Pregenerated sensors for PHF19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026873Ensembl transcript IDs: ENSMUST00000028232.7, ENSMUST00000202907.2
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCACCAGGCCCCACTTTGGGACCTCAGTGGCGGCAGCTGTGGGACTaGCAACTGGGCCCAGTGTCCATCTGCTTATCCCTGCCTGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: PPGPTLGPQWRQLWD*QLGPVSICLSLPEP Trigger: GGGCTCAGGCAGGGATAAGCAGATGGACACTGGGCCCAGTTGTCAGTCCCACAGCTGCCGCCACTGAGGTCCCAAAGTGGGGCCTGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR GCA 90 bp | CCACCACCCCAAGCCTGGCGAAAACAGGGACCCAGTGGCCTCTTCTaGCCCTCCTTTGGTTTGCAGGGATCTGGGCAGCCTCTGAGGGTA | + |
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Preference number: 1 (lower is better) Translates to: PPPQAWRKQGPSGLF*PSFGLQGSGQPLRV Trigger: TACCCTCAGAGGCTGCCCAGATCCCTGCAAACCAAAGGAGGGGCAGAAGAGGCCACTGGGTCCCTGTTTTCGCCAGGCTTGGGGTGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CCA 90 bp | TTCTTGTCCCTTCTGCAGAGACCCAGCTCACCACTCCCCAGACTCTaGGTCCTAGGCATCCTAAACTTTCTCAGGCACCCCCTACCTTCC | + |
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Preference number: 1 (lower is better) Translates to: FLSLLQRPSSPLPRL*VLGILNFLRHPLPS Trigger: GGAAGGTAGGGGGTGCCTGAGAAAGTTTAGGATGCCTAGGACCCAGAGTCTGGGGAGTGGTGAGCTGGGTCTCTGCAGAAGGGACAAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CCA 90 bp | TCTGTGGGGCCAAGGCTGCTTCACAGGCCAGAGGAGGCAGGGGTTTaGTTCTCACATTTAACTGCAGCATGTATCCCTGGAAGAGGCCAA | + |
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Preference number: 1 (lower is better) Translates to: SVGPRLLHRPEEAGV*FSHLTAACIPGRGQ Trigger: TTGGCCTCTTCCAGGGATACATGCTGCAGTTAAATGTGAGAACCAAACCCCTGCCTCCTCTGGCCTGTGAAGCAGCCTTGGCCCCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CCA 90 bp | GGCCCTGGCAGGAGTAGGTGGTGGCTGTACACACAGTGTTTGGGATaGGATTTAATCTGGCTTAGTCTTCTTCCCCATCCTTTCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: GPGRSRWWLYTQCLG*DLIWLSLLPHPFLP Trigger: TGGGAGGAAAGGATGGGGAAGAAGACTAAGCCAGATTAAATCCCATCCCAAACACTGTGTGTACAGCCACCACCTACTCCTGCCAGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR TCA 90 bp | GGGGTCAGACCTAGTCATGGGAATATCAGCACCTTTGGTATAGTCTaGTGTCACCATGTGGTCCATCTTCCCACCCCCAGCTGGAAGCTA | + |
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Preference number: 1 (lower is better) Translates to: GVRPSHGNISTFGIV*CHHVVHLPTPSWKL Trigger: TAGCTTCCAGCTGGGGGTGGGAAGATGGACCACATGGTGACATCAGACTATACCAAAGGTGCTGATATTCCCATGACTAGGTCTGACCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CCA 90 bp | AGTAGGTGGTGGCTGTACACACAGTGTTTGGGATGGGATTTAATCTaGCTTAGTCTTCTTCCCCATCCTTTCCTCCCAGATCTGTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: SRWWLYTQCLGWDLI*LSLLPHPFLPDLCV Trigger: AACACACAGATCTGGGAGGAAAGGATGGGGAAGAAGACTAAGCCAGATTAAATCCCATCCCAAACACTGTGTGTACAGCCACCACCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR GCA 90 bp | CCCAACTCTCCTTCCACCAGGCCCCACTTTGGGACCTCAGTGGCGGCAGCTGTGTCAGTCTGGTGCCCTTaGCTCCCACTTCAATGGCAG | + |
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Preference number: 2 (lower is better) Translates to: PNSPSTRPHFGTSVAAAVSVWCP*LPLQWQ Trigger: CTGCCATTGAAGTGGGAGGCAAGGGCACCAGACTGA...CACAGCTGCCGCCACTGAGGTCCCAAAGTGGGGCCTGGTGGAAGGAGAGTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR CCA 90 bp | CCCAACTCTCCTTCCACCAGGCCCCACTTTGGGACCTCAGTGGCGGCAGCTGTGAAAACAGGGACCCAGTaGCCTCTTCTGCCCCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: PNSPSTRPHFGTSVAAAVKTGTQ*PLLPLL Trigger: AAGGAGGGGCAGAAGAGGCCACTGGGTCCCTGTTTT...CACAGCTGCCGCCACTGAGGTCCCAAAGTGGGGCCTGGTGGAAGGAGAGTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR GCA 90 bp | ATTTTGTGCTTCTCTGTGGGGCCAAGGCTGCTTCACAGGCCAGAGGAGGCAGGGGCCCCTCCTTTGGTTTaGAGGGATCTGGGCAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: ILCFSVGPRLLHRPEEAGAPPLV*RDLGSL Trigger: GAGGCTGCCCAGATCCCTGCAAACCAAAGGAGGGGC...CCCTGCCTCCTCTGGCCTGTGAAGCAGCCTTGGCCCCACAGAGAAGCACAAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGGCCCTGGCAGGAGTAGGTGGTGGCTGTACACACAGTGTTTGGGATGGGCTTCTGCCCCTCCTTTaGTTTGCAGGGATCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: QGALAGVGGGCTHSVWDGLLPLL*FAGIWA Trigger: TGCCCAGATCCCTGCAAACCAAAGGAGGGGCAGAAG...CCCATCCCAAACACTGTGTGTACAGCCACCACCTACTCCTGCCAGGGCCCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR CCA 90 bp | GCACCCCTCCTGCCTTCCTGCTCCTCAGGCCCAGAGCTTCTGGGGCACAGCAGAAACAGATCCAGGGGTTaGAGCCAGGATACTGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: APLLPSCSSGPELLGHSRNRSRG*SQDTVR Trigger: TCTGACAGTATCCTGGCTCCAACCCCTGGATCTGTT...TCTGCTGTGCCCCAGAAGCTCTGGGCCTGAGGAGCAGGAAGGCAGGAGGGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGGCCCTGGCAGGAGTAGGTGGTGGCTGTACACACAGTGTTTGGGATGGGGGACAGGCAAACTTCTaGAAACCTTGGCCCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: QGALAGVGGGCTHSVWDGGQANF*KPWPCL Trigger: CAGGCAGGGCCAAGGTTTCCAGAAGTTTGCCTGTCC...CCCATCCCAAACACTGTGTGTACAGCCACCACCTACTCCTGCCAGGGCCCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CAA 90 bp | TCAGCTCCAGGGCAAGGCAGGAGCCATGCAGGAGAGGGGTATATTTaGTGCTTCTCTGTGGGGCCAAGGCTGCTTCACAGGCCAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: SAPGQGRSHAGEGYI*CFSVGPRLLHRPEE Trigger: CTCCTCTGGCCTGTGAAGCAGCCTTGGCCCCACAGAGAAGCACAAAATATACCCCTCTCCTGCATGGCTCCTGCCTTGCCCTGGAGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR CCA 90 bp | CAGATGGGTGTATGCCCGTGGAAGATGTGTGTCCACACAAAACACCTGAAAGGGGCAGCACACAGGCCTTaGCCTGGCAGGCAGCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: QMGVCPWKMCVHTKHLKGAAHRP*PGRQQA Trigger: TGCCTGCTGCCTGCCAGGCCAAGGCCTGTGTGCTGC...CCCTTTCAGGTGTTTTGTGTGGACACACATCTTCCACGGGCATACACCCATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGGCCCTGGCAGGAGTAGGTGGTGGCTGTACACACAGTGTTTGGGATGGGACGAGAGAATACCAATaGGGTCTCAGAGACTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: QGALAGVGGGCTHSVWDGTREYQ*GLRDSG Trigger: ACCTGAGTCTCTGAGACCCCATTGGTATTCTCTCGT...CCCATCCCAAACACTGTGTGTACAGCCACCACCTACTCCTGCCAGGGCCCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR GCA 90 bp | GCTTCACAGGCCAGAGGAGGCAGGGGTTTGGTTCTCACATTTAACTGCAGCATGCCCAGTGGCCTCTTCTaGCCCTCCTTTGGTTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: ASQARGGRGLVLTFNCSMPSGLF*PSFGLQ Trigger: CTGCAAACCAAAGGAGGGGCAGAAGAGGCCACTGGG...CATGCTGCAGTTAAATGTGAGAACCAAACCCCTGCCTCCTCTGGCCTGTGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CAA 90 bp | TCTATGCAGCAGGGCCAGGTCCCAATCCTTGACAACAGTAAAGGGTaGTTGCTGGGACAGGCAAACTTCTGGAAACCTTGGCCCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SMQQGQVPILDNSKG*LLGQANFWKPWPCL Trigger: CAGGCAGGGCCAAGGTTTCCAGAAGTTTGCCTGTCCCAGCAACAACCCTTTACTGTTGTCAAGGATTGGGACCTGGCCCTGCTGCATAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CAA 90 bp | CCAGGGGGCCCTGGCAGGAGTAGGTGGTGGCTGTACACACAGTGTTaGGGATGGGATTTAATCTGGCTTAGTCTTCTTCCCCATCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: PGGPGRSRWWLYTQC*GWDLIWLSLLPHPF Trigger: GAAAGGATGGGGAAGAAGACTAAGCCAGATTAAATCCCATCCCAAACACTGTGTGTACAGCCACCACCTACTCCTGCCAGGGCCCCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR CCA 90 bp | TGTGCTTCTCTGTGGGGCCAAGGCTGCTTCACAGGCCAGAGGAGGCAGGGGTTTGGATGGGATTTAATCTaGCTTAGTCTTCTTCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: CASLWGQGCFTGQRRQGFGWDLI*LSLLPH Trigger: ATGGGGAAGAAGACTAAGCCAGATTAAATCCCATCC...AAACCCCTGCCTCCTCTGGCCTGTGAAGCAGCCTTGGCCCCACAGAGAAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR TCA 90 bp | GGAACCAACGATTCAGGCCCTTGTAAACTCCAAACCTGTCCCCAAAGTGATTGTCTAGTGAGGACCCAGTaGAGCATGCCCAGTGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GTNDSGPCKLQTCPQSDCLVRTQ*SMPSEG Trigger: TCCCTCACTGGGCATGCTTCACTGGGTCCTCACTAG...ACAATCACTTTGGGGACAGGTTTGGAGTTTACAAGGGCCTGAATCGTTGGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR CCA 90 bp | GGAACCAACGATTCAGGCCCTTGTAAACTCCAAACCTGTCCCCAAAGTGATTGTTGCAGCATGTATCCCTaGAAGAGGCCAAGGACGGGG | + |
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Preference number: 2 (lower is better) Translates to: GTNDSGPCKLQTCPQSDCCSMYP*KRPRTG Trigger: CCCCGTCCTTGGCCTCTTCCAGGGATACATGCTGCA...ACAATCACTTTGGGGACAGGTTTGGAGTTTACAAGGGCCTGAATCGTTGGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR CCA 90 bp | CCAAAATCTTTTCAAAGGTGCACAGGGTTATACCATCAGTTGGCAGTAATGCAGCACCAGGCCCCACTTTaGGACCTCAGTGGCGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: PKSFQRCTGLYHQLAVMQHQAPL*DLSGGS Trigger: GCTGCCGCCACTGAGGTCCCAAAGTGGGGCCTGGTG...CTGCATTACTGCCAACTGATGGTATAACCCTGTGCACCTTTGAAAAGATTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CAA 90 bp | TGTGTGTTTAAGACACGTCTATGCAGCAGGGCCAGGTCCCAATCCTaGACAACAGTAAAGGGTTGTTGCTGGGACAGGCAAACTTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: CVFKTRLCSRARSQS*TTVKGCCWDRQTSG Trigger: TCCAGAAGTTTGCCTGTCCCAGCAACAACCCTTTACTGTTGTCAAGGATTGGGACCTGGCCCTGCTGCATAGACGTGTCTTAAACACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CAA 90 bp | GGGCTCCCTGCCCACCTCCTGGTTTCTCCCCAGACACGGCTAAGCTaGACCATTCTAAGAATTCTATTTGTACCATTGATGACAAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: GLPAHLLVSPQTRLS*TILRILFVPLMTKP Trigger: AGGCTTTGTCATCAATGGTACAAATAGAATTCTTAGAATGGTCAAGCTTAGCCGTGTCTGGGGAGAAACCAGGAGGTGGGCAGGGAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR GCA 90 bp | CCAAAATCTTTTCAAAGGTGCACAGGGTTATACCATCAGTTGGCAGTAATGCAGGGCCCAGTGTCCATCTaGTTATCCCTGCCTGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: PKSFQRCTGLYHQLAVMQGPVSI*LSLPEP Trigger: GGGCTCAGGCAGGGATAAGCAGATGGACACTGGGCC...CTGCATTACTGCCAACTGATGGTATAACCCTGTGCACCTTTGAAAAGATTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CAA 90 bp | CAGACACGGCTAAGCTTGACCATTCTAAGAATTCTATTTGTACCATaGATGACAAAGCCTTCCTTTCTGAAGGGAACCAACGATTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: QTRLSLTILRILFVP*MTKPSFLKGTNDSG Trigger: GCCTGAATCGTTGGTTCCCTTCAGAAAGGAAGGCTTTGTCATCAATGGTACAAATAGAATTCTTAGAATGGTCAAGCTTAGCCGTGTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR CCA 90 bp | AAACCAAAATCTTTTCAAAGGTGCACAGGGTTATACCATCAGTTGGCAGTAATGGTAAAGGGTTGTTGCTaGGACAGGCAAACTTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: KPKSFQRCTGLYHQLAVMVKGCC*DRQTSG Trigger: TCCAGAAGTTTGCCTGTCCCAGCAACAACCCTTTAC...CATTACTGCCAACTGATGGTATAACCCTGTGCACCTTTGAAAAGATTTTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CCA 72 bp | GCAGGATGTCCTGTTTCACCACCACCACCCCAAGCCTaGCGAAAACAGGGACCCAGTGGCCTCTTCTGCCCC | + |
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Preference number: 3 (lower is better) Translates to: AGCPVSPPPPQA*RKQGPSGLFCP Trigger: GGGGCAGAAGAGGCCACTGGGTCCCTGTTTTCGCCAGGCTTGGGGTGGTGGTGGTGAAACAGGACATCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CCA 72 bp | TGGGACCTCAGTGGCGGCAGCTGTGGGACTGACAACTaGGCCCAGTGTCCATCTGCTTATCCCTGCCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: WDLSGGSCGTDN*AQCPSAYPCLS Trigger: GCTCAGGCAGGGATAAGCAGATGGACACTGGGCCCAGTTGTCAGTCCCACAGCTGCCGCCACTGAGGTCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR CAA 90 bp | ATGTCACCATGTGGTCCATCTTCCCACCCCCAGCTGGAAGCTACAGCAGCAGTCTGCCCCTCCTTTGGTTaGCAGGGATCTGGGCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: MSPCGPSSHPQLEATAAVCPSFG*QGSGQP Trigger: AGGCTGCCCAGATCCCTGCAAACCAAAGGAGGGGCA...GACTGCTGCTGTAGCTTCCAGCTGGGGGTGGGAAGATGGACCACATGGTGACAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR CAA 90 bp | ATTTTGTGCTTCTCTGTGGGGCCAAGGCTGCTTCACAGGCCAGAGGAGGCAGGGTCTTCTGCCCCTCCTTaGGTTTGCAGGGATCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: ILCFSVGPRLLHRPEEAGSSAPP*VCRDLG Trigger: GCCCAGATCCCTGCAAACCAAAGGAGGGGCAGAAGA...CCCTGCCTCCTCTGGCCTGTGAAGCAGCCTTGGCCCCACAGAGAAGCACAAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR CAA 90 bp | GCACCCCTCCTGCCTTCCTGCTCCTCAGGCCCAGAGCTTCTGGGGCACAGCAGAAACAGTAAAGGGTTGTaGCTGGGACAGGCAAACTTC | + |
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Preference number: 3 (lower is better) Translates to: APLLPSCSSGPELLGHSRNSKGL*LGQANF Trigger: GAAGTTTGCCTGTCCCAGCAACAACCCTTTACTGTT...TCTGCTGTGCCCCAGAAGCTCTGGGCCTGAGGAGCAGGAAGGCAGGAGGGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR GCA 72 bp | ACTGACAACTGGGCCCAGTGTCCATCTGCTTATCCCTaGCTGAGCCCAGACAGGAAGGCAGAGGGAAGTAGG | + |
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Preference number: 3 (lower is better) Translates to: TDNWAQCPSAYP*LSPDRKAEGSR Trigger: CCTACTTCCCTCTGCCTTCCTGTCTGGGCTCAGGCAGGGATAAGCAGATGGACACTGGGCCCAGTTGTCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CCA 72 bp | CTTCTGCAGAGACCCAGCTCACCACTCCCCAGACTCTaGGTCCTAGGCATCCTAAACTTTCTCAGGCACCCC | + |
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Preference number: 3 (lower is better) Translates to: LLQRPSSPLPRL*VLGILNFLRHP Trigger: GGGGTGCCTGAGAAAGTTTAGGATGCCTAGGACCCAGAGTCTGGGGAGTGGTGAGCTGGGTCTCTGCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CCA 72 bp | GCCATGCAGGAGAGGGGTATATTTTGTGCTTCTCTGTaGGGCCAAGGCTGCTTCACAGGCCAGAGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: AMQERGIFCASL*GQGCFTGQRRQ Trigger: CTGCCTCCTCTGGCCTGTGAAGCAGCCTTGGCCCCACAGAGAAGCACAAAATATACCCCTCTCCTGCATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR TCA 72 bp | TTCCCTTCCCTCACTGTGGTCCTAGTGAGGACCCAGTaGAGCATGCCCAGTGAGGGACAGATGGGTGTATGC | + |
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Preference number: 3 (lower is better) Translates to: FPSLTVVLVRTQ*SMPSEGQMGVC Trigger: GCATACACCCATCTGTCCCTCACTGGGCATGCTTCACTGGGTCCTCACTAGGACCACAGTGAGGGAAGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR GCA 72 bp | GCCAGAGGAGGCAGGGGTTTGGTTCTCACATTTAACTaGAGCATGTATCCCTGGAAGAGGCCAAGGACGGGG | + |
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Preference number: 3 (lower is better) Translates to: ARGGRGLVLTFN*SMYPWKRPRTG Trigger: CCCCGTCCTTGGCCTCTTCCAGGGATACATGCTGCAGTTAAATGTGAGAACCAAACCCCTGCCTCCTCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR GCA 72 bp | CTACAGCAGCAGTCAGGGAGGCTAGTCTCAGTCTGGTaGCCTTGCCTCCCACTTCAATGGCAGTTCTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: LQQQSGRLVSVW*PCLPLQWQFFP Trigger: TGGAAAGAACTGCCATTGAAGTGGGAGGCAAGGGCACCAGACTGAGACTAGCCTCCCTGACTGCTGCTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CCA 72 bp | GGGTTGTTGCTGGGACAGGCAAACTTCTGGAAACCTTaGCCCTGCCTGACTTCCTTAGTCTCCCCTCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: GLLLGQANFWKP*PCLTSLVSPPQ Trigger: TTGAGGAGGGGAGACTAAGGAAGTCAGGCAGGGCCAAGGTTTCCAGAAGTTTGCCTGTCCCAGCAACAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR CAA 90 bp | CAGGGGGCCCTGGCAGGAGTAGGTGGTGGCTGTACACACAGTGTTTGGGATGGGGTGTGGAGTGTAGTATaGACAACGAGAGAATACCAA | + |
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Preference number: 3 (lower is better) Translates to: QGALAGVGGGCTHSVWDGVWSVV*TTREYQ Trigger: TTGGTATTCTCTCGTTGTCAATACTACACTCCACAC...CCCATCCCAAACACTGTGTGTACAGCCACCACCTACTCCTGCCAGGGCCCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR-3UTR CAA 90 bp | CAGGGGGCCCTGGCAGGAGTAGGTGGTGGCTGTACACACAGTGTTTGGGATGGGGAACCAATAAAAAGTTaGAGGGGTGTGGAGTGTAGT | + |
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Preference number: 3 (lower is better) Translates to: QGALAGVGGGCTHSVWDGEPIKS*RGVECS Trigger: ACTACACTCCACACCCCTCAAACTTTTTATTGGTTC...CCCATCCCAAACACTGTGTGTACAGCCACCACCTACTCCTGCCAGGGCCCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR TCA 72 bp | GAGAGGCGAGGTTTCTTTGCAAGGCACCATGGTGGCTaGGGTTTAAGGCAGGGGACATCTAACCTACTGCAG | + |
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Preference number: 3 (lower is better) Translates to: ERRGFFARHHGG*GLRQGTSNLLQ Trigger: CTGCAGTAGGTTAGATGTCCCCTGCCTTAAACCTCAGCCACCATGGTGCCTTGCAAAGAAACCTCGCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CCA 72 bp | AGCATGCCCAGTGAGGGACAGATGGGTGTATGCCCGTaGAAGATGTGTGTCCACACAAAACACCTGAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: SMPSEGQMGVCP*KMCVHTKHLKG Trigger: CCCTTTCAGGTGTTTTGTGTGGACACACATCTTCCACGGGCATACACCCATCTGTCCCTCACTGGGCATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CCA 72 bp | CCAAGGCTGCTTCACAGGCCAGAGGAGGCAGGGGTTTaGTTCTCACATTTAACTGCAGCATGTATCCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: PRLLHRPEEAGV*FSHLTAACIPG Trigger: TCCAGGGATACATGCTGCAGTTAAATGTGAGAACCAAACCCCTGCCTCCTCTGGCCTGTGAAGCAGCCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CCA 72 bp | AAGCTACAGCAGCAGTCAGGGAGGCTAGTCTCAGTCTaGTGCCCTTGCCTCCCACTTCAATGGCAGTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: KLQQQSGRLVSV*CPCLPLQWQFF Trigger: AAAGAACTGCCATTGAAGTGGGAGGCAAGGGCACCAGACTGAGACTAGCCTCCCTGACTGCTGCTGTAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR CCA 72 bp | AACTCTGGCTTCCCCAGTGGCCTGGAAAACACGTGTTaGAGGTTGCCATGTTCACTGAAGCCAACAGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: NSGFPSGLENTC*RLPCSLKPTGS Trigger: GCTTCCTGTTGGCTTCAGTGAACATGGCAACCTCCAACACGTGTTTTCCAGGCCACTGGGGAAGCCAGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR GCA 72 bp | GCCAGGTCCCAATCCTTGACAACAGTAAAGGGTTGTTaGTGGGACAGGCAAACTTCTGGAAACCTTGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: ARSQSLTTVKGC*WDRQTSGNLGP Trigger: AGGGCCAAGGTTTCCAGAAGTTTGCCTGTCCCAGCAACAACCCTTTACTGTTGTCAAGGATTGGGACCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| 3UTR GCA 72 bp | TCAATTTCTGTTTCTGTAGGCAAAGTAAGGGCTCCCTaGCCACCTCCTGGTTTCTCCCCAGACACGGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SISVSVGKVRAP*PPPGFSPDTAK Trigger: CTTAGCCGTGTCTGGGGAGAAACCAGGAGGTGGGCAGGGAGCCCTTACTTTGCCTACAGAAACAGAAATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| 3UTR-3UTR CAA 90 bp | AAACCAAAATCTTTTCAAAGGTGCACAGGGTTATACCATCAGTTGGCAGTAATGCCACCAGGCCCCACTTaGGGACCTCAGTGGCGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KPKSFQRCTGLYHQLAVMPPGPT*GPQWRQ Trigger: CTGCCGCCACTGAGGTCCCAAAGTGGGGCCTGGTGG...CATTACTGCCAACTGATGGTATAACCCTGTGCACCTTTGAAAAGATTTTGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| 3UTR TCA 72 bp | CCTAGTCATGGGAATATCAGCACCTTTGGTATAGTCTaGTGTCACCATGTGGTCCATCTTCCCACCCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PSHGNISTFGIV*CHHVVHLPTPS Trigger: GCTGGGGGTGGGAAGATGGACCACATGGTGACATCAGACTATACCAAAGGTGCTGATATTCCCATGACTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| 3UTR CCA 72 bp | AACAGTAAAGGGTTGTTGCTGGGACAGGCAAACTTCTaGAAACCTTGGCCCTGCCTGACTTCCTTAGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: NSKGLLLGQANF*KPWPCLTSLVS Trigger: GGAGACTAAGGAAGTCAGGCAGGGCCAAGGTTTCCAGAAGTTTGCCTGTCCCAGCAACAACCCTTTACTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| 3UTR GCA 72 bp | CTTTCCTCCCAGATCTGTGTGTTTAAGACACGTCTATaGAGCAGGGCCAGGTCCCAATCCTTGACAACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LSSQICVFKTRL*SRARSQSLTTV Trigger: TACTGTTGTCAAGGATTGGGACCTGGCCCTGCTGCATAGACGTGTCTTAAACACACAGATCTGGGAGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| 3UTR CCA 72 bp | GTGTGGAGTGTAGTATTGACAACGAGAGAATACCAATaGGGTCTCAGAGACTCAGGTACAGCAGCACACAGG | + |
|
Preference number: 3 (lower is better) Translates to: VWSVVLTTREYQ*GLRDSGTAAHR Trigger: CCTGTGTGCTGCTGTACCTGAGTCTCTGAGACCCCATTGGTATTCTCTCGTTGTCAATACTACACTCCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| 3UTR CCA 72 bp | AGGAGTAGGTGGTGGCTGTACACACAGTGTTTGGGATaGGATTTAATCTGGCTTAGTCTTCTTCCCCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: RSRWWLYTQCLG*DLIWLSLLPHP Trigger: AGGATGGGGAAGAAGACTAAGCCAGATTAAATCCCATCCCAAACACTGTGTGTACAGCCACCACCTACTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| 3UTR-3UTR CAA 90 bp | AAACCAAAATCTTTTCAAAGGTGCACAGGGTTATACCATCAGTTGGCAGTAATGCAGGAAGCCACAAATTaGACCCCAGTTCCCACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: KPKSFQRCTGLYHQLAVMQEATN*TPVPTS Trigger: GCTTGTGGGAACTGGGGTCAAATTTGTGGCTTCCTG...CATTACTGCCAACTGATGGTATAACCCTGTGCACCTTTGAAAAGATTTTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| 3UTR TCA 72 bp | ACTTCAATGGCAGTTCTTTCCATTTCTCCAACTGAGTaGGTCAATTTCTGTTTCTGTAGGCAAAGTAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TSMAVLSISPTE*VNFCFCRQSKG Trigger: GCCCTTACTTTGCCTACAGAAACAGAAATTGACTCACTCAGTTGGAGAAATGGAAAGAACTGCCATTGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR GCA 90 bp | AGGATCCCCAACGGGACGGGCACCCCTCCTGCCTTCCTGCTCCTCAGGCCCAGACGCCGCCCTTTGCTTTaGTCGCAGGGGCCTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RIPNGTGTPPAFLLLRPRRRPLL*SQGPVH Trigger: GTGCACAGGCCCCTGCGAGCAAAGCAAAGGGCGGCG...TCTGGGCCTGAGGAGCAGGAAGGCAGGAGGGGTGCCCGTCCCGTTGGGGATCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR GCA 90 bp | GCACCCCTCCTGCCTTCCTGCTCCTCAGGCCCAGAGCTTCTGGGGCACAGCAGAATGCCTTCATCCGGCTaGTCAGGACCCACAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: APLLPSCSSGPELLGHSRMPSSG*SGPTAP Trigger: GGGAGCTGTGGGTCCTGAGCAGCCGGATGAAGGCAT...TCTGCTGTGCCCCAGAAGCTCTGGGCCTGAGGAGCAGGAAGGCAGGAGGGGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR TCA 90 bp | CCCAACTCTCCTTCCACCAGGCCCCACTTTGGGACCTCAGTGGCGGCAGCTGTGTCATGGGGGTGCTGGTaGGCTTGCCAAGCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PNSPSTRPHFGTSVAAAVSWGCW*ACQAAG Trigger: TCCTGCAGCTTGGCAAGCTCACCAGCACCCCCATGA...CACAGCTGCCGCCACTGAGGTCCCAAAGTGGGGCCTGGTGGAAGGAGAGTTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR GCA 90 bp | GCACCCCTCCTGCCTTCCTGCTCCTCAGGCCCAGAGCTTCTGGGGCACAGCAGACCAGTTGGCATCAACTaGGATGGGGATGTGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: APLLPSCSSGPELLGHSRPVGIN*DGDVAL Trigger: CAGTGCCACATCCCCATCGCAGTTGATGCCAACTGG...TCTGCTGTGCCCCAGAAGCTCTGGGCCTGAGGAGCAGGAAGGCAGGAGGGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR GCA 90 bp | GGGACCTCAGTGGCGGCAGCTGTGGGACTGACAACTGGGCCCAGTGTCCATCTGCAGCCAGTGCGAAAATaGAGCGTCGGCAGAACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GTSVAAAVGLTTGPSVHLQPVRK*SVGRTN Trigger: ATTGGTTCTGCCGACGCTGCATTTTCGCACTGGCTG...CAGATGGACACTGGGCCCAGTTGTCAGTCCCACAGCTGCCGCCACTGAGGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CCA 90 bp | CTTTGGGACCTCAGTGGCGGCAGCTGTGGGACTGACAACTGGGCCCAGTGTCCAAGCGTTGAGGAGATGTaGCCCTCGTTCTGTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWDLSGGSCGTDNWAQCPSVEEM*PSFCHG Trigger: CCCATGACAGAACGAGGGCCACATCTCCTCAACGCT...TGGACACTGGGCCCAGTTGTCAGTCCCACAGCTGCCGCCACTGAGGTCCCAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR TCA 90 bp | ATTTTGTGCTTCTCTGTGGGGCCAAGGCTGCTTCACAGGCCAGAGGAGGCAGGGTGCAGGAGCTCCCAGTaGTGGTTGACAAAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILCFSVGPRLLHRPEEAGCRSSQ*WLTKAR Trigger: CCTGGCCTTTGTCAACCATCACTGGGAGCTCCTGCA...CCCTGCCTCCTCTGGCCTGTGAAGCAGCCTTGGCCCCACAGAGAAGCACAAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CCA 90 bp | GCGAAAACAGGGACCCAGTGGCCTCTTCTGCCCCTCCTTTGGTTTGCAGGGATCTGCAGACGTCACACTTaGGCTCCTCTCCCGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: AKTGTQWPLLPLLWFAGICRRHT*APLPEH Trigger: GTGTTCCGGGAGAGGAGCCCAAGTGTGACGTCTGCA...GATCCCTGCAAACCAAAGGAGGGGCAGAAGAGGCCACTGGGTCCCTGTTTTCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CCA 90 bp | CAGGGGGCCCTGGCAGGAGTAGGTGGTGGCTGTACACACAGTGTTTGGGATGGGTGGCATCAACTGCGATaGGGATGTGGCACTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGALAGVGGGCTHSVWDGWHQLR*GCGTVG Trigger: ACCAACAGTGCCACATCCCCATCGCAGTTGATGCCA...CCCATCCCAAACACTGTGTGTACAGCCACCACCTACTCCTGCCAGGGCCCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CCA 90 bp | ATGCCCAGTGAGGGACAGATGGGTGTATGCCCGTGGAAGATGTGTGTCCACACAAGTCGTAGGAGAGGCTaGTGGAGGCAGACCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MPSEGQMGVCPWKMCVHTSRRRG*WRQTPR Trigger: CCTCGGGGTCTGCCTCCACCAGCCTCTCCTACGACT...TGTGTGGACACACATCTTCCACGGGCATACACCCATCTGTCCCTCACTGGGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CCA 90 bp | CAGGGGGCCCTGGCAGGAGTAGGTGGTGGCTGTACACACAGTGTTTGGGATGGGATAGAGGACTTGAGGTaGGACAGGGACGAGTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGALAGVGGGCTHSVWDGIEDLR*DRDESS Trigger: AGACGACTCGTCCCTGTCCCACCTCAAGTCCTCTAT...CCCATCCCAAACACTGTGTGTACAGCCACCACCTACTCCTGCCAGGGCCCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR TCA 90 bp | ATTTTGTGCTTCTCTGTGGGGCCAAGGCTGCTTCACAGGCCAGAGGAGGCAGGGGCTCCCAGTGATGGTTaGCAAAGGCCAGGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILCFSVGPRLLHRPEEAGAPSDG*QRPGSP Trigger: AGGAGATCCTGGCCTTTGTCAACCATCACTGGGAGC...CCCTGCCTCCTCTGGCCTGTGAAGCAGCCTTGGCCCCACAGAGAAGCACAAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR GCA 90 bp | ATGTCACCATGTGGTCCATCTTCCCACCCCCAGCTGGAAGCTACAGCAGCAGTCCAGGCGGGACTCGGATaGGCAGTCGGAAGATGCATT | + |
|
Preference number: 4 (lower is better) Translates to: MSPCGPSSHPQLEATAAVQAGLG*AVGRCI Trigger: AATGCATCTTCCGACTGCGCATCCGAGTCCCGCCTG...GACTGCTGCTGTAGCTTCCAGCTGGGGGTGGGAAGATGGACCACATGGTGACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR TCA 90 bp | GCCAAGGCTGCTTCACAGGCCAGAGGAGGCAGGGGTTTGGTTCTCACATTTAACGTCTGTGCTCCAGGCTaGGGTGAAGTCACTACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AKAASQARGGRGLVLTFNVCAPG*GEVTTG Trigger: CCCAGTAGTGACTTCACCTCAGCCTGGAGCACAGAC...GTTAAATGTGAGAACCAAACCCCTGCCTCCTCTGGCCTGTGAAGCAGCCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR TCA 90 bp | GGCGAAAACAGGGACCCAGTGGCCTCTTCTGCCCCTCCTTTGGTTTGCAGGGATACGAGTCGTCTCCACTaGTGCTTTCAAGTGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GENRDPVASSAPPLVCRDTSRLH*CFQVCG Trigger: GCCACACACTTGAAAGCATCAGTGGAGACGACTCGT...ATCCCTGCAAACCAAAGGAGGGGCAGAAGAGGCCACTGGGTCCCTGTTTTCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR GCA 90 bp | AAGACCCCCAAGGTTCCCTTCCCTCACTGTGGTCCTAGTGAGGACCCAGTGAAGACCATTTTCACTGCCTaGAGCGTCTTGGCGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KTPKVPFPHCGPSEDPVKTIFTA*SVLAMA Trigger: CGCCATCGCCAAGACGCTGCAGGCAGTGAAAATGGT...CTTCACTGGGTCCTCACTAGGACCACAGTGAGGGAAGGGAACCTTGGGGGTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CCA 90 bp | CAGACTCTGGGTCCTAGGCATCCTAAACTTTCTCAGGCACCCCCTACCTTCCTGCTGCCTGCAGCGTCTTaGCGATGGCGCCTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTLGPRHPKLSQAPPTFLLPAAS*RWRLSS Trigger: TGAAGAAAGGCGCCATCGCCAAGACGCTGCAGGCAG...CAGGAAGGTAGGGGGTGCCTGAGAAAGTTTAGGATGCCTAGGACCCAGAGTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CCA 90 bp | ATTTTGTGCTTCTCTGTGGGGCCAAGGCTGCTTCACAGGCCAGAGGAGGCAGGGAATATACTGGCTAGGTaGTGGTCTGTGCTCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILCFSVGPRLLHRPEEAGNILAR*WSVLQA Trigger: AGCCTGGAGCACAGACCACCACCTAGCCAGTATATT...CCCTGCCTCCTCTGGCCTGTGAAGCAGCCTTGGCCCCACAGAGAAGCACAAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| 3UTR CAA 72 bp | GCCAAGGCTGCTTCACAGGCCAGAGGAGGCAGGGGTTaGGTTCTCACATTTAACTGCAGCATGTATCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AKAASQARGGRG*VLTFNCSMYPW Trigger: CCAGGGATACATGCTGCAGTTAAATGTGAGAACCAAACCCCTGCCTCCTCTGGCCTGTGAAGCAGCCTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR GCA 90 bp | GCTTCACAGGCCAGAGGAGGCAGGGGTTTGGTTCTCACATTTAACTGCAGCATGGGCCAACCGCCCAGCTaGACCAAAGTAGTTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASQARGGRGLVLTFNCSMGQPPS*TKVVGD Trigger: ATCACCAACTACTTTGGTGCAGCTGGGCGGTTGGCC...CATGCTGCAGTTAAATGTGAGAACCAAACCCCTGCCTCCTCTGGCCTGTGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| 3UTR CAA 72 bp | GGCTTCCCCAGTGGCCTGGAAAACACGTGTTGGAGGTaGCCATGTTCACTGAAGCCAACAGGAAGCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GFPSGLENTCWR*PCSLKPTGSHK Trigger: TTTGTGGCTTCCTGTTGGCTTCAGTGAACATGGCAACCTCCAACACGTGTTTTCCAGGCCACTGGGGAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CCA 90 bp | TGGGTCCTAGGCATCCTAAACTTTCTCAGGCACCCCCTACCTTCCTGGGGTGAGATATACTCTGGGCCTTaGTTACACACGGAGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WVLGILNFLRHPLPSWGEIYSGP*LHTEQK Trigger: CTTCTGCTCCGTGTGTAACCAAGGCCCAGAGTATAT...CTCACCCCAGGAAGGTAGGGGGTGCCTGAGAAAGTTTAGGATGCCTAGGACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CCA 90 bp | CCACTCCCCAGACTCTGGGTCCTAGGCATCCTAAACTTTCTCAGGCACCCCCTACCTCTCAATATACTCTaGGCCTTGGTTACACACGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLPRLWVLGILNFLRHPLPLNIL*ALVTHG Trigger: TCCGTGTGTAACCAAGGCCCAGAGTATATTGAGAGG...TAGGGGGTGCCTGAGAAAGTTTAGGATGCCTAGGACCCAGAGTCTGGGGAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| 3UTR CAA 72 bp | AAGACACGTCTATGCAGCAGGGCCAGGTCCCAATCCTaGACAACAGTAAAGGGTTGTTGCTGGGACAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KTRLCSRARSQS*TTVKGCCWDRQ Trigger: TTGCCTGTCCCAGCAACAACCCTTTACTGTTGTCAAGGATTGGGACCTGGCCCTGCTGCATAGACGTGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CCA 90 bp | AGGGAACCAACGATTCAGGCCCTTGTAAACTCCAAACCTGTCCCCAAAGTGATTCTGAACCTTGCCTTCTaGAGTGACCCTCCGCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: REPTIQALVNSKPVPKVILNLAF*SDPPRQ Trigger: TTGGCGCGGAGGGTCACTCCAGAAGGCAAGGTTCAG...AATCACTTTGGGGACAGGTTTGGAGTTTACAAGGGCCTGAATCGTTGGTTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR TCA 90 bp | TGTGCTTCTCTGTGGGGCCAAGGCTGCTTCACAGGCCAGAGGAGGCAGGGGTTTCCACTTTTTAAACTCTaGATTTCATCCAGTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CASLWGQGCFTGQRRQGFPLFKL*ISSSVK Trigger: CTTCACACTGGATGAAATTCAGAGTTTAAAAAGTGG...AAACCCCTGCCTCCTCTGGCCTGTGAAGCAGCCTTGGCCCCACAGAGAAGCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CCA 90 bp | TTGGCTTCCCAACTCTCCTTCCACCAGGCCCCACTTTGGGACCTCAGTGGCGGCACAGGACCCAGTATTTaGAATTATCTTCAAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LASQLSFHQAPLWDLSGGTGPSI*NYLQKS Trigger: TGACTTTTGAAGATAATTCCAAATACTGGGTCCTGT...GCCGCCACTGAGGTCCCAAAGTGGGGCCTGGTGGAAGGAGAGTTGGGAAGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CCA 90 bp | GGAACCAACGATTCAGGCCCTTGTAAACTCCAAACCTGTCCCCAAAGTGATTGTTGCTGGTTAGTGCGATaGGGCGAGTCCCAATCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTNDSGPCKLQTCPQSDCCWLVR*GESQSS Trigger: ACTCGATTGGGACTCGCCCCATCGCACTAACCAGCA...ACAATCACTTTGGGGACAGGTTTGGAGTTTACAAGGGCCTGAATCGTTGGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| 3UTR CAA 72 bp | CCTGGCAGGAGTAGGTGGTGGCTGTACACACAGTGTTaGGGATGGGATTTAATCTGGCTTAGTCTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRSRWWLYTQC*GWDLIWLSLLP Trigger: GGGAAGAAGACTAAGCCAGATTAAATCCCATCCCAAACACTGTGTGTACAGCCACCACCTACTCCTGCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR TCA 90 bp | TGGGTCCTAGGCATCCTAAACTTTCTCAGGCACCCCCTACCTTCCTGGGGTGAGGAATTTCATCCAGTGTaGAGTCGAATATACTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: WVLGILNFLRHPLPSWGEEFHPV*SRIYWL Trigger: TAGCCAGTATATTCGACTTCACACTGGATGAAATTC...CTCACCCCAGGAAGGTAGGGGGTGCCTGAGAAAGTTTAGGATGCCTAGGACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR TCA 90 bp | AAACCAAAATCTTTTCAAAGGTGCACAGGGTTATACCATCAGTTGGCAGTAATGCCTTGCCTTCTGGAGTaGCCCTCCGCGCCAACACCC | + |
|
Preference number: 4 (lower is better) Translates to: KPKSFQRCTGLYHQLAVMPCLLE*PSAPTP Trigger: GGGTGTTGGCGCGGAGGGTCACTCCAGAAGGCAAGG...CATTACTGCCAACTGATGGTATAACCCTGTGCACCTTTGAAAAGATTTTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR GCA 90 bp | GCCAAGGCTGCTTCACAGGCCAGAGGAGGCAGGGGTTTGGTTCTCACATTTAACGCAACAAACCAGGCTTaGTCTTTCCTTTCTTACGAA | + |
|
Preference number: 4 (lower is better) Translates to: AKAASQARGGRGLVLTFNATNQA*SFLSYE Trigger: TTCGTAAGAAAGGAAAGAGCAAGCCTGGTTTGTTGC...GTTAAATGTGAGAACCAAACCCCTGCCTCCTCTGGCCTGTGAAGCAGCCTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR GCA 90 bp | CAGATGGGTGTATGCCCGTGGAAGATGTGTGTCCACACAAAACACCTGAAAGGGAGGTCTGGCCTGAGCTaGCACTTTTTAAACTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QMGVCPWKMCVHTKHLKGRSGLS*HFLNSE Trigger: TTCAGAGTTTAAAAAGTGGCAGCTCAGGCCAGACCT...CCCTTTCAGGTGTTTTGTGTGGACACACATCTTCCACGGGCATACACCCATCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR GCA 90 bp | AAACCAAAATCTTTTCAAAGGTGCACAGGGTTATACCATCAGTTGGCAGTAATGGCTCGCAGGGGCCTGTaGACTTTGGCTGTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPKSFQRCTGLYHQLAVMARRGL*TLAVSF Trigger: GAAGCTGACAGCCAAAGTGCACAGGCCCCTGCGAGC...CATTACTGCCAACTGATGGTATAACCCTGTGCACCTTTGAAAAGATTTTGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CCA 90 bp | GAGGAACCAATAAAAAGTTTGAGGGGTGTGGAGTGTAGTATTGACAACGAGAGAATACTGGCTAGGTGGTaGTCTGTGCTCCAGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EEPIKSLRGVECSIDNERILARW*SVLQAE Trigger: CTCAGCCTGGAGCACAGACCACCACCTAGCCAGTAT...TCTCTCGTTGTCAATACTACACTCCACACCCCTCAAACTTTTTATTGGTTCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR GCA 90 bp | GAGGAACCAATAAAAAGTTTGAGGGGTGTGGAGTGTAGTATTGACAACGAGAGATTTCCTCACAGCCAGTaGGAAAATGCAGCGTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EEPIKSLRGVECSIDNERFPHSQ*ENAASA Trigger: TGCCGACGCTGCATTTTCGCACTGGCTGTGAGGAAA...TCTCTCGTTGTCAATACTACACTCCACACCCCTCAAACTTTTTATTGGTTCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| 3UTR CAA 72 bp | GGAGCCAGGATACTGTCAGAGGAACCAATAAAAAGTTaGAGGGGTGTGGAGTGTAGTATTGACAACGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GARILSEEPIKS*RGVECSIDNER Trigger: TCTCTCGTTGTCAATACTACACTCCACACCCCTCAAACTTTTTATTGGTTCCTCTGACAGTATCCTGGCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CCA 90 bp | CGGCTAAGCTTGACCATTCTAAGAATTCTATTTGTACCATTGATGACAAAGCCTTCTGAGAAGAAGGTCTaGCCTGAGCTGCCACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLSLTILRILFVPLMTKPSEKKV*PELPLF Trigger: AAAAAGTGGCAGCTCAGGCCAGACCTTCTTCTCAGA...AGGCTTTGTCATCAATGGTACAAATAGAATTCTTAGAATGGTCAAGCTTAGCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| 3UTR CAA 72 bp | CTAAGCTTGACCATTCTAAGAATTCTATTTGTACCATaGATGACAAAGCCTTCCTTTCTGAAGGGAACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLTILRILFVP*MTKPSFLKGTN Trigger: GTTGGTTCCCTTCAGAAAGGAAGGCTTTGTCATCAATGGTACAAATAGAATTCTTAGAATGGTCAAGCTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| 3UTR CAA 72 bp | AAATCTTTTCAAAGGTGCACAGGGTTATACCATCAGTaGGCAGTAATGCAGCTATTATTTTGTAGGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KSFQRCTGLYHQ*AVMQLLFCRSE Trigger: TTCACTCCTACAAAATAATAGCTGCATTACTGCCAACTGATGGTATAACCCTGTGCACCTTTGAAAAGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS GCA 90 bp | GCATTGCTGTCTGAGGCGCAGCGCCCCTCCAGCTCCGCCGCCCTTTaGTTTGCTCGCAGGGGCCTGTGCACTTTGGCTGTCAGCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALLSEAQRPSSSAAL*FARRGLCTLAVSFL Trigger: GAGGAAGCTGACAGCCAAAGTGCACAGGCCCCTGCGAGCAAAGCAAAGGGCGGCGGAGCTGGAGGGGCGCTGCGCCTCAGACAGCAATGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CAA 90 bp | GGGACCTCAGTGGCGGCAGCTGTGGGACTGACAACTGGGCCCAGTGTCCATCTGGGGGTGCTGGTGAGCTaGCCAAGCTGCAGGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTSVAAAVGLTTGPSVHLGVLVS*PSCRSS Trigger: GGAGCTCCTGCAGCTTGGCAAGCTCACCAGCACCCC...CAGATGGACACTGGGCCCAGTTGTCAGTCCCACAGCTGCCGCCACTGAGGTCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CCA 90 bp | CCAGCTCCGCCGCCCTTTGCTTTGCTCGCAGGGGCCTGTGCACTTTaGCTGTCAGCTTCCTCTTGCGGCTGCCTACCGTCCATCTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PAPPPFALLAGACAL*LSASSCGCLPSIWS Trigger: ACTCCAGATGGACGGTAGGCAGCCGCAAGAGGAAGCTGACAGCCAAAGTGCACAGGCCCCTGCGAGCAAAGCAAAGGGCGGCGGAGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CAA 90 bp | GGGACCTCAGTGGCGGCAGCTGTGGGACTGACAACTGGGCCCAGTGTCCATCTGGGGGATGTGGCACTGTaGGTGGTAACCCAGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GTSVAAAVGLTTGPSVHLGDVAL*VVTQAT Trigger: TGTGGCCTGGGTTACCACCAACAGTGCCACATCCCC...CAGATGGACACTGGGCCCAGTTGTCAGTCCCACAGCTGCCGCCACTGAGGTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CAA 90 bp | TGTGCTTCTCTGTGGGGCCAAGGCTGCTTCACAGGCCAGAGGAGGCAGGGGTTTACTGCCTGCAGCGTCTaGGCGATGGCGCCTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CASLWGQGCFTGQRRQGFTACSV*AMAPFF Trigger: GAAGAAAGGCGCCATCGCCAAGACGCTGCAGGCAGT...AAACCCCTGCCTCCTCTGGCCTGTGAAGCAGCCTTGGCCCCACAGAGAAGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CAA 90 bp | GGCGAAAACAGGGACCCAGTGGCCTCTTCTGCCCCTCCTTTGGTTTGCAGGGATACAGCTCCCTCTGCATaGCTGTCTGAGGCGCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GENRDPVASSAPPLVCRDTAPSA*LSEAQR Trigger: GCGCTGCGCCTCAGACAGCAATGCAGAGGGAGCTGT...ATCCCTGCAAACCAAAGGAGGGGCAGAAGAGGCCACTGGGTCCCTGTTTTCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CCA 90 bp | AGGTGGGACAGGGACGAGTCGTCTCCACTGATGCTTTCAAGTGTGTaGCTGTCGATGCCTTCATCCGGCTGCTCAGGACCCACAGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RWDRDESSPLMLSSV*LSMPSSGCSGPTAP Trigger: GGGAGCTGTGGGTCCTGAGCAGCCGGATGAAGGCATCGACAGCCACACACTTGAAAGCATCAGTGGAGACGACTCGTCCCTGTCCCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS TCA 90 bp | ACCCAGGCCACACTTCCCACAGATGAGGATCTCGTTCATAGGCCCTaGAGTCTTCCCCATGCAGACGTCACACTTGGGCTCCTCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TQATLPTDEDLVHRP*SLPHADVTLGLLSR Trigger: CCGGGAGAGGAGCCCAAGTGTGACGTCTGCATGGGGAAGACTTCAGGGCCTATGAACGAGATCCTCATCTGTGGGAAGTGTGGCCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS GCA 90 bp | GCGTCGGCAGAACCAATGAGTGAGGAGGGGCCAGTTGGCATCAACTaGGATGGGGATGTGGCACTGTTGGTGGTAACCCAGGCCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: ASAEPMSEEGPVGIN*DGDVALLVVTQATL Trigger: AAGTGTGGCCTGGGTTACCACCAACAGTGCCACATCCCCATCGCAGTTGATGCCAACTGGCCCCTCCTCACTCATTGGTTCTGCCGACGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS GCA 90 bp | GTCCCAATCGAGTTCCTCCGGCTGGTAGGACAGCACCATTTTCACTaGCTGCAGCGTCTTGGCGATGGCGCCTTTCTTCAAAGCGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: VPIEFLRLVGQHHFH*LQRLGDGAFLQSAT Trigger: GGTGGCGCTTTGAAGAAAGGCGCCATCGCCAAGACGCTGCAGGCAGTGAAAATGGTGCTGTCCTACCAGCCGGAGGAACTCGATTGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS GCA 90 bp | CCACTGATGCTTTCAAGTGTGTGGCTGTCGATGCCTTCATCCGGCTaGTCAGGACCCACAGCTCCCTCTGCATTGCTGTCTGAGGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLMLSSVWLSMPSSG*SGPTAPSALLSEAQ Trigger: CTGCGCCTCAGACAGCAATGCAGAGGGAGCTGTGGGTCCTGAGCAGCCGGATGAAGGCATCGACAGCCACACACTTGAAAGCATCAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS GCA 90 bp | CCGCGCCAACACCCGATATTTTTCCCCGCAGGCCAACCGCCCAGCTaGACCAAAGTAGTTGGTGATAGAGGACTTGAGGTGGGACAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PRQHPIFFPAGQPPS*TKVVGDRGLEVGQG Trigger: TCCCTGTCCCACCTCAAGTCCTCTATCACCAACTACTTTGGTGCAGCTGGGCGGTTGGCCTGCGGGGAAAAATATCGGGTGTTGGCGCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CCA 90 bp | CCTCCGGCTGGTAGGACAGCACCATTTTCACTGCCTGCAGCGTCTTaGCGATGGCGCCTTTCTTCAAAGCGCCACCTTTCCTCACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PPAGRTAPFSLPAAS*RWRLSSKRHLSSQP Trigger: TGGCTGTGAGGAAAGGTGGCGCTTTGAAGAAAGGCGCCATCGCCAAGACGCTGCAGGCAGTGAAAATGGTGCTGTCCTACCAGCCGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CCA 90 bp | CCCTTTGTCACTTGGCATCAACGCCCTGTCGGGAAGCAGTTTTCCTaGAGGGGCAGGCGGGACTCGGATGCGCAGTCGGAAGATGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: PFVTWHQRPVGKQFS*RGRRDSDAQSEDAF Trigger: AAATGCATCTTCCGACTGCGCATCCGAGTCCCGCCTGCCCCTCCAGGAAAACTGCTTCCCGACAGGGCGTTGATGCCAAGTGACAAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CAA 90 bp | TTGGCTTCCCAACTCTCCTTCCACCAGGCCCCACTTTGGGACCTCAGTGGCGGCGCAGTAGCAGTAGCATaGCTGCTGGTTAGTGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: LASQLSFHQAPLWDLSGGAVAVA*LLVSAM Trigger: CATCGCACTAACCAGCAGCAATGCTACTGCTACTGC...GCCGCCACTGAGGTCCCAAAGTGGGGCCTGGTGGAAGGAGAGTTGGGAAGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CCA 90 bp | GCTGGTAGGACAGCACCATTTTCACTGCCTGCAGCGTCTTGGCGATaGCGCCTTTCTTCAAAGCGCCACCTTTCCTCACAGCCAGTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: AGRTAPFSLPAASWR*RLSSKRHLSSQPVR Trigger: TCGCACTGGCTGTGAGGAAAGGTGGCGCTTTGAAGAAAGGCGCCATCGCCAAGACGCTGCAGGCAGTGAAAATGGTGCTGTCCTACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS TCA 90 bp | GTCATGGGGGTGCTGGTGAGCTTGCCAAGCTGCAGGAGCTCCCAGTaGTGGTTGACAAAGGCCAGGATCTCCTCAAAGTCAAAGTACCGC | + |
|
Preference number: 5 (lower is better) Translates to: VMGVLVSLPSCRSSQ*WLTKARISSKSKYR Trigger: GCGGTACTTTGACTTTGAGGAGATCCTGGCCTTTGTCAACCATCACTGGGAGCTCCTGCAGCTTGGCAAGCTCACCAGCACCCCCATGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CCA 90 bp | ACACAGGAACCGGCTCTTGTAACTGTTGAGAGCGTTGAGGAGATGTaGCCCTCGTTCTGTCATGGGGGTGCTGGTGAGCTTGCCAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TQEPALVTVESVEEM*PSFCHGGAGELAKL Trigger: CAGCTTGGCAAGCTCACCAGCACCCCCATGACAGAACGAGGGCCACATCTCCTCAACGCTCTCAACAGTTACAAGAGCCGGTTCCTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CAA 90 bp | CAGACTCTGGGTCCTAGGCATCCTAAACTTTCTCAGGCACCCCCTACCTTCCTGATGCAGACGTCACACTaGGGCTCCTCTCCCGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: QTLGPRHPKLSQAPPTFLMQTSH*GSSPGT Trigger: TGTTCCGGGAGAGGAGCCCAAGTGTGACGTCTGCAT...CAGGAAGGTAGGGGGTGCCTGAGAAAGTTTAGGATGCCTAGGACCCAGAGTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CAA 90 bp | ATGCCCAGTGAGGGACAGATGGGTGTATGCCCGTGGAAGATGTGTGTCCACACAAGTCACAAGGCAGCTTaGCTTAGGACTGCTGACCCG | + |
|
Preference number: 5 (lower is better) Translates to: MPSEGQMGVCPWKMCVHTSHKAA*LRTADP Trigger: CGGGTCAGCAGTCCTAAGCAAAGCTGCCTTGTGACT...TGTGTGGACACACATCTTCCACGGGCATACACCCATCTGTCCCTCACTGGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS GCA 90 bp | CTCGCCTTTTCTGCTGCTGGGGTTCCTGAGGCAACAAACCAGGCTTaGTCTTTCCTTTCTTACGAAGCAGCTCGGAGGTCCCTTTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LAFSAAGVPEATNQA*SFLSYEAARRSLCH Trigger: GTGACAAAGGGACCTCCGAGCTGCTTCGTAAGAAAGGAAAGAGCAAGCCTGGTTTGTTGCCTCAGGAACCCCAGCAGCAGAAAAGGCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CAA 90 bp | TGGGTCCTAGGCATCCTAAACTTTCTCAGGCACCCCCTACCTTCCTGGGGTGAGGGCAACAAACCAGGCTaGCTCTTTCCTTTCTTACGA | + |
|
Preference number: 5 (lower is better) Translates to: WVLGILNFLRHPLPSWGEGNKPG*LFPFLR Trigger: TCGTAAGAAAGGAAAGAGCAAGCCTGGTTTGTTGCC...CTCACCCCAGGAAGGTAGGGGGTGCCTGAGAAAGTTTAGGATGCCTAGGACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CAA 90 bp | GAGGAACCAATAAAAAGTTTGAGGGGTGTGGAGTGTAGTATTGACAACGAGAGACCGCCGCCCTTTGCTTaGCTCGCAGGGGCCTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: EEPIKSLRGVECSIDNERPPPFA*LAGACA Trigger: TGCACAGGCCCCTGCGAGCAAAGCAAAGGGCGGCGG...TCTCTCGTTGTCAATACTACACTCCACACCCCTCAAACTTTTTATTGGTTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CCA 90 bp | GTGAACTATATCCACCCATCGCAAGGGCAGCCTCTCAATATACTCTaGGCCTTGGTTACACACGGAGCAGAAGAACAGGTAGAAGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VNYIHPSQGQPLNIL*ALVTHGAEEQVEAV Trigger: GACCGCTTCTACCTGTTCTTCTGCTCCGTGTGTAACCAAGGCCCAGAGTATATTGAGAGGCTGCCCTTGCGATGGGTGGATATAGTTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CAA 90 bp | CAGACTCTGGGTCCTAGGCATCCTAAACTTTCTCAGGCACCCCCTACCTTCCTGAATATACTCTGGGCCTaGGTTACACACGGAGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QTLGPRHPKLSQAPPTFLNILWA*VTHGAE Trigger: TTCTGCTCCGTGTGTAACCAAGGCCCAGAGTATATT...CAGGAAGGTAGGGGGTGCCTGAGAAAGTTTAGGATGCCTAGGACCCAGAGTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CAA 90 bp | GGAACCAACGATTCAGGCCCTTGTAAACTCCAAACCTGTCCCCAAAGTGATTGTTTGGTGATAGAGGACTaGAGGTGGGACAGGGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: GTNDSGPCKLQTCPQSDCLVIED*RWDRDE Trigger: CTCGTCCCTGTCCCACCTCAAGTCCTCTATCACCAA...ACAATCACTTTGGGGACAGGTTTGGAGTTTACAAGGGCCTGAATCGTTGGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CAA 90 bp | CCACTCCCCAGACTCTGGGTCCTAGGCATCCTAAACTTTCTCAGGCACCCCCTACACAGGACCCAGTATTaGGAATTATCTTCAAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLPRLWVLGILNFLRHPLHRTQY*ELSSKV Trigger: GACTTTTGAAGATAATTCCAAATACTGGGTCCTGTG...TAGGGGGTGCCTGAGAAAGTTTAGGATGCCTAGGACCCAGAGTCTGGGGAGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CAA 90 bp | GAGGAACCAATAAAAAGTTTGAGGGGTGTGGAGTGTAGTATTGACAACGAGAGAGCTGTCAGCTTCCTCTaGCGGCTGCCTACCGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EEPIKSLRGVECSIDNERAVSFL*RLPTVH Trigger: ATGGACGGTAGGCAGCCGCAAGAGGAAGCTGACAGC...TCTCTCGTTGTCAATACTACACTCCACACCCCTCAAACTTTTTATTGGTTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS-3UTR CAA 90 bp | AAACCAAAATCTTTTCAAAGGTGCACAGGGTTATACCATCAGTTGGCAGTAATGAGGGGCCTGTGCACTTaGGCTGTCAGCTTCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KPKSFQRCTGLYHQLAVMRGLCT*AVSFLL Trigger: CAAGAGGAAGCTGACAGCCAAAGTGCACAGGCCCCT...CATTACTGCCAACTGATGGTATAACCCTGTGCACCTTTGAAAAGATTTTGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS GCA 72 bp | GGCGCAGCGCCCCTCCAGCTCCGCCGCCCTTTGCTTTaGTCGCAGGGGCCTGTGCACTTTGGCTGTCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GAAPLQLRRPLL*SQGPVHFGCQL Trigger: AAGCTGACAGCCAAAGTGCACAGGCCCCTGCGAGCAAAGCAAAGGGCGGCGGAGCTGGAGGGGCGCTGCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS GCA 72 bp | TCTGAGGCGCAGCGCCCCTCCAGCTCCGCCGCCCTTTaGTTTGCTCGCAGGGGCCTGTGCACTTTGGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SEAQRPSSSAAL*FARRGLCTLAV Trigger: GACAGCCAAAGTGCACAGGCCCCTGCGAGCAAAGCAAAGGGCGGCGGAGCTGGAGGGGCGCTGCGCCTCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CCA 72 bp | GGCTGCCTACCGTCCATCTGGAGTCGTAGGAGAGGCTaGTGGAGGCAGACCCCGAGGTGCTGGCTGCGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GCLPSIWSRRRG*WRQTPRCWLRR Trigger: CCGACGCAGCCAGCACCTCGGGGTCTGCCTCCACCAGCCTCTCCTACGACTCCAGATGGACGGTAGGCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CAA 72 bp | TCATCCGGCTGCTCAGGACCCACAGCTCCCTCTGCATaGCTGTCTGAGGCGCAGCGCCCCTCCAGCTCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSGCSGPTAPSA*LSEAQRPSSSA Trigger: GGCGGAGCTGGAGGGGCGCTGCGCCTCAGACAGCAATGCAGAGGGAGCTGTGGGTCCTGAGCAGCCGGATGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS GCA 72 bp | AGCTCCGCCGCCCTTTGCTTTGCTCGCAGGGGCCTGTaGACTTTGGCTGTCAGCTTCCTCTTGCGGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSAALCFARRGL*TLAVSFLLRLP Trigger: AGGCAGCCGCAAGAGGAAGCTGACAGCCAAAGTGCACAGGCCCCTGCGAGCAAAGCAAAGGGCGGCGGAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CCA 72 bp | CCGCCCTTTGCTTTGCTCGCAGGGGCCTGTGCACTTTaGCTGTCAGCTTCCTCTTGCGGCTGCCTACCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PPFALLAGACAL*LSASSCGCLPS Trigger: GGACGGTAGGCAGCCGCAAGAGGAAGCTGACAGCCAAAGTGCACAGGCCCCTGCGAGCAAAGCAAAGGGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CAA 72 bp | GCCGCCCTTTGCTTTGCTCGCAGGGGCCTGTGCACTTaGGCTGTCAGCTTCCTCTTGCGGCTGCCTACCGTC | + |
|
Preference number: 6 (lower is better) Translates to: AALCFARRGLCT*AVSFLLRLPTV Trigger: GACGGTAGGCAGCCGCAAGAGGAAGCTGACAGCCAAAGTGCACAGGCCCCTGCGAGCAAAGCAAAGGGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CAA 90 bp | TCCAGCTCCGCCGCCCTTTGCTTTGCTCGCAGGGGCCTGTGCACTTaGGCTGTCAGCTTCCTCTTGCGGCTGCCTACCGTCCATCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSAALCFARRGLCT*AVSFLLRLPTVHLE Trigger: CTCCAGATGGACGGTAGGCAGCCGCAAGAGGAAGCTGACAGCCAAAGTGCACAGGCCCCTGCGAGCAAAGCAAAGGGCGGCGGAGCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CCA 72 bp | ACTTGGCATCAACGCCCTGTCGGGAAGCAGTTTTCCTaGAGGGGCAGGCGGGACTCGGATGCGCAGTCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TWHQRPVGKQFS*RGRRDSDAQSE Trigger: TTCCGACTGCGCATCCGAGTCCCGCCTGCCCCTCCAGGAAAACTGCTTCCCGACAGGGCGTTGATGCCAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS GCA 72 bp | GCCTGTGCACTTTGGCTGTCAGCTTCCTCTTGCGGCTaGCTACCGTCCATCTGGAGTCGTAGGAGAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ACALWLSASSCG*LPSIWSRRRGW Trigger: CCAGCCTCTCCTACGACTCCAGATGGACGGTAGGCAGCCGCAAGAGGAAGCTGACAGCCAAAGTGCACAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS GCA 72 bp | GCAGGGGCCTGTGCACTTTGGCTGTCAGCTTCCTCTTaGGGCTGCCTACCGTCCATCTGGAGTCGTAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: AGACALWLSASS*GCLPSIWSRRR Trigger: TCTCCTACGACTCCAGATGGACGGTAGGCAGCCGCAAGAGGAAGCTGACAGCCAAAGTGCACAGGCCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CAA 72 bp | GTACCACTCTCCAGGCCCGCCGCAGTAGCAGTAGCATaGCTGCTGGTTAGTGCGATGGGGCGAGTCCCAATC | + |
|
Preference number: 6 (lower is better) Translates to: VPLSRPAAVAVA*LLVSAMGRVPI Trigger: GATTGGGACTCGCCCCATCGCACTAACCAGCAGCAATGCTACTGCTACTGCGGCGGGCCTGGAGAGTGGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CAA 90 bp | CATCCGAAGGTACCACTCTCCAGGCCCGCCGCAGTAGCAGTAGCATaGCTGCTGGTTAGTGCGATGGGGCGAGTCCCAATCGAGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HPKVPLSRPAAVAVA*LLVSAMGRVPIEFL Trigger: GAGGAACTCGATTGGGACTCGCCCCATCGCACTAACCAGCAGCAATGCTACTGCTACTGCGGCGGGCCTGGAGAGTGGTACCTTCGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CCA 72 bp | AGGGACGAGTCGTCTCCACTGATGCTTTCAAGTGTGTaGCTGTCGATGCCTTCATCCGGCTGCTCAGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: RDESSPLMLSSV*LSMPSSGCSGP Trigger: GGGTCCTGAGCAGCCGGATGAAGGCATCGACAGCCACACACTTGAAAGCATCAGTGGAGACGACTCGTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CAA 72 bp | ATAGGCCCTGAAGTCTTCCCCATGCAGACGTCACACTaGGGCTCCTCTCCCGGAACACCAGCATGCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: IGPEVFPMQTSH*GSSPGTPACWM Trigger: CATCCAGCATGCTGGTGTTCCGGGAGAGGAGCCCAAGTGTGACGTCTGCATGGGGAAGACTTCAGGGCCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS CAA 90 bp | ATCTCGTTCATAGGCCCTGAAGTCTTCCCCATGCAGACGTCACACTaGGGCTCCTCTCCCGGAACACCAGCATGCTGGATGTCCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ISFIGPEVFPMQTSH*GSSPGTPACWMSFH Trigger: GTGGAAGGACATCCAGCATGCTGGTGTTCCGGGAGAGGAGCCCAAGTGTGACGTCTGCATGGGGAAGACTTCAGGGCCTATGAACGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS TCA 72 bp | ACAGCCAGTGCGAAAATGCAGCGTCGGCAGAACCAATaGGTGAGGAGGGGCCAGTTGGCATCAACTGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: TASAKMQRRQNQ*VRRGQLASTAM Trigger: CATCGCAGTTGATGCCAACTGGCCCCTCCTCACTCATTGGTTCTGCCGACGCTGCATTTTCGCACTGGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
||
| CDS TCA 72 bp | CCCATTCCAACAGGTACTGAACCTTGCCTTCTGGAGTaGCCCTCCGCGCCAACACCCGATATTTTTCCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PIPTGTEPCLLE*PSAPTPDIFPR Trigger: GCGGGGAAAAATATCGGGTGTTGGCGCGGAGGGTCACTCCAGAAGGCAAGGTTCAGTACCTGTTGGAATGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| CDS GCA 72 bp | GAACCAATGAGTGAGGAGGGGCCAGTTGGCATCAACTaGGATGGGGATGTGGCACTGTTGGTGGTAACCCAG | + |
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Preference number: 6 (lower is better) Translates to: EPMSEEGPVGIN*DGDVALLVVTQ Trigger: CTGGGTTACCACCAACAGTGCCACATCCCCATCGCAGTTGATGCCAACTGGCCCCTCCTCACTCATTGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| CDS GCA 72 bp | GAGTTCCTCCGGCTGGTAGGACAGCACCATTTTCACTaGCTGCAGCGTCTTGGCGATGGCGCCTTTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: EFLRLVGQHHFH*LQRLGDGAFLQ Trigger: TTGAAGAAAGGCGCCATCGCCAAGACGCTGCAGGCAGTGAAAATGGTGCTGTCCTACCAGCCGGAGGAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| CDS GCA 72 bp | CTTTCAAGTGTGTGGCTGTCGATGCCTTCATCCGGCTaGTCAGGACCCACAGCTCCCTCTGCATTGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LSSVWLSMPSSG*SGPTAPSALLS Trigger: AGACAGCAATGCAGAGGGAGCTGTGGGTCCTGAGCAGCCGGATGAAGGCATCGACAGCCACACACTTGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| CDS CCA 72 bp | GGTAGGACAGCACCATTTTCACTGCCTGCAGCGTCTTaGCGATGGCGCCTTTCTTCAAAGCGCCACCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: GRTAPFSLPAAS*RWRLSSKRHLS Trigger: GGAAAGGTGGCGCTTTGAAGAAAGGCGCCATCGCCAAGACGCTGCAGGCAGTGAAAATGGTGCTGTCCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| CDS CAA 90 bp | TGCTCTTTCCTTTCTTACGAAGCAGCTCGGAGGTCCCTTTGTCACTaGGCATCAACGCCCTGTCGGGAAGCAGTTTTCCTGGAGGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: CSFLSYEAARRSLCH*ASTPCREAVFLEGQ Trigger: CTGCCCCTCCAGGAAAACTGCTTCCCGACAGGGCGTTGATGCCAAGTGACAAAGGGACCTCCGAGCTGCTTCGTAAGAAAGGAAAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| CDS TCA 72 bp | GTGCTGGTGAGCTTGCCAAGCTGCAGGAGCTCCCAGTaGTGGTTGACAAAGGCCAGGATCTCCTCAAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: VLVSLPSCRSSQ*WLTKARISSKS Trigger: TGACTTTGAGGAGATCCTGGCCTTTGTCAACCATCACTGGGAGCTCCTGCAGCTTGGCAAGCTCACCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| CDS CCA 72 bp | CCCCTCCCATTCCAACAGGTACTGAACCTTGCCTTCTaGAGTGACCCTCCGCGCCAACACCCGATATTTTTC | + |
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Preference number: 6 (lower is better) Translates to: PLPFQQVLNLAF*SDPPRQHPIFF Trigger: GAAAAATATCGGGTGTTGGCGCGGAGGGTCACTCCAGAAGGCAAGGTTCAGTACCTGTTGGAATGGGAGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| CDS CAA 90 bp | CCAGGCTTGCTCTTTCCTTTCTTACGAAGCAGCTCGGAGGTCCCTTaGTCACTTGGCATCAACGCCCTGTCGGGAAGCAGTTTTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PGLLFPFLRSSSEVP*SLGINALSGSSFPG Trigger: TCCAGGAAAACTGCTTCCCGACAGGGCGTTGATGCCAAGTGACAAAGGGACCTCCGAGCTGCTTCGTAAGAAAGGAAAGAGCAAGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| CDS TCA 72 bp | ACACTTCCCACAGATGAGGATCTCGTTCATAGGCCCTaGAGTCTTCCCCATGCAGACGTCACACTTGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: TLPTDEDLVHRP*SLPHADVTLGL Trigger: GAGCCCAAGTGTGACGTCTGCATGGGGAAGACTTCAGGGCCTATGAACGAGATCCTCATCTGTGGGAAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| CDS CAA 72 bp | CTCTTTCCTTTCTTACGAAGCAGCTCGGAGGTCCCTTaGTCACTTGGCATCAACGCCCTGTCGGGAAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: LFPFLRSSSEVP*SLGINALSGSS Trigger: ACTGCTTCCCGACAGGGCGTTGATGCCAAGTGACAAAGGGACCTCCGAGCTGCTTCGTAAGAAAGGAAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| CDS CCA 72 bp | ATCCACCCATCGCAAGGGCAGCCTCTCAATATACTCTaGGCCTTGGTTACACACGGAGCAGAAGAACAGGTA | + |
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Preference number: 6 (lower is better) Translates to: IHPSQGQPLNIL*ALVTHGAEEQV Trigger: TACCTGTTCTTCTGCTCCGTGTGTAACCAAGGCCCAGAGTATATTGAGAGGCTGCCCTTGCGATGGGTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| CDS CAA 90 bp | TATATCCACCCATCGCAAGGGCAGCCTCTCAATATACTCTGGGCCTaGGTTACACACGGAGCAGAAGAACAGGTAGAAGCGGTCTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: YIHPSQGQPLNILWA*VTHGAEEQVEAVSK Trigger: TTTGGAGACCGCTTCTACCTGTTCTTCTGCTCCGTGTGTAACCAAGGCCCAGAGTATATTGAGAGGCTGCCCTTGCGATGGGTGGATATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| CDS CCA 72 bp | TCATCCAGTGTGAAGTCGAATATACTGGCTAGGTGGTaGTCTGTGCTCCAGGCTGAGGTGAAGTCACTACTG | + |
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Preference number: 6 (lower is better) Translates to: SSSVKSNILARW*SVLQAEVKSLL Trigger: CAGTAGTGACTTCACCTCAGCCTGGAGCACAGACCACCACCTAGCCAGTATATTCGACTTCACACTGGATGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| CDS GCA 72 bp | AGGCCAGGATCTCCTCAAAGTCAAAGTACCGCTTCTTaGTCTGTACTCCCAAGTTATAGAGAGCCAGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: RPGSPQSQSTAS*SVLPSYREPGE Trigger: TTCACCTGGCTCTCTATAACTTGGGAGTACAGAGCAAGAAGCGGTACTTTGACTTTGAGGAGATCCTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| CDS CCA 72 bp | ATTTCATCCAGTGTGAAGTCGAATATACTGGCTAGGTaGTGGTCTGTGCTCCAGGCTGAGGTGAAGTCACTA | + |
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Preference number: 6 (lower is better) Translates to: ISSSVKSNILAR*WSVLQAEVKSL Trigger: TAGTGACTTCACCTCAGCCTGGAGCACAGACCACCACCTAGCCAGTATATTCGACTTCACACTGGATGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028232.7 |
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| CDS CAA 72 bp | GTATTTGGAATTATCTTCAAAAGTCACAAGGCAGCTTaGCTTAGGACTGCTGACCCGCTTGATCTTGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: VFGIIFKSHKAA*LRTADPLDLAK Trigger: CTTGGCAAGATCAAGCGGGTCAGCAGTCCTAAGCAAAGCTGCCTTGTGACTTTTGAAGATAATTCCAAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028232.7 ENSMUST00000202907.2 |
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