Pregenerated sensors for PHF10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023883Ensembl transcript IDs: ENSMUST00000024657.12, ENSMUST00000168938.3
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACTATGTCATTCATTCTATGATCCTCCTACATCCCCTTGCACCATaGCAGCTGCTCACCTCTCATCCTACTTCTCAAGGGGAGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: HYVIHSMILLHPLAP*QLLTSHPTSQGERQ Trigger: CTGCCTCTCCCCTTGAGAAGTAGGATGAGAGGTGAGCAGCTGTCATGGTGCAAGGGGATGTAGGAGGATCATAGAATGAATGACATAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR TCA 90 bp | ATCACACAGCAGCCTACTGAAGCTGTCCTCGGAATGAGTCCTTGCTaGGTGAGCCATCGATTGTGTTGCTACACCACAAAAGCATGTTCC | + |
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Preference number: 1 (lower is better) Translates to: ITQQPTEAVLGMSPC*VSHRLCCYTTKACS Trigger: GGAACATGCTTTTGTGGTGTAGCAACACAATCGATGGCTCACTCAGCAAGGACTCATTCCGAGGACAGCTTCAGTAGGCTGCTGTGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR TCA 90 bp | TGTTGCTACACCACAAAAGCATGTTCCAGTGAGGCTGACAGGCAGTaGCTCACAGCTCACTTTGTTTGTTCTTTCCCTGCAATGCGCCTT | + |
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Preference number: 1 (lower is better) Translates to: CCYTTKACSSEADRQ*LTAHFVCSFPAMRL Trigger: AAGGCGCATTGCAGGGAAAGAACAAACAAAGTGAGCTGTGAGTCACTGCCTGTCAGCCTCACTGGAACATGCTTTTGTGGTGTAGCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR GCA 90 bp | TATTCTCTATTTATAATGCATGATGAAACAGGCTCCTTGTTTAAATaGCTCCTCAGCCCGACAGCTGTCACTCCCACTGGCACCTCTAAG | + |
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Preference number: 1 (lower is better) Translates to: YSLFIMHDETGSLFK*LLSPTAVTPTGTSK Trigger: CTTAGAGGTGCCAGTGGGAGTGACAGCTGTCGGGCTGAGGAGGCATTTAAACAAGGAGCCTGTTTCATCATGCATTATAAATAGAGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR GCA 90 bp | ACAGGCAGTGACTCACAGCTCACTTTGTTTGTTCTTTCCCTGCAATaGGCCTTTGTTGCAATGCTAACTAACACACAGGTGTTTAACAAC | + |
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Preference number: 1 (lower is better) Translates to: TGSDSQLTLFVLSLQ*AFVAMLTNTQVFNN Trigger: GTTGTTAAACACCTGTGTGTTAGTTAGCATTGCAACAAAGGCGCATTGCAGGGAAAGAACAAACAAAGTGAGCTGTGAGTCACTGCCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR TCA 90 bp | ACAGAATGGTATACCAGCTATCTGCCAAAGGTTATACAAAAACAATaGTGTAAGTTAACAGCTATTCCTATTTTCTATTCGAAACCTGGC | + |
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Preference number: 1 (lower is better) Translates to: TEWYTSYLPKVIQKQ*CKLTAIPIFYSKPG Trigger: GCCAGGTTTCGAATAGAAAATAGGAATAGCTGTTAACTTACATCATTGTTTTTGTATAACCTTTGGCAGATAGCTGGTATACCATTCTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR-3UTR TCA 90 bp | TTAAATGCCTCCTCAGCCCGACAGCTGTCACTCCCACTGGCACCTCTAAGACAGTCAGAGTTAACGATATaGGGGAGAGGCTGGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LNASSARQLSLPLAPLRQSELTI*GRGWPG Trigger: TCCTGGCCAGCCTCTCCCTCATATCGTTAACTCTGA...CTGTCTTAGAGGTGCCAGTGGGAGTGACAGCTGTCGGGCTGAGGAGGCATTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGAGAAGTGGGAGAGAGGCCACTGTGGCCCTTTGTAGAGATGCTACAGTTGACAGTGACACATGTTaGCTCCTGCAGGCTGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: SRRSGREATVALCRDATVDSDTC*LLQAAS Trigger: AGAGGCAGCCTGCAGGAGCCAACATGTGTCACTGTC...AACTGTAGCATCTCTACAAAGGGCCACAGTGGCCTCTCTCCCACTTCTCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR-3UTR GCA 90 bp | TTAAATGCCTCCTCAGCCCGACAGCTGTCACTCCCACTGGCACCTCTAAGACAGTTGCACCATGACAGCTaGTCACCTCTCATCCTACTT | + |
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Preference number: 2 (lower is better) Translates to: LNASSARQLSLPLAPLRQLHHDS*SPLILL Trigger: AAGTAGGATGAGAGGTGAGCAGCTGTCATGGTGCAA...CTGTCTTAGAGGTGCCAGTGGGAGTGACAGCTGTCGGGCTGAGGAGGCATTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGAGAAGTGGGAGAGAGGCCACTGTGGCCCTTTGTAGAGATGCTACAGTTTACCATGACCAAAAGTaGCAAGAAAGCCACCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: SRRSGREATVALCRDATVYHDQK*QESHQR Trigger: TCTCTGGTGGCTTTCTTGTCACTTTTGGTCATGGTA...AACTGTAGCATCTCTACAAAGGGCCACAGTGGCCTCTCTCCCACTTCTCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGAGAAGTGGGAGAGAGGCCACTGTGGCCCTTTGTAGAGATGCTACAGTTGGAGCCGTCTTTTCTTaGAGTGGCCATTTTGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: SRRSGREATVALCRDATVGAVFS*SGHFVF Trigger: AAAGACAAAATGGCCACTCCAAGAAAAGACGGCTCC...AACTGTAGCATCTCTACAAAGGGCCACAGTGGCCTCTCTCCCACTTCTCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGAGAAGTGGGAGAGAGGCCACTGTGGCCCTTTGTAGAGATGCTACAGTTAATACAGCCAAGACCTaGAGTGCATGCTGTACTTTG | + |
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Preference number: 2 (lower is better) Translates to: SRRSGREATVALCRDATVNTAKT*SACCTL Trigger: CAAAGTACAGCATGCACTCCAGGTCTTGGCTGTATT...AACTGTAGCATCTCTACAAAGGGCCACAGTGGCCTCTCTCCCACTTCTCCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGTGGGAGAGAGGCCACTGTGGCCCTTTGTAGAGATGCTACAGTTCAACACATCCACGTCACAAAGCTaGGCACTATGTCATTCATTC | + |
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Preference number: 2 (lower is better) Translates to: EVGERPLWPFVEMLQFNTSTSQS*ALCHSF Trigger: GAATGAATGACATAGTGCTCAGCTTTGTGACGTGGA...TGTGTTGAACTGTAGCATCTCTACAAAGGGCCACAGTGGCCTCTCTCCCACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR-3UTR GCA 90 bp | CATCGATTGTGTTGCTACACCACAAAAGCATGTTCCAGTGAGGCTGACAGGCAGAGGAGCTGTCCGAAGTaGCTTTATTCTTCCGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: HRLCCYTTKACSSEADRQRSCPK*LYSSAS Trigger: AGAAGCGGAAGAATAAAGGCACTTCGGACAGCTCCT...CTGCCTGTCAGCCTCACTGGAACATGCTTTTGTGGTGTAGCAACACAATCGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR CAA 90 bp | AAGCATGTTCCAGTGAGGCTGACAGGCAGTGACTCACAGCTCACTTaGTTTGTTCTTTCCCTGCAATGCGCCTTTGTTGCAATGCTAACT | + |
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Preference number: 2 (lower is better) Translates to: KHVPVRLTGSDSQLT*FVLSLQCAFVAMLT Trigger: AGTTAGCATTGCAACAAAGGCGCATTGCAGGGAAAGAACAAACAAAGTGAGCTGTGAGTCACTGCCTGTCAGCCTCACTGGAACATGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR-3UTR CCA 90 bp | TTAAATGCCTCCTCAGCCCGACAGCTGTCACTCCCACTGGCACCTCTAAGACAGAAACCTGGCAAAATTTaGCAATTGGATTCAACAATC | + |
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Preference number: 2 (lower is better) Translates to: LNASSARQLSLPLAPLRQKPGKI*QLDSTI Trigger: GATTGTTGAATCCAATTGCCAAATTTTGCCAGGTTT...CTGTCTTAGAGGTGCCAGTGGGAGTGACAGCTGTCGGGCTGAGGAGGCATTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR-3UTR CCA 90 bp | TTAAATGCCTCCTCAGCCCGACAGCTGTCACTCCCACTGGCACCTCTAAGACAGTTTCTATTCGAAACCTaGCAAAATTTGGCAATTGGA | + |
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Preference number: 2 (lower is better) Translates to: LNASSARQLSLPLAPLRQFLFET*QNLAIG Trigger: TCCAATTGCCAAATTTTGCCAGGTTTCGAATAGAAA...CTGTCTTAGAGGTGCCAGTGGGAGTGACAGCTGTCGGGCTGAGGAGGCATTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR-3UTR TCA 90 bp | TTACAACCTTCCTTTAGTACATCTCCATATAGGAACCAGGTGCATATTCTAATATTCAGACACATTGCCTaGGGAGCTGTCCGAAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: LQPSFSTSPYRNQVHILIFRHIA*GAVRSA Trigger: GGCACTTCGGACAGCTCCTCAGGCAATGTGTCTGAA...TATTAGAATATGCACCTGGTTCCTATATGGAGATGTACTAAAGGAAGGTTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR-3UTR TCA 90 bp | TTACAACCTTCCTTTAGTACATCTCCATATAGGAACCAGGTGCATATTCTAATAATGTCATTCATTCTATaGTCCTCCTACATCCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LQPSFSTSPYRNQVHILIMSFIL*SSYIPL Trigger: CAAGGGGATGTAGGAGGATCATAGAATGAATGACAT...TATTAGAATATGCACCTGGTTCCTATATGGAGATGTACTAAAGGAAGGTTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR-3UTR CCA 90 bp | TTACAACCTTCCTTTAGTACATCTCCATATAGGAACCAGGTGCATATTCTAATAGTCCTTGTTACAGAATaGTATACCAGCTATCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: LQPSFSTSPYRNQVHILIVLVTE*YTSYLP Trigger: TGGCAGATAGCTGGTATACCATTCTGTAACAAGGAC...TATTAGAATATGCACCTGGTTCCTATATGGAGATGTACTAAAGGAAGGTTGTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR-3UTR CAA 90 bp | TTAAATGCCTCCTCAGCCCGACAGCTGTCACTCCCACTGGCACCTCTAAGACAGTGGAGCCGTCTTTTCTaGGAGTGGCCATTTTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: LNASSARQLSLPLAPLRQWSRLF*EWPFCL Trigger: AAGACAAAATGGCCACTCCAAGAAAAGACGGCTCCA...CTGTCTTAGAGGTGCCAGTGGGAGTGACAGCTGTCGGGCTGAGGAGGCATTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR TCA 72 bp | CAGCCTACTGAAGCTGTCCTCGGAATGAGTCCTTGCTaGGTGAGCCATCGATTGTGTTGCTACACCACAAAA | + |
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Preference number: 3 (lower is better) Translates to: QPTEAVLGMSPC*VSHRLCCYTTK Trigger: TTTTGTGGTGTAGCAACACAATCGATGGCTCACTCAGCAAGGACTCATTCCGAGGACAGCTTCAGTAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR GCA 72 bp | CTATGTCATTCATTCTATGATCCTCCTACATCCCCTTaGACCATGACAGCTGCTCACCTCTCATCCTACTTC | + |
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Preference number: 3 (lower is better) Translates to: LCHSFYDPPTSP*TMTAAHLSSYF Trigger: GAAGTAGGATGAGAGGTGAGCAGCTGTCATGGTGCAAGGGGATGTAGGAGGATCATAGAATGAATGACATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR GCA 72 bp | GACTCACAGCTCACTTTGTTTGTTCTTTCCCTGCAATaGGCCTTTGTTGCAATGCTAACTAACACACAGGTG | + |
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Preference number: 3 (lower is better) Translates to: DSQLTLFVLSLQ*AFVAMLTNTQV Trigger: CACCTGTGTGTTAGTTAGCATTGCAACAAAGGCGCATTGCAGGGAAAGAACAAACAAAGTGAGCTGTGAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR TCA 72 bp | AAATATGGAGTTAAACAAACATATAGAATGTCCCATTaGCTACTCTCCACCTCCTCTCGTTTATACCCTGCT | + |
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Preference number: 3 (lower is better) Translates to: KYGVKQTYRMSH*LLSTSSRLYPA Trigger: AGCAGGGTATAAACGAGAGGAGGTGGAGAGTAGTCAATGGGACATTCTATATGTTTGTTTAACTCCATATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| 3UTR CCA 72 bp | GCTATTCCTATTTTCTATTCGAAACCTGGCAAAATTTaGCAATTGGATTCAACAATCCTTAGAATAAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: AIPIFYSKPGKI*QLDSTILRISL Trigger: CAGGCTTATTCTAAGGATTGTTGAATCCAATTGCCAAATTTTGCCAGGTTTCGAATAGAAAATAGGAATAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| CDS-3UTR TCA 90 bp | CAGAGAAAGAAAGCAGTGGACAGGTGCACAGGACAGGATGGCGGAGCACAGCAACACCCAGATATTCACTaGCTTGCTCCTGAAGCATAT | + |
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Preference number: 4 (lower is better) Translates to: QRKKAVDRCTGQDGGAQQHPDIH*LAPEAY Trigger: ATATGCTTCAGGAGCAAGTCAGTGAATATCTGGGTG...TTGCTGTGCTCCGCCATCCTGTCCTGTGCACCTGTCCACTGCTTTCTTTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| CDS-3UTR GCA 90 bp | AGCAGGAGAAGTGGGAGAGAGGCCACTGTGGCCCTTTGTAGAGATGCTACAGTTGCTGTTGAACTCAGCTaGCTTCTTGGCTGCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SRRSGREATVALCRDATVAVELS*LLGCFL Trigger: AAGAAAGCAGCCAAGAAGGCAGCTGAGTTCAACAGC...AACTGTAGCATCTCTACAAAGGGCCACAGTGGCCTCTCTCCCACTTCTCCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| CDS-3UTR TCA 90 bp | CAGAGAAAGAAAGCAGTGGACAGGTGCACAGGACAGGATGGCGGAGCACAGCAACTGAAGCTAAGATCTTaGCTTGAAGTCTCACAACTT | + |
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Preference number: 4 (lower is better) Translates to: QRKKAVDRCTGQDGGAQQLKLRS*LEVSQL Trigger: AAGTTGTGAGACTTCAAGTCAAGATCTTAGCTTCAG...TTGCTGTGCTCCGCCATCCTGTCCTGTGCACCTGTCCACTGCTTTCTTTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| CDS-3UTR TCA 90 bp | GAAAGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCGTTGGGGGAGCTCGCTaGCAACAGTCACAAATCCAG | + |
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Preference number: 4 (lower is better) Translates to: ESVVNKLAPNIPNMRVKAVGGAR*QQSQIQ Trigger: CTGGATTTGTGACTGTTGTCAGCGAGCTCCCCCAAC...GGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| CDS-3UTR CCA 90 bp | GAAAGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCCACTTTCCTGGGTGTTaGGGGAGCTCGCTGACAACA | + |
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Preference number: 4 (lower is better) Translates to: ESVVNKLAPNIPNMRVKAHFPGC*GSSLTT Trigger: TGTTGTCAGCGAGCTCCCCCAACACCCAGGAAAGTG...GGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| CDS-3UTR TCA 90 bp | AGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCTATTTCAGACACATTGCCTaGGGAGCTGTCCGAAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SVVNKLAPNIPNMRVKAYFRHIA*GAVRSA Trigger: GGCACTTCGGACAGCTCCTCAGGCAATGTGTCTGAA...ATAGGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| CDS-3UTR GCA 90 bp | GAAAGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCTGTTTTTCCCCCTTCTaGCCACTTTCCTGGGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: ESVVNKLAPNIPNMRVKACFSPF*PLSWVL Trigger: CAACACCCAGGAAAGTGGGCAGAAGGGGGAAAAACA...GGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| 3UTR CAA 72 bp | CAGGTTAATGTAACCCAAGCAATACCGTCCTACAAGTaGAGGGTAAGCACCAGTCATCCTATTACATCACAT | + |
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Preference number: 4 (lower is better) Translates to: QVNVTQAIPSYK*RVSTSHPITSH Trigger: ATGTGATGTAATAGGATGACTGGTGCTTACCCTCAACTTGTAGGACGGTATTGCTTGGGTTACATTAACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| CDS-3UTR GCA 90 bp | GAAAGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCAGGAGCTGTCCGAAGTaGCTTTATTCTTCCGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ESVVNKLAPNIPNMRVKARSCPK*LYSSAS Trigger: AGAAGCGGAAGAATAAAGGCACTTCGGACAGCTCCT...GGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| 3UTR CAA 72 bp | TATTCTCTATTTATAATGCATGATGAAACAGGCTCCTaGTTTAAATGCCTCCTCAGCCCGACAGCTGTCACT | + |
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Preference number: 4 (lower is better) Translates to: YSLFIMHDETGS*FKCLLSPTAVT Trigger: AGTGACAGCTGTCGGGCTGAGGAGGCATTTAAACAAGGAGCCTGTTTCATCATGCATTATAAATAGAGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| CDS-3UTR TCA 90 bp | GAAAGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCCACCCAGATATTCACTaGCTTGCTCCTGAAGCATAT | + |
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Preference number: 4 (lower is better) Translates to: ESVVNKLAPNIPNMRVKAHPDIH*LAPEAY Trigger: ATATGCTTCAGGAGCAAGTCAGTGAATATCTGGGTG...GGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| CDS-3UTR TCA 90 bp | AGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCTATGGTTTAAGTTGCTGTTaGACTCAGCTGCCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SVVNKLAPNIPNMRVKAYGLSCC*TQLPSW Trigger: CCAAGAAGGCAGCTGAGTTCAACAGCAACTTAAACC...ATAGGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| CDS-3UTR GCA 90 bp | AGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCTATGCTGTTGAACTCAGCTaGCTTCTTGGCTGCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SVVNKLAPNIPNMRVKAYAVELS*LLGCFL Trigger: AAGAAAGCAGCCAAGAAGGCAGCTGAGTTCAACAGC...ATAGGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| CDS-3UTR TCA 90 bp | AGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCTATATAGAGCATTTGGAATaGCCTTTGGCTTGTACCCAG | + |
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Preference number: 4 (lower is better) Translates to: SVVNKLAPNIPNMRVKAYIEHLE*PLACTQ Trigger: CTGGGTACAAGCCAAAGGTCATTCCAAATGCTCTAT...ATAGGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| CDS-3UTR GCA 90 bp | AGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCTATAGCTGCCTTCTTGGCTaGTTTCTTAATGTACTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SVVNKLAPNIPNMRVKAYSCLLG*FLNVLR Trigger: CCTGAGTACATTAAGAAAGCAGCCAAGAAGGCAGCT...ATAGGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| CDS-3UTR CCA 90 bp | AGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCTATGGAGCCGTCTTTTCTTaGAGTGGCCATTTTGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SVVNKLAPNIPNMRVKAYGAVFS*SGHFVF Trigger: AAAGACAAAATGGCCACTCCAAGAAAAGACGGCTCC...ATAGGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| CDS-3UTR GCA 90 bp | TGTTTTAAAACCTCCTACTTGTCTGGTTATTACTTAAAGGGACAAAGACCCATTAGCTGCCTTCTTGGCTaGTTTCTTAATGTACTCAGG | + |
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Preference number: 4 (lower is better) Translates to: CFKTSYLSGYYLKGQRPISCLLG*FLNVLR Trigger: CCTGAGTACATTAAGAAAGCAGCCAAGAAGGCAGCT...AATGGGTCTTTGTCCCTTTAAGTAATAACCAGACAAGTAGGAGGTTTTAAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| CDS-3UTR CCA 90 bp | GAAAGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCTTCCATACACTGCCATaGGTAGGTCTTAATCATAGA | + |
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Preference number: 4 (lower is better) Translates to: ESVVNKLAPNIPNMRVKAFHTLP*VGLNHR Trigger: TCTATGATTAAGACCTACCCATGGCAGTGTATGGAA...GGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| CDS-3UTR TCA 90 bp | AGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCTATCTGAAGCTAAGATCTTaGCTTGAAGTCTCACAACTT | + |
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Preference number: 4 (lower is better) Translates to: SVVNKLAPNIPNMRVKAYLKLRS*LEVSQL Trigger: AAGTTGTGAGACTTCAAGTCAAGATCTTAGCTTCAG...ATAGGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| CDS-3UTR CCA 90 bp | AGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCTATATTTCTTCTTCATGGTaGGGCTGTCCACATATAATG | + |
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Preference number: 4 (lower is better) Translates to: SVVNKLAPNIPNMRVKAYISSSW*GCPHIM Trigger: CATTATATGTGGACAGCCCCACCATGAAGAAGAAAT...ATAGGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| CDS-3UTR CCA 90 bp | AGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCTATATCATTTCTTCTTCATaGTGGGGCTGTCCACATATA | + |
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Preference number: 4 (lower is better) Translates to: SVVNKLAPNIPNMRVKAYIISSS*WGCPHI Trigger: TATATGTGGACAGCCCCACCATGAAGAAGAAATGAT...ATAGGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| CDS-3UTR CAA 90 bp | AGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCTATCCACTTTCCTGGGTGTaGGGGGAGCTCGCTGACAAC | + |
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Preference number: 5 (lower is better) Translates to: SVVNKLAPNIPNMRVKAYPLSWV*GELADN Trigger: GTTGTCAGCGAGCTCCCCCAACACCCAGGAAAGTGG...ATAGGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| CDS-3UTR CAA 90 bp | AGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCTATCGCTCCCGGTTTAAGTaGCTGTTGAACTCAGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: SVVNKLAPNIPNMRVKAYRSRFK*LLNSAA Trigger: GGCAGCTGAGTTCAACAGCAACTTAAACCGGGAGCG...ATAGGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| CDS-3UTR CAA 90 bp | TTACAACCTTCCTTTAGTACATCTCCATATAGGAACCAGGTGCATATTCTAATACGCTCCCGGTTTAAGTaGCTGTTGAACTCAGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LQPSFSTSPYRNQVHILIRSRFK*LLNSAA Trigger: GGCAGCTGAGTTCAACAGCAACTTAAACCGGGAGCG...TATTAGAATATGCACCTGGTTCCTATATGGAGATGTACTAAAGGAAGGTTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168938.3 |
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| CDS CCA 90 bp | GGGCTGTCCACATATAATGCATGTCTTACATTCCATACACTGCCATaGGTAGGTCTTAATCATAGAAACAAGCTCCATGGTCATATCCAA | + |
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Preference number: 5 (lower is better) Translates to: GLSTYNACLTFHTLP*VGLNHRNKLHGHIQ Trigger: TTGGATATGACCATGGAGCTTGTTTCTATGATTAAGACCTACCCATGGCAGTGTATGGAATGTAAGACATGCATTATATGTGGACAGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| CDS-3UTR CAA 90 bp | AGTGTTGTAAATAAATTGGCACCAAATATCCCAAACATGAGGGTCAAAGCCTATTGGAGCCGTCTTTTCTaGGAGTGGCCATTTTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: SVVNKLAPNIPNMRVKAYWSRLF*EWPFCL Trigger: AAGACAAAATGGCCACTCCAAGAAAAGACGGCTCCA...ATAGGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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| CDS CCA 72 bp | ACATATAATGCATGTCTTACATTCCATACACTGCCATaGGTAGGTCTTAATCATAGAAACAAGCTCCATGGT | + |
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Preference number: 6 (lower is better) Translates to: TYNACLTFHTLP*VGLNHRNKLHG Trigger: ACCATGGAGCTTGTTTCTATGATTAAGACCTACCCATGGCAGTGTATGGAATGTAAGACATGCATTATATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024657.12 |
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