Pregenerated sensors for PHF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038025Ensembl transcript IDs: ENSMUST00000035540.9
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGCTCGCTCGCTCGCTCCACCTGCTCAAGGGACAGATGCTCGCATTaGGGAGAGGTGGCTGGGAGGAGGCGAGGCCCTCCCTGGGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: RSLARSTCSRDRCSH*GEVAGRRRGPPWAR Trigger: CCTGGCCCAGGGAGGGCCTCGCCTCCTCCCAGCCACCTCTCCCCAATGCGAGCATCTGTCCCTTGAGCAGGTGGAGCGAGCGAGCGAGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR GCA 90 bp | GCCATGCTCCGCTCGCTCGCTCGCTCCACCTGCTCAAGGGACAGATaGTCGCATTGGGGAGAGGTGGCTGGGAGGAGGCGAGGCCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: AMLRSLARSTCSRDR*SHWGEVAGRRRGPP Trigger: GGGAGGGCCTCGCCTCCTCCCAGCCACCTCTCCCCAATGCGAGCATCTGTCCCTTGAGCAGGTGGAGCGAGCGAGCGAGCGGAGCATGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR GCA 90 bp | GGGGCTCAGACAAGCGCTGCCGTGCTGGCTCCAGCCCTGTGGCCCTaGTCACCTGTCTGCCCACTCAGGGCAGGGTGCCTTGGCCTAGAA | + |
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Preference number: 1 (lower is better) Translates to: GAQTSAAVLAPALWP*SPVCPLRAGCLGLE Trigger: TTCTAGGCCAAGGCACCCTGCCCTGAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGTCTGAGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR GCA 90 bp | GCCCACACTCATGACGCCACCCAGGGGCTCAGACAAGCGCTGCCGTaGTGGCTCCAGCCCTGTGGCCCTGCTCACCTGTCTGCCCACTCA | + |
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Preference number: 1 (lower is better) Translates to: AHTHDATQGLRQALP*WLQPCGPAHLSAHS Trigger: TGAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGTCTGAGCCCCTGGGTGGCGTCATGAGTGTGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR CCA 90 bp | CACACTCATGACGCCACCCAGGGGCTCAGACAAGCGCTGCCGTGCTaGCTCCAGCCCTGTGGCCCTGCTCACCTGTCTGCCCACTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: HTHDATQGLRQALPC*LQPCGPAHLSAHSG Trigger: CCCTGAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGTCTGAGCCCCTGGGTGGCGTCATGAGTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR CCA 90 bp | CCCACTCAGGGCAGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTaGGGCCCCTCCACGTGGCTTAGCCTGGGTCCCCCGGACCCGAAG | + |
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Preference number: 1 (lower is better) Translates to: PTQGRVPWPRSAVSE*GPSTWLSLGPPDPK Trigger: CTTCGGGTCCGGGGGACCCAGGCTAAGCCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCTGCCCTGAGTGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR GCA 90 bp | CCAGCCTGGGGCCAGCTCGGACTCGGGCTGGTGAGCGTGGCTCACTaGACCTTCCTTGAAGGCCTCATGCTCCTAAGCAGAGCCGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: PAWGQLGLGLVSVAH*TFLEGLMLLSRAAP Trigger: TGGAGCGGCTCTGCTTAGGAGCATGAGGCCTTCAAGGAAGGTGCAGTGAGCCACGCTCACCAGCCCGAGTCCGAGCTGGCCCCAGGCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR GCA 90 bp | AGCGCTGCCGTGCTGGCTCCAGCCCTGTGGCCCTGCTCACCTGTCTaGCCACTCAGGGCAGGGTGCCTTGGCCTAGAAGTGCTGTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: SAAVLAPALWPCSPV*PLRAGCLGLEVLFQ Trigger: CTGAAACAGCACTTCTAGGCCAAGGCACCCTGCCCTGAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR CCA 90 bp | CCCAGCCCCGGGCCCTGGGGATGGCGTCCCTCCAAACAGGTCAAGTaGGAGTGGATAAGGCCTCCGCCAAGCTGCATCTCCTCGTGGACA | + |
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Preference number: 1 (lower is better) Translates to: PSPGPWGWRPSKQVK*EWIRPPPSCISSWT Trigger: TGTCCACGAGGAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGACCTGTTTGGAGGGACGCCATCCCCAGGGCCCGGGGCTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR GCA 90 bp | TCACAACAAGGGACGGCCATGCTCCGCTCGCTCGCTCGCTCCACCTaGTCAAGGGACAGATGCTCGCATTGGGGAGAGGTGGCTGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: SQQGTAMLRSLARST*SRDRCSHWGEVAGR Trigger: CCTCCCAGCCACCTCTCCCCAATGCGAGCATCTGTCCCTTGAGCAGGTGGAGCGAGCGAGCGAGCGGAGCATGGCCGTCCCTTGTTGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR CCA 90 bp | CCTGTGGCCCTGCTCACCTGTCTGCCCACTCAGGGCAGGGTGCCTTaGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: PVALLTCLPTQGRVP*PRSAVSEWGPSTWL Trigger: AAGCCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCTGCCCTGAGTGGGCAGACAGGTGAGCAGGGCCACAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR CCA 90 bp | AAACCCAGCCCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATaGCCCACACTCATGACGCCACCCAGGGGCTCAGACAAGCGCTGC | + |
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Preference number: 1 (lower is better) Translates to: KPSPSVSMGGHHHLR*PTLMTPPRGSDKRC Trigger: GCAGCGCTTGTCTGAGCCCCTGGGTGGCGTCATGAGTGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGGGCTGGGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR CCA 90 bp | TTCTGTGTCCTTTGCCTTGTTTTACGCCTTTGGAGGCTGCCAGCCTaGGGCCAGCTCGGACTCGGGCTGGTGAGCGTGGCTCACTGCACC | + |
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Preference number: 1 (lower is better) Translates to: FCVLCLVLRLWRLPA*GQLGLGLVSVAHCT Trigger: GGTGCAGTGAGCCACGCTCACCAGCCCGAGTCCGAGCTGGCCCCAGGCTGGCAGCCTCCAAAGGCGTAAAACAAGGCAAAGGACACAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR CCA 90 bp | CCCGGGCCCTGGGGATGGCGTCCCTCCAAACAGGTCAAGTGGGAGTaGATAAGGCCTCCGCCAAGCTGCATCTCCTCGTGGACAACACAT | + |
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Preference number: 1 (lower is better) Translates to: PGPWGWRPSKQVKWE*IRPPPSCISSWTTH Trigger: ATGTGTTGTCCACGAGGAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGACCTGTTTGGAGGGACGCCATCCCCAGGGCCCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR TCA 90 bp | TGGGTCCTGACAAGCCCAAATGTCCCTAGGCATTTGGGATGTGTGTaGCACCCATTACCTAGCCTGCTACCTGCCAGCCAGGGAGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: WVLTSPNVPRHLGCV*HPLPSLLPASQGAG Trigger: CCCAGCTCCCTGGCTGGCAGGTAGCAGGCTAGGTAATGGGTGTCACACACATCCCAAATGCCTAGGGACATTTGGGCTTGTCAGGACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR GCA 90 bp | CCCTCCAAACAGGTCAAGTGGGAGTGGATAAGGCCTCCGCCAAGCTaGATCTCCTCGTGGACAACACATCCGGGTAACGGGTGTAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: PSKQVKWEWIRPPPS*ISSWTTHPGNGCRN Trigger: GTTTCTACACCCGTTACCCGGATGTGTTGTCCACGAGGAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGACCTGTTTGGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR TCA 90 bp | AGTGGCTCCTCCAACCCACTAACACACCAACCTAACTGTGGGTCCTaGCAAGCCCAAATGTCCCTAGGCATTTGGGATGTGTGTGACACC | + |
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Preference number: 1 (lower is better) Translates to: SGSSNPLTHQPNCGS*QAQMSLGIWDVCDT Trigger: GGTGTCACACACATCCCAAATGCCTAGGGACATTTGGGCTTGTCAGGACCCACAGTTAGGTTGGTGTGTTAGTGGGTTGGAGGAGCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR CCA 90 bp | GTCAAGTGGGAGTGGATAAGGCCTCCGCCAAGCTGCATCTCCTCGTaGACAACACATCCGGGTAACGGGTGTAGAAACAAACCTCATAAG | + |
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Preference number: 1 (lower is better) Translates to: VKWEWIRPPPSCISS*TTHPGNGCRNKPHK Trigger: CTTATGAGGTTTGTTTCTACACCCGTTACCCGGATGTGTTGTCCACGAGGAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR CCA 90 bp | CACCCAGGGGCTCAGACAAGCGCTGCCGTGCTGGCTCCAGCCCTGTGGCCCTGCTTGGGGAGAGGTGGCTaGGAGGAGGCGAGGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: HPGAQTSAAVLAPALWPCLGRGG*EEARPS Trigger: GGAGGGCCTCGCCTCCTCCCAGCCACCTCTCCCCAA...GCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGTCTGAGCCCCTGGGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR CAA 90 bp | CCGCTCGCTCGCTCGCTCCACCTGCTCAAGGGACAGATGCTCGCATaGGGGAGAGGTGGCTGGGAGGAGGCGAGGCCCTCCCTGGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PLARSLHLLKGQMLA*GRGGWEEARPSLGQ Trigger: CTGGCCCAGGGAGGGCCTCGCCTCCTCCCAGCCACCTCTCCCCAATGCGAGCATCTGTCCCTTGAGCAGGTGGAGCGAGCGAGCGAGCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCTCCAGCCCTGTGGCCCTGCTCACCTGTCTGCCCACTCAGGGCAGGGTGTACGCCTTTGGAGGCTaGCAGCCTGGGGCCAGCTCG | + |
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Preference number: 2 (lower is better) Translates to: AGSSPVALLTCLPTQGRVYAFGG*QPGASS Trigger: CGAGCTGGCCCCAGGCTGGCAGCCTCCAAAGGCGTA...CACCCTGCCCTGAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGAGGCGAGGCCCTCCCTaGGCCAGGCAGCACAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: GRVPWPRSAVSEWGPSTWRRGPP*ARQHSH Trigger: GTGGCTGTGCTGCCTGGCCCAGGGAGGGCCTCGCCT...CCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGTGGAGGCTGCCAGCCTaGGGCCAGCTCGGACTCGGG | + |
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Preference number: 2 (lower is better) Translates to: GRVPWPRSAVSEWGPSTWWRLPA*GQLGLG Trigger: CCCGAGTCCGAGCTGGCCCCAGGCTGGCAGCCTCCA...CCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGACGCGGCTTTCGGGGCGAGTGGGAGGGGCCTCTGTACTGTCCGCTCTGAGCCACGTGGCTTAGCCTaGGTCCCCCGGACCCGAAGA | + |
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Preference number: 2 (lower is better) Translates to: GDAAFGASGRGLCTVRSEPRGLA*VPRTRR Trigger: TCTTCGGGTCCGGGGGACCCAGGCTAAGCCACGTGG...CTCAGAGCGGACAGTACAGAGGCCCCTCCCACTCGCCCCGAAAGCCGCGTCTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR GCA 90 bp | CACCCAGGGGCTCAGACAAGCGCTGCCGTGCTGGCTCCAGCCCTGTGGCCCTGCACCCATTACCTAGCCTaGTACCTGCCAGCCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: HPGAQTSAAVLAPALWPCTHYLA*YLPARE Trigger: CTCCCTGGCTGGCAGGTAGCAGGCTAGGTAATGGGT...GCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGTCTGAGCCCCTGGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCCCGGGCCCTGGGGATGGCGTCCCTCCAAACAGGTCAAGTGGGAGTGGATACAAGCGCTGCCGTGCTaGCTCCAGCCCTGTGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: SPGPWGWRPSKQVKWEWIQALPC*LQPCGP Trigger: AGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTG...TATCCACTCCCACTTGACCTGTTTGGAGGGACGCCATCCCCAGGGCCCGGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR GCA 90 bp | CACCCAGGGGCTCAGACAAGCGCTGCCGTGCTGGCTCCAGCCCTGTGGCCCTGCTGCTCAAGGGACAGATaGTCGCATTGGGGAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: HPGAQTSAAVLAPALWPCCSRDR*SHWGEV Trigger: CACCTCTCCCCAATGCGAGCATCTGTCCCTTGAGCA...GCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGTCTGAGCCCCTGGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCCCGGGCCCTGGGGATGGCGTCCCTCCAAACAGGTCAAGTGGGAGTGGATACCAGCCCTGTGGCCCTaGTCACCTGTCTGCCCACTC | + |
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Preference number: 2 (lower is better) Translates to: SPGPWGWRPSKQVKWEWIPALWP*SPVCPL Trigger: GAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGG...TATCCACTCCCACTTGACCTGTTTGGAGGGACGCCATCCCCAGGGCCCGGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR CCA 90 bp | AAACCCAGCCCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATGGCCCACACGCATTGGGGAGAGGTaGCTGGGAGGAGGCGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: KPSPSVSMGGHHHLRWPTRIGER*LGGGEA Trigger: GGCCTCGCCTCCTCCCAGCCACCTCTCCCCAATGCG...TGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGGGCTGGGTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR TCA 90 bp | TGGAGGCTGCCAGCCTGGGGCCAGCTCGGACTCGGGCTGGTGAGCGTGGCTCACGTTCTGAAACCAGAATaGTCCTTAAGTCGGCGGGGC | + |
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Preference number: 2 (lower is better) Translates to: WRLPAWGQLGLGLVSVAHVLKPE*SLSRRG Trigger: GCCCCGCCGACTTAAGGATCATTCTGGTTTCAGAAC...GTGAGCCACGCTCACCAGCCCGAGTCCGAGCTGGCCCCAGGCTGGCAGCCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR TCA 90 bp | AAACCCAGCCCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATGGCCCACAGTCACCCTTCCCCTGTaGCCCCCACAGTGGCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: KPSPSVSMGGHHHLRWPTVTLPL*PPQWLL Trigger: GAGGAGCCACTGTGGGGGTCACAGGGGAAGGGTGAC...TGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGGGCTGGGTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR CCA 90 bp | AAACCCAGCCCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATGGCCCACAGCAGAGCCGCTCCAGTaGGGAGCCTGGAGGCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: KPSPSVSMGGHHHLRWPTAEPLQ*GAWRLF Trigger: GAACAGCCTCCAGGCTCCCCACTGGAGCGGCTCTGC...TGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGGGCTGGGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGCTTGTTTTACGCCTTTaGAGGCTGCCAGCCTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: GRVPWPRSAVSEWGPSTWLVLRL*RLPAWG Trigger: GCCCCAGGCTGGCAGCCTCCAAAGGCGTAAAACAAG...CCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR TCA 90 bp | TCCCTCCAAACAGGTCAAGTGGGAGTGGATAAGGCCTCCGCCAAGCTGCATCTCGGGCTCCGGGGGTCCTaGGCAGAGCAGAAGGATCCT | + |
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Preference number: 2 (lower is better) Translates to: SLQTGQVGVDKASAKLHLGLRGS*AEQKDP Trigger: AGGATCCTTCTGCTCTGCTCAGGACCCCCGGAGCCC...GAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGACCTGTTTGGAGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGACGCGGCTTTCGGGGCGAGTGGGAGGGGCCTCTGTACTGTCCGCTCTGAGCCTTTCTGTGTCCTTTaGCTTGTTTTACGCCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: GDAAFGASGRGLCTVRSEPFCVL*LVLRLW Trigger: CCAAAGGCGTAAAACAAGGCAAAGGACACAGAAAGG...CTCAGAGCGGACAGTACAGAGGCCCCTCCCACTCGCCCCGAAAGCCGCGTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGCTTTCGCTCAGGAAGAGGTaGGTGGGGACATTCAATACC | + |
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Preference number: 2 (lower is better) Translates to: RVPWPRSAVSEWGPSTWLSLRKR*VGTFNT Trigger: GGTATTGAATGTCCCCACCCACCTCTTCCTGAGCGA...AAGCCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR CCA 90 bp | ACCCCACAGCTCCTTTCTGTGTCCTTTGCCTTGTTTTACGCCTTTGGAGGCTGCGACAGATGCTCGCATTaGGGAGAGGTGGCTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: TPQLLSVSFALFYAFGGCDRCSH*GEVAGR Trigger: CCTCCCAGCCACCTCTCCCCAATGCGAGCATCTGTC...GCAGCCTCCAAAGGCGTAAAACAAGGCAAAGGACACAGAAAGGAGCTGTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR-3UTR CCA 90 bp | TCCCTCCAAACAGGTCAAGTGGGAGTGGATAAGGCCTCCGCCAAGCTGCATCTCATGTCCCTAGGCATTTaGGATGTGTGTGACACCCAT | + |
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Preference number: 2 (lower is better) Translates to: SLQTGQVGVDKASAKLHLMSLGI*DVCDTH Trigger: ATGGGTGTCACACACATCCCAAATGCCTAGGGACAT...GAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGACCTGTTTGGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR TCA 72 bp | CGGGGCGAGTGGGAGGGGCCTCTGTACTGTCCGCTCTaGGAGGCGGAGTGTAAGGCCGCGCAGGCGCCGTTG | + |
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Preference number: 3 (lower is better) Translates to: RGEWEGPLYCPL*EAECKAAQAPL Trigger: CAACGGCGCCTGCGCGGCCTTACACTCCGCCTCTCAGAGCGGACAGTACAGAGGCCCCTCCCACTCGCCCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR TCA 72 bp | GGCTGCCAGCCTGGGGCCAGCTCGGACTCGGGCTGGTaGGCGTGGCTCACTGCACCTTCCTTGAAGGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: GCQPGASSDSGW*AWLTAPSLKAS Trigger: TGAGGCCTTCAAGGAAGGTGCAGTGAGCCACGCTCACCAGCCCGAGTCCGAGCTGGCCCCAGGCTGGCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR GCA 72 bp | ACAAGCGCTGCCGTGCTGGCTCCAGCCCTGTGGCCCTaGTCACCTGTCTGCCCACTCAGGGCAGGGTGCCTT | + |
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Preference number: 3 (lower is better) Translates to: TSAAVLAPALWP*SPVCPLRAGCL Trigger: AAGGCACCCTGCCCTGAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR GCA 72 bp | CATGACGCCACCCAGGGGCTCAGACAAGCGCTGCCGTaGTGGCTCCAGCCCTGTGGCCCTGCTCACCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: HDATQGLRQALP*WLQPCGPAHLS Trigger: AGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGTCTGAGCCCCTGGGTGGCGTCATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR GCA 72 bp | CGCTCGCTCGCTCGCTCCACCTGCTCAAGGGACAGATaGTCGCATTGGGGAGAGGTGGCTGGGAGGAGGCGA | + |
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Preference number: 3 (lower is better) Translates to: RSLARSTCSRDR*SHWGEVAGRRR Trigger: TCGCCTCCTCCCAGCCACCTCTCCCCAATGCGAGCATCTGTCCCTTGAGCAGGTGGAGCGAGCGAGCGAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR CCA 72 bp | CCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATaGCCCACACTCATGACGCCACCCAGGGGCTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: PSVSMGGHHHLR*PTLMTPPRGSD Trigger: GTCTGAGCCCCTGGGTGGCGTCATGAGTGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR CCA 72 bp | CTTTGCCTTGTTTTACGCCTTTGGAGGCTGCCAGCCTaGGGCCAGCTCGGACTCGGGCTGGTGAGCGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: LCLVLRLWRLPA*GQLGLGLVSVA Trigger: AGCCACGCTCACCAGCCCGAGTCCGAGCTGGCCCCAGGCTGGCAGCCTCCAAAGGCGTAAAACAAGGCAAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR CCA 72 bp | GGGCCCTGGGGATGGCGTCCCTCCAAACAGGTCAAGTaGGAGTGGATAAGGCCTCCGCCAAGCTGCATCTCC | + |
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Preference number: 3 (lower is better) Translates to: GPWGWRPSKQVK*EWIRPPPSCIS Trigger: GGAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGACCTGTTTGGAGGGACGCCATCCCCAGGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR GCA 72 bp | GGCCAGCTCGGACTCGGGCTGGTGAGCGTGGCTCACTaGACCTTCCTTGAAGGCCTCATGCTCCTAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: GQLGLGLVSVAH*TFLEGLMLLSR Trigger: TCTGCTTAGGAGCATGAGGCCTTCAAGGAAGGTGCAGTGAGCCACGCTCACCAGCCCGAGTCCGAGCTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| 3UTR CCA 72 bp | TGGGGATGGCGTCCCTCCAAACAGGTCAAGTGGGAGTaGATAAGGCCTCCGCCAAGCTGCATCTCCTCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: WGWRPSKQVKWE*IRPPPSCISSW Trigger: CCACGAGGAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGACCTGTTTGGAGGGACGCCATCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGCTCCAGCCCTGTGGCCCTGCTCACCTGTCTGCCCACTCAGGGCAGGGTGTCCTTTCTGTGTCCTTaGCCTTGTTTTACGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: AGSSPVALLTCLPTQGRVSFLCP*PCFTPL Trigger: CAAAGGCGTAAAACAAGGCAAAGGACACAGAAAGGA...CACCCTGCCCTGAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| 3UTR GCA 72 bp | CAGGTCAAGTGGGAGTGGATAAGGCCTCCGCCAAGCTaGATCTCCTCGTGGACAACACATCCGGGTAACGGG | + |
|
Preference number: 3 (lower is better) Translates to: QVKWEWIRPPPS*ISSWTTHPGNG Trigger: CCCGTTACCCGGATGTGTTGTCCACGAGGAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| 3UTR CCA 72 bp | CCTGAGAAACAAACCCAGCCCCTCCGTGTCGATGGGTaGACACCACCACCTGAGATGGCCCACACTCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: PEKQTQPLRVDG*TPPPEMAHTHD Trigger: GTCATGAGTGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGGGCTGGGTTTGTTTCTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTCCAAACAGGTCAAGTGGGAGTGGATAAGGCCTCCGCCAAGCTGCATCTCCCTTGTTTTACGCCTTaGGAGGCTGCCAGCCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLQTGQVGVDKASAKLHLPCFTP*EAASLG Trigger: CCCCAGGCTGGCAGCCTCCAAAGGCGTAAAACAAGG...GAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGACCTGTTTGGAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCCCACAGCTCCTTTCTGTGTCCTTTGCCTTGTTTTACGCCTTTGGAGGCTGCGGACAGATGCTCGCATaGGGGAGAGGTGGCTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TPQLLSVSFALFYAFGGCGQMLA*GRGGWE Trigger: CTCCCAGCCACCTCTCCCCAATGCGAGCATCTGTCC...GCAGCCTCCAAAGGCGTAAAACAAGGCAAAGGACACAGAAAGGAGCTGTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| 3UTR-3UTR CAA 90 bp | GATGTGTGTGACACCCATTACCTAGCCTGCTACCTGCCAGCCAGGGAGCTGGGGTCTGTGTCCTTTGCCTaGTTTTACGCCTTTGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: DVCDTHYLACYLPARELGSVSFA*FYAFGG Trigger: GCCTCCAAAGGCGTAAAACAAGGCAAAGGACACAGA...CCCCAGCTCCCTGGCTGGCAGGTAGCAGGCTAGGTAATGGGTGTCACACACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| 3UTR TCA 72 bp | CCAGTGGGGAGCCTGGAGGCTGTTCTGAAACCAGAATaGTCCTTAAGTCGGCGGGGCCACTTTCAGGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: PVGSLEAVLKPE*SLSRRGHFQVT Trigger: AGTGACCTGAAAGTGGCCCCGCCGACTTAAGGATCATTCTGGTTTCAGAACAGCCTCCAGGCTCCCCACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| 3UTR TCA 72 bp | ACAAGCCCAAATGTCCCTAGGCATTTGGGATGTGTGTaGCACCCATTACCTAGCCTGCTACCTGCCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TSPNVPRHLGCV*HPLPSLLPASQ Trigger: CTGGCTGGCAGGTAGCAGGCTAGGTAATGGGTGTCACACACATCCCAAATGCCTAGGGACATTTGGGCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| 3UTR CCA 72 bp | GAGTGGATAAGGCCTCCGCCAAGCTGCATCTCCTCGTaGACAACACATCCGGGTAACGGGTGTAGAAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: EWIRPPPSCISS*TTHPGNGCRNK Trigger: TTTGTTTCTACACCCGTTACCCGGATGTGTTGTCCACGAGGAGATGCAGCTTGGCGGAGGCCTTATCCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| 3UTR GCA 72 bp | GACATTCAATACCCCACAGCTCCTTTCTGTGTCCTTTaGCTTGTTTTACGCCTTTGGAGGCTGCCAGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: DIQYPTAPFCVL*LVLRLWRLPAW Trigger: CCAGGCTGGCAGCCTCCAAAGGCGTAAAACAAGGCAAAGGACACAGAAAGGAGCTGTGGGGTATTGAATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGGCTGCCAGCCTGGGGCCAGCTCGGACTCGGGCTGGTGAGCGTGGCTCACACCATGGGCTGCCAGTaGGCCACCCTTGGCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: WRLPAWGQLGLGLVSVAHTMGCQ*ATLGLP Trigger: GGGCAGGCCAAGGGTGGCTCACTGGCAGCCCATGGT...GTGAGCCACGCTCACCAGCCCGAGTCCGAGCTGGCCCCAGGCTGGCAGCCTCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | CACCCAGGGGCTCAGACAAGCGCTGCCGTGCTGGCTCCAGCCCTGTGGCCCTGCCCAGTGAGCCACCCTTaGCCTGCCCCGTGCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HPGAQTSAAVLAPALWPCPVSHP*PAPCPM Trigger: CATGGGGCACGGGGCAGGCCAAGGGTGGCTCACTGG...GCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGTCTGAGCCCCTGGGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | GGAGACGCGGCTTTCGGGGCGAGTGGGAGGGGCCTCTGTACTGTCCGCTCTGAGGCAGCAGGTCCAGGATaGCGGCCGCGGAGCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GDAAFGASGRGLCTVRSEAAGPG*RPRSSH Trigger: GTGGGAGCTCCGCGGCCGGCATCCTGGACCTGCTGC...CTCAGAGCGGACAGTACAGAGGCCCCTCCCACTCGCCCCGAAAGCCGCGTCTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGCTCCAGCCCTGTGGCCCTGCTCACCTGTCTGCCCACTCAGGGCAGGGTGCCGAGGTGGTACCCGTaGAGGCGGAGGCAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGSSPVALLTCLPTQGRVPRWYP*RRRQRW Trigger: CCACCTCTGCCTCCGCCTCCACGGGTACCACCTCGG...CACCCTGCCCTGAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGGCTGCCAGCCTGGGGCCAGCTCGGACTCGGGCTGGTGAGCGTGGCTCACGGCAGTCCACGGGGGTaGGTGTGGCATAGATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WRLPAWGQLGLGLVSVAHGSPRG*VWHRSS Trigger: GCTGGATCTATGCCACACTCACCCCCGTGGACTGCC...GTGAGCCACGCTCACCAGCCCGAGTCCGAGCTGGCCCCAGGCTGGCAGCCTCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | ACCCAGGGGCTCAGACAAGCGCTGCCGTGCTGGCTCCAGCCCTGTGGCCCTGCTTGCTGGCTGTGCTGGTaGAGGCCGGGGTGGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TQGLRQALPCWLQPCGPACWLCW*RPGWWM Trigger: CATCCACCACCCCGGCCTCCACCAGCACAGCCAGCA...AGCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGTCTGAGCCCCTGGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | GGAGACGCGGCTTTCGGGGCGAGTGGGAGGGGCCTCTGTACTGTCCGCTCTGAGCCTGCTGGGACAGCTTaGCTGCAGCAGCTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GDAAFGASGRGLCTVRSEPAGTA*LQQLPA Trigger: GGCTGGCAGCTGCTGCAGCCAAGCTGTCCCAGCAGG...CTCAGAGCGGACAGTACAGAGGCCCCTCCCACTCGCCCCGAAAGCCGCGTCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | GATGTGTGTGACACCCATTACCTAGCCTGCTACCTGCCAGCCAGGGAGCTGGGGGGCTGCTCGGGGGCCTaGGGGCCTTGGAGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DVCDTHYLACYLPARELGGCSGA*GPWSPG Trigger: TCCTGGGCTCCAAGGCCCTCAGGCCCCCGAGCAGCC...CCCCAGCTCCCTGGCTGGCAGGTAGCAGGCTAGGTAATGGGTGTCACACACATC 67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | GGAGACGCGGCTTTCGGGGCGAGTGGGAGGGGCCTCTGTACTGTCCGCTCTGAGGGGGTTGTACTCGAGTaGGCCAACCTCCTCGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GDAAFGASGRGLCTVRSEGVVLE*ANLLAG Trigger: GCCAGCGAGGAGGTTGGCGCACTCGAGTACAACCCC...CTCAGAGCGGACAGTACAGAGGCCCCTCCCACTCGCCCCGAAAGCCGCGTCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | CCACCTGAGATGGCCCACACTCATGACGCCACCCAGGGGCTCAGACAAGCGCTGGAGCCACCCTTGGCCTaGCCCGTGCCCCATGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PPEMAHTHDATQGLRQALEPPLA*PVPHVV Trigger: GACCACATGGGGCACGGGGCAGGCCAAGGGTGGCTC...CAGCGCTTGTCTGAGCCCCTGGGTGGCGTCATGAGTGTGGGCCATCTCAGGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGGCTGCCAGCCTGGGGCCAGCTCGGACTCGGGCTGGTGAGCGTGGCTCACGGTCAGCCAGGCTACTaGTGTGTGATTCAGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WRLPAWGQLGLGLVSVAHGQPGY*CVIQVG Trigger: CCCCACCTGAATCACACAGCAGTAGCCTGGCTGACC...GTGAGCCACGCTCACCAGCCCGAGTCCGAGCTGGCCCCAGGCTGGCAGCCTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | GGAGACGCGGCTTTCGGGGCGAGTGGGAGGGGCCTCTGTACTGTCCGCTCTGAGGCCCCGTGCCCCATGTaGTCTGCAGGCAAGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDAAFGASGRGLCTVRSEAPCPM*SAGKSQ Trigger: CTGACTCTTGCCTGCAGACCACATGGGGCACGGGGC...CTCAGAGCGGACAGTACAGAGGCCCCTCCCACTCGCCCCGAAAGCCGCGTCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGGGCTCAGACAAGCGCTGCCGTGCTGGCTCCAGCCCTGTGGCCCTGCTCGAGGTTGGTCACGTTaGGAACACGCTTGCGGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: TQGLRQALPCWLQPCGPARGWSR*EHACGS Trigger: CGAACCGCAAGCGTGTTCTCAACGTGACCAACCTCG...AGCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGTCTGAGCCCCTGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGCTTCCTGGCTGCTGGCTGTaGTGGTGGAGGCCGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVPWPRSAVSEWGPSTWLPGCWL*WWRPGW Trigger: CCACCCCGGCCTCCACCAGCACAGCCAGCAGCCAGG...AAGCCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | AGCCCCGGGCCCTGGGGATGGCGTCCCTCCAAACAGGTCAAGTGGGAGTGGATACCTGTGAGGCCTGGCTaGTGGCTGTGCTGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPGPWGWRPSKQVKWEWIPVRPG*WLCWWR Trigger: CCTCCACCAGCACAGCCAGCAGCCAGGCCTCACAGG...TATCCACTCCCACTTGACCTGTTTGGAGGGACGCCATCCCCAGGGCCCGGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | ACCCAGGGGCTCAGACAAGCGCTGCCGTGCTGGCTCCAGCCCTGTGGCCCTGCTCAAGCAGGTCTAGGTTaGGGATGGTGGGTGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQGLRQALPCWLQPCGPAQAGLG*GWWVRL Trigger: CAGCCTCACCCACCATCCCCAACCTAGACCTGCTTG...AGCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGTCTGAGCCCCTGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | GGAGACGCGGCTTTCGGGGCGAGTGGGAGGGGCCTCTGTACTGTCCGCTCTGAGTTGTCTTGGCACCGATaGACCGACCCTGGCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GDAAFGASGRGLCTVRSELSWHR*TDPGCG Trigger: CCCACAGCCAGGGTCGGTCCATCGGTGCCAAGACAA...CTCAGAGCGGACAGTACAGAGGCCCCTCCCACTCGCCCCGAAAGCCGCGTCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGTGTGACACCCATTACCTAGCCTGCTACCTGCCAGCCAGGGAGCTGGGGGGCTGCTGGCTGTGCTaGTGGAGGCCGGGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DVCDTHYLACYLPARELGGCWLC*WRPGWW Trigger: CCACCACCCCGGCCTCCACCAGCACAGCCAGCAGCC...CCCCAGCTCCCTGGCTGGCAGGTAGCAGGCTAGGTAATGGGTGTCACACACATC 66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | GGAGACGCGGCTTTCGGGGCGAGTGGGAGGGGCCTCTGTACTGTCCGCTCTGAGCCAACACAGCTGCCGTaGAACCAGTCCTTGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GDAAFGASGRGLCTVRSEPTQLP*NQSLQA Trigger: TGCCTGCAAGGACTGGTTCCACGGCAGCTGTGTTGG...CTCAGAGCGGACAGTACAGAGGCCCCTCCCACTCGCCCCGAAAGCCGCGTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGCAGGGGGCTGGCTGTTaGGGTTGTACTCGAGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GRVPWPRSAVSEWGPSTWQGAGC*GCTRVR Trigger: GCGCACTCGAGTACAACCCCAACAGCCAGCCCCCTG...CCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCCGGGCCCTGGGGATGGCGTCCCTCCAAACAGGTCAAGTGGGAGTGGATAATCTTCCGGGCACCATaGGCTGCCAGTGAGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: SPGPWGWRPSKQVKWEWIIFRAP*AASEPP Trigger: GGGTGGCTCACTGGCAGCCCATGGTGCCCGGAAGAT...TATCCACTCCCACTTGACCTGTTTGGAGGGACGCCATCCCCAGGGCCCGGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGGCTGCCAGCCTGGGGCCAGCTCGGACTCGGGCTGGTGAGCGTGGCTCACTCCTTGATGAACAGCTaGCTGCCATTCTGCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WRLPAWGQLGLGLVSVAHSLMNS*LPFCTG Trigger: ACCAGTGCAGAATGGCAGTCAGCTGTTCATCAAGGA...GTGAGCCACGCTCACCAGCCCGAGTCCGAGCTGGCCCCAGGCTGGCAGCCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGAAGGCCGCCTCTGTGTaGGAAAGACTCCAGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRVPWPRSAVSEWGPSTWKAASV*ERLQGP Trigger: TGGCCCCTGGAGTCTTTCTCACACAGAGGCGGCCTT...CCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGCTTGGCTGCAGCAGCTaGCAGCCCCGTCTCAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRVPWPRSAVSEWGPSTWLGCSS*QPRLNG Trigger: TCCATTGAGACGGGGCTGGCAGCTGCTGCAGCCAAG...CCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGGTCCTTGATGAGCTGTaGGGGCCTGAAGTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRVPWPRSAVSEWGPSTWVLDEL*GPEVLW Trigger: CCAGAGCACTTCAGGCCCTCACAGCTCATCAAGGAC...CCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGCTCCAGCCCTGTGGCCCTGCTCACCTGTCTGCCCACTCAGGGCAGGGTGTCTTGCTCCCATCTTTaGGCTTCAGAGTTTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGSSPVALLTCLPTQGRVSCSHL*ASEFWG Trigger: CCCCCAAAACTCTGAAGCTCAAAGATGGGAGCAAGA...CACCCTGCCCTGAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGGCTTCGAGGTGGGCATaGGGAGAGCCTCCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRVPWPRSAVSEWGPSTWASRWA*GEPPSC Trigger: ACAAGAAGGAGGCTCTCCTCATGCCCACCTCGAAGC...CCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | CACCCAGGGGCTCAGACAAGCGCTGCCGTGCTGGCTCCAGCCCTGTGGCCCTGCCACGCTTGCGGTTCGTaGTATAGTAATAGTCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: HPGAQTSAAVLAPALWPCHACGS*YSNSPR Trigger: TCGTGGACTATTACTATAGCACGAACCGCAAGCGTG...GCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGTCTGAGCCCCTGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | ACCCAGGGGCTCAGACAAGCGCTGCCGTGCTGGCTCCAGCCCTGTGGCCCTGCTTTCGTCCTCATGCTCTaGCAAAGCCTGCTTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TQGLRQALPCWLQPCGPAFVLML*QSLLLR Trigger: ACGAAGAAGCAGGCTTTGGCAGAGCATGAGGACGAA...AGCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGTCTGAGCCCCTGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | CCACCTGAGATGGCCCACACTCATGACGCCACCCAGGGGCTCAGACAAGCGCTGTTTCACGTCCGGTGTTaGCCCAGGGCCGTGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPEMAHTHDATQGLRQALFHVRC*PRAVFV Trigger: CACAAACACGGCCCTGGGCCAACACCGGACGTGAAA...CAGCGCTTGTCTGAGCCCCTGGGTGGCGTCATGAGTGTGGGCCATCTCAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCTGCCAGCCTGGGGCCAGCTCGGACTCGGGCTGGTGAGCGTGGCTCACGAGCCGGCTTCCTTTTaGTGTTCTTCTTCTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WRLPAWGQLGLGLVSVAHEPASF*CSSSSC Trigger: ACAGGAAGAAGAAGAACACCAAAAGGAAGCCGGCTC...GTGAGCCACGCTCACCAGCCCGAGTCCGAGCTGGCCCCAGGCTGGCAGCCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGTGTGACACCCATTACCTAGCCTGCTACCTGCCAGCCAGGGAGCTGGGGTGGTGGATGCTGGGGTaGTGGAGGCCGAGGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: DVCDTHYLACYLPARELGWWMLG*WRPRWY Trigger: GTACCACCTCGGCCTCCACCACCCCAGCATCCACCA...CCCCAGCTCCCTGGCTGGCAGGTAGCAGGCTAGGTAATGGGTGTCACACACATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCAAACAGGTCAAGTGGGAGTGGATAAGGCCTCCGCCAAGCTGCATCTCGTGAGGCCTGGCTGCTaGCTGTGCTGGTGGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLQTGQVGVDKASAKLHLVRPGC*LCWWRP Trigger: CGGCCTCCACCAGCACAGCCAGCAGCCAGGCCTCAC...GAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGACCTGTTTGGAGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGCTCCAGCCCTGTGGCCCTGCTCACCTGTCTGCCCACTCAGGGCAGGGTGTGTTTCCCAGACTTGTaGGAACCTTTGAACGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGSSPVALLTCLPTQGRVCFPDL*EPLNAS Trigger: GGAAGCGTTCAAAGGTTCTCACAAGTCTGGGAAACA...CACCCTGCCCTGAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGCTCCAGCCCTGTGGCCCTGCTCACCTGTCTGCCCACTCAGGGCAGGGTGCAGCTCCCCATCATCTaGTACGTACTCATACTCATC | + |
|
Preference number: 4 (lower is better) Translates to: AGSSPVALLTCLPTQGRVQLPII*YVLILI Trigger: GATGAGTATGAGTACGTATCAGATGATGGGGAGCTG...CACCCTGCCCTGAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTCCAGCCCTGTGGCCCTGCTCACCTGTCTGCCCACTCAGGGCAGGGTGAACGCTTCCAATAGGTaGTTTCCCATGTACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGSSPVALLTCLPTQGRVNASNR*FPMYQQ Trigger: CTGCTGGTACATGGGAAAGCACCTATTGGAAGCGTT...CACCCTGCCCTGAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | GATGTGTGTGACACCCATTACCTAGCCTGCTACCTGCCAGCCAGGGAGCTGGGGGTGCCCCATGTGGTCTaGAGGCAAGAGTCAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DVCDTHYLACYLPARELGVPHVV*RQESEA Trigger: GGCCTCTGACTCTTGCCTGCAGACCACATGGGGCAC...CCCCAGCTCCCTGGCTGGCAGGTAGCAGGCTAGGTAATGGGTGTCACACACATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | GGAGACGCGGCTTTCGGGGCGAGTGGGAGGGGCCTCTGTACTGTCCGCTCTGAGGGGGCTTGGGAATTTTaGATGGCTTGGGCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GDAAFGASGRGLCTVRSEGAWEF*MAWASS Trigger: TGAAGATGCCCAAGCCATCCAAAATTCCCAAGCCCC...CTCAGAGCGGACAGTACAGAGGCCCCTCCCACTCGCCCCGAAAGCCGCGTCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | AAACCCAGCCCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATGGCCCACACTAGGTTGGGGATGGTaGGTGAGGCTGACTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KPSPSVSMGGHHHLRWPTLGWGW*VRLTPC Trigger: GCAAGGAGTCAGCCTCACCCACCATCCCCAACCTAG...TGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGGGCTGGGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | TCCCTCCAAACAGGTCAAGTGGGAGTGGATAAGGCCTCCGCCAAGCTGCATCTCCCATGTAGCCCACGGTaGGCTGGCTACCTGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SLQTGQVGVDKASAKLHLPCSPR*AGYLAH Trigger: GTGTGCCAGGTAGCCAGCTCACCGTGGGCTACATGG...GAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGACCTGTTTGGAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | GATGTGTGTGACACCCATTACCTAGCCTGCTACCTGCCAGCCAGGGAGCTGGGGGGCATAGATCCAGCCTaGGGGGATGAAGAGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DVCDTHYLACYLPARELGGIDPA*GDEEGL Trigger: CAGACCCTCTTCATCCCCTCAGGCTGGATCTATGCC...CCCCAGCTCCCTGGCTGGCAGGTAGCAGGCTAGGTAATGGGTGTCACACACATC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | GGAGACGCGGCTTTCGGGGCGAGTGGGAGGGGCCTCTGTACTGTCCGCTCTGAGCTGCTTCTTCGTCCATaGCCTAAAAGCACCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GDAAFGASGRGLCTVRSELLLRP*PKSTIE Trigger: CTCAATGGTGCTTTTAGGTCATGGACGAAGAAGCAG...CTCAGAGCGGACAGTACAGAGGCCCCTCCCACTCGCCCCGAAAGCCGCGTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCAAACAGGTCAAGTGGGAGTGGATAAGGCCTCCGCCAAGCTGCATCTCTGGTCACCTTGGGCTTaGCCAGCAGCGCGTCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQTGQVGVDKASAKLHLWSPWA*PAARHR Trigger: CCGATGACGCGCTGCTGGCCAAGCCCAAGGTGACCA...GAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGACCTGTTTGGAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | AAACCCAGCCCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATGGCCCACACAGGAGGGATCGAGGTaGGGTAGTCTCAACAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPSPSVSMGGHHHLRWPTQEGSR*GSLNRR Trigger: TCTCCTGTTGAGACTACCCCACCTCGATCCCTCCTG...TGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGGGCTGGGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGTGTGACACCCATTACCTAGCCTGCTACCTGCCAGCCAGGGAGCTGGGGTTCTGCTCCTCCTGCTaGGACAGCTTGGCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DVCDTHYLACYLPARELGFCSSC*DSLAAA Trigger: TGCTGCAGCCAAGCTGTCCCAGCAGGAGGAGCAGAA...CCCCAGCTCCCTGGCTGGCAGGTAGCAGGCTAGGTAATGGGTGTCACACACATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGAAGTCCGCTTTTTCTTaGGTGTGGACTTGCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRVPWPRSAVSEWGPSTWKSAFS*VWTCHG Trigger: CCCATGGCAAGTCCACACTCAAGAAAAAGCGGACTT...CCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCCGGGCCCTGGGGATGGCGTCCCTCCAAACAGGTCAAGTGGGAGTGGATAGGGGTAAACATAGTCTaGGTCCTTGAAGCAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SPGPWGWRPSKQVKWEWIGVNIV*VLEAGI Trigger: GATGCCTGCTTCAAGGACTCAGACTATGTTTACCCC...TATCCACTCCCACTTGACCTGTTTGGAGGGACGCCATCCCCAGGGCCCGGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCCGGGCCCTGGGGATGGCGTCCCTCCAAACAGGTCAAGTGGGAGTGGATATCTTTGACCGGGACTTaGAGACGGGGTTATCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGPWGWRPSKQVKWEWISLTGT*RRGYLR Trigger: ACGAAGATAACCCCGTCTTCAAGTCCCGGTCAAAGA...TATCCACTCCCACTTGACCTGTTTGGAGGGACGCCATCCCCAGGGCCCGGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | TCCCTCCAAACAGGTCAAGTGGGAGTGGATAAGGCCTCCGCCAAGCTGCATCTCCAGGCTACTGCTGTGTaGTTCAGGTGGGGGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQTGQVGVDKASAKLHLQATAV*FRWGLR Trigger: CCTGAGCCCCCACCTGAATCACACAGCAGTAGCCTG...GAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGACCTGTTTGGAGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | CCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATGGCCCACACTCATGACGTCGTATGCCCTCATCTaGATCTCCACACTGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSVSMGGHHHLRWPTLMTSYALI*ISTLRL Trigger: CAGCCTCAGTGTGGAGATGCAGATGAGGGCATACGA...CGTCATGAGTGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGCTTGGGAGTTCGTCCTCATaGTCTGCCAAAGCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVPWPRSAVSEWGPSTWLGSSSS*SAKACF Trigger: GAAGCAGGCTTTGGCAGAGCATGAGGACGAACTCCC...AAGCCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGCTTTGTGAGGGCCTGAAGTaGTCTGGGAGTTCGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVPWPRSAVSEWGPSTWLCEGLK*SGSSSS Trigger: TGAGGACGAACTCCCAGAGCACTTCAGGCCCTCACA...AAGCCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | GATGTGTGTGACACCCATTACCTAGCCTGCTACCTGCCAGCCAGGGAGCTGGGGTGCCTGTGCCTTTGTTaGCACCACCAATCTTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DVCDTHYLACYLPARELGCLCLC*HHQSSG Trigger: CCCGGAAGATTGGTGGTGGCAACAAAGGCACAGGCA...CCCCAGCTCCCTGGCTGGCAGGTAGCAGGCTAGGTAATGGGTGTCACACACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | AAACCCAGCCCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATGGCCCACAAGTCTCAACAGGAGATaGCGGTTCTTCCTTCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KPSPSVSMGGHHHLRWPTSLNRR*RFFLLP Trigger: CGGGAGAAGGAAGAACCGCCATCTCCTGTTGAGACT...TGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGGGCTGGGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGTGTGACACCCATTACCTAGCCTGCTACCTGCCAGCCAGGGAGCTGGGGAGGACAAGTCCCTTTTaGGGGCGCTCTTCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DVCDTHYLACYLPARELGRTSPF*GRSSSS Trigger: GGAGGAAGAAGAGCGCCCCCAAAAGGGACTTGTCCT...CCCCAGCTCCCTGGCTGGCAGGTAGCAGGCTAGGTAATGGGTGTCACACACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | CCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATGGCCCACACTCATGACGCATAGTCTGAGTCCTTaGAGCAGGCATCCAGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSVSMGGHHHLRWPTLMTHSLSP*SRHPGD Trigger: ATCACCTGGATGCCTGCTTCAAGGACTCAGACTATG...CGTCATGAGTGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGCTTCCAGGGCCGTGTTTGTaGCAAGTCCGCTTTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVPWPRSAVSEWGPSTWLPGPCL*QVRFFL Trigger: CAAGAAAAAGCGGACTTGGCACAAACACGGCCCTGG...AAGCCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | AAACCCAGCCCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATGGCCCACATTCTTCCTGTTTTTCTaGTCCTCCTGCTGGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPSPSVSMGGHHHLRWPTFFLFF*SSCWDS Trigger: GCTGTCCCAGCAGGAGGAGCAGAAAAACAGGAAGAA...TGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGGGCTGGGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGCTTACTCAGGACGCTCTTTaGGGTCTTCCCTTTCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RVPWPRSAVSEWGPSTWLTQDAL*GLPFLR Trigger: CCGAAGAAAGGGAAGACCCCAAAGAGCGTCCTGAGT...AAGCCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR TCA 90 bp | AGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGCTTCGCTCTTCTTCCTCCTaGTGGGAAACTCGTCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: RVPWPRSAVSEWGPSTWLRSSSS*WETRLS Trigger: AGATAGACGAGTTTCCCATCAGGAGGAAGAAGAGCG...AAGCCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | AGCCCCGGGCCCTGGGGATGGCGTCCCTCCAAACAGGTCAAGTGGGAGTGGATACTTTCCATGTCATTCTaGGTGTGGACTGTGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SPGPWGWRPSKQVKWEWILSMSF*VWTVSL Trigger: TAAGGACACAGTCCACACGCAGAATGACATGGAAAG...TATCCACTCCCACTTGACCTGTTTGGAGGGACGCCATCCCCAGGGCCCGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | GATGTGTGTGACACCCATTACCTAGCCTGCTACCTGCCAGCCAGGGAGCTGGGGTCACTTTGGCATTTCTaGCTGGCTTGGTGTCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DVCDTHYLACYLPARELGSLWHF*LAWCPC Trigger: ACACGGACACCAAGCCAGGCAGAAATGCCAAAGTGA...CCCCAGCTCCCTGGCTGGCAGGTAGCAGGCTAGGTAATGGGTGTCACACACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGCTTTTTGGCATTTCTGCCTaGCTTGGTGTCCGTGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RVPWPRSAVSEWGPSTWLFGISA*LGVRVD Trigger: ATCGACACGGACACCAAGCCAGGCAGAAATGCCAAA...AAGCCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCAAACAGGTCAAGTGGGAGTGGATAAGGCCTCCGCCAAGCTGCATCTCCATTTCTGCCTGGCTTaGTGTCCGTGTCGATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLQTGQVGVDKASAKLHLHFCLA*CPCRCA Trigger: TGCACATCGACACGGACACCAAGCCAGGCAGAAATG...GAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGACCTGTTTGGAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGAGTTTCCCGTTCCGATaGATCTTCAAGATCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRVPWPRSAVSEWGPSTWSFPFR*IFKIFP Trigger: TGGAAAGATCTTGAAGATCCATCGGAACGGGAAACT...CCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR GCA 90 bp | AAACCCAGCCCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATGGCCCACAGTAACGAGTCAGGTTTaGTGTTCTTGTATTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: KPSPSVSMGGHHHLRWPTVTSQV*CSCIST Trigger: AGTGGAAATACAAGAACAGCAAACCTGACTCGTTAC...TGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGGGCTGGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| 3UTR CAA 72 bp | GGACATTCAATACCCCACAGCTCCTTTCTGTGTCCTTaGCCTTGTTTTACGCCTTTGGAGGCTGCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GHSIPHSSFLCP*PCFTPLEAASL Trigger: CAGGCTGGCAGCCTCCAAAGGCGTAAAACAAGGCAAAGGACACAGAAAGGAGCTGTGGGGTATTGAATGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CCA 90 bp | ACCCCACAGCTCCTTTCTGTGTCCTTTGCCTTGTTTTACGCCTTTGGAGGCTGCTTGTACGTTTTCCTTTaGCAGCAGTGTTGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TPQLLSVSFALFYAFGGCLYVFL*QQCCWG Trigger: CCCCCAACAACACTGCTGCCAAAGGAAAACGTACAA...GCAGCCTCCAAAGGCGTAAAACAAGGCAAAGGACACAGAAAGGAGCTGTGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CAA 90 bp | CACCCAGGGGCTCAGACAAGCGCTGCCGTGCTGGCTCCAGCCCTGTGGCCCTGCTTGGTCACCTTGGGCTaGGCCAGCAGCGCGTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: HPGAQTSAAVLAPALWPCLVTLG*ASSASS Trigger: CGATGACGCGCTGCTGGCCAAGCCCAAGGTGACCAA...GCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGTCTGAGCCCCTGGGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CAA 90 bp | ACCCAGGGGCTCAGACAAGCGCTGCCGTGCTGGCTCCAGCCCTGTGGCCCTGCTCAGGCCTGTCTTGTCTaGGCACCGATGGACCGACCC | + |
|
Preference number: 5 (lower is better) Translates to: TQGLRQALPCWLQPCGPAQACLV*APMDRP Trigger: GGGTCGGTCCATCGGTGCCAAGACAAGACAGGCCTG...AGCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGTCTGAGCCCCTGGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CAA 90 bp | ACCCAGGGGCTCAGACAAGCGCTGCCGTGCTGGCTCCAGCCCTGTGGCCCTGCTGGCCCAGGGCCGTGTTaGTGCCAAGTCCGCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TQGLRQALPCWLQPCGPAGPGPC*CQVRFF Trigger: GAAAAAGCGGACTTGGCACAAACACGGCCCTGGGCC...AGCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGTCTGAGCCCCTGGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CAA 90 bp | CCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATGGCCCACACTCATGACGGCCAGTGAGCCACCCTaGGCCTGCCCCGTGCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PSVSMGGHHHLRWPTLMTASEPP*ACPVPH Trigger: ATGGGGCACGGGGCAGGCCAAGGGTGGCTCACTGGC...CGTCATGAGTGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS GCA 90 bp | GGGCCATGGGCTGGGAGGCACGGCCAGCCTGGGACCCCGAGAATGTaGCGGCTGCTGTATATTCGTGGTCAGCCAGGCTACTGCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GPWAGRHGQPGTPRM*RLLYIRGQPGYCCV Trigger: CACACAGCAGTAGCCTGGCTGACCACGAATATACAGCAGCCGGCACATTCTCGGGGTCCCAGGCTGGCCGTGCCTCCCAGCCCATGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS CCA 90 bp | CGCTTGCCTGTGCCTTTGTTGCCACCACCAATCTTCCGGGCACCATaGGCTGCCAGTGAGCCACCCTTGGCCTGCCCCGTGCCCCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLPVPLLPPPIFRAP*AASEPPLACPVPHV Trigger: CACATGGGGCACGGGGCAGGCCAAGGGTGGCTCACTGGCAGCCCATGGTGCCCGGAAGATTGGTGGTGGCAACAAAGGCACAGGCAAGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGGCTGCCAGCCTGGGGCCAGCTCGGACTCGGGCTGGTGAGCGTGGCTCACTCATATAGGGAGATGTaGGCTGAGGCTGGCCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: WRLPAWGQLGLGLVSVAHSYREM*AEAGRM Trigger: CATCCGGCCAGCCTCAGCCAACATCTCCCTATATGA...GTGAGCCACGCTCACCAGCCCGAGTCCGAGCTGGCCCCAGGCTGGCAGCCTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGCTCCAGCCCTGTGGCCCTGCTCACCTGTCTGCCCACTCAGGGCAGGGTGTTCGGTGGCTCCATCTaGGTCAGCGCCTCCTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: AGSSPVALLTCLPTQGRVFGGSI*VSASFV Trigger: CACAAAGGAGGCGCTGACCAAGATGGAGCCACCGAA...CACCCTGCCCTGAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGCTCCAGCCCTGTGGCCCTGCTCACCTGTCTGCCCACTCAGGGCAGGGTGGCATTTCTGCCTGGCTaGGTGTCCGTGTCGATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGSSPVALLTCLPTQGRVAFLPG*VSVSMC Trigger: GCACATCGACACGGACACCAAGCCAGGCAGAAATGC...CACCCTGCCCTGAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGGCTGCCAGCCTGGGGCCAGCTCGGACTCGGGCTGGTGAGCGTGGCTCACCGCTTGCCTGTGCCTTaGTTGCCACCACCAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WRLPAWGQLGLGLVSVAHRLPVP*LPPPIF Trigger: GAAGATTGGTGGTGGCAACAAAGGCACAGGCAAGCG...GTGAGCCACGCTCACCAGCCCGAGTCCGAGCTGGCCCCAGGCTGGCAGCCTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGCTCCAGCCCTGTGGCCCTGCTCACCTGTCTGCCCACTCAGGGCAGGGTGTCGAGGTTGGTCACGTaGAGAACACGCTTGCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGSSPVALLTCLPTQGRVSRLVT*RTRLRF Trigger: GAACCGCAAGCGTGTTCTCAACGTGACCAACCTCGA...CACCCTGCCCTGAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CAA 90 bp | CCACCTGAGATGGCCCACACTCATGACGCCACCCAGGGGCTCAGACAAGCGCTGACGCACAGGCCTGTCTaGTCTTGGCACCGATGGACC | + |
|
Preference number: 5 (lower is better) Translates to: PPEMAHTHDATQGLRQALTHRPV*SWHRWT Trigger: GGTCCATCGGTGCCAAGACAAGACAGGCCTGTGCGT...CAGCGCTTGTCTGAGCCCCTGGGTGGCGTCATGAGTGTGGGCCATCTCAGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS CCA 90 bp | CGGCCAGCCTGGGACCCCGAGAATGTGCCGGCTGCTGTATATTCGTaGTCAGCCAGGCTACTGCTGTGTGATTCAGGTGGGGGCTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RPAWDPENVPAAVYS*SARLLLCDSGGGSG Trigger: ACCTGAGCCCCCACCTGAATCACACAGCAGTAGCCTGGCTGACCACGAATATACAGCAGCCGGCACATTCTCGGGGTCCCAGGCTGGCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGCTCCAGCCCTGTGGCCCTGCTCACCTGTCTGCCCACTCAGGGCAGGGTGTTCTTGAGTGTGGACTaGCCATGGGTTTTCTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGSSPVALLTCLPTQGRVFLSVD*PWVFSQ Trigger: CTGCGAGAAAACCCATGGCAAGTCCACACTCAAGAA...CACCCTGCCCTGAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS-3UTR CAA 90 bp | GGAGACGCGGCTTTCGGGGCGAGTGGGAGGGGCCTCTGTACTGTCCGCTCTGAGTCTGAGAACTCGAGGTaGGTCACGTTGAGAACACGC | + |
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Preference number: 5 (lower is better) Translates to: GDAAFGASGRGLCTVRSESENSR*VTLRTR Trigger: GCGTGTTCTCAACGTGACCAACCTCGAGTTCTCAGA...CTCAGAGCGGACAGTACAGAGGCCCCTCCCACTCGCCCCGAAAGCCGCGTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS-3UTR CAA 90 bp | GGAGACGCGGCTTTCGGGGCGAGTGGGAGGGGCCTCTGTACTGTCCGCTCTGAGGGAGCCGGCTTCCTTTaGGTGTTCTTCTTCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GDAAFGASGRGLCTVRSEGAGFL*VFFFFL Trigger: CAGGAAGAAGAAGAACACCAAAAGGAAGCCGGCTCC...CTCAGAGCGGACAGTACAGAGGCCCCTCCCACTCGCCCCGAAAGCCGCGTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS-3UTR CAA 90 bp | CACCCAGGGGCTCAGACAAGCGCTGCCGTGCTGGCTCCAGCCCTGTGGCCCTGCTTGCAGTCTTTCTGTTaGGTAACGTCTGTCACATCC | + |
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Preference number: 5 (lower is better) Translates to: HPGAQTSAAVLAPALWPCLQSFC*VTSVTS Trigger: GGATGTGACAGACGTTACCAAACAGAAAGACTGCAA...GCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGCTTGTCTGAGCCCCTGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS-3UTR CAA 90 bp | AAACCCAGCCCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATGGCCCACATCAAGCAGGTCTAGGTaGGGGATGGTGGGTGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: KPSPSVSMGGHHHLRWPTSSRSR*GMVGEA Trigger: AGCCTCACCCACCATCCCCAACCTAGACCTGCTTGA...TGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGGGCTGGGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS GCA 90 bp | CCGAGAATGTGCCGGCTGCTGTATATTCGTGGTCAGCCAGGCTACTaGTGTGTGATTCAGGTGGGGGCTCAGGTGAGCTGCCCTCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: PRMCRLLYIRGQPGY*CVIQVGAQVSCPPV Trigger: CACAGGAGGGCAGCTCACCTGAGCCCCCACCTGAATCACACAGCAGTAGCCTGGCTGACCACGAATATACAGCAGCCGGCACATTCTCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS-3UTR CAA 90 bp | AAACCCAGCCCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATGGCCCACATTTCCAAGCCTTTGCTaGGCGGTGGCCATGCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KPSPSVSMGGHHHLRWPTFPSLC*AVAMPF Trigger: AAAGGGCATGGCCACCGCCAAGCAAAGGCTTGGAAA...TGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGGGCTGGGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS-3UTR CAA 90 bp | GATGTGTGTGACACCCATTACCTAGCCTGCTACCTGCCAGCCAGGGAGCTGGGGTTGGCAGCAGTGTTGTaGGGGGATGATGCAGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: DVCDTHYLACYLPARELGLAAVL*GDDAEG Trigger: GCCTTCTGCATCATCCCCCAACAACACTGCTGCCAA...CCCCAGCTCCCTGGCTGGCAGGTAGCAGGCTAGGTAATGGGTGTCACACACATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS-3UTR CAA 90 bp | AGCCCCGGGCCCTGGGGATGGCGTCCCTCCAAACAGGTCAAGTGGGAGTGGATATTCTTGCTCCCATCTTaGAGCTTCAGAGTTTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: SPGPWGWRPSKQVKWEWIFLLPS*SFRVLG Trigger: CCCCAAAACTCTGAAGCTCAAAGATGGGAGCAAGAA...TATCCACTCCCACTTGACCTGTTTGGAGGGACGCCATCCCCAGGGCCCGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS-3UTR CAA 90 bp | CCACCTGAGATGGCCCACACTCATGACGCCACCCAGGGGCTCAGACAAGCGCTGTTTGTACGTTTTCCTTaGGCAGCAGTGTTGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPEMAHTHDATQGLRQALFVRFP*AAVLLG Trigger: CCCCAACAACACTGCTGCCAAAGGAAAACGTACAAA...CAGCGCTTGTCTGAGCCCCTGGGTGGCGTCATGAGTGTGGGCCATCTCAGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS-3UTR CAA 90 bp | TCCCTCCAAACAGGTCAAGTGGGAGTGGATAAGGCCTCCGCCAAGCTGCATCTCGGGGGCTTGGGAATTTaGGATGGCTTGGGCATCTTC | + |
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Preference number: 5 (lower is better) Translates to: SLQTGQVGVDKASAKLHLGGLGI*DGLGIF Trigger: GAAGATGCCCAAGCCATCCAAAATTCCCAAGCCCCC...GAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGACCTGTTTGGAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS-3UTR CAA 90 bp | TCCCTCCAAACAGGTCAAGTGGGAGTGGATAAGGCCTCCGCCAAGCTGCATCTCAAGGACAAGTCCCTTTaGGGGGCGCTCTTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLQTGQVGVDKASAKLHLKDKSL*GALFFL Trigger: GAGGAAGAAGAGCGCCCCCAAAAGGGACTTGTCCTT...GAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGACCTGTTTGGAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CCA 90 bp | TCTTGGTCAGCGCCTCCTTTGTGTGAGCCTCAAGCAGGTCTAGGTTaGGGATGGTGGGTGAGGCTGACTCCTTGCACTTCTTCCCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SWSAPPLCEPQAGLG*GWWVRLTPCTSSLS Trigger: AGAAAGGGAAGAAGTGCAAGGAGTCAGCCTCACCCACCATCCCCAACCTAGACCTGCTTGAGGCTCACACAAAGGAGGCGCTGACCAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS-3UTR CAA 90 bp | CCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATGGCCCACACTCATGACGAAAGAAAAGGAAAACTaGTCCTTGTTCCCAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PSVSMGGHHHLRWPTLMTKEKEN*SLFPAR Trigger: CCTGGCTGGGAACAAGGACAAGTTTTCCTTTTCTTT...CGTCATGAGTGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS GCA 90 bp | TTCTGCACTGGTTTCACGTCCGGTGTTGGCCCAGGGCCGTGTTTGTaGCAAGTCCGCTTTTTCTTGAGTGTGGACTTGCCATGGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FCTGFTSGVGPGPCL*QVRFFLSVDLPWVF Trigger: GAAAACCCATGGCAAGTCCACACTCAAGAAAAAGCGGACTTGGCACAAACACGGCCCTGGGCCAACACCGGACGTGAAACCAGTGCAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS-3UTR CAA 90 bp | TCCCTCCAAACAGGTCAAGTGGGAGTGGATAAGGCCTCCGCCAAGCTGCATCTCCAAGTCCGCTTTTTCTaGAGTGTGGACTTGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SLQTGQVGVDKASAKLHLQVRFF*SVDLPW Trigger: CCATGGCAAGTCCACACTCAAGAAAAAGCGGACTTG...GAGATGCAGCTTGGCGGAGGCCTTATCCACTCCCACTTGACCTGTTTGGAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS-3UTR CAA 90 bp | AAACCCAGCCCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATGGCCCACATCAGGTTTGCTGTTCTaGTATTTCCACTTGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KPSPSVSMGGHHHLRWPTSGLLF*YFHLAS Trigger: AGAAGCCAAGTGGAAATACAAGAACAGCAAACCTGA...TGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGGGCTGGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS-3UTR CAA 90 bp | AGGGTGCCTTGGCCTAGAAGTGCTGTTTCAGAGTGGGGCCCCTCCACGTGGCTTAGTAACGAGTCAGGTTaGCTGTTCTTGTATTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RVPWPRSAVSEWGPSTWLSNESG*LFLYFH Trigger: GTGGAAATACAAGAACAGCAAACCTGACTCGTTACT...AAGCCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS TCA 90 bp | CGCTCTTGTACACCGCAGAATCCAGCTTTGGCTTCGAGGTGGGCATaGGGAGAGCCTCCTTCTTGTCTAACAAGAAGGACAAGTCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RSCTPQNPALASRWA*GEPPSCLTRRTSPF Trigger: AAAGGGACTTGTCCTTCTTGTTAGACAAGAAGGAGGCTCTCCTCATGCCCACCTCGAAGCCAAAGCTGGATTCTGCGGTGTACAAGAGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS-3UTR CAA 90 bp | AAACCCAGCCCCTCCGTGTCGATGGGTGGACACCACCACCTGAGATGGCCCACATCTTTCAGCTTCATTTaGCAGTCTTTCTGTTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KPSPSVSMGGHHHLRWPTSFSFI*QSFCLV Trigger: TACCAAACAGAAAGACTGCAAAATGAAGCTGAAAGA...TGTGGGCCATCTCAGGTGGTGGTGTCCACCCATCGACACGGAGGGGCTGGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CCA 90 bp | TTTCCAGCCTTTCCATGTCATTCTGCGTGTGGACTGTGTCCTTATTaGGAACACTCAGGACGCTCTTTGGGGTCTTCCCTTTCTTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FPAFPCHSACGLCPY*EHSGRSLGSSLSSV Trigger: CACCGAAGAAAGGGAAGACCCCAAAGAGCGTCCTGAGTGTTCCCAATAAGGACACAGTCCACACGCAGAATGACATGGAAAGGCTGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS TCA 90 bp | CAAAGCTGGACATTCTGGTGTCTGAGAACTCGAGGTTGGTCACGTTaGGAACACGCTTGCGGTTCGTGCTATAGTAATAGTCCACGAATT | + |
|
Preference number: 5 (lower is better) Translates to: QSWTFWCLRTRGWSR*EHACGSCYSNSPRI Trigger: AATTCGTGGACTATTACTATAGCACGAACCGCAAGCGTGTTCTCAACGTGACCAACCTCGAGTTCTCAGACACCAGAATGTCCAGCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS GCA 72 bp | CTGCTCCTCCTGCTGGGACAGCTTGGCTGCAGCAGCTaGCAGCCCCGTCTCAATGGAGGCCACTCTGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LLLLLGQLGCSS*QPRLNGGHSGP Trigger: GGGACCAGAGTGGCCTCCATTGAGACGGGGCTGGCAGCTGCTGCAGCCAAGCTGTCCCAGCAGGAGGAGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS GCA 72 bp | GCTGGGAGGCACGGCCAGCCTGGGACCCCGAGAATGTaGCGGCTGCTGTATATTCGTGGTCAGCCAGGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: AGRHGQPGTPRM*RLLYIRGQPGY Trigger: GTAGCCTGGCTGACCACGAATATACAGCAGCCGGCACATTCTCGGGGTCCCAGGCTGGCCGTGCCTCCCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CCA 72 bp | CCCCTCACGCACAGGCCTGTCTTGTCTTGGCACCGATaGACCGACCCTGGCTGTGGGGCTGTACGGAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: PLTHRPVLSWHR*TDPGCGAVRSI Trigger: GATGCTCCGTACAGCCCCACAGCCAGGGTCGGTCCATCGGTGCCAAGACAAGACAGGCCTGTGCGTGAGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS GCA 72 bp | GGCACGGCCAGCCTGGGACCCCGAGAATGTGCCGGCTaGTGTATATTCGTGGTCAGCCAGGCTACTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GTASLGPRECAG*CIFVVSQATAV Trigger: CACAGCAGTAGCCTGGCTGACCACGAATATACAGCAGCCGGCACATTCTCGGGGTCCCAGGCTGGCCGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CCA 72 bp | CACTCTGGTCCCCTCACGCACAGGCCTGTCTTGTCTTaGCACCGATGGACCGACCCTGGCTGTGGGGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: HSGPLTHRPVLS*HRWTDPGCGAV Trigger: TACAGCCCCACAGCCAGGGTCGGTCCATCGGTGCCAAGACAAGACAGGCCTGTGCGTGAGGGGACCAGAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CCA 72 bp | TCTTCCTGTTTTTCTGCTCCTCCTGCTGGGACAGCTTaGCTGCAGCAGCTGCCAGCCCCGTCTCAATGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSCFSAPPAGTA*LQQLPAPSQWR Trigger: CCTCCATTGAGACGGGGCTGGCAGCTGCTGCAGCCAAGCTGTCCCAGCAGGAGGAGCAGAAAAACAGGAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CCA 72 bp | GCGCCTCCTTTGTGTGAGCCTCAAGCAGGTCTAGGTTaGGGATGGTGGGTGAGGCTGACTCCTTGCACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: APPLCEPQAGLG*GWWVRLTPCTS Trigger: AGAAGTGCAAGGAGTCAGCCTCACCCACCATCCCCAACCTAGACCTGCTTGAGGCTCACACAAAGGAGGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CAA 72 bp | GCTGACTGCCATTCTGCACTGGTTTCACGTCCGGTGTaGGCCCAGGGCCGTGTTTGTGCCAAGTCCGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ADCHSALVSRPV*AQGRVCAKSAF Trigger: AAAAGCGGACTTGGCACAAACACGGCCCTGGGCCAACACCGGACGTGAAACCAGTGCAGAATGGCAGTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS GCA 72 bp | GGTTTCACGTCCGGTGTTGGCCCAGGGCCGTGTTTGTaGCAAGTCCGCTTTTTCTTGAGTGTGGACTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GFTSGVGPGPCL*QVRFFLSVDLP Trigger: TGGCAAGTCCACACTCAAGAAAAAGCGGACTTGGCACAAACACGGCCCTGGGCCAACACCGGACGTGAAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CCA 72 bp | CAGCTCCTTGATGAACAGCTGACTGCCATTCTGCACTaGTTTCACGTCCGGTGTTGGCCCAGGGCCGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: QLLDEQLTAILH*FHVRCWPRAVF Trigger: AAACACGGCCCTGGGCCAACACCGGACGTGAAACCAGTGCAGAATGGCAGTCAGCTGTTCATCAAGGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CAA 72 bp | ACTGGTTTCACGTCCGGTGTTGGCCCAGGGCCGTGTTaGTGCCAAGTCCGCTTTTTCTTGAGTGTGGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: TGFTSGVGPGPC*CQVRFFLSVDL Trigger: CAAGTCCACACTCAAGAAAAAGCGGACTTGGCACAAACACGGCCCTGGGCCAACACCGGACGTGAAACCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CAA 72 bp | GAGGAGGCGGCAGCGTTTACTTCAGGTCGGACAGTTTaGGAGGCATTCTCACTGAGCCTGATCTCTTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: EEAAAFTSGRTV*EAFSLSLISLA Trigger: GGCCAAAGAGATCAGGCTCAGTGAGAATGCCTCCAAAACTGTCCGACCTGAAGTAAACGCTGCCGCCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CAA 72 bp | ATGTGCAGAGAGCCCTCGTCAGAGGAGTCATCGCTCTaGTACACCGCAGAATCCAGCTTTGGCTTCGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: MCREPSSEESSL*YTAESSFGFEV Trigger: CACCTCGAAGCCAAAGCTGGATTCTGCGGTGTACAAGAGCGATGACTCCTCTGACGAGGGCTCTCTGCACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CAA 72 bp | GCCCCACATAGTTCTCCACATCACTCACGTAGAATGTaGGGGCAGGGACAGCTAAGCCCAGGCCATCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: APHSSPHHSRRM*GQGQLSPGHLS Trigger: AGAAAGATGGCCTGGGCTTAGCTGTCCCTGCCCCAACATTCTACGTGAGTGATGTGGAGAACTATGTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CAA 72 bp | GGACTGTGTCCTTATTGGGAACACTCAGGACGCTCTTaGGGGTCTTCCCTTTCTTCGGTGGCTCCATCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GLCPYWEHSGRS*GSSLSSVAPSW Trigger: CCAAGATGGAGCCACCGAAGAAAGGGAAGACCCCAAAGAGCGTCCTGAGTGTTCCCAATAAGGACACAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CAA 72 bp | TTTGGCTTCGAGGTGGGCATGAGGAGAGCCTCCTTCTaGTCTAACAAGAAGGACAAGTCCCTTTTGGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: FGFEVGMRRASF*SNKKDKSLLGA Trigger: CGCCCCCAAAAGGGACTTGTCCTTCTTGTTAGACAAGAAGGAGGCTCTCCTCATGCCCACCTCGAAGCCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CAA 90 bp | GAATCCAGCTTTGGCTTCGAGGTGGGCATGAGGAGAGCCTCCTTCTaGTCTAACAAGAAGGACAAGTCCCTTTTGGGGGCGCTCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ESSFGFEVGMRRASF*SNKKDKSLLGALFF Trigger: GAAGAAGAGCGCCCCCAAAAGGGACTTGTCCTTCTTGTTAGACAAGAAGGAGGCTCTCCTCATGCCCACCTCGAAGCCAAAGCTGGATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS TCA 72 bp | ACACCGCAGAATCCAGCTTTGGCTTCGAGGTGGGCATaGGGAGAGCCTCCTTCTTGTCTAACAAGAAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: TPQNPALASRWA*GEPPSCLTRRT Trigger: TGTCCTTCTTGTTAGACAAGAAGGAGGCTCTCCTCATGCCCACCTCGAAGCCAAAGCTGGATTCTGCGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS TCA 72 bp | CAGACTCCAGTGAGGGGTAAACATAGTCTGAGTCCTTaGAGCAGGCATCCAGGTGATCCTGCTCCTCGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: QTPVRGKHSLSP*SRHPGDPAPRS Trigger: ACTACGAGGAGCAGGATCACCTGGATGCCTGCTTCAAGGACTCAGACTATGTTTACCCCTCACTGGAGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS TCA 72 bp | TGTACGTTTTCCTTTGGCAGCAGTGTTGTTGGGGGATaGTGCAGAAGGCCGCCTCTGTGTGAGAAAGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: CTFSFGSSVVGG*CRRPPLCEKDS Trigger: GGAGTCTTTCTCACACAGAGGCGGCCTTCTGCATCATCCCCCAACAACACTGCTGCCAAAGGAAAACGTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CAA 72 bp | ACAAAGCTGGACATTCTGGTGTCTGAGAACTCGAGGTaGGTCACGTTGAGAACACGCTTGCGGTTCGTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: TKLDILVSENSR*VTLRTRLRFVL Trigger: TAGCACGAACCGCAAGCGTGTTCTCAACGTGACCAACCTCGAGTTCTCAGACACCAGAATGTCCAGCTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CAA 72 bp | CTTTCCATGTCATTCTGCGTGTGGACTGTGTCCTTATaGGGAACACTCAGGACGCTCTTTGGGGTCTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSMSFCVWTVSL*GTLRTLFGVFP Trigger: AGGGAAGACCCCAAAGAGCGTCCTGAGTGTTCCCAATAAGGACACAGTCCACACGCAGAATGACATGGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS CCA 72 bp | TTTCCATGTCATTCTGCGTGTGGACTGTGTCCTTATTaGGAACACTCAGGACGCTCTTTGGGGTCTTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FPCHSACGLCPY*EHSGRSLGSSL Trigger: AAGGGAAGACCCCAAAGAGCGTCCTGAGTGTTCCCAATAAGGACACAGTCCACACGCAGAATGACATGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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| CDS TCA 72 bp | ACATTCTGGTGTCTGAGAACTCGAGGTTGGTCACGTTaGGAACACGCTTGCGGTTCGTGCTATAGTAATAGT | + |
|
Preference number: 6 (lower is better) Translates to: TFWCLRTRGWSR*EHACGSCYSNS Trigger: ACTATTACTATAGCACGAACCGCAAGCGTGTTCTCAACGTGACCAACCTCGAGTTCTCAGACACCAGAATGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035540.9 |
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