAGTTTATCCCTCCT...TGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTGGAAAGTACAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACACAGAATAACAAGAATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATAAGGAAGTTTGGGCGTaGAGTGAGTCTAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TQNNKNQLANSGATWHKHKEVWA*SESRRR
Trigger: CCTCCTCCTAGACTCACTCCACGCCCAAACTTCCTT...ATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACACAGAATAACAAGAATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTGTGGAAGGAAGTTTaGGCGTGGAGTGAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: TQNNKNQLANSGATWHKHLWKEV*AWSESR
Trigger: CCTAGACTCACTCCACGCCCAAACTTCCTTCCACAG...ATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAATCTGGGCCACAGGCTTaGGTCGAACCTGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKSGPQA*VEPVEG
Trigger: TCCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGA...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCATAGGAATGTTATTCTaGGCCACAGGCTTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: WHGAGKEPPAGTISCNMVIGMLF*ATGLGR
Trigger: TCGACCCAAGCCTGTGGCCCAGAATAACATTCCTAT...GACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp GCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCCCATGGGAGGAGGCGCTaGAGCGATAGGAATGTTATT +
Preference number: 4 (lower is better)
Translates to: APPGTLNTAYVIYFPTLAHGRRR*SDRNVI
Trigger: AATAACATTCCTATCGCTCCAGCGCCTCCTCCCATG...GGCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCACGGACAGGGTGGATaGAATTCTGGGATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: YIMSLGMVLAKNLQLALFHGQGG*NSGMWG
Trigger: TCCCCACATCCCAGAATTCCATCCACCCTGTCCGTG...AAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCCCATGGGGAACGTTTTaGCTATGGTTGCAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPPWGTF*LWLQSV
Trigger: GACAGACTGCAACCATAGCCAAAACGTTCCCCATGG...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCACAATGCTGGTGAGCTaGGCCATGGGGAACGTTTTG +
Preference number: 4 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALTMLVS*AMGNVL
Trigger: CAAAACGTTCCCCATGGCCCAGCTCACCAGCATTGT...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGAGGGAGTCTGGTCCCTaGAGTAGCTATGACAATGCT +
Preference number: 4 (lower is better)
Translates to: LCHLAWCWQRTSSWHYFMRESGP*SSYDNA
Trigger: AGCATTGTCATAGCTACTCCAGGGACCAGACTCCCT...CATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAATCCTCTGCTTCTGGGTaGGATTTAACTGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SGATWHKHLLSLWNQRTKSSASG*DLTVCF
Trigger: GAAACAGACAGTTAAATCCCACCCAGAAGCAGAGGA...TTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp GAAGAAGAGAAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGTCCTCTGCTTCTGGGTaGGATTTAACTGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: EEEKRVVSIHTHLGRAALSSASG*DLTVCF
Trigger: GAAACAGACAGTTAAATCCCACCCAGAAGCAGAGGA...CAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTTCTCTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp AATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGTCCTCTGCTTCTGGGTaGGATTTAACTGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: NQLANSGATWHKHLLSLWSSASG*DLTVCF
Trigger: GAAACAGACAGTTAAATCCCACCCAGAAGCAGAGGA...CCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp CTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAACTCTGTATTTTGGTGCAGCAGGTaGGGTAACGGTACGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LAQASSLSLEPKNQKNSVFWCSR*GNGTAL
Trigger: GAGAGCCGTACCGTTACCCCACCTGCTGCACCAAAA...TACAGAGTTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCCACCGCATTGTATTTTaGAGGACGACCTCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPHRIVF*RTTSLP
Trigger: CGGAAGAGAGGTCGTCCTCCAAAATACAATGCGGTG...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp TTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGCACCGCATTGTATTTTaGAGGACGACCTCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: LCHLAWCWQRTSSWHYFMHRIVF*RTTSLP
Trigger: CGGAAGAGAGGTCGTCCTCCAAAATACAATGCGGTG...CATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp AATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGCTGCAAAAATCCTCATaGATATCACCGTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: NQLANSGATWHKHLLSLWLQKSS*ISPSVE
Trigger: CTCCACAGACGGTGATATCCATGAGGATTTTTGCAG...CCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCTCTGGTCCTGACATCTaGGACAGATCCACATGCCCT +
Preference number: 4 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALSGPDI*DRSTCP
Trigger: AGGGCATGTGGATCTGTCCCAGATGTCAGGACCAGA...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGTGTAGGAATGAACAATaGCTAAGGTTCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: NQLANSGATWHKHLLSLWCRNEQ*LRFQAK
Trigger: CTTGGCCTGGAACCTTAGCCATTGTTCATTCCTACA...CCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCTTAGTCTCTTCCCCCTaGTTACAGTTCGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPLVSSP*LQFAVQ
Trigger: CTGCACAGCGAACTGTAACCAGGGGGAAGAGACTAA...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACTCTGTACTTTCCAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCAATGGATATCACCCTTTaGCCAGTGTTCCTCATTGGC +
Preference number: 4 (lower is better)
Translates to: TLYFPEEIRLCSSSVSSPMDITL*PVFLIG
Trigger: GCCAATGAGGAACACTGGCCAAAGGGTGATATCCAT...TGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTGGAAAGTACAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000068702.14
ENSMUST00000111292.8
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTAGCAATGGTAGGTCTCTaGCCCACAACAGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: CGGCCRHTLVYNRESNILAMVGL*PTTEAG
Trigger: GCCTGCCTCTGTTGTGGGCCAGAGACCTACCATTGC...TAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGGGAACGCCCTGACACTATGCACATTCCATTTTGGCTTCAAACAGGAGATGAGCGTCTGGAGGTTGACTaGTGTGTTCTGCACATCAGT +
Preference number: 4 (lower is better)
Translates to: WERPDTMHIPFWLQTGDERLEVD*CVLHIS
Trigger: ACTGATGTGCAGAACACACCAGTCAACCTCCAGACG...CTCATCTCCTGTTTGAAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGACCTTACTAGACGTCTaGAGGTTGACTGGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: HGAGKEPPAGTISCNMVQTLLDV*RLTGVF
Trigger: GAACACACCAGTCAACCTCCAGACGTCTAGTAAGGT...CTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCACAGGTCTAAAGGGACATTTTTCCTCTGCTTCTaGGTGGGATTTAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: QCVCMSQVVPGTHRSKGTFFLCF*VGFNCF
Trigger: GAAACAGTTAAATCCCACCCAGAAGCAGAGGAAAAA...TGTCCCTTTAGACCTGTGCGTACCTGGGACCACCTGGGACATACACACACACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGTTTAGCATCTGGTCCTaGCATCTGGGACAGATCCAC +
Preference number: 4 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQFSIWS*HLGQIH
Trigger: GTGGATCTGTCCCAGATGTCAGGACCAGATGCTAAA...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp ACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCTTTAGCATCTGGTCCTaGCATCTGGGACAGATCCAC +
Preference number: 4 (lower is better)
Translates to: TGKPTHSLDLSFYLNKRLFSIWS*HLGQIH
Trigger: GTGGATCTGTCCCAGATGTCAGGACCAGATGCTAAA...GAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCCGCATTCTGTGGATCCTaGTTCATTTGGGCAACCAGT +
Preference number: 4 (lower is better)
Translates to: APPGTLNTAYVIYFPTLAAFCGS*FIWATS
Trigger: ACTGGTTGCCCAAATGAAGCAGGATCCACAGAATGC...GGCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATAAGGTTCTTGCGCAGCTaGTCAACTACTCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: VAVEAAAGTHWCIIERVIRFLRS*STTLFC
Trigger: ACAGAAAAGAGTAGTTGAGCAGCTGCGCAAGAACCT...TATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTTGGAACTTGTCCGGCTaGTCTTGTTTGACTATCAGG +
Preference number: 4 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSWNLSG*SCLTIR
Trigger: CCTGATAGTCAAACAAGAGCAGCCGGACAAGTTCCA...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTTGGAACTTGTCCGGCTaGTCTTGTTTGACTATCAGG +
Preference number: 4 (lower is better)
Translates to: YVTWHGAGKEPPAGTISCWNLSG*SCLTIR
Trigger: CCTGATAGTCAAACAAGAGCAGCCGGACAAGTTCCA...ACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCGGCTGTAGTGGCTGCTaGTGTGCTGTTTGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALGCSGC*CAVCSL
Trigger: CAAACTACAAACAGCACAGCAGCAGCCACTACAGCC...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACACAGAATAACAAGAATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATGGCTGTAGTGGCTGCTaGTGTGCTGTTTGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: TQNNKNQLANSGATWHKHGCSGC*CAVCSL
Trigger: CAAACTACAAACAGCACAGCAGCAGCCACTACAGCC...ATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTAGTGGCTGTAGTGGCTaGTGCTGTGCTGTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPASGCSG*CCAVCS
Trigger: ACTACAAACAGCACAGCAGCAGCCACTACAGCCACT...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACACAGAATAACAAGAATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATAGTGGCTGTAGTGGCTaGTGCTGTGCTGTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: TQNNKNQLANSGATWHKHSGCSG*CCAVCS
Trigger: ACTACAAACAGCACAGCAGCAGCCACTACAGCCACT...ATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCAGTGGCTGTAGTGGCTaGTGCTGTGCTGTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALSGCSG*CCAVCS
Trigger: ACTACAAACAGCACAGCAGCAGCCACTACAGCCACT...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATACGTTTTGGCTATGGTTaGAGTCTGTCCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: VAVEAAAGTHWCIIERVIRFGYG*SLSIDN
Trigger: GTTGTCAATGGACAGACTGCAACCATAGCCAAAACG...TATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACTCTGTACTTTCCAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACGTTTTGGCTATGGTTaGAGTCTGTCCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: TLYFPEEIRLCSSSVSSPRFGYG*SLSIDN
Trigger: GTTGTCAATGGACAGACTGCAACCATAGCCAAAACG...TGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTGGAAAGTACAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGATGCTTGTTTTTCCTCTaGTTCTGGGTGGGATTTAAC +
Preference number: 4 (lower is better)
Translates to: INWQTRVPPGTSIFSLSGCLFFL*FWVGFN
Trigger: GTTAAATCCCACCCAGAAGCAGAGGAAAAACAAGCA...TCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATATTCTTTCCTGCCTCTTaGTTTGGATTTCTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: NEPTVAVEAAAGTHWCIIFFPAS*FGFLLD
Trigger: ATCTAGAAGAAATCCAAAGCAAGAGGCAGGAAAGAA...TATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCACAGGTCTAAAGGGACATTCTTTCCTGCCTCTTaGTTTGGATTTCTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: QCVCMSQVVPGTHRSKGTFFPAS*FGFLLD
Trigger: ATCTAGAAGAAATCCAAAGCAAGAGGCAGGAAAGAA...TGTCCCTTTAGACCTGTGCGTACCTGGGACCACCTGGGACATACACACACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGACTGTACACCGGGTTTaGTGTTGTTCTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: NQLANSGATWHKHLLSLWTVHRV*CCSSLS
Trigger: AGAAAGAGAAGAACAACAGCAAACCCGGTGTACAGT...CCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GAAGAAGAGAAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGACTGTACACCGGGTTTaGTGTTGTTCTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: EEEKRVVSIHTHLGRAALTVHRV*CCSSLS
Trigger: AGAAAGAGAAGAACAACAGCAAACCCGGTGTACAGT...CAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTTCTCTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCGTTAAGGTAAGTGACTaGACTCTTCTTACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: WHGAGKEPPAGTISCNMVVKVSD*TLLTLW
Trigger: CCAGAGCGTAAGAAGAGTGCAGTCACTTACCTTAAC...GACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTGGGACAGATCCACATaGCCTTGGGAATTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: HGAGKEPPAGTISCNMVQWDRST*PWELFS
Trigger: TGAAAACAATTCCCAAGGGCATGTGGATCTGTCCCA...CTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGATGGGACAGATCCACATaGCCTTGGGAATTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: GATWHKHLLSLWNQRTKRWDRST*PWELFS
Trigger: TGAAAACAATTCCCAAGGGCATGTGGATCTGTCCCA...TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAACTCTGTAAGCTCTTTGACCTTCTaGTCCAGTTGTTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LAQASSLSLEPKNQKNSVSSLTF*SSCSRS
Trigger: GGAGCGGGAACAACTGGAGCAGAAGGTCAAAGAGCT...TACAGAGTTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCGCCGCGCCAGGATGCTaGTCTTCATCTCCATACATT +
Preference number: 4 (lower is better)
Translates to: RESNILCHLAWCWQRTSSAAPGC*SSSPYI
Trigger: AATGTATGGAGATGAAGAGCAGCATCCTGGCGCGGC...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTATCTGCCGCGCCAGGATaGTGCTCTTCATCTCCATAC +
Preference number: 4 (lower is better)
Translates to: CGGCCRHTLVYNRESNILSAAPG*CSSSPY
Trigger: GTATGGAGATGAAGAGCAGCATCCTGGCGCGGCAGA...TAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTATGTCACTTGGGTTACAGTTCGCTGTaGAGCTCTGCGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: CCRHTLVYNRESNILCHLGYSSL*SSARRG
Trigger: CCCCCTCCTCGCAGAGCTGCACAGCGAACTGTAACC...CAAGTGACATAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTGACAATGGCTGTATCTaGAACTTGTCCGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPADNGCI*NLSGCS
Trigger: AGAGCAGCCGGACAAGTTCCAGATACAGCCATTGTC...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTAGGAGGGATAAACTGTaGTACTTTGATGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSRRDKL*YFDGLR
Trigger: CCTCAGCCCATCAAAGTACCACAGTTTATCCCTCCT...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAACTCTGTACTGTGGAAGGAAGTTTaGGCGTGGAGTGAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: LAQASSLSLEPKNQKNSVLWKEV*AWSESR
Trigger: CCTAGACTCACTCCACGCCCAAACTTCCTTCCACAG...TACAGAGTTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCATGGGAGGAGGCGCTaGAGCGATAGGAATGTTATT +
Preference number: 4 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPAHGRRR*SDRNVI
Trigger: AATAACATTCCTATCGCTCCAGCGCCTCCTCCCATG...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTACACGGACAGGGTGGATaGAATTCTGGGATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: CGGCCRHTLVYNRESNILHGQGG*NSGMWG
Trigger: TCCCCACATCCCAGAATTCCATCCACCCTGTCCGTG...TAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACACAGAATAACAAGAATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCCATGGGGAACGTTTTaGCTATGGTTGCAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: TQNNKNQLANSGATWHKHPWGTF*LWLQSV
Trigger: GACAGACTGCAACCATAGCCAAAACGTTCCCCATGG...ATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTACAATGCTGGTGAGCTaGGCCATGGGGAACGTTTTG +
Preference number: 4 (lower is better)
Translates to: YIMSLGMVLAKNLQLALFTMLVS*AMGNVL
Trigger: CAAAACGTTCCCCATGGCCCAGCTCACCAGCATTGT...AAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTGTTCTCTTCTCGTTTTaGTTTTGGTGCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: YVTWHGAGKEPPAGTISCVLFSF*FWCSRW
Trigger: CCACCTGCTGCACCAAAACCAAAACGAGAAGAGAAC...ACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGCACCGCATTGTATTTTaGAGGACGACCTCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQHRIVF*RTTSLP
Trigger: CGGAAGAGAGGTCGTCCTCCAAAATACAATGCGGTG...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp TTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGCTGTGGAGGTGGGGCTaGGCAAAGACACAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: FMVVKSLGTGKPTHSLDLLWRWG*AKTQAE
Trigger: TTCAGCCTGTGTCTTTGCCCAGCCCCACCTCCACAG...CAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp TACTCTATCATGCAAGGTCTCCGCTACCCTCAACAGGACCGTCAGCCTGAAAAACTGCAAAAATCCTCATaGATATCACCGTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: YSIMQGLRYPQQDRQPEKLQKSS*ISPSVE
Trigger: CTCCACAGACGGTGATATCCATGAGGATTTTTGCAG...TTTTTCAGGCTGACGGTCCTGTTGAGGGTAGCGGAGACCTTGCATGATAGAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp TGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCTGCAAAAATCCTCATaGATATCACCGTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: WHGAGKEPPAGTISCNMVLQKSS*ISPSVE
Trigger: CTCCACAGACGGTGATATCCATGAGGATTTTTGCAG...GACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp ACTCTGTACTTTCCAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCATGTAGGAATGAACAATaGCTAAGGTTCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TLYFPEEIRLCSSSVSSPCRNEQ*LRFQAK
Trigger: CTTGGCCTGGAACCTTAGCCATTGTTCATTCCTACA...TGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTGGAAAGTACAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCTGTAGGAATGAACAATaGCTAAGGTTCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: WHGAGKEPPAGTISCNMVCRNEQ*LRFQAK
Trigger: CTTGGCCTGGAACCTTAGCCATTGTTCATTCCTACA...GACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGTTAGTCTCTTCCCCCTaGTTACAGTTCGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQLVSSP*LQFAVQ
Trigger: CTGCACAGCGAACTGTAACCAGGGGGAAGAGACTAA...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAACTCTGTACAACAGAGGCAGGCATaGTCGCAGTTGCTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LAQASSLSLEPKNQKNSVQQRQA*SQLLLS
Trigger: TGAAAGCAGCAACTGCGACCATGCCTGCCTCTGTTG...TACAGAGTTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGGCAATGGTAGGTCTCTaGCCCACAACAGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FMVVKSLGTGKPTHSLDLAMVGL*PTTEAG
Trigger: GCCTGCCTCTGTTGTGGGCCAGAGACCTACCATTGC...CAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTACTGAGCACAGCCTTCTaGCTGTTGATGGCGGTCACC +
Preference number: 4 (lower is better)
Translates to: KSLGTGKPTHSLDLSFYLLSTAF*LLMAVT
Trigger: GGTGACCGCCATCAACAGCCAGAAGGCTGTGCTCAG...TAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGGCCACACAAGGCAAGCATAGTGATTCTAGCCCAGGAACACCCAGGAAGCATGTTTTTCCTCTGCTTCTaGGTGGGATTTAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: RPHKASIVILAQEHPGSMFFLCF*VGFNCF
Trigger: GAAACAGTTAAATCCCACCCAGAAGCAGAGGAAAAA...CATGCTTCCTGGGTGTTCCTGGGCTAGAATCACTATGCTTGCCTTGTGTGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp ATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGATTGGCTTGGAGTTCATaGAGCTGTTTCTTTAAGTCA +
Preference number: 4 (lower is better)
Translates to: INWQTRVPPGTSIFSLSGLAWSS*SCFFKS
Trigger: TGACTTAAAGAAACAGCTTCATGAACTCCAAGCCAA...TCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp GGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCTTGGCTTGGAGTTCATaGAGCTGTTTCTTTAAGTCA +
Preference number: 4 (lower is better)
Translates to: GMVLAKNLQLALFHVTWSLAWSS*SCFFKS
Trigger: TGACTTAAAGAAACAGCTTCATGAACTCCAAGCCAA...GGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCTTAGAACCTTTGTTTTCAGACTGTaGCAATGGCTGTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: KRVVSIHTHLGRAALLRTFVFRL*QWLYLE
Trigger: TTCCAGATACAGCCATTGTCACAGTCTGAAAACAAA...GGTTCTAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCGTTTTGGCTATGGTTaGAGTCTGTCCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSRFGYG*SLSIDN
Trigger: GTTGTCAATGGACAGACTGCAACCATAGCCAAAACG...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTCGTTTTGGCTATGGTTaGAGTCTGTCCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: YVTWHGAGKEPPAGTISCRFGYG*SLSIDN
Trigger: GTTGTCAATGGACAGACTGCAACCATAGCCAAAACG...ACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACTCTGTACTTTCCAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCATGCTTGTTTTTCCTCTaGTTCTGGGTGGGATTTAAC +
Preference number: 4 (lower is better)
Translates to: TLYFPEEIRLCSSSVSSPCLFFL*FWVGFN
Trigger: GTTAAATCCCACCCAGAAGCAGAGGAAAAACAAGCA...TGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTGGAAAGTACAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTAACGGTACGGCTCTCTaGTTGTTTTTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPANGTAL*LFFLCF
Trigger: GAAGCAGAGGAAAAACAAGCAGAGAGCCGTACCGTT...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR GCA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCAACGGTACGGCTCTCTaGTTGTTTTTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALNGTAL*LFFLCF
Trigger: GAAGCAGAGGAAAAACAAGCAGAGAGCCGTACCGTT...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR GCA 90 bp AAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCTTAGAACCACTGGCCACTTTTTCTaGAAACACTGCAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: KRVVSIHTHLGRAALLRTTGHFF*KHCKNP
Trigger: AGGATTTTTGCAGTGTTTGCAGAAAAAGTGGCCAGT...GGTTCTAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGACTGGCCACTTTTTCTaGAAACACTGCAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: NQLANSGATWHKHLLSLWTGHFF*KHCKNP
Trigger: AGGATTTTTGCAGTGTTTGCAGAAAAAGTGGCCAGT...CCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCCTGGGACAGATCCACATaGCCTTGGGAATTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: APPGTLNTAYVIYFPTLAWDRST*PWELFS
Trigger: TGAAAACAATTCCCAAGGGCATGTGGATCTGTCCCA...GGCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCTTTCTCCTCTTCTTTTaGTGCTTTGTAGGCGATGTA +
Preference number: 4 (lower is better)
Translates to: GMVLAKNLQLALFHVTWSFLLFF*CFVGDV
Trigger: TACATCGCCTACAAAGCAGCAAAAGAAGAGGAGAAA...GGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATAGCTCTTTGACCTTCTaGTCCAGTTGTTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QLALFHVTWSSLCMYTQNSSLTF*SSCSRS
Trigger: GGAGCGGGAACAACTGGAGCAGAAGGTCAAAGAGCT...ATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGTCTGCCGCGCCAGGATaGTGCTCTTCATCTCCATAC +
Preference number: 4 (lower is better)
Translates to: FMVVKSLGTGKPTHSLDLSAAPG*CSSSPY
Trigger: GTATGGAGATGAAGAGCAGCATCCTGGCGCGGCAGA...CAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATAGGCATGGTCGCAGTTaGTGCTTTCAAGACGAGAGG +
Preference number: 4 (lower is better)
Translates to: QLALFHVTWSSLCMYTQNRHGRS*CFQDER
Trigger: CCTCTCGTCTTGAAAGCAGCAACTGCGACCATGCCT...ATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGTTGACTGGTGTGTTCTaGACATCAGTGCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQLTGVF*TSVLST
Trigger: TGTGCTCAGCACTGATGTGCAGAACACACCAGTCAA...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TCGGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTTTGACTGGTGTGTTCTaGACATCAGTGCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: SAPPGTLNTAYVIYFPTLLTGVF*TSVLST
Trigger: TGTGCTCAGCACTGATGTGCAGAACACACCAGTCAA...AAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTGACAATGGCTGTATCTaGAACTTGTCCGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: YIMSLGMVLAKNLQLALFDNGCI*NLSGCS
Trigger: AGAGCAGCCGGACAAGTTCCAGATACAGCCATTGTC...AAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACACAGAATAACAAGAATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATAGGAGGGATAAACTGTaGTACTTTGATGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TQNNKNQLANSGATWHKHRRDKL*YFDGLR
Trigger: CCTCAGCCCATCAAAGTACCACAGTTTATCCCTCCT...ATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTAAAGGAAGTTTGGGCGTaGAGTGAGTCTAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CGGCCRHTLVYNRESNILKEVWA*SESRRR
Trigger: CCTCCTCCTAGACTCACTCCACGCCCAAACTTCCTT...TAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TCGGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTATAGGAATGTTATTCTaGGCCACAGGCTTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: SAPPGTLNTAYVIYFPTLIGMLF*ATGLGR
Trigger: TCGACCCAAGCCTGTGGCCCAGAATAACATTCCTAT...AAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAACTCTGTACCATGGGGAACGTTTTaGCTATGGTTGCAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LAQASSLSLEPKNQKNSVPWGTF*LWLQSV
Trigger: GACAGACTGCAACCATAGCCAAAACGTTCCCCATGG...TACAGAGTTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTAACAATGCTGGTGAGCTaGGCCATGGGGAACGTTTTG +
Preference number: 4 (lower is better)
Translates to: CGGCCRHTLVYNRESNILTMLVS*AMGNVL
Trigger: CAAAACGTTCCCCATGGCCCAGCTCACCAGCATTGT...TAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTAGGGAGTCTGGTCCCTaGAGTAGCTATGACAATGCT +
Preference number: 4 (lower is better)
Translates to: IYYVTWHGAGKEPPAGTIRESGP*SSYDNA
Trigger: AGCATTGTCATAGCTACTCCAGGGACCAGACTCCCT...AATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTGTTCTCTTCTCGTTTTaGTTTTGGTGCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPAVLFSF*FWCSRW
Trigger: CCACCTGCTGCACCAAAACCAAAACGAGAAGAGAAC...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCGTTCTCTTCTCGTTTTaGTTTTGGTGCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALVLFSF*FWCSRW
Trigger: CCACCTGCTGCACCAAAACCAAAACGAGAAGAGAAC...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp GAAGAAGAGAAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGTGGATTTCTTCTAGATaGTCATGTGTTACCAACCCT +
Preference number: 4 (lower is better)
Translates to: EEEKRVVSIHTHLGRAALWISSR*SCVTNP
Trigger: AGGGTTGGTAACACATGACCATCTAGAAGAAATCCA...CAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTTCTCTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp CATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCCTGCCTCTTGCTTTaGATTTCTTCTAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: HGAGKEPPAGTISCNMVQSCLLL*ISSRWS
Trigger: TGACCATCTAGAAGAAATCCAAAGCAAGAGGCAGGA...CTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAACTCTGTAAGATCCACATGCCCTTaGGAATTGTTTTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: LAQASSLSLEPKNQKNSVRSTCP*ELFSGA
Trigger: CGCCCCTGAAAACAATTCCCAAGGGCATGTGGATCT...TACAGAGTTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCAGATCCACATGCCCTTaGGAATTGTTTTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: RESNILCHLAWCWQRTSSRSTCP*ELFSGA
Trigger: CGCCCCTGAAAACAATTCCCAAGGGCATGTGGATCT...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAATCTGGTCCTGACATCTaGGACAGATCCACATGCCCT +
Preference number: 4 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKSGPDI*DRSTCP
Trigger: AGGGCATGTGGATCTGTCCCAGATGTCAGGACCAGA...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTTAGTCTCTTCCCCCTaGTTACAGTTCGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: RESNILCHLAWCWQRTSSLVSSP*LQFAVQ
Trigger: CTGCACAGCGAACTGTAACCAGGGGGAAGAGACTAA...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTTTAGTCTCTTCCCCCTaGTTACAGTTCGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: YIMSLGMVLAKNLQLALFLVSSP*LQFAVQ
Trigger: CTGCACAGCGAACTGTAACCAGGGGGAAGAGACTAA...AAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTTAGTCTCTTCCCCCTaGTTACAGTTCGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: IYYVTWHGAGKEPPAGTILVSSP*LQFAVQ
Trigger: CTGCACAGCGAACTGTAACCAGGGGGAAGAGACTAA...AATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGATGGATATCACCCTTTaGCCAGTGTTCCTCATTGGC +
Preference number: 4 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQMDITL*PVFLIG
Trigger: GCCAATGAGGAACACTGGCCAAAGGGTGATATCCAT...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000068702.14
ENSMUST00000111292.8
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTCGTCTGGAGGTTGACTaGTGTGTTCTGCACATCAGT +
Preference number: 4 (lower is better)
Translates to: IYYVTWHGAGKEPPAGTIRLEVD*CVLHIS
Trigger: ACTGATGTGCAGAACACACCAGTCAACCTCCAGACG...AATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCCGTCTGGAGGTTGACTaGTGTGTTCTGCACATCAGT +
Preference number: 4 (lower is better)
Translates to: RESNILCHLAWCWQRTSSRLEVD*CVLHIS
Trigger: ACTGATGTGCAGAACACACCAGTCAACCTCCAGACG...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTTCTCACTCAAAGCTGTaGTTTTGGCTTGGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSSHSKL*FWLGVH
Trigger: ATGAACTCCAAGCCAAAATCACAGCTTTGAGTGAGA...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp CAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATTCTAAGCAGTCCAGATaGTACACACGGGAACACGTG +
Preference number: 4 (lower is better)
Translates to: QLALFHVTWSSLCMYTQNSKQSR*YTREHV
Trigger: CACGTGTTCCCGTGTGTATCATCTGGACTGCTTAGA...ATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAACTCTGTAGCATTCTGTGGATCCTaGTTCATTTGGGCAACCAGT +
Preference number: 4 (lower is better)
Translates to: LAQASSLSLEPKNQKNSVAFCGS*FIWATS
Trigger: ACTGGTTGCCCAAATGAAGCAGGATCCACAGAATGC...TACAGAGTTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCAGGTTCTTGCGCAGCTaGTCAACTACTCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: TGKPTHSLDLSFYLNKRLRFLRS*STTLFC
Trigger: ACAGAAAAGAGTAGTTGAGCAGCTGCGCAAGAACCT...GAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCAACGGTACGGCTCTCTaGTTGTTTTTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RESNILCHLAWCWQRTSSNGTAL*LFFLCF
Trigger: GAAGCAGAGGAAAAACAAGCAGAGAGCCGTACCGTT...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR GCA 90 bp ATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGATTCTTTCCTGCCTCTTaGTTTGGATTTCTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: INWQTRVPPGTSIFSLSGFFPAS*FGFLLD
Trigger: ATCTAGAAGAAATCCAAAGCAAGAGGCAGGAAAGAA...TCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AACAAACCAGAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGATTCTTTCCTGCCTCTTaGTTTGGATTTCTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: NKPEQCLTDDTGRTQTHRFFPAS*FGFLLD
Trigger: ATCTAGAAGAAATCCAAAGCAAGAGGCAGGAAAGAA...TCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTCTGGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTACTGTACACCGGGTTTaGTGTTGTTCTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSTVHRV*CCSSLS
Trigger: AGAAAGAGAAGAACAACAGCAAACCCGGTGTACAGT...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAAACTGTACACCGGGTTTaGTGTTGTTCTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: VPPGTSIFSLSGTKEPKETVHRV*CCSSLS
Trigger: AGAAAGAGAAGAACAACAGCAAACCCGGTGTACAGT...TTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCGTTAAGGTAAGTGACTaGACTCTTCTTACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TGKPTHSLDLSFYLNKRLVKVSD*TLLTLW
Trigger: CCAGAGCGTAAGAAGAGTGCAGTCACTTACCTTAAC...GAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTGTTAAGGTAAGTGACTaGACTCTTCTTACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPAVKVSD*TLLTLW
Trigger: CCAGAGCGTAAGAAGAGTGCAGTCACTTACCTTAAC...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTTTCTCCTCTTCTTTTaGTGCTTTGTAGGCGATGTA +
Preference number: 4 (lower is better)
Translates to: HGAGKEPPAGTISCNMVQFLLFF*CFVGDV
Trigger: TACATCGCCTACAAAGCAGCAAAAGAAGAGGAGAAA...CTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TTTACTTCACTCCAGTTGACTCAAAGCAACTCATTTCCAAACATCAGAAGATGGAATTTGGACAGCCTCTaGCCCAGGCCCAGTGACCTT +
Preference number: 4 (lower is better)
Translates to: FTSLQLTQSNSFPNIRRWNLDSL*PRPSDL
Trigger: AAGGTCACTGGGCCTGGGGCAGAGGCTGTCCAAATT...CCATCTTCTGATGTTTGGAAATGAGTTGCTTTGAGTCAACTGGAGTGAAGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCAGGAGGGATAAACTGTaGTACTTTGATGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RESNILCHLAWCWQRTSSRRDKL*YFDGLR
Trigger: CCTCAGCCCATCAAAGTACCACAGTTTATCCCTCCT...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAACTCTGTAATAGGAATGTTATTCTaGGCCACAGGCTTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: LAQASSLSLEPKNQKNSVIGMLF*ATGLGR
Trigger: TCGACCCAAGCCTGTGGCCCAGAATAACATTCCTAT...TACAGAGTTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATCCATGGGGAACGTTTTaGCTATGGTTGCAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: QLALFHVTWSSLCMYTQNPWGTF*LWLQSV
Trigger: GACAGACTGCAACCATAGCCAAAACGTTCCCCATGG...ATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCATGGGGAACGTTTTaGCTATGGTTGCAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKPWGTF*LWLQSV
Trigger: GACAGACTGCAACCATAGCCAAAACGTTCCCCATGG...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGTCCTCTGCTTCTGGGTaGGATTTAACTGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQSSASG*DLTVCF
Trigger: GAAACAGACAGTTAAATCCCACCCAGAAGCAGAGGA...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp TCGGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTTCCTCTGCTTCTGGGTaGGATTTAACTGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SAPPGTLNTAYVIYFPTLSSASG*DLTVCF
Trigger: GAAACAGACAGTTAAATCCCACCCAGAAGCAGAGGA...AAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp GGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGATGGATTTCTTCTAGATaGTCATGTGTTACCAACCCT +
Preference number: 4 (lower is better)
Translates to: GATWHKHLLSLWNQRTKRWISSR*SCVTNP
Trigger: AGGGTTGGTAACACATGACCATCTAGAAGAAATCCA...TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCTCCTGCCTCTTGCTTTaGATTTCTTCTAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPSCLLL*ISSRWS
Trigger: TGACCATCTAGAAGAAATCCAAAGCAAGAGGCAGGA...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACACCGCATTGTATTTTaGAGGACGACCTCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKHRIVF*RTTSLP
Trigger: CGGAAGAGAGGTCGTCCTCCAAAATACAATGCGGTG...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CCA 90 bp TTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGTCTGGTCCTGACATCTaGGACAGATCCACATGCCCT +
Preference number: 4 (lower is better)
Translates to: FMVVKSLGTGKPTHSLDLSGPDI*DRSTCP
Trigger: AGGGCATGTGGATCTGTCCCAGATGTCAGGACCAGA...CAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCACCTTACTAGACGTCTaGAGGTTGACTGGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: RESNILCHLAWCWQRTSSTLLDV*RLTGVF
Trigger: GAACACACCAGTCAACCTCCAGACGTCTAGTAAGGT...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp ACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCTCCTCTGCTTCTGGGTaGGATTTAACTGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TGKPTHSLDLSFYLNKRLSSASG*DLTVSP
Trigger: TGGAGAAACAGTTAAATCCCACCCAGAAGCAGAGGA...GAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111290.10
ENSMUST00000111297.10
3UTR CAA 72 bp AGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTaGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: SLGTGKPTHSLD*SFYLNKRLPVR
Trigger: CCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTTTGGCTTGGAGTTCATaGAGCTGTTTCTTTAAGTCA +
Preference number: 4 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSLAWSS*SCFFKS
Trigger: TGACTTAAAGAAACAGCTTCATGAACTCCAAGCCAA...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCTTTGTTTTCAGACTGTaGCAATGGCTGTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPFVFRL*QWLYLE
Trigger: TTCCAGATACAGCCATTGTCACAGTCTGAAAACAAA...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTTTTGTTTTCAGACTGTaGCAATGGCTGTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSFVFRL*QWLYLE
Trigger: TTCCAGATACAGCCATTGTCACAGTCTGAAAACAAA...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp AAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTATTTAGCATCTGGTCCTaGCATCTGGGACAGATCCAC +
Preference number: 4 (lower is better)
Translates to: KSLGTGKPTHSLDLSFYLFSIWS*HLGQIH
Trigger: GTGGATCTGTCCCAGATGTCAGGACCAGATGCTAAA...TAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTATGGAACTTGTCCGGCTaGTCTTGTTTGACTATCAGG +
Preference number: 4 (lower is better)
Translates to: CGGCCRHTLVYNRESNILWNLSG*SCLTIR
Trigger: CCTGATAGTCAAACAAGAGCAGCCGGACAAGTTCCA...TAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCGTTTTGGCTATGGTTaGAGTCTGTCCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: YIMSLGMVLAKNLQLALFRFGYG*SLSIDN
Trigger: GTTGTCAATGGACAGACTGCAACCATAGCCAAAACG...AAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCTGCTTGTTTTTCCTCTaGTTCTGGGTGGGATTTAAC +
Preference number: 4 (lower is better)
Translates to: TGKPTHSLDLSFYLNKRLCLFFL*FWVGFN
Trigger: GTTAAATCCCACCCAGAAGCAGAGGAAAAACAAGCA...GAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCTGCTTGTTTTTCCTCTaGTTCTGGGTGGGATTTAAC +
Preference number: 4 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALCLFFL*FWVGFN
Trigger: GTTAAATCCCACCCAGAAGCAGAGGAAAAACAAGCA...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTAAACGGTACGGCTCTCTaGTTGTTTTTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CGGCCRHTLVYNRESNILNGTAL*LFFLCF
Trigger: GAAGCAGAGGAAAAACAAGCAGAGAGCCGTACCGTT...TAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR GCA 90 bp GGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCACTGGCCACTTTTTCTaGAAACACTGCAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: GPSRNVKYCLCHILSHPCTGHFF*KHCKNP
Trigger: AGGATTTTTGCAGTGTTTGCAGAAAAAGTGGCCAGT...GCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGGGAACGCCCTGACACTATGCACATTCCATTTTGGCTTCAAACAGGAGATGAGACTGGCCACTTTTTCTaGAAACACTGCAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: WERPDTMHIPFWLQTGDETGHFF*KHCKNP
Trigger: AGGATTTTTGCAGTGTTTGCAGAAAAAGTGGCCAGT...CTCATCTCCTGTTTGAAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTTTTCTCCTCTTCTTTTaGTGCTTTGTAGGCGATGTA +
Preference number: 4 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSFLLFF*CFVGDV
Trigger: TACATCGCCTACAAAGCAGCAAAAGAAGAGGAGAAA...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TTTACTTCACTCCAGTTGACTCAAAGCAACTCATTTCCAAACATCAGAAGATGGGCCGCGCCAGGATGCTaGTCTTCATCTCCATACATT +
Preference number: 4 (lower is better)
Translates to: FTSLQLTQSNSFPNIRRWAAPGC*SSSPYI
Trigger: AATGTATGGAGATGAAGAGCAGCATCCTGGCGCGGC...CCATCTTCTGATGTTTGGAAATGAGTTGCTTTGAGTCAACTGGAGTGAAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGGACAATGGCTGTATCTaGAACTTGTCCGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FMVVKSLGTGKPTHSLDLDNGCI*NLSGCS
Trigger: AGAGCAGCCGGACAAGTTCCAGATACAGCCATTGTC...CAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TTTACTTCACTCCAGTTGACTCAAAGCAACTCATTTCCAAACATCAGAAGATGGCTGTGGAAGGAAGTTTaGGCGTGGAGTGAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: FTSLQLTQSNSFPNIRRWLWKEV*AWSESR
Trigger: CCTAGACTCACTCCACGCCCAAACTTCCTTCCACAG...CCATCTTCTGATGTTTGGAAATGAGTTGCTTTGAGTCAACTGGAGTGAAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTACATGGGAGGAGGCGCTaGAGCGATAGGAATGTTATT +
Preference number: 4 (lower is better)
Translates to: KSLGTGKPTHSLDLSFYLHGRRR*SDRNVI
Trigger: AATAACATTCCTATCGCTCCAGCGCCTCCTCCCATG...TAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTCCTCTGCTTCTGGGTaGGATTTAACTGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: RESNILCHLAWCWQRTSSSSASG*DLTVCF
Trigger: GAAACAGACAGTTAAATCCCACCCAGAAGCAGAGGA...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp GCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCCTGGATTTCTTCTAGATaGTCATGTGTTACCAACCCT +
Preference number: 4 (lower is better)
Translates to: APPGTLNTAYVIYFPTLAWISSR*SCVTNP
Trigger: AGGGTTGGTAACACATGACCATCTAGAAGAAATCCA...GGCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp ACACAGAATAACAAGAATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATTCCTGCCTCTTGCTTTaGATTTCTTCTAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: TQNNKNQLANSGATWHKHSCLLL*ISSRWS
Trigger: TGACCATCTAGAAGAAATCCAAAGCAAGAGGCAGGA...ATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGTCCTGCCTCTTGCTTTaGATTTCTTCTAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQSCLLL*ISSRWS
Trigger: TGACCATCTAGAAGAAATCCAAAGCAAGAGGCAGGA...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCTCCTGCCTCTTGCTTTaGATTTCTTCTAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALSCLLL*ISSRWS
Trigger: TGACCATCTAGAAGAAATCCAAAGCAAGAGGCAGGA...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAGATCCACATGCCCTTaGGAATTGTTTTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: KSLGTGKPTHSLDLSFYLRSTCP*ELFSGA
Trigger: CGCCCCTGAAAACAATTCCCAAGGGCATGTGGATCT...TAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGTTAGTCTCTTCCCCCTaGTTACAGTTCGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: FMVVKSLGTGKPTHSLDLLVSSP*LQFAVQ
Trigger: CTGCACAGCGAACTGTAACCAGGGGGAAGAGACTAA...CAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTATGTCACTTGCAACAGAGGCAGGCATaGTCGCAGTTGCTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: CCRHTLVYNRESNILCHLQQRQA*SQLLLS
Trigger: TGAAAGCAGCAACTGCGACCATGCCTGCCTCTGTTG...CAAGTGACATAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATACCTTACTAGACGTCTaGAGGTTGACTGGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: QLALFHVTWSSLCMYTQNTLLDV*RLTGVF
Trigger: GAACACACCAGTCAACCTCCAGACGTCTAGTAAGGT...ATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
3UTR CAA 72 bp AGTCTTTGCATGTACACACAGAATAACAAGAATCAATaGGCAAACTCGGGTGCCACCTGGCACAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: SLCMYTQNNKNQ*ANSGATWHKHL
Trigger: AAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGTGTACATGCAAAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCTTTGTTTTCAGACTGTaGCAATGGCTGTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALFVFRL*QWLYLE
Trigger: TTCCAGATACAGCCATTGTCACAGTCTGAAAACAAA...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp TTTGGTTTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGACCCTAGAGACACCATaGAGGCAAGTTTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: FGFMVVKSLGTGKPTHSLTLETP*RQVSEG
Trigger: ACCCTCAGAAACTTGCCTTCATGGTGTCTCTAGGGT...CAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR TCA 90 bp TTTGGTTTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGTTTAGCATCTGGTCCTaGCATCTGGGACAGATCCAC +
Preference number: 4 (lower is better)
Translates to: FGFMVVKSLGTGKPTHSLFSIWS*HLGQIH
Trigger: GTGGATCTGTCCCAGATGTCAGGACCAGATGCTAAA...CAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TTTGGTTTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGAGTGGCTGTAGTGGCTaGTGCTGTGCTGTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: FGFMVVKSLGTGKPTHSLSGCSG*CCAVCS
Trigger: ACTACAAACAGCACAGCAGCAGCCACTACAGCCACT...CAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTACTGTACACCGGGTTTaGTGTTGTTCTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: YIMSLGMVLAKNLQLALFTVHRV*CCSSLS
Trigger: AGAAAGAGAAGAACAACAGCAAACCCGGTGTACAGT...AAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAACTCTGTAACTGTACACCGGGTTTaGTGTTGTTCTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LAQASSLSLEPKNQKNSVTVHRV*CCSSLS
Trigger: AGAAAGAGAAGAACAACAGCAAACCCGGTGTACAGT...TACAGAGTTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACACAGAATAACAAGAATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATACTGGCCACTTTTTCTaGAAACACTGCAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: TQNNKNQLANSGATWHKHTGHFF*KHCKNP
Trigger: AGGATTTTTGCAGTGTTTGCAGAAAAAGTGGCCAGT...ATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp ACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCTTTCTCCTCTTCTTTTaGTGCTTTGTAGGCGATGTA +
Preference number: 4 (lower is better)
Translates to: TGKPTHSLDLSFYLNKRLFLLFF*CFVGDV
Trigger: TACATCGCCTACAAAGCAGCAAAAGAAGAGGAGAAA...GAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGTTTCTCCTCTTCTTTTaGTGCTTTGTAGGCGATGTA +
Preference number: 4 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQFLLFF*CFVGDV
Trigger: TACATCGCCTACAAAGCAGCAAAAGAAGAGGAGAAA...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp AAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTATTGACTGGTGTGTTCTaGACATCAGTGCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: KSLGTGKPTHSLDLSFYLLTGVF*TSVLST
Trigger: TGTGCTCAGCACTGATGTGCAGAACACACCAGTCAA...TAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAATAGGAATGTTATTCTaGGCCACAGGCTTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: KSLGTGKPTHSLDLSFYLIGMLF*ATGLGR
Trigger: TCGACCCAAGCCTGTGGCCCAGAATAACATTCCTAT...TAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TTTGGTTTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGAGGGAGTCTGGTCCCTaGAGTAGCTATGACAATGCT +
Preference number: 4 (lower is better)
Translates to: FGFMVVKSLGTGKPTHSLRESGP*SSYDNA
Trigger: AGCATTGTCATAGCTACTCCAGGGACCAGACTCCCT...CAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGTGGATTTCTTCTAGATaGTCATGTGTTACCAACCCT +
Preference number: 4 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQWISSR*SCVTNP
Trigger: AGGGTTGGTAACACATGACCATCTAGAAGAAATCCA...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTCCTGCCTCTTGCTTTaGATTTCTTCTAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: RESNILCHLAWCWQRTSSSCLLL*ISSRWS
Trigger: TGACCATCTAGAAGAAATCCAAAGCAAGAGGCAGGA...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAATGTAGGAATGAACAATaGCTAAGGTTCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKCRNEQ*LRFQAK
Trigger: CTTGGCCTGGAACCTTAGCCATTGTTCATTCCTACA...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTATGTAGGAATGAACAATaGCTAAGGTTCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: CGGCCRHTLVYNRESNILCRNEQ*LRFQAK
Trigger: CTTGGCCTGGAACCTTAGCCATTGTTCATTCCTACA...TAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp GCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATAACAAGTTAGTCTCTTCCCCCTaGTTACAGTTCGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: ALFHVTWSSLCMYTQNNKLVSSP*LQFAVQ
Trigger: CTGCACAGCGAACTGTAACCAGGGGGAAGAGACTAA...CTTGTTATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp TGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTATCTCACTCAAAGCTGTaGTTTTGGCTTGGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: CGGCCRHTLVYNRESNILSHSKL*FWLGVH
Trigger: ATGAACTCCAAGCCAAAATCACAGCTTTGAGTGAGA...TAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp TATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTTTTGTTTTCAGACTGTaGCAATGGCTGTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: YIMSLGMVLAKNLQLALFFVFRL*QWLYLE
Trigger: TTCCAGATACAGCCATTGTCACAGTCTGAAAACAAA...AAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TTTGGTTTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGTGGAACTTGTCCGGCTaGTCTTGTTTGACTATCAGG +
Preference number: 4 (lower is better)
Translates to: FGFMVVKSLGTGKPTHSLWNLSG*SCLTIR
Trigger: CCTGATAGTCAAACAAGAGCAGCCGGACAAGTTCCA...CAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAAACTGTACACCGGGTTTaGTGTTGTTCTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKTVHRV*CCSSLS
Trigger: AGAAAGAGAAGAACAACAGCAAACCCGGTGTACAGT...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGGTTAAGGTAAGTGACTaGACTCTTCTTACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: FMVVKSLGTGKPTHSLDLVKVSD*TLLTLW
Trigger: CCAGAGCGTAAGAAGAGTGCAGTCACTTACCTTAAC...CAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATTCCTGCCTCTTGCTTTaGATTTCTTCTAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: QLALFHVTWSSLCMYTQNSCLLL*ISSRWS
Trigger: TGACCATCTAGAAGAAATCCAAAGCAAGAGGCAGGA...ATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp TTTGGTTTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGACCTTACTAGACGTCTaGAGGTTGACTGGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: FGFMVVKSLGTGKPTHSLTLLDV*RLTGVF
Trigger: GAACACACCAGTCAACCTCCAGACGTCTAGTAAGGT...CAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp GCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATAACAAGAGGTTCTTGCGCAGCTaGTCAACTACTCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: ALFHVTWSSLCMYTQNNKRFLRS*STTLFC
Trigger: ACAGAAAAGAGTAGTTGAGCAGCTGCGCAAGAACCT...CTTGTTATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTATGTCACTTGCGTTTTGGCTATGGTTaGAGTCTGTCCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: CCRHTLVYNRESNILCHLRFGYG*SLSIDN
Trigger: GTTGTCAATGGACAGACTGCAACCATAGCCAAAACG...CAAGTGACATAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAACTCTGTATTCTTTCCTGCCTCTTaGTTTGGATTTCTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: LAQASSLSLEPKNQKNSVFFPAS*FGFLLD
Trigger: ATCTAGAAGAAATCCAAAGCAAGAGGCAGGAAAGAA...TACAGAGTTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAAACTGGCCACTTTTTCTaGAAACACTGCAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKTGHFF*KHCKNP
Trigger: AGGATTTTTGCAGTGTTTGCAGAAAAAGTGGCCAGT...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp CAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATTGGATTTCTTCTAGATaGTCATGTGTTACCAACCCT +
Preference number: 4 (lower is better)
Translates to: QLALFHVTWSSLCMYTQNWISSR*SCVTNP
Trigger: AGGGTTGGTAACACATGACCATCTAGAAGAAATCCA...ATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR TCA 90 bp TTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGTTGGCTTGGAGTTCATaGAGCTGTTTCTTTAAGTCA +
Preference number: 4 (lower is better)
Translates to: FMVVKSLGTGKPTHSLDLLAWSS*SCFFKS
Trigger: TGACTTAAAGAAACAGCTTCATGAACTCCAAGCCAA...CAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp GCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATAACAAGTCTCACTCAAAGCTGTaGTTTTGGCTTGGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: ALFHVTWSSLCMYTQNNKSHSKL*FWLGVH
Trigger: ATGAACTCCAAGCCAAAATCACAGCTTTGAGTGAGA...CTTGTTATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp TGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTATGTCACTTGTGCTTGTTTTTCCTCTaGTTCTGGGTGGGATTTAAC +
Preference number: 4 (lower is better)
Translates to: CCRHTLVYNRESNILCHLCLFFL*FWVGFN
Trigger: GTTAAATCCCACCCAGAAGCAGAGGAAAAACAAGCA...CAAGTGACATAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR GCA 90 bp CAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATTTCTTTCCTGCCTCTTaGTTTGGATTTCTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: QLALFHVTWSSLCMYTQNFFPAS*FGFLLD
Trigger: ATCTAGAAGAAATCCAAAGCAAGAGGCAGGAAAGAA...ATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTATGGATTTCTTCTAGATaGTCATGTGTTACCAACCCT +
Preference number: 4 (lower is better)
Translates to: KSLGTGKPTHSLDLSFYLWISSR*SCVTNP
Trigger: AGGGTTGGTAACACATGACCATCTAGAAGAAATCCA...TAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CCA 90 bp TGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTATGTCACTTGTCCTGCCTCTTGCTTTaGATTTCTTCTAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: CCRHTLVYNRESNILCHLSCLLL*ISSRWS
Trigger: TGACCATCTAGAAGAAATCCAAAGCAAGAGGCAGGA...CAAGTGACATAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CCA 90 bp AAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTATGGATTTCTTCTAGATaGTCATGTGTTACCAACCTC +
Preference number: 4 (lower is better)
Translates to: KSLGTGKPTHSLDLSFYLWISSR*SCVTNL
Trigger: GAGGTTGGTAACACATGACCATCTAGAAGAAATCCA...TAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp GCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATAACAAGTTGGCTTGGAGTTCATaGAGCTGTTTCTTTAAGTCA +
Preference number: 4 (lower is better)
Translates to: ALFHVTWSSLCMYTQNNKLAWSS*SCFFKS
Trigger: TGACTTAAAGAAACAGCTTCATGAACTCCAAGCCAA...CTTGTTATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR TCA 90 bp GCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATAACAAGTTTGTTTTCAGACTGTaGCAATGGCTGTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: ALFHVTWSSLCMYTQNNKFVFRL*QWLYLE
Trigger: TTCCAGATACAGCCATTGTCACAGTCTGAAAACAAA...CTTGTTATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GAGCGAGGAGGGGGCGGACCCGGCCCTGCAGGAAACTGGCACACCAGTCTAGAGGTGCAGTCTGGGCCATaGGAGAGGGCCCCCGCCGTG +
Preference number: 5 (lower is better)
Translates to: ERGGGGPGPAGNWHTSLEVQSGP*ERAPAV
Trigger: CACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCAC...CTCTAGACTGGTGTGCCAGTTTCCTGCAGGGCCGGGTCCGCCCCCTCCTCGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS GCA 90 bp CCCGCCGTGGCCTCTGAGTCCACAGGTCTGCAGAGGTCGACGCCATaGACAAGGCGGATGAGCCGCTTCACCTTGTCCAGGGAGCTGCGC +
Preference number: 5 (lower is better)
Translates to: PAVASESTGLQRSTP*TRRMSRFTLSRELR
Trigger: GCGCAGCTCCCTGGACAAGGTGAAGCGGCTCATCCGCCTTGTGCATGGCGTCGACCTCTGCAGACCTGTGGACTCAGAGGCCACGGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS CCA 90 bp TGGCAGGGGGAGTGCAGTCTGGGCCATTGGAGAGGGCCCCCGCCGTaGCCTCTGAGTCCACAGGTCTGCAGAGGTCGACGCCATGCACAA +
Preference number: 5 (lower is better)
Translates to: WQGECSLGHWRGPPP*PLSPQVCRGRRHAQ
Trigger: TTGTGCATGGCGTCGACCTCTGCAGACCTGTGGACTCAGAGGCCACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCACTCCCCCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS-3UTR CAA 90 bp AGGGAGGAGCGAGGAGGGGGCGGACCCGGCCCTGCAGGAAACTGGCACACCAGTCAGATCCACATGCCCTaGGGAATTGTTTTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: REERGGGGPGPAGNWHTSQIHMP*GIVFRG
Trigger: GCCCCTGAAAACAATTCCCAAGGGCATGTGGATCTG...ACTGGTGTGCCAGTTTCCTGCAGGGCCGGGTCCGCCCCCTCCTCGCTCCTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS TCA 90 bp CTGAGTCCACAGGTCTGCAGAGGTCGACGCCATGCACAAGGCGGATaGGCCGCTTCACCTTGTCCAGGGAGCTGCGCATCTCCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: LSPQVCRGRRHAQGG*AASPCPGSCASPSA
Trigger: GGCAGAAGGAGATGCGCAGCTCCCTGGACAAGGTGAAGCGGCTCATCCGCCTTGTGCATGGCGTCGACCTCTGCAGACCTGTGGACTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS-3UTR CAA 90 bp CAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATGGTGTGGAGGCGGCGTaGGCAGGGGGAGTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: QKRTHRGCGGCCRHTLVYGVEAA*AGGVQS
Trigger: AGACTGCACTCCCCCTGCCAACGCCGCCTCCACACC...ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCCTCCCTCCGCCCGTCGGTGTGGAGGCGGCGTaGGCAGGGGGAGTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: KQTAPSKDLKPALLPPPVGVEAA*AGGVQS
Trigger: AGACTGCACTCCCCCTGCCAACGCCGCCTCCACACC...GACGGGCGGAGGGAGGAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AGGGAGGAGCGAGGAGGGGGCGGACCCGGCCCTGCAGGAAACTGGCACACCAGTTTGACTATCAGGTTCTaGCGCAGCTGCTCAACTACT +
Preference number: 5 (lower is better)
Translates to: REERGGGGPGPAGNWHTSLTIRF*RSCSTT
Trigger: AGTAGTTGAGCAGCTGCGCAAGAACCTGATAGTCAA...ACTGGTGTGCCAGTTTCCTGCAGGGCCGGGTCCGCCCCCTCCTCGCTCCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGGTGTGGAGGCGGCGTaGGCAGGGGGAGTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: NEPTVAVEAAAGTHWCIIGVEAA*AGGVQS
Trigger: AGACTGCACTCCCCCTGCCAACGCCGCCTCCACACC...TATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS GCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCGGTTGCTGCGGTTGCTGCTaGTGCAGTGGCTGTAGTGGCTGCTGCTGTGCTGTTTGTAGTTTG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCGCCGCC*CSGCSGCCCAVCSL
Trigger: CAAACTACAAACAGCACAGCAGCAGCCACTACAGCCACTGCAGCAGCAGCAACCGCAGCAACCGCAGCAGCAGCAGCAGCAGCAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159366.8
ENSMUST00000159961.8
CDS-3UTR CAA 90 bp GGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCGTGCAGTCTGGGCCATaGGAGAGGGCCCCCGCCGTG +
Preference number: 5 (lower is better)
Translates to: GMVLAKNLQLALFHVTWSVQSGP*ERAPAV
Trigger: CACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCAC...GGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAGGTGTGGAGGCGGCGTaGGCAGGGGGAGTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: INWQTRVPPGTSIFSLSGGVEAA*AGGVQS
Trigger: AGACTGCACTCCCCCTGCCAACGCCGCCTCCACACC...TCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGGGTGTGGAGGCGGCGTaGGCAGGGGGAGTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: NQLANSGATWHKHLLSLWGVEAA*AGGVQS
Trigger: AGACTGCACTCCCCCTGCCAACGCCGCCTCCACACC...CCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS GCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCGGTTGCTGCGGTTGCTGCTGCTaGAGTGGCTGTAGTGGCTGCTGCTGTGCTGTTTGTAGTTTGTTT +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCGCCGCCC*SGCSGCCCAVCSLF
Trigger: AAACAAACTACAAACAGCACAGCAGCAGCCACTACAGCCACTGCAGCAGCAGCAACCGCAGCAACCGCAGCAGCAGCAGCAGCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159366.8
ENSMUST00000159961.8
CDS CCA 90 bp GCTGCAAGCATGGGAGGAGGCGCTGGAGCGATAGGAATGTTATTCTaGGCCACAGGCTTGGGTCGAACCTGTGGAAGGAAGTTTGGGCGT +
Preference number: 5 (lower is better)
Translates to: AASMGGGAGAIGMLF*ATGLGRTCGRKFGR
Trigger: ACGCCCAAACTTCCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGAATAACATTCCTATCGCTCCAGCGCCTCCTCCCATGCTTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159727.2
ENSMUST00000159961.8
CDS CCA 90 bp AGGCCTCTGGATAAGCTGAGGAGCTGCAAGCATGGGAGGAGGCGCTaGAGCGATAGGAATGTTATTCTGGGCCACAGGCTTGGGTCGAAC +
Preference number: 5 (lower is better)
Translates to: RPLDKLRSCKHGRRR*SDRNVILGHRLGSN
Trigger: GTTCGACCCAAGCCTGTGGCCCAGAATAACATTCCTATCGCTCCAGCGCCTCCTCCCATGCTTGCAGCTCCTCAGCTTATCCAGAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159727.2
ENSMUST00000159961.8
CDS-3UTR CAA 90 bp AGCGGCTCTGAAGGGGCAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCAGCCATGGGGAACGTTTaGGCTATGGTTGCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: SGSEGAVCVYVPGGPRYAAMGNV*AMVAVC
Trigger: ACAGACTGCAACCATAGCCAAAACGTTCCCCATGGC...TGCGTACCTGGGACCACCTGGGACATACACACACACTGCCCCTTCAGAGCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTGGTCTGCTCAGCCCACCCACCCAGATCCACATGCCCTaGGGAATTGTTTTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: WLYAWWSLLTSGLLSPPTQIHMP*GIVFRG
Trigger: GCCCCTGAAAACAATTCCCAAGGGCATGTGGATCTG...GGTGGGTGGGCTGAGCAGACCAGAAGTCAGCAAGCTCCACCACGCATACAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCCAGATCCACATGCCCTaGGGAATTGTTTTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: IRLCSSSVSSPPGLWHVRQIHMP*GIVFRG
Trigger: GCCCCTGAAAACAATTCCCAAGGGCATGTGGATCTG...GCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TGGGAACGCCCTGACACTATGCACATTCCATTTTGGCTTCAAACAGGAGATGAGGTGCAGTCTGGGCCATaGGAGAGGGCCCCCGCCGTG +
Preference number: 5 (lower is better)
Translates to: WERPDTMHIPFWLQTGDEVQSGP*ERAPAV
Trigger: CACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCAC...CTCATCTCCTGTTTGAAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGGTGCAGTCTGGGCCATaGGAGAGGGCCCCCGCCGTG +
Preference number: 5 (lower is better)
Translates to: LCHLAWCWQRTSSWHYFMVQSGP*ERAPAV
Trigger: CACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCAC...CATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCCGTGCAGTCTGGGCCATaGGAGAGGGCCCCCGCCGTG +
Preference number: 5 (lower is better)
Translates to: APPGTLNTAYVIYFPTLAVQSGP*ERAPAV
Trigger: CACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCAC...GGCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS CCA 90 bp GCCTTCTGGCTGTTGATGGCGGTCACCATAGCAATGGTAGGTCTCTaGCCCACAACAGAGGCAGGCATGGTCGCAGTTGCTGCTTTCAAG +
Preference number: 5 (lower is better)
Translates to: AFWLLMAVTIAMVGL*PTTEAGMVAVAAFK
Trigger: CTTGAAAGCAGCAACTGCGACCATGCCTGCCTCTGTTGTGGGCCAGAGACCTACCATTGCTATGGTGACCGCCATCAACAGCCAGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159366.8
ENSMUST00000159727.2
CDS CCA 90 bp CTCTGCCCCAGGCCCAGTGACCTTACTAGACGTCTGGAGGTTGACTaGTGTGTTCTGCACATCAGTGCTGAGCACAGCCTTCTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: LCPRPSDLTRRLEVD*CVLHISAEHSLLAV
Trigger: AACAGCCAGAAGGCTGTGCTCAGCACTGATGTGCAGAACACACCAGTCAACCTCCAGACGTCTAGTAAGGTCACTGGGCCTGGGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159727.2
CDS CCA 90 bp ATTTGGACAGCCTCTGCCCCAGGCCCAGTGACCTTACTAGACGTCTaGAGGTTGACTGGTGTGTTCTGCACATCAGTGCTGAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: IWTASAPGPVTLLDV*RLTGVFCTSVLSTA
Trigger: GGCTGTGCTCAGCACTGATGTGCAGAACACACCAGTCAACCTCCAGACGTCTAGTAAGGTCACTGGGCCTGGGGCAGAGGCTGTCCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159727.2
CDS-3UTR CAA 90 bp TGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAATTCTGGGCCACAGGCTaGGGTCGAACCTGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: WQTRVPPGTSIFSLSGTKFWATG*GRTCGR
Trigger: CCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGAA...TTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GCTGGGTACACATGTACCTTACCACTGCCTGATGGGCATGAGACAAGAAGCAGCTTCTGGGCCACAGGCTaGGGTCGAACCTGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: AGYTCTLPLPDGHETRSSFWATG*GRTCGR
Trigger: CCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGAA...GCTGCTTCTTGTCTCATGCCCATCAGGCAGTGGTAAGGTACATGTGTACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CGCCTTTCTCCCTCCGGACCCCTCGCACCCTCCCTTCCCTGCTTAACAAGGCCTTTCCAGGCCAAGGAATaGCTTCTTCCTTCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: RLSPSGPLAPSLPCLTRPFQAKE*LLPSLA
Trigger: TGCTAAAGAAGGAAGAAGCAATTCCTTGGCCTGGAA...AGGCCTTGTTAAGCAGGGAAGGGAGGGTGCGAGGGGTCCGGAGGGAGAAAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCGAACTGCTGAGCTCTTaGACCTTCTGCTCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: IRLCSSSVSSPPGLWHVRELLSS*TFCSSC
Trigger: ACAACTGGAGCAGAAGGTCAAAGAGCTCAGCAGTTC...GCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGGTGCAGTCTGGGCCATaGGAGAGGGCCCCCGCCGTG +
Preference number: 5 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQVQSGP*ERAPAV
Trigger: CACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCAC...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCGTGCAGTCTGGGCCATaGGAGAGGGCCCCCGCCGTG +
Preference number: 5 (lower is better)
Translates to: TGKPTHSLDLSFYLNKRLVQSGP*ERAPAV
Trigger: CACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCAC...GAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CACCTGACTGCAACTCACCCTGGGCTAAGAGCAAGAACACTGGAGAGGGGTGCACAGGCATGGTCGCAGTaGCTGCTTTCAAGACGAGAG +
Preference number: 5 (lower is better)
Translates to: HLTATHPGLRARTLERGAQAWSQ*LLSRRE
Trigger: CTCTCGTCTTGAAAGCAGCAACTGCGACCATGCCTG...TGCACCCCTCTCCAGTGTTCTTGCTCTTAGCCCAGGGTGAGTTGCAGTCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AGGAAGGCGATGGTGCTGACCTCTATGGCCTACACCTGCCAGCCTGACCCTGGGGTTACCAACCTCTGCTaGTTTTTCCTCTGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RKAMVLTSMAYTCQPDPGVTNLC*FFLCFW
Trigger: CCAGAAGCAGAGGAAAAACAAGCAGAGGTTGGTAAC...CCCAGGGTCAGGCTGGCAGGTGTAGGCCATAGAGGTCAGCACCATCGCCTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS TCA 90 bp GTTGTGGGTGTAAACTTGGTCAGCATGACAGGCCTCTGGATAAGCTaGGGAGCTGCAAGCATGGGAGGAGGCGCTGGAGCGATAGGAATG +
Preference number: 5 (lower is better)
Translates to: VVGVNLVSMTGLWIS*GAASMGGGAGAIGM
Trigger: CATTCCTATCGCTCCAGCGCCTCCTCCCATGCTTGCAGCTCCTCAGCTTATCCAGAGGCCTGTCATGCTGACCAAGTTTACACCCACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159727.2
ENSMUST00000159961.8
CDS CCA 90 bp CCAGGGAGTCTGGTCCCTGGAGTAGCTATGACAATGCTGGTGAGCTaGGCCATGGGGAACGTTTTGGCTATGGTTGCAGTCTGTCCATTG +
Preference number: 5 (lower is better)
Translates to: PGSLVPGVAMTMLVS*AMGNVLAMVAVCPL
Trigger: CAATGGACAGACTGCAACCATAGCCAAAACGTTCCCCATGGCCCAGCTCACCAGCATTGTCATAGCTACTCCAGGGACCAGACTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS CCA 90 bp TGGTTTGCTAAGCTGTACAGTCTGAGGTCCAGGGAGTCTGGTCCCTaGAGTAGCTATGACAATGCTGGTGAGCTGGGCCATGGGGAACGT +
Preference number: 5 (lower is better)
Translates to: WFAKLYSLRSRESGP*SSYDNAGELGHGER
Trigger: ACGTTCCCCATGGCCCAGCTCACCAGCATTGTCATAGCTACTCCAGGGACCAGACTCCCTGGACCTCAGACTGTACAGCTTAGCAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS CCA 90 bp AGGTTGACTGGTGTGTTCTGCACATCAGTGCTGAGCACAGCCTTCTaGCTGTTGATGGCGGTCACCATAGCAATGGTAGGTCTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RLTGVFCTSVLSTAF*LLMAVTIAMVGLWP
Trigger: GGGCCAGAGACCTACCATTGCTATGGTGACCGCCATCAACAGCCAGAAGGCTGTGCTCAGCACTGATGTGCAGAACACACCAGTCAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159366.8
ENSMUST00000159727.2
CDS-3UTR CAA 90 bp AAACAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTCCGGCTGCTCTTGTTaGACTATCAGGTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: KQKRTHRGCGGCCRHTLVSGCSC*TIRFLR
Trigger: GCGCAAGAACCTGATAGTCAAACAAGAGCAGCCGGA...CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCATGTCCGCCTTGTCCGGCTGCTCTaGTTTGACTATCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: IRLCSSSVSSPPGLWHVRLVRLL*FDYQVL
Trigger: AAGAACCTGATAGTCAAACAAGAGCAGCCGGACAAG...GCGGACATGCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAATTCTGGGCCACAGGCTaGGGTCGAACCTGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: SGATWHKHLLSLWNQRTKFWATG*GRTCGR
Trigger: CCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGAA...TTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCCTCCCTCCGCCCGTCGTTGTGGGTGTAAACTaGGTCAGCATGACAGGCCTC +
Preference number: 5 (lower is better)
Translates to: KQTAPSKDLKPALLPPPVVVGVN*VSMTGL
Trigger: GAGGCCTGTCATGCTGACCAAGTTTACACCCACAAC...GACGGGCGGAGGGAGGAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGCCATGGGGAACGTTTaGGCTATGGTTGCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: PTVAVEAAAGTHWCIIERAMGNV*AMVAVC
Trigger: ACAGACTGCAACCATAGCCAAAACGTTCCCCATGGC...TCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AGACAAGTCCAACAGGGGGTTGGCAGGTTGGGGGAGCTGAGACAGGATATCAGCGCACCGCATTGTATTTaGGAGGACGACCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: RQVQQGVGRLGELRQDISAPHCI*EDDLSS
Trigger: GGAAGAGAGGTCGTCCTCCAAAATACAATGCGGTGC...GCTGATATCCTGTCTCAGCTCCCCCAACCTGCCAACCCCCTGTTGGACTTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
CDS-3UTR CAA 90 bp ACAAGTCCAACAGGGGGTTGGCAGGTTGGGGGAGCTGAGACAGGATATCAGCCTACATGCCCTTGGGAATaGTTTTCAGGGGCGGCTCTA +
Preference number: 5 (lower is better)
Translates to: TSPTGGWQVGGAETGYQPTCPWE*FSGAAL
Trigger: TAGAGCCGCCCCTGAAAACAATTCCCAAGGGCATGT...AGGCTGATATCCTGTCTCAGCTCCCCCAACCTGCCAACCCCCTGTTGGACTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATCAGATCCACATGCCCTaGGGAATTGTTTTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: QKRTHRGCGGCCRHTLVYQIHMP*GIVFRG
Trigger: GCCCCTGAAAACAATTCCCAAGGGCATGTGGATCTG...ATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GGATGGGAGCTTGGAAGCGGCTCTGAAGGGGCAGTGTGTGTGTATGTCCCAGGTGAACTGCTGAGCTCTTaGACCTTCTGCTCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: GWELGSGSEGAVCVYVPGELLSS*TFCSSC
Trigger: ACAACTGGAGCAGAAGGTCAAAGAGCTCAGCAGTTC...ACCTGGGACATACACACACACTGCCCCTTCAGAGCCGCTTCCAAGCTCCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CGGCAGAGAGGCAGCTGTAGGTGTAGACAGACAGCTGGAGACACAGTCGCTTGGGAACTGCTGAGCTCTTaGACCTTCTGCTCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: RQRGSCRCRQTAGDTVAWELLSS*TFCSSC
Trigger: ACAACTGGAGCAGAAGGTCAAAGAGCTCAGCAGTTC...CCAAGCGACTGTGTCTCCAGCTGTCTGTCTACACCTACAGCTGCCTCTCTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCGGTGTGGAGGCGGCGTaGGCAGGGGGAGTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: TGKPTHSLDLSFYLNKRLGVEAA*AGGVQS
Trigger: AGACTGCACTCCCCCTGCCAACGCCGCCTCCACACC...GAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGGGTGTGGAGGCGGCGTaGGCAGGGGGAGTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQGVEAA*AGGVQS
Trigger: AGACTGCACTCCCCCTGCCAACGCCGCCTCCACACC...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCACAGGTCTAAAGGGACAACAGCCTTCTGGCTGTaGATGGCGGTCACCATAGCA +
Preference number: 5 (lower is better)
Translates to: QCVCMSQVVPGTHRSKGTTAFWL*MAVTIA
Trigger: TGCTATGGTGACCGCCATCAACAGCCAGAAGGCTGT...TGTCCCTTTAGACCTGTGCGTACCTGGGACCACCTGGGACATACACACACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGACTAGACGTCTGGAGGTaGACTGGTGTGTTCTGCACA +
Preference number: 5 (lower is better)
Translates to: PTVAVEAAAGTHWCIIERLDVWR*TGVFCT
Trigger: TGTGCAGAACACACCAGTCAACCTCCAGACGTCTAG...TCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AAACAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGCTGAGGAGGTGTTGCTaGAACCTGCAGAGTGACTGT +
Preference number: 5 (lower is better)
Translates to: KQKRTHRGCGGCCRHTLVLRRCC*NLQSDC
Trigger: ACAGTCACTCTGCAGGTTCAAGCAACACCTCCTCAG...CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS GCA 90 bp TGCTGCGGTTGCTGCGGTTGCTGCTGCTGCAGTGGCTGTAGTGGCTaGTGCTGTGCTGTTTGTAGTTTGTTTTCAGACTGTGACAATGGC +
Preference number: 5 (lower is better)
Translates to: CCGCCGCCCCSGCSG*CCAVCSLFSDCDNG
Trigger: GCCATTGTCACAGTCTGAAAACAAACTACAAACAGCACAGCAGCAGCCACTACAGCCACTGCAGCAGCAGCAACCGCAGCAACCGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159366.8
ENSMUST00000159961.8
CDS-3UTR CAA 90 bp GGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGATTCTGGGCCACAGGCTaGGGTCGAACCTGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: GATWHKHLLSLWNQRTKRFWATG*GRTCGR
Trigger: CCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGAA...TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATTCTGGGCCACAGGCTaGGGTCGAACCTGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: VAVEAAAGTHWCIIERVIFWATG*GRTCGR
Trigger: CCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGAA...TATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATGCCATGGGGAACGTTTaGGCTATGGTTGCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: KRTHRGCGGCCRHTLVYNAMGNV*AMVAVC
Trigger: ACAGACTGCAACCATAGCCAAAACGTTCCCCATGGC...ATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACCAGGACTGTGGCGGTTCTCTTCTCGTTTaGGTTTTGGTGCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: QKKSGFALLASPRHQDCGGSLLV*VLVQQV
Trigger: CACCTGCTGCACCAAAACCAAAACGAGAAGAGAACC...GCCACAGTCCTGGTGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CAA 90 bp AACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGCACCGCATTGTATTTaGGAGGACGACCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: NEPTVAVEAAAGTHWCIIAPHCI*EDDLSS
Trigger: GGAAGAGAGGTCGTCCTCCAAAATACAATGCGGTGC...TATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CAA 90 bp AAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATACATGCCCTTGGGAATaGTTTTCAGGGGCGGCTCTA +
Preference number: 5 (lower is better)
Translates to: KRTHRGCGGCCRHTLVYNTCPWE*FSGAAL
Trigger: TAGAGCCGCCCCTGAAAACAATTCCCAAGGGCATGT...ATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGACCTCACTTGACATGCCCTTGGGAATaGTTTTCAGGGGCGGCTCTA +
Preference number: 5 (lower is better)
Translates to: EQCLTDDTGRTQTHRPHLTCPWE*FSGAAL
Trigger: TAGAGCCGCCCCTGAAAACAATTCCCAAGGGCATGT...CAAGTGAGGTCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGACCTCACTTGCAGATCCACATGCCCTaGGGAATTGTTTTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: EQCLTDDTGRTQTHRPHLQIHMP*GIVFRG
Trigger: GCCCCTGAAAACAATTCCCAAGGGCATGTGGATCTG...CAAGTGAGGTCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTGGTCTGCTCAGCCCACCCACCTTCCAGGCCAAGGAATaGCTTCTTCCTTCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: WLYAWWSLLTSGLLSPPTFQAKE*LLPSLA
Trigger: TGCTAAAGAAGGAAGAAGCAATTCCTTGGCCTGGAA...GGTGGGTGGGCTGAGCAGACCAGAAGTCAGCAAGCTCCACCACGCATACAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTGGTGTGGAGGCGGCGTaGGCAGGGGGAGTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: YIMSLGMVLAKNLQLALFGVEAA*AGGVQS
Trigger: AGACTGCACTCCCCCTGCCAACGCCGCCTCCACACC...AAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AGACAAGTCCAACAGGGGGTTGGCAGGTTGGGGGAGCTGAGACAGGATATCAGCCATGGATATCACCCTTaGGCCAGTGTTCCTCATTGG +
Preference number: 5 (lower is better)
Translates to: RQVQQGVGRLGELRQDISHGYHP*ASVPHW
Trigger: CCAATGAGGAACACTGGCCAAAGGGTGATATCCATG...GCTGATATCCTGTCTCAGCTCCCCCAACCTGCCAACCCCCTGTTGGACTTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000068702.14
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCCAGGCATGGTCGCAGTaGCTGCTTTCAAGACGAGAG +
Preference number: 5 (lower is better)
Translates to: NWQTRVPPGTSIFSLSGTQAWSQ*LLSRRE
Trigger: CTCTCGTCTTGAAAGCAGCAACTGCGACCATGCCTG...GGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAACAGCCTTCTGGCTGTaGATGGCGGTCACCATAGCA +
Preference number: 5 (lower is better)
Translates to: WQTRVPPGTSIFSLSGTKTAFWL*MAVTIA
Trigger: TGCTATGGTGACCGCCATCAACAGCCAGAAGGCTGT...TTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATACTAGACGTCTGGAGGTaGACTGGTGTGTTCTGCACA +
Preference number: 5 (lower is better)
Translates to: NEPTVAVEAAAGTHWCIILDVWR*TGVFCT
Trigger: TGTGCAGAACACACCAGTCAACCTCCAGACGTCTAG...TATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATCTGAGGAGGTGTTGCTaGAACCTGCAGAGTGACTGT +
Preference number: 5 (lower is better)
Translates to: KRTHRGCGGCCRHTLVYNLRRCC*NLQSDC
Trigger: ACAGTCACTCTGCAGGTTCAAGCAACACCTCCTCAG...ATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS GCA 90 bp GACAATGCTGGTGAGCTGGGCCATGGGGAACGTTTTGGCTATGGTTaGAGTCTGTCCATTGACAACACGGACAGGGTGGATGGAATTCTG +
Preference number: 5 (lower is better)
Translates to: DNAGELGHGERFGYG*SLSIDNTDRVDGIL
Trigger: CAGAATTCCATCCACCCTGTCCGTGTTGTCAATGGACAGACTGCAACCATAGCCAAAACGTTCCCCATGGCCCAGCTCACCAGCATTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS-3UTR CAA 90 bp GCTGGGTACACATGTACCTTACCACTGCCTGATGGGCATGAGACAAGAAGCAGCTCCGGCTGCTCTTGTTaGACTATCAGGTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: AGYTCTLPLPDGHETRSSSGCSC*TIRFLR
Trigger: GCGCAAGAACCTGATAGTCAAACAAGAGCAGCCGGA...GCTGCTTCTTGTCTCATGCCCATCAGGCAGTGGTAAGGTACATGTGTACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCCTCCCTCCGCCCGTCCTTGTCCGGCTGCTCTaGTTTGACTATCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: KQTAPSKDLKPALLPPPVLVRLL*FDYQVL
Trigger: AAGAACCTGATAGTCAAACAAGAGCAGCCGGACAAG...GACGGGCGGAGGGAGGAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAATTCTGGGCCACAGGCTaGGGTCGAACCTGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: VPPGTSIFSLSGTKEPKEFWATG*GRTCGR
Trigger: CCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGAA...TTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GAACAGTGCCTGACTGATGACACAGGACGCACACAGACTCACCGACCTCACTTGGGTTCTCTTCTCGTTTaGGTTTTGGTGCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: EQCLTDDTGRTQTHRPHLGSLLV*VLVQQV
Trigger: CACCTGCTGCACCAAAACCAAAACGAGAAGAGAACC...CAAGTGAGGTCGGTGAGTCTGTGTGCGTCCTGTGTCATCAGTCAGGCACTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CAA 90 bp CAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCACAGGTCTAAAGGGACAGGTTCTCTTCTCGTTTaGGTTTTGGTGCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: QCVCMSQVVPGTHRSKGTGSLLV*VLVQQV
Trigger: CACCTGCTGCACCAAAACCAAAACGAGAAGAGAACC...TGTCCCTTTAGACCTGTGCGTACCTGGGACCACCTGGGACATACACACACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
CDS-3UTR CAA 90 bp ACAGACAGGACTGGGTCTGGCTGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTCACTGTACACCGGGTTaGCTGTTGTTCTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: TDRTGSGWLYAWWSLLTSHCTPG*LLFFSF
Trigger: GAAAGAGAAGAACAACAGCAAACCCGGTGTACAGTG...AGAAGTCAGCAAGCTCCACCACGCATACAGCCAGCCAGACCCAGTCCTGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AGGCCACACAAGGCAAGCATAGTGATTCTAGCCCAGGAACACCCAGGAAGCATGAACCCCAGCACCGCATaGTATTTTGGAGGACGACCT +
Preference number: 5 (lower is better)
Translates to: RPHKASIVILAQEHPGSMNPSTA*YFGGRP
Trigger: AGGTCGTCCTCCAAAATACAATGCGGTGCTGGGGTT...CATGCTTCCTGGGTGTTCCTGGGCTAGAATCACTATGCTTGCCTTGTGTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
CDS-3UTR CAA 90 bp TGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAACATGCCCTTGGGAATaGTTTTCAGGGGCGGCTCTA +
Preference number: 5 (lower is better)
Translates to: WQTRVPPGTSIFSLSGTKTCPWE*FSGAAL
Trigger: TAGAGCCGCCCCTGAAAACAATTCCCAAGGGCATGT...TTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAAGGTGTGGAGGCGGCGTaGGCAGGGGGAGTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKGVEAA*AGGVQS
Trigger: AGACTGCACTCCCCCTGCCAACGCCGCCTCCACACC...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CAAGGTCTGAGACCGTGGGAACGCCCTGACACTATGCACATTCCATTTTGGCTTACAGCCTTCTGGCTGTaGATGGCGGTCACCATAGCA +
Preference number: 5 (lower is better)
Translates to: QGLRPWERPDTMHIPFWLTAFWL*MAVTIA
Trigger: TGCTATGGTGACCGCCATCAACAGCCAGAAGGCTGT...AAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCACGGTCTCAGACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCTTAGAACCACAGCCTTCTGGCTGTaGATGGCGGTCACCATAGCA +
Preference number: 5 (lower is better)
Translates to: KRVVSIHTHLGRAALLRTTAFWL*MAVTIA
Trigger: TGCTATGGTGACCGCCATCAACAGCCAGAAGGCTGT...GGTTCTAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGGTTACCAACCTCTGCTaGTTTTTCCTCTGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: THRGCGGCCRHTLVYNREVTNLC*FFLCFW
Trigger: CCAGAAGCAGAGGAAAAACAAGCAGAGGTTGGTAAC...CTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS TCA 90 bp ATGCCCTTGGGAATTGTTTTCAGGGGCGGCTCTAAGCAGTCCAGATaGTACACACGGGAACACGTGTCACACATCAGCAACTGGCCACTT +
Preference number: 5 (lower is better)
Translates to: MPLGIVFRGGSKQSR*YTREHVSHISNWPL
Trigger: AAGTGGCCAGTTGCTGATGTGTGACACGTGTTCCCGTGTGTATCATCTGGACTGCTTAGAGCCGCCCCTGAAAACAATTCCCAAGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
ENSMUST00000161067.2
CDS GCA 90 bp TGTAAACTTGGTCAGCATGACAGGCCTCTGGATAAGCTGAGGAGCTaGAAGCATGGGAGGAGGCGCTGGAGCGATAGGAATGTTATTCTG +
Preference number: 5 (lower is better)
Translates to: CKLGQHDRPLDKLRS*KHGRRRWSDRNVIL
Trigger: CAGAATAACATTCCTATCGCTCCAGCGCCTCCTCCCATGCTTGCAGCTCCTCAGCTTATCCAGAGGCCTGTCATGCTGACCAAGTTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159727.2
ENSMUST00000159961.8
CDS CCA 90 bp GTTGCAGTCTGTCCATTGACAACACGGACAGGGTGGATGGAATTCTaGGATGTGGGGAGGGTTGTGGGTGTAAACTTGGTCAGCATGACA +
Preference number: 5 (lower is better)
Translates to: VAVCPLTTRTGWMEF*DVGRVVGVNLVSMT
Trigger: TGTCATGCTGACCAAGTTTACACCCACAACCCTCCCCACATCCCAGAATTCCATCCACCCTGTCCGTGTTGTCAATGGACAGACTGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159727.2
ENSMUST00000159961.8
CDS-3UTR CAA 90 bp CAAGGTCTGAGACCGTGGGAACGCCCTGACACTATGCACATTCCATTTTGGCTTTCCGGCTGCTCTTGTTaGACTATCAGGTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: QGLRPWERPDTMHIPFWLSGCSC*TIRFLR
Trigger: GCGCAAGAACCTGATAGTCAAACAAGAGCAGCCGGA...AAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCACGGTCTCAGACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATCTTGTCCGGCTGCTCTaGTTTGACTATCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: KRTHRGCGGCCRHTLVYNLVRLL*FDYQVL
Trigger: AAGAACCTGATAGTCAAACAAGAGCAGCCGGACAAG...ATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCACAGGTCTAAAGGGACACTTGTCCGGCTGCTCTaGTTTGACTATCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: QCVCMSQVVPGTHRSKGTLVRLL*FDYQVL
Trigger: AAGAACCTGATAGTCAAACAAGAGCAGCCGGACAAG...TGTCCCTTTAGACCTGTGCGTACCTGGGACCACCTGGGACATACACACACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TCGGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTTTCTGGGCCACAGGCTaGGGTCGAACCTGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: SAPPGTLNTAYVIYFPTLFWATG*GRTCGR
Trigger: CCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGAA...AAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ACACAGAATAACAAGAATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATTTCTGGGCCACAGGCTaGGGTCGAACCTGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: TQNNKNQLANSGATWHKHFWATG*GRTCGR
Trigger: CCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGAA...ATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGGTTGTGGGTGTAAACTaGGTCAGCATGACAGGCCTC +
Preference number: 5 (lower is better)
Translates to: NQLANSGATWHKHLLSLWVVGVN*VSMTGL
Trigger: GAGGCCTGTCATGCTGACCAAGTTTACACCCACAAC...CCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CAAGGTCTGAGACCGTGGGAACGCCCTGACACTATGCACATTCCATTTTGGCTTGCCATGGGGAACGTTTaGGCTATGGTTGCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: QGLRPWERPDTMHIPFWLAMGNV*AMVAVC
Trigger: ACAGACTGCAACCATAGCCAAAACGTTCCCCATGGC...AAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCACGGTCTCAGACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATCACTGTACACCGGGTTaGCTGTTGTTCTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: KRTHRGCGGCCRHTLVYNHCTPG*LLFFSF
Trigger: GAAAGAGAAGAACAACAGCAAACCCGGTGTACAGTG...ATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCTTAGAACCGCACCGCATTGTATTTaGGAGGACGACCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: KRVVSIHTHLGRAALLRTAPHCI*EDDLSS
Trigger: GGAAGAGAGGTCGTCCTCCAAAATACAATGCGGTGC...GGTTCTAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
CDS-3UTR CAA 90 bp CCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGATTCCAGGCCAAGGAATaGCTTCTTCCTTCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: PTVAVEAAAGTHWCIIERFQAKE*LLPSLA
Trigger: TGCTAAAGAAGGAAGAAGCAATTCCTTGGCCTGGAA...TCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AAACAAAAACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTTCCAGGCCAAGGAATaGCTTCTTCCTTCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: KQKRTHRGCGGCCRHTLVFQAKE*LLPSLA
Trigger: TGCTAAAGAAGGAAGAAGCAATTCCTTGGCCTGGAA...CACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTTTTTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTTTCTCCTCTTCTTTaGCTGCTTTGTAGGCGATGT +
Preference number: 5 (lower is better)
Translates to: PTVAVEAAAGTHWCIIERVSPLL*LLCRRC
Trigger: ACATCGCCTACAAAGCAGCAAAAGAAGAGGAGAAAC...TCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TGGCTCAGAAAGAGAGAGGACCCTTTAGGGGAGGAAGGCGATGGTGCTGACCTCGTTTCTCCTCTTCTTTaGCTGCTTTGTAGGCGATGT +
Preference number: 5 (lower is better)
Translates to: WLRKREDPLGEEGDGADLVSPLL*LLCRRC
Trigger: ACATCGCCTACAAAGCAGCAAAAGAAGAGGAGAAAC...GAGGTCAGCACCATCGCCTTCCTCCCCTAAAGGGTCCTCTCTCTTTCTGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ACAGACAGGACTGGGTCTGGCTGGCTGTATGCGTGGTGGAGCTTGCTGACTTCTGTTTCTCCTCTTCTTTaGCTGCTTTGTAGGCGATGT +
Preference number: 5 (lower is better)
Translates to: TDRTGSGWLYAWWSLLTSVSPLL*LLCRRC
Trigger: ACATCGCCTACAAAGCAGCAAAAGAAGAGGAGAAAC...AGAAGTCAGCAAGCTCCACCACGCATACAGCCAGCCAGACCCAGTCCTGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATAACAAGGTGCAGTCTGGGCCATaGGAGAGGGCCCCCGCCGTG +
Preference number: 5 (lower is better)
Translates to: ALFHVTWSSLCMYTQNNKVQSGP*ERAPAV
Trigger: CACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCAC...CTTGTTATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTATGTCACTTGGTGCAGTCTGGGCCATaGGAGAGGGCCCCCGCCGTG +
Preference number: 5 (lower is better)
Translates to: CCRHTLVYNRESNILCHLVQSGP*ERAPAV
Trigger: CACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCAC...CAAGTGACATAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCTTAGAACCCTAGACGTCTGGAGGTaGACTGGTGTGTTCTGCACA +
Preference number: 5 (lower is better)
Translates to: KRVVSIHTHLGRAALLRTLDVWR*TGVFCT
Trigger: TGTGCAGAACACACCAGTCAACCTCCAGACGTCTAG...GGTTCTAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CAAGGTCTGAGACCGTGGGAACGCCCTGACACTATGCACATTCCATTTTGGCTTCTAGACGTCTGGAGGTaGACTGGTGTGTTCTGCACA +
Preference number: 5 (lower is better)
Translates to: QGLRPWERPDTMHIPFWLLDVWR*TGVFCT
Trigger: TGTGCAGAACACACCAGTCAACCTCCAGACGTCTAG...AAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCACGGTCTCAGACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAACTGAGGAGGTGTTGCTaGAACCTGCAGAGTGACTGT +
Preference number: 5 (lower is better)
Translates to: SGATWHKHLLSLWNQRTKLRRCC*NLQSDC
Trigger: ACAGTCACTCTGCAGGTTCAAGCAACACCTCCTCAG...TTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS GCA 90 bp TGCAGCAGGTGGGGTAACGGTACGGCTCTCTGCTTGTTTTTCCTCTaGTTCTGGGTGGGATTTAACTGTCTGTTTCTCCAGGCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: CSRWGNGTALCLFFL*FWVGFNCLFLQAWF
Trigger: AAACCAAGCCTGGAGAAACAGACAGTTAAATCCCACCCAGAAGCAGAGGAAAAACAAGCAGAGAGCCGTACCGTTACCCCACCTGCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000159961.8
ENSMUST00000161067.2
CDS-3UTR CAA 90 bp AATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGTGGATCCTGCTTCATTaGGGCAACCAGTTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: NQLANSGATWHKHLLSLWWILLH*GNQFLV
Trigger: CACCAGAAACTGGTTGCCCAAATGAAGCAGGATCCA...CCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCCGGCTGCTCTTGTTaGACTATCAGGTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: HGAGKEPPAGTISCNMVQSGCSC*TIRFLR
Trigger: GCGCAAGAACCTGATAGTCAAACAAGAGCAGCCGGA...CTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCTCCGGCTGCTCTTGTTaGACTATCAGGTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: WHGAGKEPPAGTISCNMVSGCSC*TIRFLR
Trigger: GCGCAAGAACCTGATAGTCAAACAAGAGCAGCCGGA...GACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTTCTGGGCCACAGGCTaGGGTCGAACCTGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: IYYVTWHGAGKEPPAGTIFWATG*GRTCGR
Trigger: CCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGAA...AATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAGGTTCTCTTCTCGTTTaGGTTTTGGTGCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: INWQTRVPPGTSIFSLSGGSLLV*VLVQQV
Trigger: CACCTGCTGCACCAAAACCAAAACGAGAAGAGAACC...TCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CAA 90 bp GGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCGGTTCTCTTCTCGTTTaGGTTTTGGTGCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GMVLAKNLQLALFHVTWSGSLLV*VLVQQV
Trigger: CACCTGCTGCACCAAAACCAAAACGAGAAGAGAACC...GGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CAA 90 bp CAGTGTGTGTGTATGTCCCAGGTGGTCCCAGGTACGCACAGGTCTAAAGGGACAACACCGGGTTTGCTGTaGTTCTTCTCTTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: QCVCMSQVVPGTHRSKGTTPGLL*FFSFFP
Trigger: AGGAAAGAAAGAGAAGAACAACAGCAAACCCGGTGT...TGTCCCTTTAGACCTGTGCGTACCTGGGACCACCTGGGACATACACACACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AACGAACCCACCGTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAACACCGGGTTTGCTGTaGTTCTTCTCTTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: NEPTVAVEAAAGTHWCIITPGLL*FFSFFP
Trigger: AGGAAAGAAAGAGAAGAACAACAGCAAACCCGGTGT...TATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCACGGTGGGTTCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGACATGCCCTTGGGAATaGTTTTCAGGGGCGGCTCTA +
Preference number: 5 (lower is better)
Translates to: HGAGKEPPAGTISCNMVQTCPWE*FSGAAL
Trigger: TAGAGCCGCCCCTGAAAACAATTCCCAAGGGCATGT...CTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GTGGCTGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATACAGATCCACATGCCCTaGGGAATTGTTTTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: VAVEAAAGTHWCIIERVIQIHMP*GIVFRG
Trigger: GCCCCTGAAAACAATTCCCAAGGGCATGTGGATCTG...TATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAGAACTGCTGAGCTCTTaGACCTTCTGCTCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: SGATWHKHLLSLWNQRTKELLSS*TFCSSC
Trigger: ACAACTGGAGCAGAAGGTCAAAGAGCTCAGCAGTTC...TTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTTGGGCTGAGGAGGTGTaGCTTGAACCTGTGATGCAG +
Preference number: 5 (lower is better)
Translates to: YVTWHGAGKEPPAGTISCWAEEV*LEPVMQ
Trigger: CTGCATCACAGGTTCAAGCAACACCTCCTCAGCCCA...ACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068702.14
ENSMUST00000111292.8
CDS-3UTR CAA 90 bp GAAGAAGAGAAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCATGGATATCACCCTTaGGCCAGTGTTCCTCATTGG +
Preference number: 5 (lower is better)
Translates to: EEEKRVVSIHTHLGRAALHGYHP*ASVPHW
Trigger: CCAATGAGGAACACTGGCCAAAGGGTGATATCCATG...CAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTTCTCTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068702.14
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TGGGAACGCCCTGACACTATGCACATTCCATTTTGGCTTCAAACAGGAGATGAGACAGCCTTCTGGCTGTaGATGGCGGTCACCATAGCA +
Preference number: 5 (lower is better)
Translates to: WERPDTMHIPFWLQTGDETAFWL*MAVTIA
Trigger: TGCTATGGTGACCGCCATCAACAGCCAGAAGGCTGT...CTCATCTCCTGTTTGAAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TACTCTATCATGCAAGGTCTCCGCTACCCTCAACAGGACCGTCAGCCTGAAAAACTGAGGAGGTGTTGCTaGAACCTGCAGAGTGACTGT +
Preference number: 5 (lower is better)
Translates to: YSIMQGLRYPQQDRQPEKLRRCC*NLQSDC
Trigger: ACAGTCACTCTGCAGGTTCAAGCAACACCTCCTCAG...TTTTTCAGGCTGACGGTCCTGTTGAGGGTAGCGGAGACCTTGCATGATAGAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS TCA 90 bp TTAACTGTCTGTTTCTCCAGGCTTGGTTTGCTAAGCTGTACAGTCTaGGGTCCAGGGAGTCTGGTCCCTGGAGTAGCTATGACAATGCTG +
Preference number: 5 (lower is better)
Translates to: LTVCFSRLGLLSCTV*GPGSLVPGVAMTML
Trigger: CAGCATTGTCATAGCTACTCCAGGGACCAGACTCCCTGGACCTCAGACTGTACAGCTTAGCAAACCAAGCCTGGAGAAACAGACAGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000159961.8
ENSMUST00000161067.2
CDS TCA 90 bp GGATTTAACTGTTTCTCCAGGCTTGGTTTGCTAAGCTGTACAGTCTaGGGTCCAGGGAGTCTGGTCCCTGGAGTAGCTATGACAATGCTG +
Preference number: 5 (lower is better)
Translates to: GFNCFSRLGLLSCTV*GPGSLVPGVAMTML
Trigger: CAGCATTGTCATAGCTACTCCAGGGACCAGACTCCCTGGACCTCAGACTGTACAGCTTAGCAAACCAAGCCTGGAGAAACAGTTAAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCTGGATCCTGCTTCATTaGGGCAACCAGTTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: WHGAGKEPPAGTISCNMVWILLH*GNQFLV
Trigger: CACCAGAAACTGGTTGCCCAAATGAAGCAGGATCCA...GACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCTTAGAACCTTGACTATCAGGTTCTaGCGCAGCTGCTCAACTACT +
Preference number: 5 (lower is better)
Translates to: KRVVSIHTHLGRAALLRTLTIRF*RSCSTT
Trigger: AGTAGTTGAGCAGCTGCGCAAGAACCTGATAGTCAA...GGTTCTAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAATTGACTATCAGGTTCTaGCGCAGCTGCTCAACTACT +
Preference number: 5 (lower is better)
Translates to: SGATWHKHLLSLWNQRTKLTIRF*RSCSTT
Trigger: AGTAGTTGAGCAGCTGCGCAAGAACCTGATAGTCAA...TTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTTGGGCTGAGGAGGTGTaGCTTGAACCTGCTGTGATG +
Preference number: 5 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPAWAEEV*LEPAVM
Trigger: CATCACAGCAGGTTCAAGCAACACCTCCTCAGCCCA...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044036.15
ENSMUST00000111291.9
CDS-3UTR CAA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTGTTGTGGGTGTAAACTaGGTCAGCATGACAGGCCTC +
Preference number: 5 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSVVGVN*VSMTGL
Trigger: GAGGCCTGTCATGCTGACCAAGTTTACACCCACAAC...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCGTTGTGGGTGTAAACTaGGTCAGCATGACAGGCCTC +
Preference number: 5 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPVVGVN*VSMTGL
Trigger: GAGGCCTGTCATGCTGACCAAGTTTACACCCACAAC...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTGCCATGGGGAACGTTTaGGCTATGGTTGCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: YVTWHGAGKEPPAGTISCAMGNV*AMVAVC
Trigger: ACAGACTGCAACCATAGCCAAAACGTTCCCCATGGC...ACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTGCCATGGGGAACGTTTaGGCTATGGTTGCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSAMGNV*AMVAVC
Trigger: ACAGACTGCAACCATAGCCAAAACGTTCCCCATGGC...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGCACTGTACACCGGGTTaGCTGTTGTTCTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: NQLANSGATWHKHLLSLWHCTPG*LLFFSF
Trigger: GAAAGAGAAGAACAACAGCAAACCCGGTGTACAGTG...CCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCGCACCGCATTGTATTTaGGAGGACGACCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: GPSRNVKYCLCHILSHPCAPHCI*EDDLSS
Trigger: GGAAGAGAGGTCGTCCTCCAAAATACAATGCGGTGC...GCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
CDS-3UTR CAA 90 bp TATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACCCCAGCACCGCATaGTATTTTGGAGGACGACCT +
Preference number: 5 (lower is better)
Translates to: YVTWHGAGKEPPAGTISCNPSTA*YFGGRP
Trigger: AGGTCGTCCTCCAAAATACAATGCGGTGCTGGGGTT...ACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CAA 90 bp ATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTAACCCCAGCACCGCATaGTATTTTGGAGGACGACCT +
Preference number: 5 (lower is better)
Translates to: MVLAKNLQLALFHVTWSSNPSTA*YFGGRP
Trigger: AGGTCGTCCTCCAAAATACAATGCGGTGCTGGGGTT...ACTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CAA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCCAGATCCACATGCCCTaGGGAATTGTTTTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPQIHMP*GIVFRG
Trigger: GCCCCTGAAAACAATTCCCAAGGGCATGTGGATCTG...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS GCA 90 bp ACACACGGGAACACGTGTCACACATCAGCAACTGGCCACTTTTTCTaGAAACACTGCAAAAATCCTCATGGATATCACCGTCTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: THGNTCHTSATGHFF*KHCKNPHGYHRLWR
Trigger: CCTCCACAGACGGTGATATCCATGAGGATTTTTGCAGTGTTTGCAGAAAAAGTGGCCAGTTGCTGATGTGTGACACGTGTTCCCGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
ENSMUST00000159961.8
CDS-3UTR CAA 90 bp GGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCTGGATCCTGCTTCATTaGGGCAACCAGTTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: GPSRNVKYCLCHILSHPCWILLH*GNQFLV
Trigger: CACCAGAAACTGGTTGCCCAAATGAAGCAGGATCCA...GCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTTGACTATCAGGTTCTaGCGCAGCTGCTCAACTACT +
Preference number: 5 (lower is better)
Translates to: HGAGKEPPAGTISCNMVQLTIRF*RSCSTT
Trigger: AGTAGTTGAGCAGCTGCGCAAGAACCTGATAGTCAA...CTGGACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTTCCGGCTGCTCTTGTTaGACTATCAGGTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPASGCSC*TIRFLR
Trigger: GCGCAAGAACCTGATAGTCAAACAAGAGCAGCCGGA...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGTCCGGCTGCTCTTGTTaGACTATCAGGTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQSGCSC*TIRFLR
Trigger: GCGCAAGAACCTGATAGTCAAACAAGAGCAGCCGGA...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ACACAGAATAACAAGAATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATGTTGTGGGTGTAAACTaGGTCAGCATGACAGGCCTC +
Preference number: 5 (lower is better)
Translates to: TQNNKNQLANSGATWHKHVVGVN*VSMTGL
Trigger: GAGGCCTGTCATGCTGACCAAGTTTACACCCACAAC...ATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCGCCATGGGGAACGTTTaGGCTATGGTTGCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALAMGNV*AMVAVC
Trigger: ACAGACTGCAACCATAGCCAAAACGTTCCCCATGGC...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ACTCTGTACTTTCCAGAAGAAATCCGGCTTTGCTCTTCTAGCGTCTCCTCGCCACACTGTACACCGGGTTaGCTGTTGTTCTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: TLYFPEEIRLCSSSVSSPHCTPG*LLFFSF
Trigger: GAAAGAGAAGAACAACAGCAAACCCGGTGTACAGTG...TGGCGAGGAGACGCTAGAAGAGCAAAGCCGGATTTCTTCTGGAAAGTACAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TACTCTATCATGCAAGGTCTCCGCTACCCTCAACAGGACCGTCAGCCTGAAAAACACTGTACACCGGGTTaGCTGTTGTTCTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: YSIMQGLRYPQQDRQPEKHCTPG*LLFFSF
Trigger: GAAAGAGAAGAACAACAGCAAACCCGGTGTACAGTG...TTTTTCAGGCTGACGGTCCTGTTGAGGGTAGCGGAGACCTTGCATGATAGAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GGTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGACACTGTACACCGGGTTaGCTGTTGTTCTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: GATWHKHLLSLWNQRTKRHCTPG*LLFFSF
Trigger: GAAAGAGAAGAACAACAGCAAACCCGGTGTACAGTG...TCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTACATGCCCTTGGGAATaGTTTTCAGGGGCGGCTCTA +
Preference number: 5 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPATCPWE*FSGAAL
Trigger: TAGAGCCGCCCCTGAAAACAATTCCCAAGGGCATGT...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGACATGCCCTTGGGAATaGTTTTCAGGGGCGGCTCTA +
Preference number: 5 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQTCPWE*FSGAAL
Trigger: TAGAGCCGCCCCTGAAAACAATTCCCAAGGGCATGT...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGCAGATCCACATGCCCTaGGGAATTGTTTTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQQIHMP*GIVFRG
Trigger: GCCCCTGAAAACAATTCCCAAGGGCATGTGGATCTG...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AAAAGGGTTGTCTCCATTCACACACACCTGGGTCGTGCTGCTCTGCTTAGAACCTTCCAGGCCAAGGAATaGCTTCTTCCTTCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: KRVVSIHTHLGRAALLRTFQAKE*LLPSLA
Trigger: TGCTAAAGAAGGAAGAAGCAATTCCTTGGCCTGGAA...GGTTCTAAGCAGAGCAGCACGACCCAGGTGTGTGTGAATGGAGACAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTGAACTGCTGAGCTCTTaGACCTTCTGCTCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: YVTWHGAGKEPPAGTISCELLSS*TFCSSC
Trigger: ACAACTGGAGCAGAAGGTCAAAGAGCTCAGCAGTTC...ACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCGAACTGCTGAGCTCTTaGACCTTCTGCTCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: GPSRNVKYCLCHILSHPCELLSS*TFCSSC
Trigger: ACAACTGGAGCAGAAGGTCAAAGAGCTCAGCAGTTC...GCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAACTCTGTATGGGCTGAGGAGGTGTaGCTTGAACCTGTGATGCAG +
Preference number: 5 (lower is better)
Translates to: LAQASSLSLEPKNQKNSVWAEEV*LEPVMQ
Trigger: CTGCATCACAGGTTCAAGCAACACCTCCTCAGCCCA...TACAGAGTTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068702.14
ENSMUST00000111292.8
CDS-3UTR CAA 90 bp GCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCCCATGGATATCACCCTTaGGCCAGTGTTCCTCATTGG +
Preference number: 5 (lower is better)
Translates to: APPGTLNTAYVIYFPTLAHGYHP*ASVPHW
Trigger: CCAATGAGGAACACTGGCCAAAGGGTGATATCCATG...GGCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068702.14
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCAGGCATGGTCGCAGTaGCTGCTTTCAAGACGAGAG +
Preference number: 5 (lower is better)
Translates to: YIMSLGMVLAKNLQLALFQAWSQ*LLSRRE
Trigger: CTCTCGTCTTGAAAGCAGCAACTGCGACCATGCCTG...AAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTAGACGTCTGGAGGTaGACTGGTGTGTTCTGCACA +
Preference number: 5 (lower is better)
Translates to: GLVFLPKQTAPSKDLKPALDVWR*TGVFCT
Trigger: TGTGCAGAACACACCAGTCAACCTCCAGACGTCTAG...AGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TCGGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTCTGAGGAGGTGTTGCTaGAACCTGCAGAGTGACTGT +
Preference number: 5 (lower is better)
Translates to: SAPPGTLNTAYVIYFPTLLRRCC*NLQSDC
Trigger: ACAGTCACTCTGCAGGTTCAAGCAACACCTCCTCAG...AAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS GCA 90 bp ACACACGGGAACACGTGTCACACATCAGCAACTGGCCACTTTTTCTaGAAACACTGCAAAAATCCTCATGGATATCACCCTTTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: THGNTCHTSATGHFF*KHCKNPHGYHPLAS
Trigger: ACTGGCCAAAGGGTGATATCCATGAGGATTTTTGCAGTGTTTGCAGAAAAAGTGGCCAGTTGCTGATGTGTGACACGTGTTCCCGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000068702.14
ENSMUST00000111292.8
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000161067.2
CDS-3UTR CAA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGTGGATCCTGCTTCATTaGGGCAACCAGTTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQWILLH*GNQFLV
Trigger: CACCAGAAACTGGTTGCCCAAATGAAGCAGGATCCA...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCCTTGTCCGGCTGCTCTaGTTTGACTATCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: GPSRNVKYCLCHILSHPCLVRLL*FDYQVL
Trigger: AAGAACCTGATAGTCAAACAAGAGCAGCCGGACAAG...GCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAACTTGTCCGGCTGCTCTaGTTTGACTATCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: VPPGTSIFSLSGTKEPKELVRLL*FDYQVL
Trigger: AAGAACCTGATAGTCAAACAAGAGCAGCCGGACAAG...TTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TGGGAACGCCCTGACACTATGCACATTCCATTTTGGCTTCAAACAGGAGATGAGCTTGTCCGGCTGCTCTaGTTTGACTATCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: WERPDTMHIPFWLQTGDELVRLL*FDYQVL
Trigger: AAGAACCTGATAGTCAAACAAGAGCAGCCGGACAAG...CTCATCTCCTGTTTGAAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTGTTGTGGGTGTAAACTaGGTCAGCATGACAGGCCTC +
Preference number: 5 (lower is better)
Translates to: IYYVTWHGAGKEPPAGTIVVGVN*VSMTGL
Trigger: GAGGCCTGTCATGCTGACCAAGTTTACACCCACAAC...AATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TCGGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGGTTCTCTTCTCGTTTaGGTTTTGGTGCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SAPPGTLNTAYVIYFPTLGSLLV*VLVQQV
Trigger: CACCTGCTGCACCAAAACCAAAACGAGAAGAGAACC...AAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111293.9
ENSMUST00000111294.8
CDS-3UTR CAA 90 bp CTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAACTCTGTAGCACCGCATTGTATTTaGGAGGACGACCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LAQASSLSLEPKNQKNSVAPHCI*EDDLSS
Trigger: GGAAGAGAGGTCGTCCTCCAAAATACAATGCGGTGC...TACAGAGTTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CAA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCCAGATCCACATGCCCTaGGGAATTGTTTTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: RESNILCHLAWCWQRTSSQIHMP*GIVFRG
Trigger: GCCCCTGAAAACAATTCCCAAGGGCATGTGGATCTG...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTAACATGGTCTTCCAGGCCAAGGAATaGCTTCTTCCTTCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: WHGAGKEPPAGTISCNMVFQAKE*LLPSLA
Trigger: TGCTAAAGAAGGAAGAAGCAATTCCTTGGCCTGGAA...GACCATGTTACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGGAACTGCTGAGCTCTTaGACCTTCTGCTCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQELLSS*TFCSSC
Trigger: ACAACTGGAGCAGAAGGTCAAAGAGCTCAGCAGTTC...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS GCA 90 bp TTGTTTTCAGACTGTGACAATGGCTGTATCTGGAACTTGTCCGGCTaGTCTTGTTTGACTATCAGGTTCTTGCGCAGCTGCTCAACTACT +
Preference number: 5 (lower is better)
Translates to: LFSDCDNGCIWNLSG*SCLTIRFLRSCSTT
Trigger: AGTAGTTGAGCAGCTGCGCAAGAACCTGATAGTCAAACAAGAGCAGCCGGACAAGTTCCAGATACAGCCATTGTCACAGTCTGAAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159366.8
ENSMUST00000159961.8
CDS-3UTR CAA 90 bp CTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAACCTGCTCTCTTGACTATCAGGTTCTaGCGCAGCTGCTCAACTACT +
Preference number: 5 (lower is better)
Translates to: LVFLPKQTAPSKDLKPALLTIRF*RSCSTT
Trigger: AGTAGTTGAGCAGCTGCGCAAGAACCTGATAGTCAA...GAGAGCAGGTTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAATCCGGCTGCTCTTGTTaGACTATCAGGTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKSGCSC*TIRFLR
Trigger: GCGCAAGAACCTGATAGTCAAACAAGAGCAGCCGGA...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ACACAGAATAACAAGAATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCTTGTCCGGCTGCTCTaGTTTGACTATCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: TQNNKNQLANSGATWHKHLVRLL*FDYQVL
Trigger: AAGAACCTGATAGTCAAACAAGAGCAGCCGGACAAG...ATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGCTTGTCCGGCTGCTCTaGTTTGACTATCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQLVRLL*FDYQVL
Trigger: AAGAACCTGATAGTCAAACAAGAGCAGCCGGACAAG...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATGTTGTGGGTGTAAACTaGGTCAGCATGACAGGCCTC +
Preference number: 5 (lower is better)
Translates to: QLALFHVTWSSLCMYTQNVVGVN*VSMTGL
Trigger: GAGGCCTGTCATGCTGACCAAGTTTACACCCACAAC...ATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAAGTTGTGGGTGTAAACTaGGTCAGCATGACAGGCCTC +
Preference number: 5 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKVVGVN*VSMTGL
Trigger: GAGGCCTGTCATGCTGACCAAGTTTACACCCACAAC...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TGGGAACGCCCTGACACTATGCACATTCCATTTTGGCTTCAAACAGGAGATGAGACACCGGGTTTGCTGTaGTTCTTCTCTTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: WERPDTMHIPFWLQTGDETPGLL*FFSFFP
Trigger: AGGAAAGAAAGAGAAGAACAACAGCAAACCCGGTGT...CTCATCTCCTGTTTGAAGCCAAAATGGAATGTGCATAGTGTCAGGGCGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ACACAGAATAACAAGAATCAATTGGCAAACTCGGGTGCCACCTGGCACAAGCATCACTGTACACCGGGTTaGCTGTTGTTCTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: TQNNKNQLANSGATWHKHHCTPG*LLFFSF
Trigger: GAAAGAGAAGAACAACAGCAAACCCGGTGTACAGTG...ATGCTTGTGCCAGGTGGCACCCGAGTTTGCCAATTGATTCTTGTTATTCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAAAACCCCAGCACCGCATaGTATTTTGGAGGACGACCT +
Preference number: 5 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKNPSTA*YFGGRP
Trigger: AGGTCGTCCTCCAAAATACAATGCGGTGCTGGGGTT...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CAA 90 bp CAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATAACCCCAGCACCGCATaGTATTTTGGAGGACGACCT +
Preference number: 5 (lower is better)
Translates to: QLALFHVTWSSLCMYTQNNPSTA*YFGGRP
Trigger: AGGTCGTCCTCCAAAATACAATGCGGTGCTGGGGTT...ATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111293.9
CDS-3UTR CAA 90 bp TGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTAACATGCCCTTGGGAATaGTTTTCAGGGGCGGCTCTA +
Preference number: 5 (lower is better)
Translates to: CGGCCRHTLVYNRESNILTCPWE*FSGAAL
Trigger: TAGAGCCGCCCCTGAAAACAATTCCCAAGGGCATGT...TAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTTCATGTTTCCAGGCCAAGGAATaGCTTCTTCCTTCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: YVTWHGAGKEPPAGTISCFQAKE*LLPSLA
Trigger: TGCTAAAGAAGGAAGAAGCAATTCCTTGGCCTGGAA...ACATGAAATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCTTCCAGGCCAAGGAATaGCTTCTTCCTTCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPFQAKE*LLPSLA
Trigger: TGCTAAAGAAGGAAGAAGCAATTCCTTGGCCTGGAA...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGCCGTTTCTCCTCTTCTTTaGCTGCTTTGTAGGCGATGT +
Preference number: 5 (lower is better)
Translates to: APPGTLNTAYVIYFPTLAVSPLL*LLCRRC
Trigger: ACATCGCCTACAAAGCAGCAAAAGAAGAGGAGAAAC...GGCAAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCGTTTCTCCTCTTCTTTaGCTGCTTTGTAGGCGATGT +
Preference number: 5 (lower is better)
Translates to: RKAHTLFGLVFLPKQTAPVSPLL*LLCRRC
Trigger: ACATCGCCTACAAAGCAGCAAAAGAAGAGGAGAAAC...GGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GTGCCACCTGGCACAAGCATCTTCTCTCTCTCTGGAACCAAAGAACCAAAAGAAGTTTCTCCTCTTCTTTaGCTGCTTTGTAGGCGATGT +
Preference number: 5 (lower is better)
Translates to: VPPGTSIFSLSGTKEPKEVSPLL*LLCRRC
Trigger: ACATCGCCTACAAAGCAGCAAAAGAAGAGGAGAAAC...TTCTTTTGGTTCTTTGGTTCCAGAGAGAGAGAAGATGCTTGTGCCAGGTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp ATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCTGGCACTATTCATGGATATCACCCTTaGGCCAGTGTTCCTCATTGG +
Preference number: 5 (lower is better)
Translates to: IYYVTWHGAGKEPPAGTIHGYHP*ASVPHW
Trigger: CCAATGAGGAACACTGGCCAAAGGGTGATATCCATG...AATAGTGCCAGCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000068702.14
ENSMUST00000111292.8
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS CCA 90 bp GCTTCTGTTTCTCCTCTGCTTTGTAGGCGATGTAGGAATGAACAATaGCTAAGGTTCCAGGCCAAGGAATTGCTTCTTCCTTCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: ASVSPLLCRRCRNEQ*LRFQAKELLLPSLA
Trigger: TGCTAAAGAAGGAAGAAGCAATTCCTTGGCCTGGAACCTTAGCCATTGTTCATTCCTACATCGCCTACAAAGCAGAGGAGAAACAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161067.2
CDS-3UTR CAA 90 bp GCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATAACAAGTGGGCTGAGGAGGTGTaGCTTGAACCTGCTGTGATG +
Preference number: 5 (lower is better)
Translates to: ALFHVTWSSLCMYTQNNKWAEEV*LEPAVM
Trigger: CATCACAGCAGGTTCAAGCAACACCTCCTCAGCCCA...CTTGTTATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044036.15
ENSMUST00000111291.9
CDS-3UTR CAA 90 bp CTCCAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGACACCGGGTTTGCTGTaGTTCTTCTCTTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LQLALFHVTWSSLCMYTQTPGLL*FFSFFP
Trigger: AGGAAAGAAAGAGAAGAACAACAGCAAACCCGGTGT...CTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTAACATGCCCTTGGGAATaGTTTTCAGGGGCGGCTCTA +
Preference number: 5 (lower is better)
Translates to: KSLGTGKPTHSLDLSFYLTCPWE*FSGAAL
Trigger: TAGAGCCGCCCCTGAAAACAATTCCCAAGGGCATGT...TAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TCGGCCCCTCCAGGAACGTTAAATACTGCTTATGTCATATACTTTCCCACCCTTGTTTCTCCTCTTCTTTaGCTGCTTTGTAGGCGATGT +
Preference number: 5 (lower is better)
Translates to: SAPPGTLNTAYVIYFPTLVSPLL*LLCRRC
Trigger: ACATCGCCTACAAAGCAGCAAAAGAAGAGGAGAAAC...AAGGGTGGGAAAGTATATGACATAAGCAGTATTTAACGTTCCTGGAGGGGCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTAGAACTGCTGAGCTCTTaGACCTTCTGCTCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: CGGCCRHTLVYNRESNILELLSS*TFCSSC
Trigger: ACAACTGGAGCAGAAGGTCAAAGAGCTCAGCAGTTC...TAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TTTACTTCACTCCAGTTGACTCAAAGCAACTCATTTCCAAACATCAGAAGATGGCAGGCATGGTCGCAGTaGCTGCTTTCAAGACGAGAG +
Preference number: 5 (lower is better)
Translates to: FTSLQLTQSNSFPNIRRWQAWSQ*LLSRRE
Trigger: CTCTCGTCTTGAAAGCAGCAACTGCGACCATGCCTG...CCATCTTCTGATGTTTGGAAATGAGTTGCTTTGAGTCAACTGGAGTGAAGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp GCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATAACAAGCAGGCATGGTCGCAGTaGCTGCTTTCAAGACGAGAG +
Preference number: 5 (lower is better)
Translates to: ALFHVTWSSLCMYTQNNKQAWSQ*LLSRRE
Trigger: CTCTCGTCTTGAAAGCAGCAACTGCGACCATGCCTG...CTTGTTATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CTCTTTGGACTTGTCTTTCTACCTAAACAAACGGCTCCCAGTAAGGATCTGAAATTGACTATCAGGTTCTaGCGCAGCTGCTCAACTACT +
Preference number: 5 (lower is better)
Translates to: LFGLVFLPKQTAPSKDLKLTIRF*RSCSTT
Trigger: AGTAGTTGAGCAGCTGCGCAAGAACCTGATAGTCAA...TTTCAGATCCTTACTGGGAGCCGTTTGTTTAGGTAGAAAGACAAGTCCAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TTTACTTCACTCCAGTTGACTCAAAGCAACTCATTTCCAAACATCAGAAGATGGGTTGTGGGTGTAAACTaGGTCAGCATGACAGGCCTC +
Preference number: 5 (lower is better)
Translates to: FTSLQLTQSNSFPNIRRWVVGVN*VSMTGL
Trigger: GAGGCCTGTCATGCTGACCAAGTTTACACCCACAAC...CCATCTTCTGATGTTTGGAAATGAGTTGCTTTGAGTCAACTGGAGTGAAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATCACTGTACACCGGGTTaGCTGTTGTTCTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: QLALFHVTWSSLCMYTQNHCTPG*LLFFSF
Trigger: GAAAGAGAAGAACAACAGCAAACCCGGTGTACAGTG...ATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTACACTGTACACCGGGTTaGCTGTTGTTCTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: CGGCCRHTLVYNRESNILHCTPG*LLFFSF
Trigger: GAAAGAGAAGAACAACAGCAAACCCGGTGTACAGTG...TAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AGAGAGAGTAATATATTATGTCACTTGGCATGGTGCTGGCAAAGAACCTCCAGCGTTTCTCCTCTTCTTTaGCTGCTTTGTAGGCGATGT +
Preference number: 5 (lower is better)
Translates to: RESNILCHLAWCWQRTSSVSPLL*LLCRRC
Trigger: ACATCGCCTACAAAGCAGCAAAAGAAGAGGAGAAAC...GCTGGAGGTTCTTTGCCAGCACCATGCCAAGTGACATAATATATTACTCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTATGTCACTTGTGGATCCTGCTTCATTaGGGCAACCAGTTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: CCRHTLVYNRESNILCHLWILLH*GNQFLV
Trigger: CACCAGAAACTGGTTGCCCAAATGAAGCAGGATCCA...CAAGTGACATAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp AAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGTCTTTCTACCTATTGACTATCAGGTTCTaGCGCAGCTGCTCAACTACT +
Preference number: 5 (lower is better)
Translates to: KSLGTGKPTHSLDLSFYLLTIRF*RSCSTT
Trigger: AGTAGTTGAGCAGCTGCGCAAGAACCTGATAGTCAA...TAGGTAGAAAGACAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGTTGACTATCAGGTTCTaGCGCAGCTGCTCAACTACT +
Preference number: 5 (lower is better)
Translates to: FMVVKSLGTGKPTHSLDLLTIRF*RSCSTT
Trigger: AGTAGTTGAGCAGCTGCGCAAGAACCTGATAGTCAA...CAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATACACCGGGTTTGCTGTaGTTCTTCTCTTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: QLALFHVTWSSLCMYTQNTPGLL*FFSFFP
Trigger: AGGAAAGAAAGAGAAGAACAACAGCAAACCCGGTGT...ATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TGTGGAGGCTGCTGCAGGCACACACTGGTGTATAATAGAGAGAGTAATATATTAACACCGGGTTTGCTGTaGTTCTTCTCTTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: CGGCCRHTLVYNRESNILTPGLL*FFSFFP
Trigger: AGGAAAGAAAGAGAAGAACAACAGCAAACCCGGTGT...TAATATATTACTCTCTCTATTATACACCAGTGTGTGCCTGCAGCAGCCTCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp CAGCTGGCACTATTTCATGTAACATGGTCCAGTCTTTGCATGTACACACAGAATGTTTCTCCTCTTCTTTaGCTGCTTTGTAGGCGATGT +
Preference number: 5 (lower is better)
Translates to: QLALFHVTWSSLCMYTQNVSPLL*LLCRRC
Trigger: ACATCGCCTACAAAGCAGCAAAAGAAGAGGAGAAAC...ATTCTGTGTGTACATGCAAAGACTGGACCATGTTACATGAAATAGTGCCAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TTTACTTCACTCCAGTTGACTCAAAGCAACTCATTTCCAAACATCAGAAGATGGGAACTGCTGAGCTCTTaGACCTTCTGCTCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: FTSLQLTQSNSFPNIRRWELLSS*TFCSSC
Trigger: ACAACTGGAGCAGAAGGTCAAAGAGCTCAGCAGTTC...CCATCTTCTGATGTTTGGAAATGAGTTGCTTTGAGTCAACTGGAGTGAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS-3UTR CAA 90 bp TTTATGGTAGTGAAAAGTTTAGGAACAGGAAAGCCCACACACTCTTTGGACTTGACACCGGGTTTGCTGTaGTTCTTCTCTTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: FMVVKSLGTGKPTHSLDLTPGLL*FFSFFP
Trigger: AGGAAAGAAAGAGAAGAACAACAGCAAACCCGGTGT...CAAGTCCAAAGAGTGTGTGGGCTTTCCTGTTCCTAAACTTTTCACTACCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
CDS TCA 90 bp CTTTTCTGTTTCTCACTCAAAGCTGTGATTTTGGCTTGGAGTTCATaGAGCTGTTTCTTTAAGTCAGCATTCTGTGGATCCTGCTTCATT +
Preference number: 5 (lower is better)
Translates to: LFCFSLKAVILAWSS*SCFFKSAFCGSCFI
Trigger: AATGAAGCAGGATCCACAGAATGCTGACTTAAAGAAACAGCTTCATGAACTCCAAGCCAAAATCACAGCTTTGAGTGAGAAACAGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159366.8
CDS CAA 90 bp GCGGGTGTGGAGGCGGCGTTGGCAGGGGGAGTGCAGTCTGGGCCATaGGAGAGGGCCCCCGCCGTGGCCTCTGAGTCCACAGGTCTGCAG +
Preference number: 6 (lower is better)
Translates to: AGVEAALAGGVQSGP*ERAPAVASESTGLQ
Trigger: CTGCAGACCTGTGGACTCAGAGGCCACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCACTCCCCCTGCCAACGCCGCCTCCACACCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS CCA 72 bp GAGTGCAGTCTGGGCCATTGGAGAGGGCCCCCGCCGTaGCCTCTGAGTCCACAGGTCTGCAGAGGTCGACGC +
Preference number: 6 (lower is better)
Translates to: ECSLGHWRGPPP*PLSPQVCRGRR
Trigger: GCGTCGACCTCTGCAGACCTGTGGACTCAGAGGCCACGGCGGGGGCCCTCTCCAATGGCCCAGACTGCACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS CAA 72 bp TCGACGCCATGCACAAGGCGGATGAGCCGCTTCACCTaGTCCAGGGAGCTGCGCATCTCCTTCTGCCGCGCC +
Preference number: 6 (lower is better)
Translates to: STPCTRRMSRFT*SRELRISFCRA
Trigger: GGCGCGGCAGAAGGAGATGCGCAGCTCCCTGGACAAGGTGAAGCGGCTCATCCGCCTTGTGCATGGCGTCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS CAA 90 bp CTGCAGAGGTCGACGCCATGCACAAGGCGGATGAGCCGCTTCACCTaGTCCAGGGAGCTGCGCATCTCCTTCTGCCGCGCCAGGATGCTG +
Preference number: 6 (lower is better)
Translates to: LQRSTPCTRRMSRFT*SRELRISFCRARML
Trigger: CAGCATCCTGGCGCGGCAGAAGGAGATGCGCAGCTCCCTGGACAAGGTGAAGCGGCTCATCCGCCTTGTGCATGGCGTCGACCTCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS TCA 72 bp CAGGTCTGCAGAGGTCGACGCCATGCACAAGGCGGATaGGCCGCTTCACCTTGTCCAGGGAGCTGCGCATCT +
Preference number: 6 (lower is better)
Translates to: QVCRGRRHAQGG*AASPCPGSCAS
Trigger: AGATGCGCAGCTCCCTGGACAAGGTGAAGCGGCTCATCCGCCTTGTGCATGGCGTCGACCTCTGCAGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS CAA 90 bp ACAGCCTCTGCCCCAGGCCCAGTGACCTTACTAGACGTCTGGAGGTaGACTGGTGTGTTCTGCACATCAGTGCTGAGCACAGCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: TASAPGPVTLLDVWR*TGVFCTSVLSTAFW
Trigger: CCAGAAGGCTGTGCTCAGCACTGATGTGCAGAACACACCAGTCAACCTCCAGACGTCTAGTAAGGTCACTGGGCCTGGGGCAGAGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159727.2
CDS GCA 72 bp CGCTTCACCTTGTCCAGGGAGCTGCGCATCTCCTTCTaGCGCGCCAGGATGCTGCTCTTCATCTCCATACAT +
Preference number: 6 (lower is better)
Translates to: RFTLSRELRISF*RARMLLFISIH
Trigger: ATGTATGGAGATGAAGAGCAGCATCCTGGCGCGGCAGAAGGAGATGCGCAGCTCCCTGGACAAGGTGAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS CCA 72 bp GCCTCTGCCCCAGGCCCAGTGACCTTACTAGACGTCTaGAGGTTGACTGGTGTGTTCTGCACATCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: ASAPGPVTLLDV*RLTGVFCTSVL
Trigger: CAGCACTGATGTGCAGAACACACCAGTCAACCTCCAGACGTCTAGTAAGGTCACTGGGCCTGGGGCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159727.2
CDS CCA 72 bp ATGGGAGGAGGCGCTGGAGCGATAGGAATGTTATTCTaGGCCACAGGCTTGGGTCGAACCTGTGGAAGGAAG +
Preference number: 6 (lower is better)
Translates to: MGGGAGAIGMLF*ATGLGRTCGRK
Trigger: CTTCCTTCCACAGGTTCGACCCAAGCCTGTGGCCCAGAATAACATTCCTATCGCTCCAGCGCCTCCTCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159727.2
ENSMUST00000159961.8
CDS CCA 72 bp CTGTTGATGGCGGTCACCATAGCAATGGTAGGTCTCTaGCCCACAACAGAGGCAGGCATGGTCGCAGTTGCT +
Preference number: 6 (lower is better)
Translates to: LLMAVTIAMVGL*PTTEAGMVAVA
Trigger: AGCAACTGCGACCATGCCTGCCTCTGTTGTGGGCCAGAGACCTACCATTGCTATGGTGACCGCCATCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159366.8
ENSMUST00000159727.2
CDS GCA 72 bp GGTGAGCTGGGCCATGGGGAACGTTTTGGCTATGGTTaGAGTCTGTCCATTGACAACACGGACAGGGTGGAT +
Preference number: 6 (lower is better)
Translates to: GELGHGERFGYG*SLSIDNTDRVD
Trigger: ATCCACCCTGTCCGTGTTGTCAATGGACAGACTGCAACCATAGCCAAAACGTTCCCCATGGCCCAGCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS CCA 72 bp CTGGTCCCTGGAGTAGCTATGACAATGCTGGTGAGCTaGGCCATGGGGAACGTTTTGGCTATGGTTGCAGTC +
Preference number: 6 (lower is better)
Translates to: LVPGVAMTMLVS*AMGNVLAMVAV
Trigger: GACTGCAACCATAGCCAAAACGTTCCCCATGGCCCAGCTCACCAGCATTGTCATAGCTACTCCAGGGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS CAA 72 bp GTCTCTGGCCCACAACAGAGGCAGGCATGGTCGCAGTaGCTGCTTTCAAGACGAGAGGTAGTGTCTTTGTGG +
Preference number: 6 (lower is better)
Translates to: VSGPQQRQAWSQ*LLSRREVVSLW
Trigger: CCACAAAGACACTACCTCTCGTCTTGAAAGCAGCAACTGCGACCATGCCTGCCTCTGTTGTGGGCCAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159366.8
ENSMUST00000159727.2
CDS CAA 90 bp GGAGTAGCTATGACAATGCTGGTGAGCTGGGCCATGGGGAACGTTTaGGCTATGGTTGCAGTCTGTCCATTGACAACACGGACAGGGTGG +
Preference number: 6 (lower is better)
Translates to: GVAMTMLVSWAMGNV*AMVAVCPLTTRTGW
Trigger: CCACCCTGTCCGTGTTGTCAATGGACAGACTGCAACCATAGCCAAAACGTTCCCCATGGCCCAGCTCACCAGCATTGTCATAGCTACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS CAA 90 bp ACTGGTGTGTTCTGCACATCAGTGCTGAGCACAGCCTTCTGGCTGTaGATGGCGGTCACCATAGCAATGGTAGGTCTCTGGCCCACAACA +
Preference number: 6 (lower is better)
Translates to: TGVFCTSVLSTAFWL*MAVTIAMVGLWPTT
Trigger: TGTTGTGGGCCAGAGACCTACCATTGCTATGGTGACCGCCATCAACAGCCAGAAGGCTGTGCTCAGCACTGATGTGCAGAACACACCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159366.8
ENSMUST00000159727.2
CDS CCA 72 bp GGTGTGTTCTGCACATCAGTGCTGAGCACAGCCTTCTaGCTGTTGATGGCGGTCACCATAGCAATGGTAGGT +
Preference number: 6 (lower is better)
Translates to: GVFCTSVLSTAF*LLMAVTIAMVG
Trigger: ACCTACCATTGCTATGGTGACCGCCATCAACAGCCAGAAGGCTGTGCTCAGCACTGATGTGCAGAACACACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159366.8
ENSMUST00000159727.2
CDS CCA 72 bp AGGCCCAGTGACCTTACTAGACGTCTGGAGGTTGACTaGTGTGTTCTGCACATCAGTGCTGAGCACAGCCTT +
Preference number: 6 (lower is better)
Translates to: RPSDLTRRLEVD*CVLHISAEHSL
Trigger: AAGGCTGTGCTCAGCACTGATGTGCAGAACACACCAGTCAACCTCCAGACGTCTAGTAAGGTCACTGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159727.2
CDS CAA 72 bp TTCTGCACATCAGTGCTGAGCACAGCCTTCTGGCTGTaGATGGCGGTCACCATAGCAATGGTAGGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: FCTSVLSTAFWL*MAVTIAMVGLW
Trigger: CCAGAGACCTACCATTGCTATGGTGACCGCCATCAACAGCCAGAAGGCTGTGCTCAGCACTGATGTGCAGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159366.8
ENSMUST00000159727.2
CDS TCA 72 bp TGTTTCTCCAGGCTTGGTTTGCTAAGCTGTACAGTCTaGGGTCCAGGGAGTCTGGTCCCTGGAGTAGCTATG +
Preference number: 6 (lower is better)
Translates to: CFSRLGLLSCTV*GPGSLVPGVAM
Trigger: CATAGCTACTCCAGGGACCAGACTCCCTGGACCTCAGACTGTACAGCTTAGCAAACCAAGCCTGGAGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
ENSMUST00000161067.2
CDS GCA 72 bp CGTCCCAGGATGCATTGTGCTGTTAAGGTAAGTGACTaGACTCTTCTTACGCTCTGGCTCAAAGACAGCCCC +
Preference number: 6 (lower is better)
Translates to: RPRMHCAVKVSD*TLLTLWLKDSP
Trigger: GGGGCTGTCTTTGAGCCAGAGCGTAAGAAGAGTGCAGTCACTTACCTTAACAGCACAATGCATCCTGGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
ENSMUST00000161067.2
CDS GCA 72 bp TTAGCATCTGGTCCTGACATCTGGGACAGATCCACATaGCCTTGGGAATTGTTTTCAGGGGCGGCTCTAAGC +
Preference number: 6 (lower is better)
Translates to: LASGPDIWDRST*PWELFSGAALS
Trigger: GCTTAGAGCCGCCCCTGAAAACAATTCCCAAGGGCATGTGGATCTGTCCCAGATGTCAGGACCAGATGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
ENSMUST00000161067.2
CDS CCA 72 bp TGTCCATTGACAACACGGACAGGGTGGATGGAATTCTaGGATGTGGGGAGGGTTGTGGGTGTAAACTTGGTC +
Preference number: 6 (lower is better)
Translates to: CPLTTRTGWMEF*DVGRVVGVNLV
Trigger: GACCAAGTTTACACCCACAACCCTCCCCACATCCCAGAATTCCATCCACCCTGTCCGTGTTGTCAATGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159727.2
ENSMUST00000159961.8
CDS CCA 72 bp GCTGTTAAGGTAAGTGACTGCACTCTTCTTACGCTCTaGCTCAAAGACAGCCCCACTGTACACCGGGTTTGC +
Preference number: 6 (lower is better)
Translates to: AVKVSDCTLLTL*LKDSPTVHRVC
Trigger: GCAAACCCGGTGTACAGTGGGGCTGTCTTTGAGCCAGAGCGTAAGAAGAGTGCAGTCACTTACCTTAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
ENSMUST00000161067.2
CDS CAA 72 bp ATGACAATGCTGGTGAGCTGGGCCATGGGGAACGTTTaGGCTATGGTTGCAGTCTGTCCATTGACAACACGG +
Preference number: 6 (lower is better)
Translates to: MTMLVSWAMGNV*AMVAVCPLTTR
Trigger: CCGTGTTGTCAATGGACAGACTGCAACCATAGCCAAAACGTTCCCCATGGCCCAGCTCACCAGCATTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS TCA 72 bp TGGGGAACGTTTTGGCTATGGTTGCAGTCTGTCCATTaGCAACACGGACAGGGTGGATGGAATTCTGGGATG +
Preference number: 6 (lower is better)
Translates to: WGTFWLWLQSVH*QHGQGGWNSGM
Trigger: CATCCCAGAATTCCATCCACCCTGTCCGTGTTGTCAATGGACAGACTGCAACCATAGCCAAAACGTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS GCA 72 bp GACTGTGACAATGGCTGTATCTGGAACTTGTCCGGCTaGTCTTGTTTGACTATCAGGTTCTTGCGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: DCDNGCIWNLSG*SCLTIRFLRSC
Trigger: GCAGCTGCGCAAGAACCTGATAGTCAAACAAGAGCAGCCGGACAAGTTCCAGATACAGCCATTGTCACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159366.8
ENSMUST00000159961.8
CDS CCA 72 bp TTCTGGGTGGGATTTAACTGTCTGTTTCTCCAGGCTTaGTTTGCTAAGCTGTACAGTCTGAGGTCCAGGGAG +
Preference number: 6 (lower is better)
Translates to: FWVGFNCLFLQA*FAKLYSLRSRE
Trigger: CTCCCTGGACCTCAGACTGTACAGCTTAGCAAACCAAGCCTGGAGAAACAGACAGTTAAATCCCACCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000159961.8
ENSMUST00000161067.2
CDS CAA 72 bp AATGGCTGTATCTGGAACTTGTCCGGCTGCTCTTGTTaGACTATCAGGTTCTTGCGCAGCTGCTCAACTACT +
Preference number: 6 (lower is better)
Translates to: NGCIWNLSGCSC*TIRFLRSCSTT
Trigger: AGTAGTTGAGCAGCTGCGCAAGAACCTGATAGTCAAACAAGAGCAGCCGGACAAGTTCCAGATACAGCCATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159366.8
ENSMUST00000159961.8
CDS CAA 90 bp GACTGTGACAATGGCTGTATCTGGAACTTGTCCGGCTGCTCTTGTTaGACTATCAGGTTCTTGCGCAGCTGCTCAACTACTCTTTTCTGT +
Preference number: 6 (lower is better)
Translates to: DCDNGCIWNLSGCSC*TIRFLRSCSTTLFC
Trigger: ACAGAAAAGAGTAGTTGAGCAGCTGCGCAAGAACCTGATAGTCAAACAAGAGCAGCCGGACAAGTTCCAGATACAGCCATTGTCACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159366.8
ENSMUST00000159961.8
CDS CCA 72 bp TCTCCTCTGCTTTGTAGGCGATGTAGGAATGAACAATaGCTAAGGTTCCAGGCCAAGGAATTGCTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: SPLLCRRCRNEQ*LRFQAKELLLP
Trigger: AGGAAGAAGCAATTCCTTGGCCTGGAACCTTAGCCATTGTTCATTCCTACATCGCCTACAAAGCAGAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161067.2
CDS TCA 72 bp CTAGATGGTCATGTGTTACCAACCCTAGAGACACCATaGAGGCAAGTTTCTGAGGGTTCTCTTCTCGTTTTG +
Preference number: 6 (lower is better)
Translates to: LDGHVLPTLETP*RQVSEGSLLVL
Trigger: CAAAACGAGAAGAGAACCCTCAGAAACTTGCCTTCATGGTGTCTCTAGGGTTGGTAACACATGACCATCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000159961.8
ENSMUST00000161067.2
CDS GCA 72 bp TGGTCATGTGTTACCAACCTCTGCTTGTTTTTCCTCTaGTTCTGGGTGGGATTTAACTGTTTCTCCAGGCTT +
Preference number: 6 (lower is better)
Translates to: WSCVTNLCLFFL*FWVGFNCFSRL
Trigger: AAGCCTGGAGAAACAGTTAAATCCCACCCAGAAGCAGAGGAAAAACAAGCAGAGGTTGGTAACACATGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111290.10
ENSMUST00000111297.10
CDS CCA 72 bp TTGCTTCTTCCTTCTTTAGCATCTGGTCCTGACATCTaGGACAGATCCACATGCCCTTGGGAATTGTTTTCA +
Preference number: 6 (lower is better)
Translates to: LLLPSLASGPDI*DRSTCPWELFS
Trigger: TGAAAACAATTCCCAAGGGCATGTGGATCTGTCCCAGATGTCAGGACCAGATGCTAAAGAAGGAAGAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
ENSMUST00000161067.2
CDS CCA 72 bp CTTTTGCTGCTTTGTAGGCGATGTAGGAATGAACAATaGCTAAGGTTCCAGGCCAAGGAATTGCTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: LLLLCRRCRNEQ*LRFQAKELLLP
Trigger: AGGAAGAAGCAATTCCTTGGCCTGGAACCTTAGCCATTGTTCATTCCTACATCGCCTACAAAGCAGCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS CAA 72 bp AACTTGTCCGGCTGCTCTTGTTTGACTATCAGGTTCTaGCGCAGCTGCTCAACTACTCTTTTCTGTTTCTCA +
Preference number: 6 (lower is better)
Translates to: NLSGCSCLTIRF*RSCSTTLFCFS
Trigger: TGAGAAACAGAAAAGAGTAGTTGAGCAGCTGCGCAAGAACCTGATAGTCAAACAAGAGCAGCCGGACAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159366.8
ENSMUST00000159961.8
CDS CAA 72 bp TTGTTTTCAGACTGTGACAATGGCTGTATCTGGAACTaGTCCGGCTGCTCTTGTTTGACTATCAGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: LFSDCDNGCIWN*SGCSCLTIRFL
Trigger: CAAGAACCTGATAGTCAAACAAGAGCAGCCGGACAAGTTCCAGATACAGCCATTGTCACAGTCTGAAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159366.8
ENSMUST00000159961.8
CDS CAA 72 bp ATCTCCATACATTTACTTATAGAACTGCTGAGCTCTTaGACCTTCTGCTCCAGTTGTTCCCGCTCCTGTTTT +
Preference number: 6 (lower is better)
Translates to: ISIHLLIELLSS*TFCSSCSRSCF
Trigger: AAAACAGGAGCGGGAACAACTGGAGCAGAAGGTCAAAGAGCTCAGCAGTTCTATAAGTAAATGTATGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8
CDS CAA 90 bp CTGCTCTTCATCTCCATACATTTACTTATAGAACTGCTGAGCTCTTaGACCTTCTGCTCCAGTTGTTCCCGCTCCTGTTTTAAATCTGAA +
Preference number: 6 (lower is better)
Translates to: LLFISIHLLIELLSS*TFCSSCSRSCFKSE
Trigger: TTCAGATTTAAAACAGGAGCGGGAACAACTGGAGCAGAAGGTCAAAGAGCTCAGCAGTTCTATAAGTAAATGTATGGAGATGAAGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000044036.15
ENSMUST00000068702.14
ENSMUST00000090586.12
ENSMUST00000111290.10
ENSMUST00000111291.9
ENSMUST00000111292.8
ENSMUST00000111293.9
ENSMUST00000111294.8
ENSMUST00000111297.10
ENSMUST00000159961.8