Pregenerated sensors for PHF13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047777Ensembl transcript IDs: ENSMUST00000055688.10
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTCCCGAGCACAGCGGAGACAGGACAGCTAGCACCGGCTCCCAATaGCGGCGACTGGCTAACAATGACTGTGTGCCCTCACTGTTAGCT | + |
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Preference number: 1 (lower is better) Translates to: TPEHSGDRTASTGSQ*RRLANNDCVPSLLA Trigger: AGCTAACAGTGAGGGCACACAGTCATTGTTAGCCAGTCGCCGCCATTGGGAGCCGGTGCTAGCTGTCCTGTCTCCGCTGTGCTCGGGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR TCA 90 bp | TCTTGGGGACACCAGACCACAGCTCAGCAGCTCAGCAAGTACAACTaGGGCAAGGAAGTGAGACCACAAAAGGGCGGGCAACTTGGACGG | + |
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Preference number: 1 (lower is better) Translates to: SWGHQTTAQQLSKYN*GKEVRPQKGGQLGR Trigger: CCGTCCAAGTTGCCCGCCCTTTTGTGGTCTCACTTCCTTGCCTCAGTTGTACTTGCTGAGCTGCTGAGCTGTGGTCTGGTGTCCCCAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR GCA 90 bp | ATCTGGACGGCTTGTCCTTTGCTTAGGCACCTGAGTGGCAGGGTCTaGCTGCACCAGAGCTGTGAGTTCTGTGCTCAACTAAGGGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: IWTACPLLRHLSGRV*LHQSCEFCAQLREA Trigger: AGCCTCCCTTAGTTGAGCACAGAACTCACAGCTCTGGTGCAGGCAGACCCTGCCACTCAGGTGCCTAAGCAAAGGACAAGCCGTCCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR CCA 90 bp | AACAGCACACAGGGCCCAAGGACAGTGTCTTCTGTGGACTGTTACTaGACTGGGCACCACCAGCAGAGCTGGGACACCCAGTGTAACAGT | + |
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Preference number: 1 (lower is better) Translates to: NSTQGPRTVSSVDCY*TGHHQQSWDTQCNS Trigger: ACTGTTACACTGGGTGTCCCAGCTCTGCTGGTGGTGCCCAGTCCAGTAACAGTCCACAGAAGACACTGTCCTTGGGCCCTGTGTGCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR GCA 90 bp | AGCATTAGCCATCAACCAGGAGCCCAGAGAGGCTCACGCCCAGTTTaGATAAACAAGCTGATTGCAGCTGCCCAGCTCAACCTACCCCCA | + |
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Preference number: 1 (lower is better) Translates to: SISHQPGAQRGSRPV*INKLIAAAQLNLPP Trigger: TGGGGGTAGGTTGAGCTGGGCAGCTGCAATCAGCTTGTTTATGCAAACTGGGCGTGAGCCTCTCTGGGCTCCTGGTTGATGGCTAATGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR TCA 90 bp | CTATGTACAGTTCTATCTGGACGGCTTGTCCTTTGCTTAGGCACCTaGGTGGCAGGGTCTGCCTGCACCAGAGCTGTGAGTTCTGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: LCTVLSGRLVLCLGT*VAGSACTRAVSSVL Trigger: GAGCACAGAACTCACAGCTCTGGTGCAGGCAGACCCTGCCACTCAGGTGCCTAAGCAAAGGACAAGCCGTCCAGATAGAACTGTACATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR TCA 90 bp | AGACCACAGCTCAGCAGCTCAGCAAGTACAACTGAGGCAAGGAAGTaGGACCACAAAAGGGCGGGCAACTTGGACGGCTGCTGTATAGAC | + |
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Preference number: 1 (lower is better) Translates to: RPQLSSSASTTEARK*DHKRAGNLDGCCID Trigger: GTCTATACAGCAGCCGTCCAAGTTGCCCGCCCTTTTGTGGTCTCACTTCCTTGCCTCAGTTGTACTTGCTGAGCTGCTGAGCTGTGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR GCA 90 bp | AGGAGCCCAGAGAGGCTCACGCCCAGTTTGCATAAACAAGCTGATTaGAGCTGCCCAGCTCAACCTACCCCCAAACCAAGGTGTCCAAAT | + |
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Preference number: 1 (lower is better) Translates to: RSPERLTPSLHKQAD*SCPAQPTPKPRCPN Trigger: ATTTGGACACCTTGGTTTGGGGGTAGGTTGAGCTGGGCAGCTGCAATCAGCTTGTTTATGCAAACTGGGCGTGAGCCTCTCTGGGCTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR GCA 90 bp | CACACCTCTGAAACTCTGCAAGCTGGTGCTCTAGCACTCAGACCTTaGCTTGCCCCAGGAACCTGTATGGAAGGCAGAATGCCCATTCTT | + |
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Preference number: 1 (lower is better) Translates to: HTSETLQAGALALRP*LAPGTCMEGRMPIL Trigger: AAGAATGGGCATTCTGCCTTCCATACAGGTTCCTGGGGCAAGGCAAGGTCTGAGTGCTAGAGCACCAGCTTGCAGAGTTTCAGAGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR GCA 90 bp | CCAGAGAGGCTCACGCCCAGTTTGCATAAACAAGCTGATTGCAGCTaGCCAGCTCAACCTACCCCCAAACCAAGGTGTCCAAATTCTGAC | + |
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Preference number: 1 (lower is better) Translates to: PERLTPSLHKQADCS*PAQPTPKPRCPNSD Trigger: GTCAGAATTTGGACACCTTGGTTTGGGGGTAGGTTGAGCTGGGCAGCTGCAATCAGCTTGTTTATGCAAACTGGGCGTGAGCCTCTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR CCA 90 bp | AGCTCTCACGGTTTGATCTGCTCACTAGCTATGTACAGTTCTATCTaGACGGCTTGTCCTTTGCTTAGGCACCTGAGTGGCAGGGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: SSHGLICSLAMYSSI*TACPLLRHLSGRVC Trigger: GCAGACCCTGCCACTCAGGTGCCTAAGCAAAGGACAAGCCGTCCAGATAGAACTGTACATAGCTAGTGAGCAGATCAAACCGTGAGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR TCA 90 bp | CACACTGGCCACTCTGCTCTGTCTCAGGCTAACAAAGAATACGCGTaGCAACTGGGTAGGAAACACTACGGAGAAAGAATGAGCACTGGA | + |
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Preference number: 1 (lower is better) Translates to: HTGHSALSQANKEYA*QLGRKHYGERMSTG Trigger: TCCAGTGCTCATTCTTTCTCCGTAGTGTTTCCTACCCAGTTGTCACGCGTATTCTTTGTTAGCCTGAGACAGAGCAGAGTGGCCAGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR TCA 90 bp | GAACCTGTATGGAAGGCAGAATGCCCATTCTTTTCACCCATTATCTaGAGAACAGCACACAGGGCCCAAGGACAGTGTCTTCTGTGGACT | + |
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Preference number: 1 (lower is better) Translates to: EPVWKAECPFFSPII*RTAHRAQGQCLLWT Trigger: AGTCCACAGAAGACACTGTCCTTGGGCCCTGTGTGCTGTTCTTCAGATAATGGGTGAAAAGAATGGGCATTCTGCCTTCCATACAGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR TCA 90 bp | AATGCCTGTGACCTTACAAAGGTACTCCAGGAAGGGGAAGAAAGGTaGCACACTGGCCACTCTGCTCTGTCTCAGGCTAACAAAGAATAC | + |
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Preference number: 1 (lower is better) Translates to: NACDLTKVLQEGEER*HTGHSALSQANKEY Trigger: GTATTCTTTGTTAGCCTGAGACAGAGCAGAGTGGCCAGTGTGTCACCTTTCTTCCCCTTCCTGGAGTACCTTTGTAAGGTCACAGGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR GCA 90 bp | CAATGCAGAGAACATAGCTGGAGCAGCAGCTCTCACGGTTTGATCTaGTCACTAGCTATGTACAGTTCTATCTGGACGGCTTGTCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: QCREHSWSSSSHGLI*SLAMYSSIWTACPL Trigger: CAAAGGACAAGCCGTCCAGATAGAACTGTACATAGCTAGTGAGCAGATCAAACCGTGAGAGCTGCTGCTCCAGCTATGTTCTCTGCATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR GCA 90 bp | GGCTCTGATTTGCCAAGTTACAGTCTACACTCTGAGCTCCTTTGGTaGTTAAGACAATGTGGGAGAATGCCTGTGACCTTACAAAGGTAC | + |
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Preference number: 1 (lower is better) Translates to: GSDLPSYSLHSELLW*LRQCGRMPVTLQRY Trigger: GTACCTTTGTAAGGTCACAGGCATTCTCCCACATTGTCTTAAGCACCAAAGGAGCTCAGAGTGTAGACTGTAACTTGGCAAATCAGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR CCA 90 bp | AAAGGCTCTGATTTGCCAAGTTACAGTCTACACTCTGAGCTCCTTTaGTGCTTAAGACAATGTGGGAGAATGCCTGTGACCTTACAAAGG | + |
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Preference number: 1 (lower is better) Translates to: KGSDLPSYSLHSELL*CLRQCGRMPVTLQR Trigger: CCTTTGTAAGGTCACAGGCATTCTCCCACATTGTCTTAAGCACCAAAGGAGCTCAGAGTGTAGACTGTAACTTGGCAAATCAGAGCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR CCA 90 bp | AACTTTGGTTATTCTCAGGGTGAAGACACTGGACAACAACTGTCATaGGGCAGGTCTTTGGCAAATTCCTCTAACTTGTCCTGGGTATTT | + |
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Preference number: 1 (lower is better) Translates to: NFGYSQGEDTGQQLS*GRSLANSSNLSWVF Trigger: AAATACCCAGGACAAGTTAGAGGAATTTGCCAAAGACCTGCCCCATGACAGTTGTTGTCCAGTGTCTTCACCCTGAGAATAACCAAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR TCA 90 bp | GGGCCCAAGGACAGTGTCTTCTGTGGACTGTTACTGGACTGGGCACCACCAGCACTTTGCTTAGGCACCTaGGTGGCAGGGTCTGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: GPKDSVFCGLLLDWAPPALCLGT*VAGSAC Trigger: GCAGGCAGACCCTGCCACTCAGGTGCCTAAGCAAAG...TGCTGGTGGTGCCCAGTCCAGTAACAGTCCACAGAAGACACTGTCCTTGGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR GCA 90 bp | GGGCCCAAGGACAGTGTCTTCTGTGGACTGTTACTGGACTGGGCACCACCAGCACTGAGTGGCAGGGTCTaGCTGCACCAGAGCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: GPKDSVFCGLLLDWAPPALSGRV*LHQSCE Trigger: CTCACAGCTCTGGTGCAGGCAGACCCTGCCACTCAG...TGCTGGTGGTGCCCAGTCCAGTAACAGTCCACAGAAGACACTGTCCTTGGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR GCA 90 bp | GCTGACCCTTCCCTCCCAGCATTAGCCATCAACCAGGAGCCCAGAGAGGCTCACTTCCTCCTTTCCCTCTaGCCCAGGACCACCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: ADPSLPALAINQEPREAHFLLSL*PRTTSV Trigger: GACACTGGTGGTCCTGGGGCAGAGGGAAAGGAGGAA...GTGAGCCTCTCTGGGCTCCTGGTTGATGGCTAATGCTGGGAGGGAAGGGTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTGTGGACTGTTACTGGACTGGGCACCACCAGCAGAGCTGGGACACCCAGACCCAGGGCTCCTCTTaGGGACACCAGACCACAGCT | + |
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Preference number: 2 (lower is better) Translates to: SSVDCYWTGHHQQSWDTQTQGSS*GHQTTA Trigger: AGCTGTGGTCTGGTGTCCCCAAGAGGAGCCCTGGGT...CTGGGTGTCCCAGCTCTGCTGGTGGTGCCCAGTCCAGTAACAGTCCACAGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTGTGGACTGTTACTGGACTGGGCACCACCAGCAGAGCTGGGACACCCAGGTGGCAGGGTCTGCCTaGACCAGAGCTGTGAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: SSVDCYWTGHHQQSWDTQVAGSA*TRAVSS Trigger: AGAACTCACAGCTCTGGTGCAGGCAGACCCTGCCAC...CTGGGTGTCCCAGCTCTGCTGGTGGTGCCCAGTCCAGTAACAGTCCACAGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR GCA 90 bp | GCTGACCCTTCCCTCCCAGCATTAGCCATCAACCAGGAGCCCAGAGAGGCTCACACCTGGTGCTCTGTCTaGCTCCAATGCAGAGAACAT | + |
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Preference number: 2 (lower is better) Translates to: ADPSLPALAINQEPREAHTWCSV*LQCREH Trigger: ATGTTCTCTGCATTGGAGGCAGACAGAGCACCAGGT...GTGAGCCTCTCTGGGCTCCTGGTTGATGGCTAATGCTGGGAGGGAAGGGTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR TCA 90 bp | AGCCCAGAGAGGCTCACGCCCAGTTTGCATAAACAAGCTGATTGCAGCTGCCCAAAGGTGTCCAAATTCTaGCACCACCCACAGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SPERLTPSLHKQADCSCPKVSKF*HHPQGK Trigger: CTTTCCCTGTGGGTGGTGTCAGAATTTGGACACCTT...TGGGCAGCTGCAATCAGCTTGTTTATGCAAACTGGGCGTGAGCCTCTCTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR CAA 90 bp | GGACAACAACTGTCATGGGGCAGGTCTTTGGCAAATTCCTCTAACTaGTCCTGGGTATTTGTCCCATCAGAGCCACACAATAGCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GQQLSWGRSLANSSN*SWVFVPSEPHNSLG Trigger: CCCCAGGCTATTGTGTGGCTCTGATGGGACAAATACCCAGGACAAGTTAGAGGAATTTGCCAAAGACCTGCCCCATGACAGTTGTTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR TCA 90 bp | ATTCTCAGGGTGAAGACACTGGACAACAACTGTCATGGGGCAGGTCTTTGGCAATCTGGTTCACACCTCTaGAACTCTGCAAGCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: ILRVKTLDNNCHGAGLWQSGSHL*NSASWC Trigger: GCACCAGCTTGCAGAGTTTCAGAGGTGTGAACCAGA...TTGCCAAAGACCTGCCCCATGACAGTTGTTGTCCAGTGTCTTCACCCTGAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR CCA 90 bp | AAACACTACGGAGAAAGAATGAGCACTGGAGATGCTGGTTTGAGAGCCAACGCCCTCAGACCAGGGCTCTaGTTCACACCTCTGAAACTC | + |
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Preference number: 2 (lower is better) Translates to: KHYGERMSTGDAGLRANALRPGL*FTPLKL Trigger: GAGTTTCAGAGGTGTGAACCAGAGCCCTGGTCTGAG...GGCGTTGGCTCTCAAACCAGCATCTCCAGTGCTCATTCTTTCTCCGTAGTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR CCA 90 bp | GCTGACCCTTCCCTCCCAGCATTAGCCATCAACCAGGAGCCCAGAGAGGCTCACGAAAGAAAGTTAAACTaGGTGAGTGAGAAAGATGCT | + |
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Preference number: 2 (lower is better) Translates to: ADPSLPALAINQEPREAHERKLN*VSEKDA Trigger: AGCATCTTTCTCACTCACCCAGTTTAACTTTCTTTC...GTGAGCCTCTCTGGGCTCCTGGTTGATGGCTAATGCTGGGAGGGAAGGGTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR CAA 90 bp | TGCCTCCAATGCAGAGAACATAGCTGGAGCAGCAGCTCTCACGGTTaGATCTGCTCACTAGCTATGTACAGTTCTATCTGGACGGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: CLQCREHSWSSSSHG*ICSLAMYSSIWTAC Trigger: ACAAGCCGTCCAGATAGAACTGTACATAGCTAGTGAGCAGATCAAACCGTGAGAGCTGCTGCTCCAGCTATGTTCTCTGCATTGGAGGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR TCA 90 bp | ACACTGGACAACAACTGTCATGGGGCAGGTCTTTGGCAAATTCCTCTAACTTGTGAAGGGGAAGAAAGGTaGCACACTGGCCACTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: TLDNNCHGAGLWQIPLTCEGEER*HTGHSA Trigger: AGCAGAGTGGCCAGTGTGTCACCTTTCTTCCCCTTC...ACAAGTTAGAGGAATTTGCCAAAGACCTGCCCCATGACAGTTGTTGTCCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR CAA 90 bp | TCTCAGGGTGAAGACACTGGACAACAACTGTCATGGGGCAGGTCTTaGGCAAATTCCTCTAACTTGTCCTGGGTATTTGTCCCATCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SQGEDTGQQLSWGRS*ANSSNLSWVFVPSE Trigger: CTCTGATGGGACAAATACCCAGGACAAGTTAGAGGAATTTGCCAAAGACCTGCCCCATGACAGTTGTTGTCCAGTGTCTTCACCCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR TCA 90 bp | ATTCTCAGGGTGAAGACACTGGACAACAACTGTCATGGGGCAGGTCTTTGGCAATTTTCACCCATTATCTaGAGAACAGCACACAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: ILRVKTLDNNCHGAGLWQFSPII*RTAHRA Trigger: GGCCCTGTGTGCTGTTCTTCAGATAATGGGTGAAAA...TTGCCAAAGACCTGCCCCATGACAGTTGTTGTCCAGTGTCTTCACCCTGAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR GCA 90 bp | GACAACAACTGTCATGGGGCAGGTCTTTGGCAAATTCCTCTAACTTGTCCTGGGGGCAACTTGGACGGCTaGTGTATAGACACTTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: DNNCHGAGLWQIPLTCPGGNLDG*CIDTCD Trigger: ATCACAAGTGTCTATACAGCAGCCGTCCAAGTTGCC...CCCAGGACAAGTTAGAGGAATTTGCCAAAGACCTGCCCCATGACAGTTGTTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR CCA 90 bp | GACAACAACTGTCATGGGGCAGGTCTTTGGCAAATTCCTCTAACTTGTCCTGGGCACTCTGAGCTCCTTTaGTGCTTAAGACAATGTGGG | + |
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Preference number: 2 (lower is better) Translates to: DNNCHGAGLWQIPLTCPGHSELL*CLRQCG Trigger: CCCACATTGTCTTAAGCACCAAAGGAGCTCAGAGTG...CCCAGGACAAGTTAGAGGAATTTGCCAAAGACCTGCCCCATGACAGTTGTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTGCCCCAGGAACCTGTATGGAAGGCAGAATGCCCATTCTTTTCACCCATATAAAAGAGCAACACTaGGAACAAACAGCCAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: CLAPGTCMEGRMPILFTHIKEQH*EQTARE Trigger: TTCCCTGGCTGTTTGTTCTCAGTGTTGCTCTTTTAT...ATGGGTGAAAAGAATGGGCATTCTGCCTTCCATACAGGTTCCTGGGGCAAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR TCA 90 bp | AAACACTACGGAGAAAGAATGAGCACTGGAGATGCTGGTTTGAGAGCCAACGCCCAAGAAACTGAGTTATaGACACAGAACACCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: KHYGERMSTGDAGLRANAQETEL*TQNTST Trigger: GGTGGAGGTGTTCTGTGTTCATAACTCAGTTTCTTG...GGCGTTGGCTCTCAAACCAGCATCTCCAGTGCTCATTCTTTCTCCGTAGTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR GCA 90 bp | AATAATGGCCAGCTCCACTGTTCCACAACAAAACCACACATATTCTTAAATGCACTAGCACTCAGACCTTaGCTTGCCCCAGGAACCTGT | + |
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Preference number: 2 (lower is better) Translates to: NNGQLHCSTTKPHIFLNALALRP*LAPGTC Trigger: ACAGGTTCCTGGGGCAAGGCAAGGTCTGAGTGCTAG...TGCATTTAAGAATATGTGTGGTTTTGTTGTGGAACAGTGGAGCTGGCCATTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGAGCACATGTAATAATGGCCAGCTCCACTGTTCCACAACAAAACCACACCAGTGGCAAATACTTTaGGCTGTATTGTGGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: SLSTCNNGQLHCSTTKPHQWQIL*AVLWGK Trigger: TTTTCCCCACAATACAGCCCAAAGTATTTGCCACTG...GTGTGGTTTTGTTGTGGAACAGTGGAGCTGGCCATTATTACATGTGCTCAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR TCA 72 bp | TTTCCCTCTGCCCCAGGACCACCAGTGTCCAGGAGCTaGGCCAGCCCTCACTCAGACCAGGGCTCTGGTTCA | + |
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Preference number: 3 (lower is better) Translates to: FPSAPGPPVSRS*ASPHSDQGSGS Trigger: TGAACCAGAGCCCTGGTCTGAGTGAGGGCTGGCTCAGCTCCTGGACACTGGTGGTCCTGGGGCAGAGGGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR TCA 72 bp | CCTGGCCAAAGCCCACGGGAAGGGTCTACTTGGGGCTaGCCCTTCCCTCCCAGCATTAGCCATCAACCAGGA | + |
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Preference number: 3 (lower is better) Translates to: PGQSPREGSTWG*PFPPSISHQPG Trigger: TCCTGGTTGATGGCTAATGCTGGGAGGGAAGGGTCAGCCCCAAGTAGACCCTTCCCGTGGGCTTTGGCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR CCA 72 bp | CACAGCGGAGACAGGACAGCTAGCACCGGCTCCCAATaGCGGCGACTGGCTAACAATGACTGTGTGCCCTCA | + |
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Preference number: 3 (lower is better) Translates to: HSGDRTASTGSQ*RRLANNDCVPS Trigger: TGAGGGCACACAGTCATTGTTAGCCAGTCGCCGCCATTGGGAGCCGGTGCTAGCTGTCCTGTCTCCGCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR CCA 72 bp | CAGGAGCTGAGCCAGCCCTCACTCAGACCAGGGCTCTaGTTCACACCTCTGAAACTCTGCAAGCTGGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: QELSQPSLRPGL*FTPLKLCKLVL Trigger: GAGCACCAGCTTGCAGAGTTTCAGAGGTGTGAACCAGAGCCCTGGTCTGAGTGAGGGCTGGCTCAGCTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR-3UTR CAA 90 bp | TGCCTTGCCCCAGGAACCTGTATGGAAGGCAGAATGCCCATTCTTTTCACCCATCACCCAGGGCTCCTCTaGGGGACACCAGACCACAGC | + |
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Preference number: 3 (lower is better) Translates to: CLAPGTCMEGRMPILFTHHPGLL*GTPDHS Trigger: GCTGTGGTCTGGTGTCCCCAAGAGGAGCCCTGGGTG...ATGGGTGAAAAGAATGGGCATTCTGCCTTCCATACAGGTTCCTGGGGCAAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR TCA 72 bp | CTCAGCAGCTCAGCAAGTACAACTGAGGCAAGGAAGTaGGACCACAAAAGGGCGGGCAACTTGGACGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: LSSSASTTEARK*DHKRAGNLDGC Trigger: GCAGCCGTCCAAGTTGCCCGCCCTTTTGTGGTCTCACTTCCTTGCCTCAGTTGTACTTGCTGAGCTGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR TCA 72 bp | AGCCCTCACTCAGACCAGGGCTCTGGTTCACACCTCTaGAACTCTGCAAGCTGGTGCTCTAGCACTCAGACC | + |
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Preference number: 3 (lower is better) Translates to: SPHSDQGSGSHL*NSASWCSSTQT Trigger: GGTCTGAGTGCTAGAGCACCAGCTTGCAGAGTTTCAGAGGTGTGAACCAGAGCCCTGGTCTGAGTGAGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR CCA 72 bp | AGAACAGCACACAGGGCCCAAGGACAGTGTCTTCTGTaGACTGTTACTGGACTGGGCACCACCAGCAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: RTAHRAQGQCLL*TVTGLGTTSRA Trigger: AGCTCTGCTGGTGGTGCCCAGTCCAGTAACAGTCCACAGAAGACACTGTCCTTGGGCCCTGTGTGCTGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| 3UTR TCA 72 bp | CACCAGACCACAGCTCAGCAGCTCAGCAAGTACAACTaGGGCAAGGAAGTGAGACCACAAAAGGGCGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: HQTTAQQLSKYN*GKEVRPQKGGQ Trigger: TTGCCCGCCCTTTTGTGGTCTCACTTCCTTGCCTCAGTTGTACTTGCTGAGCTGCTGAGCTGTGGTCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR GCA 72 bp | GAGAGGCTCACGCCCAGTTTGCATAAACAAGCTGATTaGAGCTGCCCAGCTCAACCTACCCCCAAACCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ERLTPSLHKQAD*SCPAQPTPKPR Trigger: CCTTGGTTTGGGGGTAGGTTGAGCTGGGCAGCTGCAATCAGCTTGTTTATGCAAACTGGGCGTGAGCCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR GCA 72 bp | CATCAACCAGGAGCCCAGAGAGGCTCACGCCCAGTTTaGATAAACAAGCTGATTGCAGCTGCCCAGCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: HQPGAQRGSRPV*INKLIAAAQLN Trigger: GTTGAGCTGGGCAGCTGCAATCAGCTTGTTTATGCAAACTGGGCGTGAGCCTCTCTGGGCTCCTGGTTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR GCA 72 bp | GAAACTCTGCAAGCTGGTGCTCTAGCACTCAGACCTTaGCTTGCCCCAGGAACCTGTATGGAAGGCAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: ETLQAGALALRP*LAPGTCMEGRM Trigger: CATTCTGCCTTCCATACAGGTTCCTGGGGCAAGGCAAGGTCTGAGTGCTAGAGCACCAGCTTGCAGAGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR-3UTR CAA 90 bp | GACAACAACTGTCATGGGGCAGGTCTTTGGCAAATTCCTCTAACTTGTCCTGGGTGGACGGCTTGTCCTTaGCTTAGGCACCTGAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: DNNCHGAGLWQIPLTCPGWTACP*LRHLSG Trigger: GCCACTCAGGTGCCTAAGCAAAGGACAAGCCGTCCA...CCCAGGACAAGTTAGAGGAATTTGCCAAAGACCTGCCCCATGACAGTTGTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR TCA 72 bp | GACCTTACAAAGGTACTCCAGGAAGGGGAAGAAAGGTaGCACACTGGCCACTCTGCTCTGTCTCAGGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: DLTKVLQEGEER*HTGHSALSQAN Trigger: GTTAGCCTGAGACAGAGCAGAGTGGCCAGTGTGTCACCTTTCTTCCCCTTCCTGGAGTACCTTTGTAAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR CCA 72 bp | TGGTGCTCTGTCTGCCTCCAATGCAGAGAACATAGCTaGAGCAGCAGCTCTCACGGTTTGATCTGCTCACTA | + |
|
Preference number: 3 (lower is better) Translates to: WCSVCLQCREHS*SSSSHGLICSL Trigger: TAGTGAGCAGATCAAACCGTGAGAGCTGCTGCTCCAGCTATGTTCTCTGCATTGGAGGCAGACAGAGCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTGAGCACATGTAATAATGGCCAGCTCCACTGTTCCACAACAAAACCACACCACTCAGACCTTGCCTaGCCCCAGGAACCTGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: SLSTCNNGQLHCSTTKPHHSDLA*PQEPVW Trigger: CCATACAGGTTCCTGGGGCAAGGCAAGGTCTGAGTG...GTGTGGTTTTGTTGTGGAACAGTGGAGCTGGCCATTATTACATGTGCTCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR CCA 72 bp | GAAACACTACGGAGAAAGAATGAGCACTGGAGATGCTaGTTTGAGAGCCAACGCCCTCTTCCTCCTTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: ETLRRKNEHWRC*FESQRPLPPFP Trigger: AGGGAAAGGAGGAAGAGGGCGTTGGCTCTCAAACCAGCATCTCCAGTGCTCATTCTTTCTCCGTAGTGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR CCA 72 bp | GGTTTGATCTGCTCACTAGCTATGTACAGTTCTATCTaGACGGCTTGTCCTTTGCTTAGGCACCTGAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GLICSLAMYSSI*TACPLLRHLSG Trigger: GCCACTCAGGTGCCTAAGCAAAGGACAAGCCGTCCAGATAGAACTGTACATAGCTAGTGAGCAGATCAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR CCA 72 bp | TGGGGCAGGTCTTTGGCAAATTCCTCTAACTTGTCCTaGGTATTTGTCCCATCAGAGCCACACAATAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: WGRSLANSSNLS*VFVPSEPHNSL Trigger: CAGGCTATTGTGTGGCTCTGATGGGACAAATACCCAGGACAAGTTAGAGGAATTTGCCAAAGACCTGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR TCA 72 bp | TGGAAGGCAGAATGCCCATTCTTTTCACCCATTATCTaGAGAACAGCACACAGGGCCCAAGGACAGTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: WKAECPFFSPII*RTAHRAQGQCL Trigger: AAGACACTGTCCTTGGGCCCTGTGTGCTGTTCTTCAGATAATGGGTGAAAAGAATGGGCATTCTGCCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR CCA 72 bp | CCTGGGTATTTGTCCCATCAGAGCCACACAATAGCCTaGGGGCAAGACTGTTTCTATCACAGCTTCTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: PGYLSHQSHTIA*GQDCFYHSFSL Trigger: TAAAGAGAAGCTGTGATAGAAACAGTCTTGCCCCCAGGCTATTGTGTGGCTCTGATGGGACAAATACCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR TCA 72 bp | CACTCTGCTCTGTCTCAGGCTAACAAAGAATACGCGTaGCAACTGGGTAGGAAACACTACGGAGAAAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: HSALSQANKEYA*QLGRKHYGERM Trigger: CATTCTTTCTCCGTAGTGTTTCCTACCCAGTTGTCACGCGTATTCTTTGTTAGCCTGAGACAGAGCAGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR TCA 72 bp | TTCTATCACAGCTTCTCTTTAGAAGAGCTCTCCCCTTaGGGTCTGCACAATCTACAGAGCTCAGCAGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: FYHSFSLEELSP*GLHNLQSSAVL Trigger: AAGTACTGCTGAGCTCTGTAGATTGTGCAGACCTCAAGGGGAGAGCTCTTCTAAAGAGAAGCTGTGATAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR GCA 72 bp | TTGCCAAGTTACAGTCTACACTCTGAGCTCCTTTGGTaGTTAAGACAATGTGGGAGAATGCCTGTGACCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LPSYSLHSELLW*LRQCGRMPVTL Trigger: TAAGGTCACAGGCATTCTCCCACATTGTCTTAAGCACCAAAGGAGCTCAGAGTGTAGACTGTAACTTGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR TCA 72 bp | AACAGATGTCAAATGTATTCCAGAGGCATTGATCTCTaGGCACATGTAATAATGGCCAGCTCCACTGTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: NRCQMYSRGIDL*AHVIMASSTVP Trigger: TGGAACAGTGGAGCTGGCCATTATTACATGTGCTCAGAGATCAATGCCTCTGGAATACATTTGACATCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR-3UTR CAA 90 bp | AATAATGGCCAGCTCCACTGTTCCACAACAAAACCACACATATTCTTAAATGCATCATGGGGCAGGTCTTaGGCAAATTCCTCTAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: NNGQLHCSTTKPHIFLNASWGRS*ANSSNL Trigger: CAAGTTAGAGGAATTTGCCAAAGACCTGCCCCATGA...TGCATTTAAGAATATGTGTGGTTTTGTTGTGGAACAGTGGAGCTGGCCATTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR TCA 72 bp | AAACACAAACAGATGTCAAATGTATTCCAGAGGCATTaGTCTCTGAGCACATGTAATAATGGCCAGCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: KHKQMSNVFQRH*SLSTCNNGQLH Trigger: GTGGAGCTGGCCATTATTACATGTGCTCAGAGATCAATGCCTCTGGAATACATTTGACATCTGTTTGTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR-3UTR CAA 90 bp | AATAATGGCCAGCTCCACTGTTCCACAACAAAACCACACATATTCTTAAATGCAACAGTGGCAAATACTTaGGGCTGTATTGTGGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NNGQLHCSTTKPHIFLNATVANT*GCIVGK Trigger: TTTCCCCACAATACAGCCCAAAGTATTTGCCACTGT...TGCATTTAAGAATATGTGTGGTTTTGTTGTGGAACAGTGGAGCTGGCCATTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR CCA 90 bp | GAGTTCTGTGCTCAACTAAGGGAGGCTAGAGCCCAGGCCCTTCCAGTCCCGCCTTCCCGGCAGTGCTGTTaGCGGGGCTGGGACTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EFCAQLREARAQALPVPPSRQCC*RGWDCS Trigger: GGAGCAGTCCCAGCCCCGCCAACAGCACTGCCGGGA...AGGCGGGACTGGAAGGGCCTGGGCTCTAGCCTCCCTTAGTTGAGCACAGAACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR CCA 90 bp | ACCTCCACTCCCGAGCACAGCGGAGACAGGACAGCTAGCACCGGCTCCCAATGGAGGGAAGGCTGCAGGTaGCTGAAGCATCGGTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSTPEHSGDRTASTGSQWREGCR*LKHRSG Trigger: GCCCGACCGATGCTTCAGCCACCTGCAGCCTTCCCT...CCATTGGGAGCCGGTGCTAGCTGTCCTGTCTCCGCTGTGCTCGGGAGTGGAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGTGGACTGTTACTGGACTGGGCACCACCAGCAGAGCTGGGACACCCAGGTCAGAGTCCCAGCCTaGGCAGGGGTCAGCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVDCYWTGHHQQSWDTQVRVPA*AGVSRR Trigger: GCGTCTGCTGACCCCTGCTCAGGCTGGGACTCTGAC...CTGGGTGTCCCAGCTCTGCTGGTGGTGCCCAGTCCAGTAACAGTCCACAGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR TCA 90 bp | GAGTTCTGTGCTCAACTAAGGGAGGCTAGAGCCCAGGCCCTTCCAGTCCCGCCTTTTGCACAGGACAGGTaGATCCAGGTGTGGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: EFCAQLREARAQALPVPPFAQDR*IQVWHS Trigger: CGAGTGCCACACCTGGATTCACCTGTCCTGTGCAAA...AGGCGGGACTGGAAGGGCCTGGGCTCTAGCCTCCCTTAGTTGAGCACAGAACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR CCA 90 bp | CCCAAGGACAGTGTCTTCTGTGGACTGTTACTGGACTGGGCACCACCAGCAGAGCGTTACACTCGATCATaGGGCGGCCGGCAAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKDSVFCGLLLDWAPPAERYTRS*GGRQRA Trigger: AGCCCTTTGCCGGCCGCCCCATGATCGAGTGTAACG...CTCTGCTGGTGGTGCCCAGTCCAGTAACAGTCCACAGAAGACACTGTCCTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR CCA 90 bp | AGCCCAGAGAGGCTCACGCCCAGTTTGCATAAACAAGCTGATTGCAGCTGCCCAAGCCGTCGCTGTCAATaGTCCCGGCAGTGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPERLTPSLHKQADCSCPSRRCQ*SRQCCW Trigger: CCAACAGCACTGCCGGGACCATTGACAGCGACGGCT...TGGGCAGCTGCAATCAGCTTGTTTATGCAAACTGGGCGTGAGCCTCTCTGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR TCA 90 bp | CCCAAGGACAGTGTCTTCTGTGGACTGTTACTGGACTGGGCACCACCAGCAGAGTCAGCAGGCTCTCCCTaGATCCCTCCTTCACAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PKDSVFCGLLLDWAPPAESAGSP*IPPSQV Trigger: TACCTGTGAAGGAGGGATTCAGGGAGAGCCTGCTGA...CTCTGCTGGTGGTGCCCAGTCCAGTAACAGTCCACAGAAGACACTGTCCTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR GCA 90 bp | CCCAAGGACAGTGTCTTCTGTGGACTGTTACTGGACTGGGCACCACCAGCAGAGCCGGGACATTGGACTTaGGGATCTTTGCACAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PKDSVFCGLLLDWAPPAEPGHWT*GSLHRT Trigger: TGTCCTGTGCAAAGATCCGCAAGTCCAATGTCCCGG...CTCTGCTGGTGGTGCCCAGTCCAGTAACAGTCCACAGAAGACACTGTCCTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR CAA 72 bp | CCATCAACCAGGAGCCCAGAGAGGCTCACGCCCAGTTaGCATAAACAAGCTGATTGCAGCTGCCCAGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PSTRSPERLTPS*HKQADCSCPAQ Trigger: TTGAGCTGGGCAGCTGCAATCAGCTTGTTTATGCAAACTGGGCGTGAGCCTCTCTGGGCTCCTGGTTGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR TCA 90 bp | GTATTTGTCCCATCAGAGCCACACAATAGCCTGGGGGCAAGACTGTTTCTATCAAAGGCTGCAGGTGGCTaGAGCATCGGTCGGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VFVPSEPHNSLGARLFLSKAAGG*SIGRAL Trigger: CAGTGCCCGACCGATGCTTCAGCCACCTGCAGCCTT...TGATAGAAACAGTCTTGCCCCCAGGCTATTGTGTGGCTCTGATGGGACAAATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR GCA 90 bp | GCCCAGCTCAACCTACCCCCAAACCAAGGTGTCCAAATTCTGACACCACCCACAGTATGTCGCTGTCCCTaGGCTTCCTCCTCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AQLNLPPNQGVQILTPPTVCRCP*ASSSSS Trigger: AGAAGAAGAGGAGGAAGCGCAGGGACAGCGACATAC...TGTGGGTGGTGTCAGAATTTGGACACCTTGGTTTGGGGGTAGGTTGAGCTGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR CAA 72 bp | CACTACGGAGAAAGAATGAGCACTGGAGATGCTGGTTaGAGAGCCAACGCCCTCTTCCTCCTTTCCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HYGERMSTGDAG*RANALFLLSLC Trigger: GCAGAGGGAAAGGAGGAAGAGGGCGTTGGCTCTCAAACCAGCATCTCCAGTGCTCATTCTTTCTCCGTAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR TCA 90 bp | GCCTTGCCCCAGGAACCTGTATGGAAGGCAGAATGCCCATTCTTTTCACCCATTCGGGCACTGAAGGCGTaGTGTCAGAGAAACCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALPQEPVWKAECPFFSPIRALKA*CQRNQC Trigger: ACACTGGTTTCTCTGACATCACGCCTTCAGTGCCCG...AATGGGTGAAAAGAATGGGCATTCTGCCTTCCATACAGGTTCCTGGGGCAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR GCA 90 bp | ATTCTCAGGGTGAAGACACTGGACAACAACTGTCATGGGGCAGGTCTTTGGCAATGCAAGAGGGAAGGCTaGAGGTGGCTGAAGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: ILRVKTLDNNCHGAGLWQCKREG*RWLKHR Trigger: CCGATGCTTCAGCCACCTGCAGCCTTCCCTCTTGCA...TTGCCAAAGACCTGCCCCATGACAGTTGTTGTCCAGTGTCTTCACCCTGAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR CCA 90 bp | AGCCCAGAGAGGCTCACGCCCAGTTTGCATAAACAAGCTGATTGCAGCTGCCCAACCACCTGCTTTCCCTaGCGGACAATAGTCCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPERLTPSLHKQADCSCPTTCFP*RTIVRF Trigger: AAAACGGACTATTGTCCGCCAGGGAAAGCAGGTGGT...TGGGCAGCTGCAATCAGCTTGTTTATGCAAACTGGGCGTGAGCCTCTCTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR TCA 90 bp | AAACACTACGGAGAAAGAATGAGCACTGGAGATGCTGGTTTGAGAGCCAACGCCTGTGACCTGATCAGGTaGCACAGTAGCACAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KHYGERMSTGDAGLRANACDLIR*HSSTRA Trigger: GGCTCTTGTGCTACTGTGTCACCTGATCAGGTCACA...GGCGTTGGCTCTCAAACCAGCATCTCCAGTGCTCATTCTTTCTCCGTAGTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR GCA 90 bp | GACAACAACTGTCATGGGGCAGGTCTTTGGCAAATTCCTCTAACTTGTCCTGGGCTCCACATATGGGTCTaGAGCTTCCAGCTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DNNCHGAGLWQIPLTCPGLHIWV*SFQLQQ Trigger: CTGCTGAAGCTGGAAGCTGCAGACCCATATGTGGAG...CCCAGGACAAGTTAGAGGAATTTGCCAAAGACCTGCCCCATGACAGTTGTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR CCA 90 bp | GACAACAACTGTCATGGGGCAGGTCTTTGGCAAATTCCTCTAACTTGTCCTGGGGGGAGTCTCCACATATaGGTCTGCAGCTTCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DNNCHGAGLWQIPLTCPGGSLHI*VCSFQL Trigger: AAGCTGGAAGCTGCAGACCCATATGTGGAGACTCCC...CCCAGGACAAGTTAGAGGAATTTGCCAAAGACCTGCCCCATGACAGTTGTTGTC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR GCA 90 bp | AAACACTACGGAGAAAGAATGAGCACTGGAGATGCTGGTTTGAGAGCCAACGCCGATGTAGCCCGCATATaGCAAGACGAAGGTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KHYGERMSTGDAGLRANADVARI*QDEGAE Trigger: TTCTGCACCTTCGTCTTGGCATATGCGGGCTACATC...GGCGTTGGCTCTCAAACCAGCATCTCCAGTGCTCATTCTTTCTCCGTAGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR GCA 90 bp | GTATTTGTCCCATCAGAGCCACACAATAGCCTGGGGGCAAGACTGTTTCTATCATCTCGGAACACCACCTaGTTTCCCTGGCGGACAATA | + |
|
Preference number: 4 (lower is better) Translates to: VFVPSEPHNSLGARLFLSSRNTT*FPWRTI Trigger: TATTGTCCGCCAGGGAAAGCAGGTGGTGTTCCGAGA...TGATAGAAACAGTCTTGCCCCCAGGCTATTGTGTGGCTCTGATGGGACAAATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR CCA 90 bp | GTATTTGTCCCATCAGAGCCACACAATAGCCTGGGGGCAAGACTGTTTCTATCAGAGTCCCGGCACTTTTaGCAGACAAAAACTTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VFVPSEPHNSLGARLFLSESRHF*QTKTSG Trigger: CCCGGAAGTTTTTGTCTGCCAAAAGTGCCGGGACTC...TGATAGAAACAGTCTTGCCCCCAGGCTATTGTGTGGCTCTGATGGGACAAATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR TCA 90 bp | GTATTTGTCCCATCAGAGCCACACAATAGCCTGGGGGCAAGACTGTTTCTATCAAGGTGCAGAATTTGTTaGAGTCTTCCACAGTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFVPSEPHNSLGARLFLSRCRIC*SLPQSG Trigger: GCCGGACTGTGGAAGACTTCAACAAATTCTGCACCT...TGATAGAAACAGTCTTGCCCCCAGGCTATTGTGTGGCTCTGATGGGACAAATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR GCA 90 bp | GTATTTGTCCCATCAGAGCCACACAATAGCCTGGGGGCAAGACTGTTTCTATCAGGACTTGCGGATCTTTaGACAGGACAGGTGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VFVPSEPHNSLGARLFLSGLADL*TGQVNP Trigger: TGGATTCACCTGTCCTGTGCAAAGATCCGCAAGTCC...TGATAGAAACAGTCTTGCCCCCAGGCTATTGTGTGGCTCTGATGGGACAAATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR CAA 72 bp | TGCAGAGAACATAGCTGGAGCAGCAGCTCTCACGGTTaGATCTGCTCACTAGCTATGTACAGTTCTATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CREHSWSSSSHG*ICSLAMYSSIW Trigger: CCAGATAGAACTGTACATAGCTAGTGAGCAGATCAAACCGTGAGAGCTGCTGCTCCAGCTATGTTCTCTGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR CCA 90 bp | TCTCTGAGCACATGTAATAATGGCCAGCTCCACTGTTCCACAACAAAACCACACGACGGATATCAAACTTaGAGTCCCGGCACTTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSTCNNGQLHCSTTKPHDGYQT*SPGTFG Trigger: GCCAAAAGTGCCGGGACTCCAAGTTTGATATCCGTC...GTGTGGTTTTGTTGTGGAACAGTGGAGCTGGCCATTATTACATGTGCTCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR TCA 90 bp | AATAATGGCCAGCTCCACTGTTCCACAACAAAACCACACATATTCTTAAATGCAAGCACAAGAGCCACTTaGGGGTGTGTCAGAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NNGQLHCSTTKPHIFLNASTRAT*GCVRVP Trigger: TGGGACTCTGACACACCCTCAAGTGGCTCTTGTGCT...TGCATTTAAGAATATGTGTGGTTTTGTTGTGGAACAGTGGAGCTGGCCATTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| 3UTR CAA 72 bp | TTTCTATCACAGCTTCTCTTTAGAAGAGCTCTCCCCTaGAGGTCTGCACAATCTACAGAGCTCAGCAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: FLSQLLFRRALP*RSAQSTELSST Trigger: AGTACTGCTGAGCTCTGTAGATTGTGCAGACCTCAAGGGGAGAGCTCTTCTAAAGAGAAGCTGTGATAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR TCA 90 bp | AATAATGGCCAGCTCCACTGTTCCACAACAAAACCACACATATTCTTAAATGCATCATGCAGAAACAGGTaGCGAGGTCCCAGGAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: NNGQLHCSTTKPHIFLNASCRNR*RGPRNH Trigger: ATGATTCCTGGGACCTCGTCACCTGTTTCTGCATGA...TGCATTTAAGAATATGTGTGGTTTTGTTGTGGAACAGTGGAGCTGGCCATTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS-3UTR GCA 90 bp | AATAATGGCCAGCTCCACTGTTCCACAACAAAACCACACATATTCTTAAATGCACTTCATCATTGCCAGTaGTGTCTTCGTCTCGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: NNGQLHCSTTKPHIFLNALHHCQ*CLRLGT Trigger: TGTTCCGAGACGAAGACAGCACTGGCAATGATGAAG...TGCATTTAAGAATATGTGTGGTTTTGTTGTGGAACAGTGGAGCTGGCCATTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS GCA 90 bp | CAGAGAAACCAGTGTCCCAGCCGTCGCTGTCAATGGTCCCGGCAGTaGTGTTGGCGGGGCTGGGACTGCTCCTCAGGGGGAGCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QRNQCPSRRCQWSRQ*CWRGWDCSSGGAPP Trigger: AGGAGGAGCTCCCCCTGAGGAGCAGTCCCAGCCCCGCCAACAGCACTGCCGGGACCATTGACAGCGACGGCTGGGACACTGGTTTCTCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CCA 90 bp | AACCAGTGTCCCAGCCGTCGCTGTCAATGGTCCCGGCAGTGCTGTTaGCGGGGCTGGGACTGCTCCTCAGGGGGAGCTCCTCCTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: NQCPSRRCQWSRQCC*RGWDCSSGGAPPLG Trigger: ACCCAAAGGAGGAGCTCCCCCTGAGGAGCAGTCCCAGCCCCGCCAACAGCACTGCCGGGACCATTGACAGCGACGGCTGGGACACTGGTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS-3UTR CAA 90 bp | TCTTCTGTGGACTGTTACTGGACTGGGCACCACCAGCAGAGCTGGGACACCCAGGGGGGAGCTCCTCCTTaGGGTAGGGGATGTAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSVDCYWTGHHQQSWDTQGGAPP*GRGCSP Trigger: CGGGCTACATCCCCTACCCAAAGGAGGAGCTCCCCC...CTGGGTGTCCCAGCTCTGCTGGTGGTGCCCAGTCCAGTAACAGTCCACAGAAGA 62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS TCA 90 bp | CTGCAAGAGGGAAGGCTGCAGGTGGCTGAAGCATCGGTCGGGCACTaGAGGCGTGATGTCAGAGAAACCAGTGTCCCAGCCGTCGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LQEGRLQVAEASVGH*RRDVRETSVPAVAV Trigger: GACAGCGACGGCTGGGACACTGGTTTCTCTGACATCACGCCTTCAGTGCCCGACCGATGCTTCAGCCACCTGCAGCCTTCCCTCTTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CCA 90 bp | GAGGGTGTGTCAGAGTCCCAGCCTGAGCAGGGGTCAGCAGACGCCTaGGGAATATCCTGCATGGTGGGGCTTGAGGGAGTCTCCACATAT | + |
|
Preference number: 5 (lower is better) Translates to: EGVSESQPEQGSADA*GISCMVGLEGVSTY Trigger: ATATGTGGAGACTCCCTCAAGCCCCACCATGCAGGATATTCCCCAGGCGTCTGCTGACCCCTGCTCAGGCTGGGACTCTGACACACCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CCA 90 bp | TCCGGGAGCCCATTCGGGACCGGTTGGAGCGACGGATATCAAACTTaGAGTCCCGGCACTTTTGGCAGACAAAAACTTCCGGGACATTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGSPFGTGWSDGYQT*SPGTFGRQKLPGHW Trigger: CCAATGTCCCGGAAGTTTTTGTCTGCCAAAAGTGCCGGGACTCCAAGTTTGATATCCGTCGCTCCAACCGGTCCCGAATGGGCTCCCGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS-3UTR CAA 90 bp | GCCCAGCTCAACCTACCCCCAAACCAAGGTGTCCAAATTCTGACACCACCCACACCTGCATGGTGGGGCTaGAGGGAGTCTCCACATATG | + |
|
Preference number: 5 (lower is better) Translates to: AQLNLPPNQGVQILTPPTPAWWG*RESPHM Trigger: CATATGTGGAGACTCCCTCAAGCCCCACCATGCAGG...TGTGGGTGGTGTCAGAATTTGGACACCTTGGTTTGGGGGTAGGTTGAGCTGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS TCA 90 bp | AAAACTTCCGGGACATTGGACTTGCGGATCTTTGCACAGGACAGGTaGATCCAGGTGTGGCACTCGTTACACTCGATCATGGGGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KTSGTLDLRIFAQDR*IQVWHSLHSIMGRP Trigger: CGGCCGCCCCATGATCGAGTGTAACGAGTGCCACACCTGGATTCACCTGTCCTGTGCAAAGATCCGCAAGTCCAATGTCCCGGAAGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS-3UTR CAA 90 bp | GAGTTCTGTGCTCAACTAAGGGAGGCTAGAGCCCAGGCCCTTCCAGTCCCGCCTTCTTCAGCTTGTCAGTaGTCTTCCTGTCCAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EFCAQLREARAQALPVPPSSACQ*SSCPEG Trigger: ACCTTCTGGACAGGAAGACAACTGACAAGCTGAAGA...AGGCGGGACTGGAAGGGCCTGGGCTCTAGCCTCCCTTAGTTGAGCACAGAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS-3UTR CAA 90 bp | GCCCAGCTCAACCTACCCCCAAACCAAGGTGTCCAAATTCTGACACCACCCACATGGACTTGCGGATCTTaGCACAGGACAGGTGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: AQLNLPPNQGVQILTPPTWTCGS*HRTGES Trigger: GGATTCACCTGTCCTGTGCAAAGATCCGCAAGTCCA...TGTGGGTGGTGTCAGAATTTGGACACCTTGGTTTGGGGGTAGGTTGAGCTGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS GCA 90 bp | AGTCCCGGCACTTTTGGCAGACAAAAACTTCCGGGACATTGGACTTaGGGATCTTTGCACAGGACAGGTGAATCCAGGTGTGGCACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SPGTFGRQKLPGHWT*GSLHRTGESRCGTR Trigger: ACGAGTGCCACACCTGGATTCACCTGTCCTGTGCAAAGATCCGCAAGTCCAATGTCCCGGAAGTTTTTGTCTGCCAAAAGTGCCGGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CCA 90 bp | ACTTGGAGTCCCGGCACTTTTGGCAGACAAAAACTTCCGGGACATTaGACTTGCGGATCTTTGCACAGGACAGGTGAATCCAGGTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TWSPGTFGRQKLPGH*TCGSLHRTGESRCG Trigger: GCCACACCTGGATTCACCTGTCCTGTGCAAAGATCCGCAAGTCCAATGTCCCGGAAGTTTTTGTCTGCCAAAAGTGCCGGGACTCCAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CCA 90 bp | GACCGGTTGGAGCGACGGATATCAAACTTGGAGTCCCGGCACTTTTaGCAGACAAAAACTTCCGGGACATTGGACTTGCGGATCTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DRLERRISNLESRHF*QTKTSGTLDLRIFA Trigger: TGCAAAGATCCGCAAGTCCAATGTCCCGGAAGTTTTTGTCTGCCAAAAGTGCCGGGACTCCAAGTTTGATATCCGTCGCTCCAACCGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS-3UTR CAA 90 bp | GACAACAACTGTCATGGGGCAGGTCTTTGGCAAATTCCTCTAACTTGTCCTGGGGGAGTCCCGGCACTTTaGGCAGACAAAAACTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: DNNCHGAGLWQIPLTCPGGVPAL*ADKNFR Trigger: CCGGAAGTTTTTGTCTGCCAAAAGTGCCGGGACTCC...CCCAGGACAAGTTAGAGGAATTTGCCAAAGACCTGCCCCATGACAGTTGTTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS GCA 90 bp | CTTTTGGCAGACAAAAACTTCCGGGACATTGGACTTGCGGATCTTTaGACAGGACAGGTGAATCCAGGTGTGGCACTCGTTACACTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLADKNFRDIGLADL*TGQVNPGVALVTLD Trigger: ATCGAGTGTAACGAGTGCCACACCTGGATTCACCTGTCCTGTGCAAAGATCCGCAAGTCCAATGTCCCGGAAGTTTTTGTCTGCCAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS-3UTR CAA 90 bp | GACAACAACTGTCATGGGGCAGGTCTTTGGCAAATTCCTCTAACTTGTCCTGGGACGAAGGTGCAGAATTaGTTGAAGTCTTCCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: DNNCHGAGLWQIPLTCPGTKVQN*LKSSTV Trigger: GACTGTGGAAGACTTCAACAAATTCTGCACCTTCGT...CCCAGGACAAGTTAGAGGAATTTGCCAAAGACCTGCCCCATGACAGTTGTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS-3UTR CAA 90 bp | AAACACTACGGAGAAAGAATGAGCACTGGAGATGCTGGTTTGAGAGCCAACGCCATGATGTCTTCATCATaGCCAGTGCTGTCTTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KHYGERMSTGDAGLRANAMMSSS*PVLSSS Trigger: AGACGAAGACAGCACTGGCAATGATGAAGACATCAT...GGCGTTGGCTCTCAAACCAGCATCTCCAGTGCTCATTCTTTCTCCGTAGTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS GCA 90 bp | ATGTCTTCATCATTGCCAGTGCTGTCTTCGTCTCGGAACACCACCTaGTTTCCCTGGCGGACAATAGTCCGTTTTCCTTCAGTTTTTATT | + |
|
Preference number: 5 (lower is better) Translates to: MSSSLPVLSSSRNTT*FPWRTIVRFPSVFI Trigger: AATAAAAACTGAAGGAAAACGGACTATTGTCCGCCAGGGAAAGCAGGTGGTGTTCCGAGACGAAGACAGCACTGGCAATGATGAAGACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS-3UTR CAA 90 bp | AATAATGGCCAGCTCCACTGTTCCACAACAAAACCACACATATTCTTAAATGCATTCTTCTTCTTCAGCTaGTCAGTTGTCTTCCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NNGQLHCSTTKPHIFLNAFFFFS*SVVFLS Trigger: GGACAGGAAGACAACTGACAAGCTGAAGAAGAAGAA...TGCATTTAAGAATATGTGTGGTTTTGTTGTGGAACAGTGGAGCTGGCCATTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CCA 72 bp | CCCAGCCGTCGCTGTCAATGGTCCCGGCAGTGCTGTTaGCGGGGCTGGGACTGCTCCTCAGGGGGAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PSRRCQWSRQCC*RGWDCSSGGAP Trigger: AGGAGCTCCCCCTGAGGAGCAGTCCCAGCCCCGCCAACAGCACTGCCGGGACCATTGACAGCGACGGCTGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CAA 72 bp | TCCCAGCCGTCGCTGTCAATGGTCCCGGCAGTGCTGTaGGCGGGGCTGGGACTGCTCCTCAGGGGGAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SQPSLSMVPAVL*AGLGLLLRGSS Trigger: GGAGCTCCCCCTGAGGAGCAGTCCCAGCCCCGCCAACAGCACTGCCGGGACCATTGACAGCGACGGCTGGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS GCA 72 bp | CAGTGTCCCAGCCGTCGCTGTCAATGGTCCCGGCAGTaGTGTTGGCGGGGCTGGGACTGCTCCTCAGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: QCPSRRCQWSRQ*CWRGWDCSSGG Trigger: TCCCCCTGAGGAGCAGTCCCAGCCCCGCCAACAGCACTGCCGGGACCATTGACAGCGACGGCTGGGACACTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CCA 72 bp | CGCTGTCAATGGTCCCGGCAGTGCTGTTGGCGGGGCTaGGACTGCTCCTCAGGGGGAGCTCCTCCTTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RCQWSRQCCWRG*DCSSGGAPPLG Trigger: ACCCAAAGGAGGAGCTCCCCCTGAGGAGCAGTCCCAGCCCCGCCAACAGCACTGCCGGGACCATTGACAGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CAA 90 bp | AAACCAGTGTCCCAGCCGTCGCTGTCAATGGTCCCGGCAGTGCTGTaGGCGGGGCTGGGACTGCTCCTCAGGGGGAGCTCCTCCTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: KPVSQPSLSMVPAVL*AGLGLLLRGSSSFG Trigger: CCCAAAGGAGGAGCTCCCCCTGAGGAGCAGTCCCAGCCCCGCCAACAGCACTGCCGGGACCATTGACAGCGACGGCTGGGACACTGGTTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CCA 72 bp | TGTCAGAGAAACCAGTGTCCCAGCCGTCGCTGTCAATaGTCCCGGCAGTGCTGTTGGCGGGGCTGGGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: CQRNQCPSRRCQ*SRQCCWRGWDC Trigger: GCAGTCCCAGCCCCGCCAACAGCACTGCCGGGACCATTGACAGCGACGGCTGGGACACTGGTTTCTCTGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CCA 72 bp | TCAGAGTCCCAGCCTGAGCAGGGGTCAGCAGACGCCTaGGGAATATCCTGCATGGTGGGGCTTGAGGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SESQPEQGSADA*GISCMVGLEGV Trigger: GACTCCCTCAAGCCCCACCATGCAGGATATTCCCCAGGCGTCTGCTGACCCCTGCTCAGGCTGGGACTCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS TCA 72 bp | GGAAGGCTGCAGGTGGCTGAAGCATCGGTCGGGCACTaGAGGCGTGATGTCAGAGAAACCAGTGTCCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GRLQVAEASVGH*RRDVRETSVPA Trigger: GGCTGGGACACTGGTTTCTCTGACATCACGCCTTCAGTGCCCGACCGATGCTTCAGCCACCTGCAGCCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CCA 72 bp | CCAGAAACAGCTTCCGGGAGCCCATTCGGGACCGGTTaGAGCGACGGATATCAAACTTGGAGTCCCGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: PETASGSPFGTG*SDGYQTWSPGT Trigger: AGTGCCGGGACTCCAAGTTTGATATCCGTCGCTCCAACCGGTCCCGAATGGGCTCCCGGAAGCTGTTTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CAA 72 bp | TCCAGAAACAGCTTCCGGGAGCCCATTCGGGACCGGTaGGAGCGACGGATATCAAACTTGGAGTCCCGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SRNSFREPIRDR*ERRISNLESRH Trigger: GTGCCGGGACTCCAAGTTTGATATCCGTCGCTCCAACCGGTCCCGAATGGGCTCCCGGAAGCTGTTTCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CAA 72 bp | CAGCAGACGCCTGGGGAATATCCTGCATGGTGGGGCTaGAGGGAGTCTCCACATATGGGTCTGCAGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QQTPGEYPAWWG*RESPHMGLQLP Trigger: TGGAAGCTGCAGACCCATATGTGGAGACTCCCTCAAGCCCCACCATGCAGGATATTCCCCAGGCGTCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CAA 90 bp | TTCCGGGAGCCCATTCGGGACCGGTTGGAGCGACGGATATCAAACTaGGAGTCCCGGCACTTTTGGCAGACAAAAACTTCCGGGACATTG | + |
|
Preference number: 6 (lower is better) Translates to: FREPIRDRLERRISN*ESRHFWQTKTSGTL Trigger: CAATGTCCCGGAAGTTTTTGTCTGCCAAAAGTGCCGGGACTCCAAGTTTGATATCCGTCGCTCCAACCGGTCCCGAATGGGCTCCCGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CCA 72 bp | CCATTCGGGACCGGTTGGAGCGACGGATATCAAACTTaGAGTCCCGGCACTTTTGGCAGACAAAAACTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PFGTGWSDGYQT*SPGTFGRQKLP Trigger: CGGAAGTTTTTGTCTGCCAAAAGTGCCGGGACTCCAAGTTTGATATCCGTCGCTCCAACCGGTCCCGAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CAA 72 bp | CCCATTCGGGACCGGTTGGAGCGACGGATATCAAACTaGGAGTCCCGGCACTTTTGGCAGACAAAAACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PIRDRLERRISN*ESRHFWQTKTS Trigger: GGAAGTTTTTGTCTGCCAAAAGTGCCGGGACTCCAAGTTTGATATCCGTCGCTCCAACCGGTCCCGAATGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS CAA 90 bp | GGACCGGTTGGAGCGACGGATATCAAACTTGGAGTCCCGGCACTTTaGGCAGACAAAAACTTCCGGGACATTGGACTTGCGGATCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GPVGATDIKLGVPAL*ADKNFRDIGLADLC Trigger: GCAAAGATCCGCAAGTCCAATGTCCCGGAAGTTTTTGTCTGCCAAAAGTGCCGGGACTCCAAGTTTGATATCCGTCGCTCCAACCGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS TCA 72 bp | GGGACATTGGACTTGCGGATCTTTGCACAGGACAGGTaGATCCAGGTGTGGCACTCGTTACACTCGATCATG | + |
|
Preference number: 6 (lower is better) Translates to: GTLDLRIFAQDR*IQVWHSLHSIM Trigger: CATGATCGAGTGTAACGAGTGCCACACCTGGATTCACCTGTCCTGTGCAAAGATCCGCAAGTCCAATGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS GCA 72 bp | TCATTGCCAGTGCTGTCTTCGTCTCGGAACACCACCTaGTTTCCCTGGCGGACAATAGTCCGTTTTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLPVLSSSRNTT*FPWRTIVRFPS Trigger: TGAAGGAAAACGGACTATTGTCCGCCAGGGAAAGCAGGTGGTGTTCCGAGACGAAGACAGCACTGGCAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CCA 72 bp | CCCGGCACTTTTGGCAGACAAAAACTTCCGGGACATTaGACTTGCGGATCTTTGCACAGGACAGGTGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: PGTFGRQKLPGH*TCGSLHRTGES Trigger: GGATTCACCTGTCCTGTGCAAAGATCCGCAAGTCCAATGTCCCGGAAGTTTTTGTCTGCCAAAAGTGCCGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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| CDS CCA 72 bp | GAGCGACGGATATCAAACTTGGAGTCCCGGCACTTTTaGCAGACAAAAACTTCCGGGACATTGGACTTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: ERRISNLESRHF*QTKTSGTLDLR Trigger: CCGCAAGTCCAATGTCCCGGAAGTTTTTGTCTGCCAAAAGTGCCGGGACTCCAAGTTTGATATCCGTCGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS CAA 72 bp | GGAGCGACGGATATCAAACTTGGAGTCCCGGCACTTTaGGCAGACAAAAACTTCCGGGACATTGGACTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: GATDIKLGVPAL*ADKNFRDIGLA Trigger: CGCAAGTCCAATGTCCCGGAAGTTTTTGTCTGCCAAAAGTGCCGGGACTCCAAGTTTGATATCCGTCGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS CAA 90 bp | AGGTCCCAGGAATCATCATCTGAGTCCACCATGATGTCTTCATCATaGCCAGTGCTGTCTTCGTCTCGGAACACCACCTGCTTTCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSQESSSESTMMSSS*PVLSSSRNTTCFPW Trigger: CCAGGGAAAGCAGGTGGTGTTCCGAGACGAAGACAGCACTGGCAATGATGAAGACATCATGGTGGACTCAGATGATGATTCCTGGGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS GCA 72 bp | GACAAAAACTTCCGGGACATTGGACTTGCGGATCTTTaGACAGGACAGGTGAATCCAGGTGTGGCACTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: DKNFRDIGLADL*TGQVNPGVALV Trigger: AACGAGTGCCACACCTGGATTCACCTGTCCTGTGCAAAGATCCGCAAGTCCAATGTCCCGGAAGTTTTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS CAA 72 bp | GAATCATCATCTGAGTCCACCATGATGTCTTCATCATaGCCAGTGCTGTCTTCGTCTCGGAACACCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ESSSESTMMSSS*PVLSSSRNTTC Trigger: GCAGGTGGTGTTCCGAGACGAAGACAGCACTGGCAATGATGAAGACATCATGGTGGACTCAGATGATGATTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
||
| CDS CCA 72 bp | GTGCTGTCTTCGTCTCGGAACACCACCTGCTTTCCCTaGCGGACAATAGTCCGTTTTCCTTCAGTTTTTATT | + |
|
Preference number: 6 (lower is better) Translates to: VLSSSRNTTCFP*RTIVRFPSVFI Trigger: AATAAAAACTGAAGGAAAACGGACTATTGTCCGCCAGGGAAAGCAGGTGGTGTTCCGAGACGAAGACAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055688.10 |
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