Pregenerated sensors for PHF11D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068245Ensembl transcript IDs: ENSMUST00000095157.11, ENSMUST00000160425.8, ENSMUST00000161031.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATGAGAAGAGAGGAGACAAGAAACACCCAGCCAGGTATGGAGCATaGATGAGCAGTAGCAGGTCAGAGCGGGAGGGGACTGTGGATCTG | + |
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Preference number: 1 (lower is better) Translates to: DEKRGDKKHPARYGA*MSSSRSEREGTVDL Trigger: CAGATCCACAGTCCCCTCCCGCTCTGACCTGCTACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTCTCCTCTCTTCTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
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| 3UTR CCA 90 bp | ATTCCATTTAAGGCTGAGCAAAGCTCTGGTGTTGCTGCCCTTGACTaGGGTGGGCAGGGTAGGCAGGAAGACTTCCTCGATCCTTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: IPFKAEQSSGVAALD*GGQGRQEDFLDPWR Trigger: TCTCCAAGGATCGAGGAAGTCTTCCTGCCTACCCTGCCCACCCCAGTCAAGGGCAGCAACACCAGAGCTTTGCTCAGCCTTAAATGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 |
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| 3UTR TCA 90 bp | CATGCTGGGACACAGCTCAATCCAATTCTGTCAGGCGCATTACTGTaGCCCAGAGGATCATGGGAGGAAATGAGAAATGTGGATGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: HAGTQLNPILSGALL*PRGSWEEMRNVDVR Trigger: TCTCACATCCACATTTCTCATTTCCTCCCATGATCCTCTGGGTCACAGTAATGCGCCTGACAGAATTGGATTGAGCTGTGTCCCAGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| 3UTR CCA 90 bp | AATGAGAAATGTGGATGTGAGAGGAGTCAAGGGTCAGGGGCAGTGTaGGTACACAGATCTGATGCATACTGTCAGGTGGGGAAAGTCTTA | + |
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Preference number: 1 (lower is better) Translates to: NEKCGCERSQGSGAV*VHRSDAYCQVGKVL Trigger: TAAGACTTTCCCCACCTGACAGTATGCATCAGATCTGTGTACCCACACTGCCCCTGACCCTTGACTCCTCTCACATCCACATTTCTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| 3UTR-3UTR TCA 90 bp | CTTCCGGAGGCCAGAGGGCAACAAGGCCAGAGTTTAGCTCTCTGGGTTCTGGTATCAGGCGCATTACTGTaGCCCAGAGGATCATGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LPEARGQQGQSLALWVLVSGALL*PRGSWE Trigger: CTCCCATGATCCTCTGGGTCACAGTAATGCGCCTGA...TACCAGAACCCAGAGAGCTAAACTCTGGCCTTGTTGCCCTCTGGCCTCCGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| 3UTR-3UTR TCA 90 bp | AGTCAAGGGTCAGGGGCAGTGTGGGTACACAGATCTGATGCATACTGTCAGGTGGTGTCTTGCTACATCTaGGGGCTGCCTGGGACTGTA | + |
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Preference number: 2 (lower is better) Translates to: SQGSGAVWVHRSDAYCQVVSCYI*GLPGTV Trigger: TACAGTCCCAGGCAGCCCTCAGATGTAGCAAGACAC...CACCTGACAGTATGCATCAGATCTGTGTACCCACACTGCCCCTGACCCTTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| 3UTR CAA 90 bp | CTAAGATTCCATTTAAGGCTGAGCAAAGCTCTGGTGTTGCTGCCCTaGACTGGGGTGGGCAGGGTAGGCAGGAAGACTTCCTCGATCCTT | + |
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Preference number: 2 (lower is better) Translates to: LRFHLRLSKALVLLP*TGVGRVGRKTSSIL Trigger: AAGGATCGAGGAAGTCTTCCTGCCTACCCTGCCCACCCCAGTCAAGGGCAGCAACACCAGAGCTTTGCTCAGCCTTAAATGGAATCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 |
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| 3UTR CAA 90 bp | GAGAAAGCTCTAAGATTCCATTTAAGGCTGAGCAAAGCTCTGGTGTaGCTGCCCTTGACTGGGGTGGGCAGGGTAGGCAGGAAGACTTCC | + |
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Preference number: 2 (lower is better) Translates to: EKALRFHLRLSKALV*LPLTGVGRVGRKTS Trigger: GGAAGTCTTCCTGCCTACCCTGCCCACCCCAGTCAAGGGCAGCAACACCAGAGCTTTGCTCAGCCTTAAATGGAATCTTAGAGCTTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCCGGAGGCCAGAGGGCAACAAGGCCAGAGTTTAGCTCTCTGGGTTCTGGTATATACATCTACATTATaGACACCAAACGTGGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: LPEARGQQGQSLALWVLVYTSTL*TPNVVL Trigger: AAGCACCACGTTTGGTGTTCATAATGTAGATGTATA...TACCAGAACCCAGAGAGCTAAACTCTGGCCTTGTTGCCCTCTGGCCTCCGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| 3UTR-3UTR GCA 90 bp | CAAAGAGCCCAGATTCAAAAGCTGGAGTTGGTCTTGAACATGAAGCATGCCCTTGGTAACAGTGTGCAATaGACAGTGTTGAGTTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: QRAQIQKLELVLNMKHALGNSVQ*TVLSLL Trigger: GAGCAAACTCAACACTGTGCATTGCACACTGTTACC...AAGGGCATGCTTCATGTTCAAGACCAACTCCAGCTTTTGAATCTGGGCTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| 3UTR-3UTR CAA 90 bp | CTTCCGGAGGCCAGAGGGCAACAAGGCCAGAGTTTAGCTCTCTGGGTTCTGGTAAGAGTGCATTGTGTCTaGCTACATCTGAGGGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: LPEARGQQGQSLALWVLVRVHCV*LHLRAA Trigger: GGCAGCCCTCAGATGTAGCAAGACACAATGCACTCT...TACCAGAACCCAGAGAGCTAAACTCTGGCCTTGTTGCCCTCTGGCCTCCGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| 3UTR TCA 72 bp | GAGTCAAGGGTCAGGGGCAGTGTGGGTACACAGATCTaGTGCATACTGTCAGGTGGGGAAAGTCTTAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: ESRVRGSVGTQI*CILSGGESLSA Trigger: AGCACTAAGACTTTCCCCACCTGACAGTATGCATCAGATCTGTGTACCCACACTGCCCCTGACCCTTGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| 3UTR TCA 72 bp | GGTGCTCAGATGGCAGTCATTCCAGTTGATCCCTCCTaGAGTGGCTTAGACAGGCCTTGGTACCCACAGTAT | + |
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Preference number: 3 (lower is better) Translates to: GAQMAVIPVDPS*SGLDRPWYPQY Trigger: ATACTGTGGGTACCAAGGCCTGTCTAAGCCACTTCAGGAGGGATCAACTGGAATGACTGCCATCTGAGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| 3UTR-3UTR CAA 90 bp | AGCAGCAGAGGAAGCACTAACATAAAAGGGTCCCAGCTGGTTCTGACAGGTGCTTGGCTTAGACAGGCCTaGGTACCCACAGTATTGCAC | + |
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Preference number: 3 (lower is better) Translates to: SSRGSTNIKGSQLVLTGAWLRQA*VPTVLH Trigger: GTGCAATACTGTGGGTACCAAGGCCTGTCTAAGCCA...AGCACCTGTCAGAACCAGCTGGGACCCTTTTATGTTAGTGCTTCCTCTGCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| 3UTR-3UTR CAA 90 bp | AGTGGAGACCATGATGAGGCCATCTGTAGGAGTAGCAGAAGCAAGAGAAAGCTCTGCACAGTGTTGAGTTaGCTCTATGCTGATGGAGTT | + |
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Preference number: 3 (lower is better) Translates to: SGDHDEAICRSSRSKRKLCTVLS*LYADGV Trigger: AACTCCATCAGCATAGAGCAAACTCAACACTGTGCA...GAGCTTTCTCTTGCTTCTGCTACTCCTACAGATGGCCTCATCATGGTCTCCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 |
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| 3UTR TCA 72 bp | AGACAGGCCTTGGTACCCACAGTATTGCACCAGGAGTaGTTCCTTCACAAGTGTGTGAGCACACATAACAAA | + |
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Preference number: 3 (lower is better) Translates to: RQALVPTVLHQE*FLHKCVSTHNK Trigger: TTTGTTATGTGTGCTCACACACTTGTGAAGGAATCACTCCTGGTGCAATACTGTGGGTACCAAGGCCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| 3UTR-3UTR CAA 90 bp | CAAAGAGCCCAGATTCAAAAGCTGGAGTTGGTCTTGAACATGAAGCATGCCCTTGTGCAATGCACAGTGTaGAGTTTGCTCTATGCTGAT | + |
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Preference number: 3 (lower is better) Translates to: QRAQIQKLELVLNMKHALVQCTV*SLLYAD Trigger: ATCAGCATAGAGCAAACTCAACACTGTGCATTGCAC...AAGGGCATGCTTCATGTTCAAGACCAACTCCAGCTTTTGAATCTGGGCTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| 3UTR TCA 72 bp | GTAAAAACAGAAGAGTGCATTGTGTCTTGCTACATCTaGGGGCTGCCTGGGACTGTATTAAATAAACGGTGC | + |
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Preference number: 3 (lower is better) Translates to: VKTEECIVSCYI*GLPGTVLNKRC Trigger: GCACCGTTTATTTAATACAGTCCCAGGCAGCCCTCAGATGTAGCAAGACACAATGCACTCTTCTGTTTTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| 3UTR-3UTR CAA 90 bp | AGCAATACTGTGTCAACTAGTTCTCAACTACCTCAGGAAGCAAAAGATCTTATTGATAGAAGAGGACTGTaGAACTTCCTATGTAAAAAG | + |
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Preference number: 3 (lower is better) Translates to: SNTVSTSSQLPQEAKDLIDRRGL*NFLCKK Trigger: CTTTTTACATAGGAAGTTCAACAGTCCTCTTCTATC...AATAAGATCTTTTGCTTCCTGAGGTAGTTGAGAACTAGTTGACACAGTATTGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| 3UTR TCA 72 bp | AAGCAAAAGATCTTATTTCTGATAGAAGAGGACTGTTaGACTTCCTATGTAAAAAGCCACTATCCTCATAAG | + |
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Preference number: 3 (lower is better) Translates to: KQKILFLIEEDC*TSYVKSHYPHK Trigger: CTTATGAGGATAGTGGCTTTTTACATAGGAAGTTCAACAGTCCTCTTCTATCAGAAATAAGATCTTTTGCTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| CDS-3UTR TCA 90 bp | GACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTAGCAGGTCAGAGGAGACTCCTGGGATCTaGCCTGGTGGTCCTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: DKKHPARYGAWMSSSRSEETPGI*PGGPQE Trigger: CTCCTGAGGACCACCAGGTCAGATCCCAGGAGTCTC...CTCTGACCTGCTACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
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| CDS-3UTR TCA 90 bp | GAGAAGAGAGGAGACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTGAGACTCCTGGGATCTaGCCTGGTGGTCCTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: EKRGDKKHPARYGAWMSSETPGI*PGGPQE Trigger: CTCCTGAGGACCACCAGGTCAGATCCCAGGAGTCTC...ACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTCTCCTCTCTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
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| CDS-3UTR CCA 90 bp | AGCAGCAGAGGAAGCACTAACATAAAAGGGTCCCAGCTGGTTCTGACAGGTGCTGACTGGGCCACACGGTaGTGCTGTCTCTTGGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SSRGSTNIKGSQLVLTGADWATR*CCLLGH Trigger: ATGGCCCAAGAGACAGCACCACCGTGTGGCCCAGTC...AGCACCTGTCAGAACCAGCTGGGACCCTTTTATGTTAGTGCTTCCTCTGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| CDS-3UTR CCA 90 bp | GAGAAGAGAGGAGACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTGACTGGGCCACACGGTaGTGCTGTCTCTTGGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: EKRGDKKHPARYGAWMSSDWATR*CCLLGH Trigger: ATGGCCCAAGAGACAGCACCACCGTGTGGCCCAGTC...ACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTCTCCTCTCTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
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| CDS-3UTR CCA 90 bp | AGTGGAGACCATGATGAGGCCATCTGTAGGAGTAGCAGAAGCAAGAGAAAGCTCGACTGGGCCACACGGTaGTGCTGTCTCTTGGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SGDHDEAICRSSRSKRKLDWATR*CCLLGH Trigger: ATGGCCCAAGAGACAGCACCACCGTGTGGCCCAGTC...GAGCTTTCTCTTGCTTCTGCTACTCCTACAGATGGCCTCATCATGGTCTCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 |
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| CDS-3UTR CCA 90 bp | GAGAAGAGAGGAGACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTTCCTGGGATCTGACCTaGTGGTCCTCAGGAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: EKRGDKKHPARYGAWMSSSWDLT*WSSGGS Trigger: GCTACCTCCTGAGGACCACCAGGTCAGATCCCAGGA...ACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTCTCCTCTCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
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| CDS-3UTR GCA 90 bp | GACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTAGCAGGTCAGAGGCAAGTGCCTCAAGCTaGTGCTTCATCTGCCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: DKKHPARYGAWMSSSRSEASASS*CFICLC Trigger: GCAAAGGCAGATGAAGCAGCAGCTTGAGGCACTTGC...CTCTGACCTGCTACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
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| CDS-3UTR GCA 90 bp | GACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTAGCAGGTCAGAGAGTGCCTCAAGCTGCTaGTTCATCTGCCTTTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: DKKHPARYGAWMSSSRSESASSC*FICLCL Trigger: AAGGCAAAGGCAGATGAAGCAGCAGCTTGAGGCACT...CTCTGACCTGCTACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
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| CDS-3UTR CCA 90 bp | CTTCCGGAGGCCAGAGGGCAACAAGGCCAGAGTTTAGCTCTCTGGGTTCTGGTAGGCCTCTTCTTGTTCTaGAGAATGTTCTGGGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: LPEARGQQGQSLALWVLVGLFLF*RMFWAK Trigger: TTTTGCCCAGAACATTCTCCAGAACAAGAAGAGGCC...TACCAGAACCCAGAGAGCTAAACTCTGGCCTTGTTGCCCTCTGGCCTCCGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| CDS-3UTR GCA 90 bp | TTCCTCGATCCTTGGAGAACATGGAGGCCCCATCCAGTTTTCCTGAGGAACAGCAGCTGCTGCTTCATCTaGCTTTGCCTTTCTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: FLDPWRTWRPHPVFLRNSSCCFI*LCLSSH Trigger: ATGGGAAGAAAGGCAAAGGCAGATGAAGCAGCAGCT...GCTGTTCCTCAGGAAAACTGGATGGGGCCTCCATGTTCTCCAAGGATCGAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 |
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| CDS-3UTR CCA 90 bp | GACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTAGCAGGTCAGAGCATCAGCACTTTCAGTaGCCTCTTCTTGTTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: DKKHPARYGAWMSSSRSEHQHFQ*PLLVLE Trigger: CTCCAGAACAAGAAGAGGCCACTGAAAGTGCTGATG...CTCTGACCTGCTACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
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| CDS-3UTR GCA 90 bp | AGCAGCAGAGGAAGCACTAACATAAAAGGGTCCCAGCTGGTTCTGACAGGTGCTAGCTGCTGCTTCATCTaGCTTTGCCTTTCTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: SSRGSTNIKGSQLVLTGASCCFI*LCLSSH Trigger: ATGGGAAGAAAGGCAAAGGCAGATGAAGCAGCAGCT...AGCACCTGTCAGAACCAGCTGGGACCCTTTTATGTTAGTGCTTCCTCTGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| CDS-3UTR GCA 90 bp | GAGAAGAGAGGAGACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTAGCTGCTGCTTCATCTaGCTTTGCCTTTCTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: EKRGDKKHPARYGAWMSSSCCFI*LCLSSH Trigger: ATGGGAAGAAAGGCAAAGGCAGATGAAGCAGCAGCT...ACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTCTCCTCTCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
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| CDS-3UTR GCA 90 bp | AGTGGAGACCATGATGAGGCCATCTGTAGGAGTAGCAGAAGCAAGAGAAAGCTCAGTGCCTCAAGCTGCTaGTTCATCTGCCTTTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: SGDHDEAICRSSRSKRKLSASSC*FICLCL Trigger: AAGGCAAAGGCAGATGAAGCAGCAGCTTGAGGCACT...GAGCTTTCTCTTGCTTCTGCTACTCCTACAGATGGCCTCATCATGGTCTCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 |
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| CDS-3UTR CCA 90 bp | GAGAAGAGAGGAGACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTCATCAGCACTTTCAGTaGCCTCTTCTTGTTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: EKRGDKKHPARYGAWMSSHQHFQ*PLLVLE Trigger: CTCCAGAACAAGAAGAGGCCACTGAAAGTGCTGATG...ACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTCTCCTCTCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
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| CDS-3UTR GCA 90 bp | GACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTAGCAGGTCAGAGTGCTTCATCTGCCTTTaGCTTTCTTCCCATTCACAA | + |
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Preference number: 4 (lower is better) Translates to: DKKHPARYGAWMSSSRSECFICL*LSSHSQ Trigger: TTGTGAATGGGAAGAAAGGCAAAGGCAGATGAAGCA...CTCTGACCTGCTACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
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| CDS-3UTR CCA 90 bp | AGTCAAGGGTCAGGGGCAGTGTGGGTACACAGATCTGATGCATACTGTCAGGTGTTGCTTGGTCCTTTTTaGCACAGACATAGTGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: SQGSGAVWVHRSDAYCQVLLGPF*HRHSGN Trigger: GTTACCACTATGTCTGTGCCAAAAAGGACCAAGCAA...CACCTGACAGTATGCATCAGATCTGTGTACCCACACTGCCCCTGACCCTTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
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| CDS-3UTR CCA 90 bp | TTCCTCGATCCTTGGAGAACATGGAGGCCCCATCCAGTTTTCCTGAGGAACAGCTTGCTTGGTCCTTTTTaGCACAGACATAGTGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: FLDPWRTWRPHPVFLRNSLLGPF*HRHSGN Trigger: GTTACCACTATGTCTGTGCCAAAAAGGACCAAGCAA...GCTGTTCCTCAGGAAAACTGGATGGGGCCTCCATGTTCTCCAAGGATCGAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 |
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| CDS-3UTR CCA 90 bp | GAGAAGAGAGGAGACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTGGCCTCTTCTTGTTCTaGAGAATGTTCTGGGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: EKRGDKKHPARYGAWMSSGLFLF*RMFWAK Trigger: TTTTGCCCAGAACATTCTCCAGAACAAGAAGAGGCC...ACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTCTCCTCTCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
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| CDS-3UTR CCA 90 bp | TTCCTCGATCCTTGGAGAACATGGAGGCCCCATCCAGTTTTCCTGAGGAACAGCCTTCTTCTTCATGCTTaGGTCATCAGCACTTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: FLDPWRTWRPHPVFLRNSLLLHA*VISTFS Trigger: ACTGAAAGTGCTGATGACCCAAGCATGAAGAAGAAG...GCTGTTCCTCAGGAAAACTGGATGGGGCCTCCATGTTCTCCAAGGATCGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 |
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| CDS-3UTR CCA 90 bp | GACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTAGCAGGTCAGAGCTTCTTCTTCATGCTTaGGTCATCAGCACTTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: DKKHPARYGAWMSSSRSELLLHA*VISTFS Trigger: ACTGAAAGTGCTGATGACCCAAGCATGAAGAAGAAG...CTCTGACCTGCTACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
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| CDS-3UTR TCA 90 bp | GAGAAGAGAGGAGACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTTTTCCATCTTTTCTATaGTTGGACTGTCACCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: EKRGDKKHPARYGAWMSSFPSFL*LDCHPL Trigger: CAAGGGGTGACAGTCCAATCATAGAAAAGATGGAAA...ACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTCTCCTCTCTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
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| CDS-3UTR TCA 90 bp | GAGAAGAGAGGAGACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTAGGTCCCCATTTTCTTaGAATGAGCACAAGCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: EKRGDKKHPARYGAWMSSRSPFS*NEHKLC Trigger: ACAAAGCTTGTGCTCATTTCAAGAAAATGGGGACCT...ACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTCTCCTCTCTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
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| CDS-3UTR GCA 90 bp | GACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTAGCAGGTCAGAGTTCAGTAAGAAGTCCTaGTTCCTGGCATTTCTTAAG | + |
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Preference number: 4 (lower is better) Translates to: DKKHPARYGAWMSSSRSEFSKKS*FLAFLK Trigger: CTTAAGAAATGCCAGGAAGCAGGACTTCTTACTGAA...CTCTGACCTGCTACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161031.2 |
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| CDS-3UTR GCA 90 bp | GAGAAGAGAGGAGACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTTGCTTCATCTGCCTTTaGCTTTCTTCCCATTCACAA | + |
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Preference number: 4 (lower is better) Translates to: EKRGDKKHPARYGAWMSSCFICL*LSSHSQ Trigger: TTGTGAATGGGAAGAAAGGCAAAGGCAGATGAAGCA...ACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTCTCCTCTCTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
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| CDS-3UTR CCA 90 bp | GAGAAGAGAGGAGACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTCTTCTTCTTCATGCTTaGGTCATCAGCACTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EKRGDKKHPARYGAWMSSLLLHA*VISTFS Trigger: ACTGAAAGTGCTGATGACCCAAGCATGAAGAAGAAG...ACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTCTCCTCTCTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS-3UTR TCA 90 bp | AGTGGAGACCATGATGAGGCCATCTGTAGGAGTAGCAGAAGCAAGAGAAAGCTCTTTCCATCTTTTCTATaGTTGGACTGTCACCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGDHDEAICRSSRSKRKLFPSFL*LDCHPL Trigger: CAAGGGGTGACAGTCCAATCATAGAAAAGATGGAAA...GAGCTTTCTCTTGCTTCTGCTACTCCTACAGATGGCCTCATCATGGTCTCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 |
||
| CDS-3UTR TCA 90 bp | AGTGGAGACCATGATGAGGCCATCTGTAGGAGTAGCAGAAGCAAGAGAAAGCTCAGGTCCCCATTTTCTTaGAATGAGCACAAGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGDHDEAICRSSRSKRKLRSPFS*NEHKLC Trigger: ACAAAGCTTGTGCTCATTTCAAGAAAATGGGGACCT...GAGCTTTCTCTTGCTTCTGCTACTCCTACAGATGGCCTCATCATGGTCTCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGAGACCATGATGAGGCCATCTGTAGGAGTAGCAGAAGCAAGAGAAAGCTCTGCTTCATCTGCCTTTaGCTTTCTTCCCATTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SGDHDEAICRSSRSKRKLCFICL*LSSHSQ Trigger: TTGTGAATGGGAAGAAAGGCAAAGGCAGATGAAGCA...GAGCTTTCTCTTGCTTCTGCTACTCCTACAGATGGCCTCATCATGGTCTCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 |
||
| CDS-3UTR CCA 90 bp | CTCGAGTCAAAGAGCCCAGATTCAAAAGCTGGAGTTGGTCTTGAACATGAAGCACATCAGCACTTTCAGTaGCCTCTTCTTGTTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LESKSPDSKAGVGLEHEAHQHFQ*PLLVLE Trigger: CTCCAGAACAAGAAGAGGCCACTGAAAGTGCTGATG...TGCTTCATGTTCAAGACCAACTCCAGCTTTTGAATCTGGGCTCTTTGACTCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
||
| CDS-3UTR TCA 90 bp | GAGAAGAGAGGAGACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTTCCTTTGTTACAGAATaGGCATTTCAATCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EKRGDKKHPARYGAWMSSSFVTE*AFQSSS Trigger: GGAAGAAGATTGAAATGCTCATTCTGTAACAAAGGA...ACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTCTCCTCTCTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGCAGAGGAAGCACTAACATAAAAGGGTCCCAGCTGGTTCTGACAGGTGCTTCCACAAGTCTTCCATaGACTGAATCCATATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSRGSTNIKGSQLVLTGASTSLP*TESIFS Trigger: AGAAAATATGGATTCAGTTCATGGAAGACTTGTGGA...AGCACCTGTCAGAACCAGCTGGGACCCTTTTATGTTAGTGCTTCCTCTGCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
||
| CDS-3UTR TCA 90 bp | GAGAAGAGAGGAGACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTTCCACAAGTCTTCCATaGACTGAATCCATATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EKRGDKKHPARYGAWMSSSTSLP*TESIFS Trigger: AGAAAATATGGATTCAGTTCATGGAAGACTTGTGGA...ACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTCTCCTCTCTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161031.2 |
||
| 3UTR CAA 72 bp | AGTCAAAGAGCCCAGATTCAAAAGCTGGAGTTGGTCTaGAACATGAAGCATGCCCTTGTAATGACTGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQRAQIQKLELV*NMKHALVMTDA Trigger: GGCATCAGTCATTACAAGGGCATGCTTCATGTTCAAGACCAACTCCAGCTTTTGAATCTGGGCTCTTTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
||
| 3UTR CAA 72 bp | TGCTCGAGTCAAAGAGCCCAGATTCAAAAGCTGGAGTaGGTCTTGAACATGAAGCATGCCCTTGTAATGACT | + |
|
Preference number: 4 (lower is better) Translates to: CSSQRAQIQKLE*VLNMKHALVMT Trigger: AGTCATTACAAGGGCATGCTTCATGTTCAAGACCAACTCCAGCTTTTGAATCTGGGCTCTTTGACTCGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
||
| CDS-3UTR GCA 90 bp | ATGCTTGTCTACAGCAATACTGTAGACAGCAATACTGTGTCAACTAGTTCTCAAGCAAGTGCCTCAAGCTaGTGCTTCATCTGCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: MLVYSNTVDSNTVSTSSQASASS*CFICLC Trigger: GCAAAGGCAGATGAAGCAGCAGCTTGAGGCACTTGC...TTGAGAACTAGTTGACACAGTATTGCTGTCTACAGTATTGCTGTAGACAAGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
||
| CDS-3UTR GCA 90 bp | ATGCTTGTCTACAGCAATACTGTAGACAGCAATACTGTGTCAACTAGTTCTCAAAGTGCCTCAAGCTGCTaGTTCATCTGCCTTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: MLVYSNTVDSNTVSTSSQSASSC*FICLCL Trigger: AAGGCAAAGGCAGATGAAGCAGCAGCTTGAGGCACT...TTGAGAACTAGTTGACACAGTATTGCTGTCTACAGTATTGCTGTAGACAAGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
||
| CDS-3UTR TCA 90 bp | AGGCCAGAGTTTAGCTCTCTGGGTTCTGGTATTAAACTGAGGGCTATGATTATTTGGTTTCCATCAACTTaGAGAATTGCTTGGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RPEFSSLGSGIKLRAMIIWFPST*RIAWSF Trigger: AAAGGACCAAGCAATTCTTCAAGTTGATGGAAACCA...AATAATCATAGCCCTCAGTTTAATACCAGAACCCAGAGAGCTAAACTCTGGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
||
| CDS-3UTR TCA 90 bp | ATGCTTGTCTACAGCAATACTGTAGACAGCAATACTGTGTCAACTAGTTCTCAATCCTTTGTTACAGAATaGGCATTTCAATCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MLVYSNTVDSNTVSTSSQSFVTE*AFQSSS Trigger: GGAAGAAGATTGAAATGCTCATTCTGTAACAAAGGA...TTGAGAACTAGTTGACACAGTATTGCTGTCTACAGTATTGCTGTAGACAAGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
||
| CDS-3UTR GCA 90 bp | AGCAATACTGTGTCAACTAGTTCTCAACTACCTCAGGAAGCAAAAGATCTTATTTTCAGTAAGAAGTCCTaGTTCCTGGCATTTCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNTVSTSSQLPQEAKDLIFSKKS*FLAFLK Trigger: CTTAAGAAATGCCAGGAAGCAGGACTTCTTACTGAA...AATAAGATCTTTTGCTTCCTGAGGTAGTTGAGAACTAGTTGACACAGTATTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
||
| CDS-3UTR CAA 90 bp | GACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTAGCAGGTCAGAGTACATTTCATCGTTTTaGGCTGTGCAGGAGGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: DKKHPARYGAWMSSSRSEYISSF*AVQEGL Trigger: CAGGCCCTCCTGCACAGCCAAAAACGATGAAATGTA...CTCTGACCTGCTACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCGGAGGCCAGAGGGCAACAAGGCCAGAGTTTAGCTCTCTGGGTTCTGGTACATCAACTTGAAGAATaGCTTGGTCCTTTTTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LPEARGQQGQSLALWVLVHQLEE*LGPFWH Trigger: GTGCCAAAAAGGACCAAGCAATTCTTCAAGTTGATG...TACCAGAACCCAGAGAGCTAAACTCTGGCCTTGTTGCCCTCTGGCCTCCGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
||
| CDS-3UTR CAA 90 bp | TTCCTCGATCCTTGGAGAACATGGAGGCCCCATCCAGTTTTCCTGAGGAACAGCTTCAGTGGCCTCTTCTaGTTCTGGAGAATGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLDPWRTWRPHPVFLRNSFSGLF*FWRMFW Trigger: CCAGAACATTCTCCAGAACAAGAAGAGGCCACTGAA...GCTGTTCCTCAGGAAAACTGGATGGGGCCTCCATGTTCTCCAAGGATCGAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 |
||
| CDS-3UTR CAA 90 bp | GAGAAGAGAGGAGACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTTACATTTCATCGTTTTaGGCTGTGCAGGAGGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EKRGDKKHPARYGAWMSSYISSF*AVQEGL Trigger: CAGGCCCTCCTGCACAGCCAAAAACGATGAAATGTA...ACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTCTCCTCTCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS-3UTR CAA 90 bp | GACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTAGCAGGTCAGAGCTGCTTCATCTGCCTTaGCCTTTCTTCCCATTCACA | + |
|
Preference number: 5 (lower is better) Translates to: DKKHPARYGAWMSSSRSELLHLP*PFFPFT Trigger: TGTGAATGGGAAGAAAGGCAAAGGCAGATGAAGCAG...CTCTGACCTGCTACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS-3UTR CAA 90 bp | GAGAAGAGAGGAGACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTTTCAGTGGCCTCTTCTaGTTCTGGAGAATGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EKRGDKKHPARYGAWMSSFSGLF*FWRMFW Trigger: CCAGAACATTCTCCAGAACAAGAAGAGGCCACTGAA...ACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTCTCCTCTCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGAGACCATGATGAGGCCATCTGTAGGAGTAGCAGAAGCAAGAGAAAGCTCTTCAGTGGCCTCTTCTaGTTCTGGAGAATGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGDHDEAICRSSRSKRKLFSGLF*FWRMFW Trigger: CCAGAACATTCTCCAGAACAAGAAGAGGCCACTGAA...GAGCTTTCTCTTGCTTCTGCTACTCCTACAGATGGCCTCATCATGGTCTCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 |
||
| CDS-3UTR CAA 90 bp | GAGAAGAGAGGAGACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTTCTTCTTCTTCATGCTaGGGTCATCAGCACTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: EKRGDKKHPARYGAWMSSSSSSC*GHQHFQ Trigger: CTGAAAGTGCTGATGACCCAAGCATGAAGAAGAAGA...ACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTCTCCTCTCTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGAGACCATGATGAGGCCATCTGTAGGAGTAGCAGAAGCAAGAGAAAGCTCCTGCTTCATCTGCCTTaGCCTTTCTTCCCATTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SGDHDEAICRSSRSKRKLLLHLP*PFFPFT Trigger: TGTGAATGGGAAGAAAGGCAAAGGCAGATGAAGCAG...GAGCTTTCTCTTGCTTCTGCTACTCCTACAGATGGCCTCATCATGGTCTCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 |
||
| CDS-3UTR CAA 90 bp | GAGAAGAGAGGAGACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTCATCAACTTGAAGAATaGCTTGGTCCTTTTTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: EKRGDKKHPARYGAWMSSHQLEE*LGPFWH Trigger: GTGCCAAAAAGGACCAAGCAATTCTTCAAGTTGATG...ACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTCTCCTCTCTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS-3UTR CAA 90 bp | GACAAGAAACACCCAGCCAGGTATGGAGCATGGATGAGCAGTAGCAGGTCAGAGATGGTTTCCATCAACTaGAAGAATTGCTTGGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: DKKHPARYGAWMSSSRSEMVSIN*KNCLVL Trigger: AAGGACCAAGCAATTCTTCAAGTTGATGGAAACCAT...CTCTGACCTGCTACTGCTCATCCATGCTCCATACCTGGCTGGGTGTTTCTTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGAGACCATGATGAGGCCATCTGTAGGAGTAGCAGAAGCAAGAGAAAGCTCCATCAACTTGAAGAATaGCTTGGTCCTTTTTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SGDHDEAICRSSRSKRKLHQLEE*LGPFWH Trigger: GTGCCAAAAAGGACCAAGCAATTCTTCAAGTTGATG...GAGCTTTCTCTTGCTTCTGCTACTCCTACAGATGGCCTCATCATGGTCTCCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 |
||
| CDS-3UTR CAA 90 bp | CACAGCTCAATCCAATTCTGTCAGGCGCATTACTGTGACCCAGAGGATCATGGGATGGTTTCCATCAACTaGAAGAATTGCTTGGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HSSIQFCQAHYCDPEDHGMVSIN*KNCLVL Trigger: AAGGACCAAGCAATTCTTCAAGTTGATGGAAACCAT...CCCATGATCCTCTGGGTCACAGTAATGCGCCTGACAGAATTGGATTGAGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
||
| CDS-3UTR CAA 90 bp | CAAAGAGCCCAGATTCAAAAGCTGGAGTTGGTCTTGAACATGAAGCATGCCCTTCTGCTTCATCTGCCTTaGCCTTTCTTCCCATTCACA | + |
|
Preference number: 5 (lower is better) Translates to: QRAQIQKLELVLNMKHALLLHLP*PFFPFT Trigger: TGTGAATGGGAAGAAAGGCAAAGGCAGATGAAGCAG...AAGGGCATGCTTCATGTTCAAGACCAACTCCAGCTTTTGAATCTGGGCTCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
||
| CDS TCA 90 bp | AAGGATCCTGATGTAGAACTTGAGCAGTCCAGGTCCCCATTTTCTTaGAATGAGCACAAGCTTTGTTGTAAGTCTGCAAGTGCCTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KDPDVELEQSRSPFS*NEHKLCCKSASASS Trigger: GCTTGAGGCACTTGCAGACTTACAACAAAGCTTGTGCTCATTTCAAGAAAATGGGGACCTGGACTGCTCAAGTTCTACATCAGGATCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS GCA 90 bp | AATGAGCACAAGCTTTGTTGTAAGTCTGCAAGTGCCTCAAGCTGCTaGTTCATCTGCCTTTGCCTTTCTTCCCATTCACAAGCTTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: NEHKLCCKSASASSC*FICLCLSSHSQALL Trigger: GAGTAAAGCTTGTGAATGGGAAGAAAGGCAAAGGCAGATGAAGCAGCAGCTTGAGGCACTTGCAGACTTACAACAAAGCTTGTGCTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS-3UTR CAA 90 bp | AGGCCAGAGTTTAGCTCTCTGGGTTCTGGTATTAAACTGAGGGCTATGATTATTTACATTTCATCGTTTTaGGCTGTGCAGGAGGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RPEFSSLGSGIKLRAMIIYISSF*AVQEGL Trigger: CAGGCCCTCCTGCACAGCCAAAAACGATGAAATGTA...AATAATCATAGCCCTCAGTTTAATACCAGAACCCAGAGAGCTAAACTCTGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
||
| CDS GCA 90 bp | AAGTCCTGCTTCCTGGCATTTCTTAAGAAAAGGAGATTTGACAGCTaGATCTGTGTGACCATGAGGCTCTTCTGTCATATGTCTTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KSCFLAFLKKRRFDS*ICVTMRLFCHMSFG Trigger: GCCAAAAGACATATGACAGAAGAGCCTCATGGTCACACAGATGCAGCTGTCAAATCTCCTTTTCTTAAGAAATGCCAGGAAGCAGGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000161031.2 |
||
| CDS GCA 90 bp | AAGCTTTGTTGTAAGTCTGCAAGTGCCTCAAGCTGCTGCTTCATCTaGCTTTGCCTTTCTTCCCATTCACAAGCTTTACTCTTGATTACT | + |
|
Preference number: 5 (lower is better) Translates to: KLCCKSASASSCCFI*LCLSSHSQALLLIT Trigger: AGTAATCAAGAGTAAAGCTTGTGAATGGGAAGAAAGGCAAAGGCAGATGAAGCAGCAGCTTGAGGCACTTGCAGACTTACAACAAAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS CCA 90 bp | TTTTTCCTCTCTTCTTCTTCATGCTTGGGTCATCAGCACTTTCAGTaGCCTCTTCTTGTTCTGGAGAATGTTCTGGGCAAAATAATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FFLSSSSCLGHQHFQ*PLLVLENVLGKIIC Trigger: ACAAATTATTTTGCCCAGAACATTCTCCAGAACAAGAAGAGGCCACTGAAAGTGCTGATGACCCAAGCATGAAGAAGAAGAGAGGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS-3UTR CAA 90 bp | ATGCTTGTCTACAGCAATACTGTAGACAGCAATACTGTGTCAACTAGTTCTCAATCTTCTTCTTCATGCTaGGGTCATCAGCACTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: MLVYSNTVDSNTVSTSSQSSSSC*GHQHFQ Trigger: CTGAAAGTGCTGATGACCCAAGCATGAAGAAGAAGA...TTGAGAACTAGTTGACACAGTATTGCTGTCTACAGTATTGCTGTAGACAAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095157.11 |
||
| CDS CCA 72 bp | CTGTCTCCTGAGCCTGCTTGCACTTCAGGAGACTCCTaGGATCTGACCTGGTGGTCCTCAGGAGGTAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSPEPACTSGDS*DLTWWSSGGSK Trigger: CTTGCTACCTCCTGAGGACCACCAGGTCAGATCCCAGGAGTCTCCTGAAGTGCAAGCAGGCTCAGGAGACAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS CCA 72 bp | CCTGCTTGCACTTCAGGAGACTCCTGGGATCTGACCTaGTGGTCCTCAGGAGGTAGCAAGGATCCTGATGTA | + |
|
Preference number: 6 (lower is better) Translates to: PACTSGDSWDLT*WSSGGSKDPDV Trigger: TACATCAGGATCCTTGCTACCTCCTGAGGACCACCAGGTCAGATCCCAGGAGTCTCCTGAAGTGCAAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS CCA 72 bp | GCTTGCACTTCAGGAGACTCCTGGGATCTGACCTGGTaGTCCTCAGGAGGTAGCAAGGATCCTGATGTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ACTSGDSWDLTW*SSGGSKDPDVE Trigger: TTCTACATCAGGATCCTTGCTACCTCCTGAGGACCACCAGGTCAGATCCCAGGAGTCTCCTGAAGTGCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS GCA 72 bp | CACAAGCTTTGTTGTAAGTCTGCAAGTGCCTCAAGCTaGTGCTTCATCTGCCTTTGCCTTTCTTCCCATTCA | + |
|
Preference number: 6 (lower is better) Translates to: HKLCCKSASASS*CFICLCLSSHS Trigger: TGAATGGGAAGAAAGGCAAAGGCAGATGAAGCAGCAGCTTGAGGCACTTGCAGACTTACAACAAAGCTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS GCA 72 bp | AAGCTTTGTTGTAAGTCTGCAAGTGCCTCAAGCTGCTaGTTCATCTGCCTTTGCCTTTCTTCCCATTCACAA | + |
|
Preference number: 6 (lower is better) Translates to: KLCCKSASASSC*FICLCLSSHSQ Trigger: TTGTGAATGGGAAGAAAGGCAAAGGCAGATGAAGCAGCAGCTTGAGGCACTTGCAGACTTACAACAAAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS CAA 72 bp | TCATATGTCTTTTGGCGTTACTACATTTCATCGTTTTaGGCTGTGCAGGAGGGCCTGATGAGAGGCGTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SYVFWRYYISSF*AVQEGLMRGVC Trigger: ACAAACGCCTCTCATCAGGCCCTCCTGCACAGCCAAAAACGATGAAATGTAGTAACGCCAAAAGACATATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 ENSMUST00000161031.2 |
||
| CDS TCA 72 bp | TCCGACTCTGAGGCAGTCTCATCCACAAGTCTTCCATaGACTGAATCCATATTTTCTAGTATGTGTTCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SDSEAVSSTSLP*TESIFSSMCSN Trigger: ATTTGAACACATACTAGAAAATATGGATTCAGTTCATGGAAGACTTGTGGATGAGACTGCCTCAGAGTCGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095157.11 ENSMUST00000161031.2 |
||
| CDS GCA 72 bp | TTTGTAAGTTCCATGGTTTCCATCAACTTGAAGAATTaGTTGGTCCTTTTTGGCACAGACATAGTGGTAACT | + |
|
Preference number: 6 (lower is better) Translates to: FVSSMVSINLKN*LVLFGTDIVVT Trigger: AGTTACCACTATGTCTGTGCCAAAAAGGACCAAGCAATTCTTCAAGTTGATGGAAACCATGGAACTTACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095157.11 ENSMUST00000160425.8 ENSMUST00000161031.2 |
||