Pregenerated sensors for PHF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024193Ensembl transcript IDs: ENSMUST00000073724.7, ENSMUST00000236269.2, ENSMUST00000237189.2, ENSMUST00000237412.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCATACCCAGGATGCGCCCTCTCCTTCTCCAGGGGCCGGGGCCCTaGGAACGTGACAGTCCTGGTGATAAGCATGGCGACACTTCTCAC | + |
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Preference number: 1 (lower is better) Translates to: GIPRMRPLLLQGPGP*ERDSPGDKHGDTSH Trigger: GTGAGAAGTGTCGCCATGCTTATCACCAGGACTGTCACGTTCCCAGGGCCCCGGCCCCTGGAGAAGGAGAGGGCGCATCCTGGGTATGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| 3UTR CCA 90 bp | TTCTTCAGTGCGCCTCCCCTCTTAGTGGCGATTGCAAAGACACACTaGCGGCATACCCAGGATGCGCCCTCTCCTTCTCCAGGGGCCGGG | + |
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Preference number: 1 (lower is better) Translates to: FFSAPPLLVAIAKTH*RHTQDAPSPSPGAG Trigger: CCCGGCCCCTGGAGAAGGAGAGGGCGCATCCTGGGTATGCCGCCAGTGTGTCTTTGCAATCGCCACTAAGAGGGGAGGCGCACTGAAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| 3UTR GCA 90 bp | GGCATAGGGACCTTTCTTCAGTGCGCCTCCCCTCTTAGTGGCGATTaGAAAGACACACTGGCGGCATACCCAGGATGCGCCCTCTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: GIGTFLQCASPLSGD*KDTLAAYPGCALSF Trigger: GAAGGAGAGGGCGCATCCTGGGTATGCCGCCAGTGTGTCTTTGCAATCGCCACTAAGAGGGGAGGCGCACTGAAGAAAGGTCCCTATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| 3UTR GCA 90 bp | CATCCCAGTCCAGCCCTTTTAATCCGTATGGCAGGGAGAGCTTCATaGCCAGCATGGCCCGGGCATAGGGACCTTTCTTCAGTGCGCCTC | + |
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Preference number: 1 (lower is better) Translates to: HPSPALLIRMAGRAS*PAWPGHRDLSSVRL Trigger: GAGGCGCACTGAAGAAAGGTCCCTATGCCCGGGCCATGCTGGGCATGAAGCTCTCCCTGCCATACGGATTAAAAGGGCTGGACTGGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| 3UTR TCA 90 bp | GAACGTGACAGTCCTGGTGATAAGCATGGCGACACTTCTCACAGCTaGCCAGCCGGTTCCCAGGTACCACGGTCTCAGAGCGACACACAC | + |
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Preference number: 1 (lower is better) Translates to: ERDSPGDKHGDTSHS*PAGSQVPRSQSDTH Trigger: GTGTGTGTCGCTCTGAGACCGTGGTACCTGGGAACCGGCTGGTCAGCTGTGAGAAGTGTCGCCATGCTTATCACCAGGACTGTCACGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGGTGCCAGTGTGTGAATaGGGAGGGGAGCAGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGVPVCE*GGEQKQ Trigger: CTGCTTCTGCTCCCCTCCCCATTCACACACTGGCAC...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| 3UTR-3UTR TCA 90 bp | CGTATGGCAGGGAGAGCTTCATGCCCAGCATGGCCCGGGCATAGGGACCTTTCTGACACTTCTCACAGCTaGCCAGCCGGTTCCCAGGTA | + |
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Preference number: 2 (lower is better) Translates to: RMAGRASCPAWPGHRDLSDTSHS*PAGSQV Trigger: TACCTGGGAACCGGCTGGTCAGCTGTGAGAAGTGTC...AGAAAGGTCCCTATGCCCGGGCCATGCTGGGCATGAAGCTCTCCCTGCCATACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAGCCCTTTTAATCCGTATGGCAGGGAGAGCTTCATGCCCAGCATGGCCCGGCCTCTTAGTGGCGATTaGAAAGACACACTGGCGGCA | + |
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Preference number: 2 (lower is better) Translates to: SSPFNPYGRESFMPSMARPLSGD*KDTLAA Trigger: TGCCGCCAGTGTGTCTTTGCAATCGCCACTAAGAGG...CCGGGCCATGCTGGGCATGAAGCTCTCCCTGCCATACGGATTAAAAGGGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGTCCAGCCCTTTTAATCCGTATGGCAGGGAGAGCTTCATGCCCAGCATGGGAGGGCAGCTGGGCTaGTATCCTTCCATAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: SQSSPFNPYGRESFMPSMGGQLG*YPSIEP Trigger: TGGTTCTATGGAAGGATATCAGCCCAGCTGCCCTCC...CATGCTGGGCATGAAGCTCTCCCTGCCATACGGATTAAAAGGGCTGGACTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| 3UTR-3UTR TCA 90 bp | ATTAGGAGTCATGAAGGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGAAAGTGCCAGTGTGTaGATGGGGAGGGGAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: IRSHEGAEKRTSSLPWIPESASV*MGRGAE Trigger: TTCTGCTCCCCTCCCCATTCACACACTGGCACTTTC...TGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCCTTCATGACTCCTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| 3UTR-3UTR TCA 90 bp | ATTAGGAGTCATGAAGGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCATCAGAGGTCAGGGCATaGAAGTGCCAGTGTGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: IRSHEGAEKRTSSLPWIPSEVRA*KCQCVN Trigger: ATTCACACACTGGCACTTTCATGCCCTGACCTCTGA...TGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCCTTCATGACTCCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| 3UTR-3UTR CCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCCCCTGGATTCCAGCCTaGGCAGGAGGGAGAACCACT | + |
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Preference number: 2 (lower is better) Translates to: LFIFITVIQSGILDHPNPPWIPA*AGGRTT Trigger: AGTGGTTCTCCCTCCTGCCCAGGCTGGAATCCAGGG...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCTGGATTCCAGCCTaGGCAGGAGGGAGAACCACT | + |
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Preference number: 2 (lower is better) Translates to: GLFIFITVIQSGILDHPNPWIPA*AGGRTT Trigger: AGTGGTTCTCCCTCCTGCCCAGGCTGGAATCCAGGG...GTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCCTGGATTCCAGCCTaGGCAGGAGGGAGAACCACT | + |
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Preference number: 2 (lower is better) Translates to: VYLSLLQSYSLESWTTQTPWIPA*AGGRTT Trigger: AGTGGTTCTCCCTCCTGCCCAGGCTGGAATCCAGGG...GGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| 3UTR-3UTR CCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCACCTCTTCACTCCCCTaGATTCCAGCCTGGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LFIFITVIQSGILDHPNPTSSLP*IPAWAG Trigger: TCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGT...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACGTGCCAGTGTGTGAATaGGGAGGGGAGCAGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GLFIFITVIQSGILDHPNVPVCE*GGEQKQ Trigger: CTGCTTCTGCTCCCCTCCCCATTCACACACTGGCAC...GTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCACCTCTTCACTCCCCTaGATTCCAGCCTGGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: VYLSLLQSYSLESWTTQTTSSLP*IPAWAG Trigger: TCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGT...GGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAGAAAGTGCCAGTGTGTaGATGGGGAGGGGAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LGLFIFITVIQSGILDHPESASV*MGRGAE Trigger: TTCTGCTCCCCTCCCCATTCACACACTGGCACTTTC...TGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073724.7 |
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| 3UTR-3UTR TCA 90 bp | GTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCGAAAGTGCCAGTGTGTaGATGGGGAGGGGAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: VYLSLLQSYSLESWTTQTESASV*MGRGAE Trigger: TTCTGCTCCCCTCCCCATTCACACACTGGCACTTTC...GGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCTCAGAGGTCAGGGCATaGAAGTGCCAGTGTGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: VYLSLLQSYSLESWTTQTSEVRA*KCQCVN Trigger: ATTCACACACTGGCACTTTCATGCCCTGACCTCTGA...GGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| 3UTR CCA 72 bp | GCGCCTCCCCTCTTAGTGGCGATTGCAAAGACACACTaGCGGCATACCCAGGATGCGCCCTCTCCTTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: APPLLVAIAKTH*RHTQDAPSPSP Trigger: TGGAGAAGGAGAGGGCGCATCCTGGGTATGCCGCCAGTGTGTCTTTGCAATCGCCACTAAGAGGGGAGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| 3UTR GCA 72 bp | GCCCAGCATGGCCCGGGCATAGGGACCTTTCTTCAGTaGGCCTCCCCTCTTAGTGGCGATTGCAAAGACACA | + |
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Preference number: 3 (lower is better) Translates to: AQHGPGIGTFLQ*ASPLSGDCKDT Trigger: TGTGTCTTTGCAATCGCCACTAAGAGGGGAGGCGCACTGAAGAAAGGTCCCTATGCCCGGGCCATGCTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| 3UTR TCA 72 bp | AGTCCTGGTGATAAGCATGGCGACACTTCTCACAGCTaGCCAGCCGGTTCCCAGGTACCACGGTCTCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: SPGDKHGDTSHS*PAGSQVPRSQS Trigger: GCTCTGAGACCGTGGTACCTGGGAACCGGCTGGTCAGCTGTGAGAAGTGTCGCCATGCTTATCACCAGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| 3UTR GCA 72 bp | ACCTTTCTTCAGTGCGCCTCCCCTCTTAGTGGCGATTaGAAAGACACACTGGCGGCATACCCAGGATGCGCC | + |
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Preference number: 3 (lower is better) Translates to: TFLQCASPLSGD*KDTLAAYPGCA Trigger: GGCGCATCCTGGGTATGCCGCCAGTGTGTCTTTGCAATCGCCACTAAGAGGGGAGGCGCACTGAAGAAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| 3UTR CCA 72 bp | TTAATCCGTATGGCAGGGAGAGCTTCATGCCCAGCATaGCCCGGGCATAGGGACCTTTCTTCAGTGCGCCTC | + |
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Preference number: 3 (lower is better) Translates to: LIRMAGRASCPA*PGHRDLSSVRL Trigger: GAGGCGCACTGAAGAAAGGTCCCTATGCCCGGGCCATGCTGGGCATGAAGCTCTCCCTGCCATACGGATTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| 3UTR GCA 72 bp | CCAGCCCTTTTAATCCGTATGGCAGGGAGAGCTTCATaGCCAGCATGGCCCGGGCATAGGGACCTTTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: PALLIRMAGRAS*PAWPGHRDLSS Trigger: TGAAGAAAGGTCCCTATGCCCGGGCCATGCTGGGCATGAAGCTCTCCCTGCCATACGGATTAAAAGGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| CDS-3UTR CCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGGCCTCATGGAACCACTaGAGGCAGCTCCGGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGASWNH*RQLRHC Trigger: GCAGTGCCGGAGCTGCCTCCAGTGGTTCCATGAGGC...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGCCTGGACCAGTGACCTaGTGGGGGCTCCATCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGPGPVT*WGLHLQ Trigger: CTGGAGATGGAGCCCCCACCAGGTCACTGGTCCAGG...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237189.2 |
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| CDS-3UTR TCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGTCCCTTGGGAGTATCTaGGAGCTCCCCCAGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGSLGSI*ELPQEQ Trigger: CTGCTCCTGGGGGAGCTCTCAGATACTCCCAAGGGA...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR TCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGGGGCTCCATCTCCAGTaGGAAGCTCCACAGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGGLHLQ*EAPQEE Trigger: CTCCTCCTGTGGAGCTTCTCACTGGAGATGGAGCCC...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGCGTAGAGGAGGGGCTTaGTCAGACACTGGGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGRRGGA*SDTGCR Trigger: CCTGCACCCAGTGTCTGAGCAAGCCCCTCCTCTACG...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGCAGAGGTCCCTGCAGTaGTGGCAGAAGGGTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGQRSLQ*WQKGGR Trigger: CCTTCCACCCTTCTGCCAGCACTGCAGGGACCTCTG...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGGCTTCATGCCCAGCATaGCCCGGGCATAGGGACCTT | + |
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Preference number: 4 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGASCPA*PGHRDL Trigger: AAGGTCCCTATGCCCGGGCCATGCTGGGCATGAAGC...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGGTGTGCTGCCGTGGGTaGCCCCAGTTCCTCCACTTT | + |
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Preference number: 4 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGVCCRG*PQFLHF Trigger: AAAGTGGAGGAACTGGGGCCACCCACGGCAGCACAC...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGGTGCTGGCAGAAGGGTaGAAGGAGGCGAACATCCGG | + |
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Preference number: 4 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGVLAEG*KEANIR Trigger: CCGGATGTTCGCCTCCTTCCACCCTTCTGCCAGCAC...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR TCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGGACACTTCTCACAGCTaGCCAGCCGGTTCCCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGDTSHS*PAGSQV Trigger: TACCTGGGAACCGGCTGGTCAGCTGTGAGAAGTGTC...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR TCA 90 bp | GGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGAGGGCTCCATCTCCAGTaGGAAGCTCCACAGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GQRRGPLHSPGFQPGQEGGLHLQ*EAPQEE Trigger: CTCCTCCTGTGGAGCTTCTCACTGGAGATGGAGCCC...TCCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGGGGACCTTTCTTCAGTaGGCCTCCCCTCTTAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGGTFLQ*ASPLSG Trigger: GCCACTAAGAGGGGAGGCGCACTGAAGAAAGGTCCC...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | GGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGACGTAGAGGAGGGGCTTaGTCAGACACTGGGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GQRRGPLHSPGFQPGQEGRRGGA*SDTGCR Trigger: CCTGCACCCAGTGTCTGAGCAAGCCCCTCCTCTACG...TCCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | CGGGGCCCTGGGAACGTGACAGTCCTGGTGATAAGCATGGCGACACTTCTCACACCCAAAGCCGAGGTCTaGGGCCTGAGGTGGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: RGPGNVTVLVISMATLLTPKAEV*GLRWEQ Trigger: CTGCTCCCACCTCAGGCCCCAGACCTCGGCTTTGGG...TGTGAGAAGTGTCGCCATGCTTATCACCAGGACTGTCACGTTCCCAGGGCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| CDS-3UTR CCA 90 bp | GGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGAGTGTGCTGCCGTGGGTaGCCCCAGTTCCTCCACTTT | + |
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Preference number: 4 (lower is better) Translates to: GQRRGPLHSPGFQPGQEGVCCRG*PQFLHF Trigger: AAAGTGGAGGAACTGGGGCCACCCACGGCAGCACAC...TCCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | GGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGAGTGCTGGCAGAAGGGTaGAAGGAGGCGAACATCCGG | + |
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Preference number: 4 (lower is better) Translates to: GQRRGPLHSPGFQPGQEGVLAEG*KEANIR Trigger: CCGGATGTTCGCCTCCTTCCACCCTTCTGCCAGCAC...TCCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR TCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGCAAGGGAGAAGGGGGTaGATGTCTGGAAAAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGQGRRG*MSGKAW Trigger: CCAGGCTTTTCCAGACATTCACCCCCTTCTCCCTTG...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGGCCCATCAGTCCATCTaGCCAGCACATCTTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGAHQSI*PAHLGL Trigger: AAGGCCAAGATGTGCTGGCCAGATGGACTGATGGGC...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGAGAGCAGAAAGGAGCTaGGAAGAGCGCTCTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGRAERS*EERSPL Trigger: CAAGGGAGAGCGCTCTTCCCAGCTCCTTTCTGCTCT...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR TCA 90 bp | GGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGAGGAGGGCAGCTGGGCTaGTATCCTTCCATAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: GQRRGPLHSPGFQPGQEGGGQLG*YPSIEP Trigger: TGGTTCTATGGAAGGATATCAGCCCAGCTGCCCTCC...TCCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGATTGCAAAGACACACTaGCGGCATACCCAGGATGCG | + |
|
Preference number: 4 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGIAKTH*RHTQDA Trigger: CGCATCCTGGGTATGCCGCCAGTGTGTCTTTGCAAT...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | GGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGAAGAGCAGAAAGGAGCTaGGAAGAGCGCTCTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GQRRGPLHSPGFQPGQEGRAERS*EERSPL Trigger: CAAGGGAGAGCGCTCTTCCCAGCTCCTTTCTGCTCT...TCCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR TCA 90 bp | GGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGACTCCAAACAGATCCTTaGGAATTCTCCCCATCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GQRRGPLHSPGFQPGQEGLQTDP*EFSPSP Trigger: GGGGGATGGGGAGAATTCTCAAGGATCTGTTTGGAG...TCCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237189.2 |
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| CDS-3UTR GCA 90 bp | GGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGACCTCTTAGTGGCGATTaGAAAGACACACTGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQRRGPLHSPGFQPGQEGPLSGD*KDTLAA Trigger: TGCCGCCAGTGTGTCTTTGCAATCGCCACTAAGAGG...TCCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | GGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGAATTGCAAAGACACACTaGCGGCATACCCAGGATGCG | + |
|
Preference number: 4 (lower is better) Translates to: GQRRGPLHSPGFQPGQEGIAKTH*RHTQDA Trigger: CGCATCCTGGGTATGCCGCCAGTGTGTCTTTGCAAT...TCCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
||
| CDS-3UTR TCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGCACTGTCCACCTTTTTaGTGGTACCCAAGTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGHCPPF*WYPSTA Trigger: TGCTGTACTTGGGTACCATCAAAAAGGTGGACAGTG...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | ATTAGGAGTCATGAAGGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCACCCAAAGCCGAGGTCTaGGGCCTGAGGTGGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IRSHEGAEKRTSSLPWIPPKAEV*GLRWEQ Trigger: CTGCTCCCACCTCAGGCCCCAGACCTCGGCTTTGGG...TGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCCTTCATGACTCCTAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | GGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGAGAATCGTCCTCAAACTaGACCAGACACACCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GQRRGPLHSPGFQPGQEGESSSN*TRHTSR Trigger: TCGAGAGGTGTGTCTGGTCCAGTTTGAGGACGATTC...TCCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | ATTAGGAGTCATGAAGGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGACAGCGGGCGTCTGTaGGCCGGAAGTTGTAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IRSHEGAEKRTSSLPWIPDSGRL*AGSCSR Trigger: GCGGCTACAACTTCCGGCCCACAGACGCCCGCTGTC...TGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCCTTCATGACTCCTAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR TCA 90 bp | GGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGATCTTACAGCAAACGCTaGGGTGGTAGAGGACAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GQRRGPLHSPGFQPGQEGSYSKR*GGRGQD Trigger: ATCTTGTCCTCTACCACCTCAGCGTTTGCTGTAAGA...TCCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | ATTAGGAGTCATGAAGGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCAGGGAGAGCTTCATaGCCAGCATGGCCCGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IRSHEGAEKRTSSLPWIPAGRAS*PAWPGH Trigger: ATGCCCGGGCCATGCTGGGCATGAAGCTCTCCCTGC...TGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCCTTCATGACTCCTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | CTCTTAGTGGCGATTGCAAAGACACACTGGCGGCATACCCAGGATGCGCCCTCTGCCCATCAGTCCATCTaGCCAGCACATCTTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLVAIAKTHWRHTQDAPSAHQSI*PAHLGL Trigger: AAGGCCAAGATGTGCTGGCCAGATGGACTGATGGGC...AGAGGGCGCATCCTGGGTATGCCGCCAGTGTGTCTTTGCAATCGCCACTAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| CDS-3UTR CCA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGATGAAACGGTCCTTGTaGCTGTTAAGAGCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGMKRSL*LLRAER Trigger: CCTTTCTGCTCTTAACAGCCACAAGGACCGTTTCAT...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | TCCCAGTCCAGCCCTTTTAATCCGTATGGCAGGGAGAGCTTCATGCCCAGCATGCGAGCACTGTCCACCTaGAATGGGTGCCCAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SQSSPFNPYGRESFMPSMRALST*NGCPVM Trigger: CATCACTGGGCACCCATTCCAGGTGGACAGTGCTCG...CATGCTGGGCATGAAGCTCTCCCTGCCATACGGATTAAAAGGGCTGGACTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| CDS-3UTR TCA 90 bp | CCAGCCGGTTCCCAGGTACCACGGTCTCAGAGCGACACACACAACAGAGCAGCTCCCAGTGATGCTTTTTaGTGGTACCCAAGTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PAGSQVPRSQSDTHNRAAPSDAF*WYPSTA Trigger: TGCTGTACTTGGGTACCATCAAAAAGCATCACTGGG...AGCTGCTCTGTTGTGTGTGTCGCTCTGAGACCGTGGTACCTGGGAACCGGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| CDS-3UTR GCA 90 bp | AGCATGGCGACACTTCTCACAGCTGACCAGCCGGTTCCCAGGTACCACGGTCTCTCCACCTGGAATGGGTaGCCAGTGATGCTTTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SMATLLTADQPVPRYHGLSTWNG*PVMLFD Trigger: ATCAAAAAGCATCACTGGGCACCCATTCCAGGTGGA...GAGACCGTGGTACCTGGGAACCGGCTGGTCAGCTGTGAGAAGTGTCGCCATGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| CDS-3UTR CCA 90 bp | ATTAGGAGTCATGAAGGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAATTGCAAAGACACACTaGCGGCATACCCAGGATGCG | + |
|
Preference number: 4 (lower is better) Translates to: IRSHEGAEKRTSSLPWIPIAKTH*RHTQDA Trigger: CGCATCCTGGGTATGCCGCCAGTGTGTCTTTGCAAT...TGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCCTTCATGACTCCTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | ATTAGGAGTCATGAAGGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAAGCTCTGCTGTCTGTTaGTCAAATGTCCAGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: IRSHEGAEKRTSSLPWIPSSAVC*SNVQHP Trigger: GGGATGCTGGACATTTGAGCAACAGACAGCAGAGCT...TGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCCTTCATGACTCCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCGACAGCGGGCGTCTGTaGGCCGGAAGTTGTAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LFIFITVIQSGILDHPNPDSGRL*AGSCSR Trigger: GCGGCTACAACTTCCGGCCCACAGACGCCCGCTGTC...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR TCA 90 bp | ATTAGGAGTCATGAAGGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCACACTGTCCACCTTTTTaGTGGTACCCAAGTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IRSHEGAEKRTSSLPWIPHCPPF*WYPSTA Trigger: TGCTGTACTTGGGTACCATCAAAAAGGTGGACAGTG...TGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCCTTCATGACTCCTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCGCAGGGAGAGCTTCATaGCCAGCATGGCCCGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFIFITVIQSGILDHPNPAGRAS*PAWPGH Trigger: ATGCCCGGGCCATGCTGGGCATGAAGCTCTCCCTGC...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCATGCCGACTGTGTGCTaGCGTGGGTGGCCCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFIFITVIQSGILDHPNPMPTVC*RGWPQF Trigger: GAACTGGGGCCACCCACGGCAGCACACAGTCGGCAT...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCGCCTCATGGAACCACTaGAGGCAGCTCCGGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFIFITVIQSGILDHPNPASWNH*RQLRHC Trigger: GCAGTGCCGGAGCTGCCTCCAGTGGTTCCATGAGGC...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCGCCCTGAAGGGAAGCTaGTGGGGGCTCCATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFIFITVIQSGILDHPNPALKGS*WGLHLQ Trigger: CTGGAGATGGAGCCCCCACCAGCTTCCCTTCAGGGC...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073724.7 ENSMUST00000237412.2 |
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| CDS-3UTR TCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCTCCCTTGGGAGTATCTaGGAGCTCCCCCAGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFIFITVIQSGILDHPNPSLGSI*ELPQEQ Trigger: CTGCTCCTGGGGGAGCTCTCAGATACTCCCAAGGGA...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR TCA 90 bp | ATTAGGAGTCATGAAGGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCATTTAATCTCCCTCCCTaGAATGAAACGGTCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IRSHEGAEKRTSSLPWIPFNLPP*NETVLV Trigger: CACAAGGACCGTTTCATTTCAGGGAGGGAGATTAAA...TGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCCTTCATGACTCCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR TCA 90 bp | GGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCAGGGCCCTGCCCTaGAGGGAAGCTGTAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLFIFITVIQSGILDHPNPRALP*REAVRG Trigger: ACCTCTTACAGCTTCCCTTCAGGGCAGGGCCCTGGG...GTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237189.2 |
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| CDS-3UTR GCA 90 bp | GTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCGCAGGGAGAGCTTCATaGCCAGCATGGCCCGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VYLSLLQSYSLESWTTQTAGRAS*PAWPGH Trigger: ATGCCCGGGCCATGCTGGGCATGAAGCTCTCCCTGC...GGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | GTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCATGCCGACTGTGTGCTaGCGTGGGTGGCCCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VYLSLLQSYSLESWTTQTMPTVC*RGWPQF Trigger: GAACTGGGGCCACCCACGGCAGCACACAGTCGGCAT...GGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | GGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACATGCCGACTGTGTGCTaGCGTGGGTGGCCCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLFIFITVIQSGILDHPNMPTVC*RGWPQF Trigger: GAACTGGGGCCACCCACGGCAGCACACAGTCGGCAT...GTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | CTACTAGGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCCAAAGCCGAGGTCTaGGGCCTGAGGTGGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGLFIFITVIQSGILDHPKAEV*GLRWEQ Trigger: CTGCTCCCACCTCAGGCCCCAGACCTCGGCTTTGGG...GTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACCTAGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073724.7 |
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| CDS-3UTR CCA 90 bp | ATTAGGAGTCATGAAGGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCACATAGAACCAGAAACTaGGAATCGTCCTCAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: IRSHEGAEKRTSSLPWIPHRTRN*ESSSNW Trigger: CCAGTTTGAGGACGATTCCCAGTTTCTGGTTCTATG...TGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCCTTCATGACTCCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | GTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCGCCTCATGGAACCACTaGAGGCAGCTCCGGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VYLSLLQSYSLESWTTQTASWNH*RQLRHC Trigger: GCAGTGCCGGAGCTGCCTCCAGTGGTTCCATGAGGC...GGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | ATTAGGAGTCATGAAGGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAATGAAACGGTCCTTGTaGCTGTTAAGAGCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IRSHEGAEKRTSSLPWIPMKRSL*LLRAER Trigger: CCTTTCTGCTCTTAACAGCCACAAGGACCGTTTCAT...TGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCCTTCATGACTCCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACGCCCTGAAGGGAAGCTaGTGGGGGCTCCATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLFIFITVIQSGILDHPNALKGS*WGLHLQ Trigger: CTGGAGATGGAGCCCCCACCAGCTTCCCTTCAGGGC...GTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073724.7 ENSMUST00000237412.2 |
||
| CDS-3UTR CCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCGTGTGCTGCCGTGGGTaGCCCCAGTTCCTCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFIFITVIQSGILDHPNPVCCRG*PQFLHF Trigger: AAAGTGGAGGAACTGGGGCCACCCACGGCAGCACAC...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTACTAGGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACGACAGCGGGCGTCTGTaGGCCGGAAGTTGTAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CLLGLFIFITVIQSGILDDSGRL*AGSCSR Trigger: GCGGCTACAACTTCCGGCCCACAGACGCCCGCTGTC...GTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACCTAGTAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073724.7 |
||
| CDS-3UTR TCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCGACACTTCTCACAGCTaGCCAGCCGGTTCCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LFIFITVIQSGILDHPNPDTSHS*PAGSQV Trigger: TACCTGGGAACCGGCTGGTCAGCTGTGAGAAGTGTC...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAGGGCTCCATCTCCAGTaGGAAGCTCCACAGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGLFIFITVIQSGILDHPGLHLQ*EAPQEE Trigger: CTCCTCCTGTGGAGCTTCTCACTGGAGATGGAGCCC...TGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073724.7 |
||
| CDS-3UTR GCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCGGGACCTTTCTTCAGTaGGCCTCCCCTCTTAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFIFITVIQSGILDHPNPGTFLQ*ASPLSG Trigger: GCCACTAAGAGGGGAGGCGCACTGAAGAAAGGTCCC...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | GGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCAGAGGTCCCTGCAGTaGTGGCAGAAGGGTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLFIFITVIQSGILDHPNQRSLQ*WQKGGR Trigger: CCTTCCACCCTTCTGCCAGCACTGCAGGGACCTCTG...GTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | GTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCAGAGGTCCCTGCAGTaGTGGCAGAAGGGTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYLSLLQSYSLESWTTQTQRSLQ*WQKGGR Trigger: CCTTCCACCCTTCTGCCAGCACTGCAGGGACCTCTG...GGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | GTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCGCTTCATGCCCAGCATaGCCCGGGCATAGGGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: VYLSLLQSYSLESWTTQTASCPA*PGHRDL Trigger: AAGGTCCCTATGCCCGGGCCATGCTGGGCATGAAGC...GGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | GGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACGTGCTGGCAGAAGGGTaGAAGGAGGCGAACATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GLFIFITVIQSGILDHPNVLAEG*KEANIR Trigger: CCGGATGTTCGCCTCCTTCCACCCTTCTGCCAGCAC...GTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | GGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACGGGACCTTTCTTCAGTaGGCCTCCCCTCTTAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLFIFITVIQSGILDHPNGTFLQ*ASPLSG Trigger: GCCACTAAGAGGGGAGGCGCACTGAAGAAAGGTCCC...GTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCTGCTCAGACACTGGGTaGAGGCCTCATGGAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: LFIFITVIQSGILDHPNPCSDTG*RPHGTT Trigger: AGTGGTTCCATGAGGCCTGCACCCAGTGTCTGAGCA...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | CTACTAGGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCGTAGAGGAGGGGCTTaGTCAGACACTGGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGLFIFITVIQSGILDHRRGGA*SDTGCR Trigger: CCTGCACCCAGTGTCTGAGCAAGCCCCTCCTCTACG...GTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACCTAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073724.7 |
||
| CDS-3UTR GCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCGGAAGTTGTAGCCGCTaGTGCCCTCATAGCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFIFITVIQSGILDHPNPGSCSR*CPHSSG Trigger: ACCAGAGCTATGAGGGCAGCAGCGGCTACAACTTCC...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | CTACTAGGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACGCTTCATGCCCAGCATaGCCCGGGCATAGGGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLGLFIFITVIQSGILDHASCPA*PGHRDL Trigger: AAGGTCCCTATGCCCGGGCCATGCTGGGCATGAAGC...GTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACCTAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073724.7 |
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| CDS-3UTR CCA 90 bp | GTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCGGCTTGCTCAGACACTaGGTGCAGGCCTCATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VYLSLLQSYSLESWTTQTGLLRH*VQASWN Trigger: GTTCCATGAGGCCTGCACCCAGTGTCTGAGCAAGCC...GGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR TCA 90 bp | GGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACGGAGGGCAGCTGGGCTaGTATCCTTCCATAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: GLFIFITVIQSGILDHPNGGQLG*YPSIEP Trigger: TGGTTCTATGGAAGGATATCAGCCCAGCTGCCCTCC...GTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR TCA 90 bp | GTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCAAGGGAGAAGGGGGTaGATGTCTGGAAAAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VYLSLLQSYSLESWTTQTQGRRG*MSGKAW Trigger: CCAGGCTTTTCCAGACATTCACCCCCTTCTCCCTTG...GGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
||
| CDS-3UTR GCA 90 bp | GTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCTGCTCAGACACTGGGTaGAGGCCTCATGGAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: VYLSLLQSYSLESWTTQTCSDTG*RPHGTT Trigger: AGTGGTTCCATGAGGCCTGCACCCAGTGTCTGAGCA...GGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | GTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCGGAAGTTGTAGCCGCTaGTGCCCTCATAGCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VYLSLLQSYSLESWTTQTGSCSR*CPHSSG Trigger: ACCAGAGCTATGAGGGCAGCAGCGGCTACAACTTCC...GGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | CTACTAGGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACGGCTTGCTCAGACACTaGGTGCAGGCCTCATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLGLFIFITVIQSGILDHGLLRH*VQASWN Trigger: GTTCCATGAGGCCTGCACCCAGTGTCTGAGCAAGCC...GTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACCTAGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073724.7 |
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| CDS-3UTR CCA 90 bp | GTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCAGAGCAGAAAGGAGCTaGGAAGAGCGCTCTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VYLSLLQSYSLESWTTQTRAERS*EERSPL Trigger: CAAGGGAGAGCGCTCTTCCCAGCTCCTTTCTGCTCT...GGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | GGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCTCTTAGTGGCGATTaGAAAGACACACTGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLFIFITVIQSGILDHPNPLSGD*KDTLAA Trigger: TGCCGCCAGTGTGTCTTTGCAATCGCCACTAAGAGG...GTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | TGCCTACTAGGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACGGAAGTTGTAGCCGCTaGTGCCCTCATAGCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLLGLFIFITVIQSGILDGSCSR*CPHSSG Trigger: ACCAGAGCTATGAGGGCAGCAGCGGCTACAACTTCC...GTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACCTAGTAGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073724.7 |
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| CDS-3UTR CCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCGAATCGTCCTCAAACTaGACCAGACACACCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LFIFITVIQSGILDHPNPESSSN*TRHTSR Trigger: TCGAGAGGTGTGTCTGGTCCAGTTTGAGGACGATTC...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR TCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCTCTTACAGCAAACGCTaGGGTGGTAGAGGACAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LFIFITVIQSGILDHPNPSYSKR*GGRGQD Trigger: ATCTTGTCCTCTACCACCTCAGCGTTTGCTGTAAGA...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | CTAGGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAGAATCGTCCTCAAACTaGACCAGACACACCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LGLFIFITVIQSGILDHPESSSN*TRHTSR Trigger: TCGAGAGGTGTGTCTGGTCCAGTTTGAGGACGATTC...TGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073724.7 |
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| CDS-3UTR TCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCTTTAATCTCCCTCCCTaGAATGAAACGGTCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFIFITVIQSGILDHPNPFNLPP*NETVLV Trigger: CACAAGGACCGTTTCATTTCAGGGAGGGAGATTAAA...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | CTACTAGGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACAGCTCTGCTGTCTGTTaGTCAAATGTCCAGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLGLFIFITVIQSGILDHSSAVC*SNVQHP Trigger: GGGATGCTGGACATTTGAGCAACAGACAGCAGAGCT...GTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACCTAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073724.7 |
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| CDS-3UTR CCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCCATAGAACCAGAAACTaGGAATCGTCCTCAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFIFITVIQSGILDHPNPHRTRN*ESSSNW Trigger: CCAGTTTGAGGACGATTCCCAGTTTCTGGTTCTATG...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCATGAAACGGTCCTTGTaGCTGTTAAGAGCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFIFITVIQSGILDHPNPMKRSL*LLRAER Trigger: CCTTTCTGCTCTTAACAGCCACAAGGACCGTTTCAT...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR TCA 90 bp | CTACTAGGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCACTGTCCACCTTTTTaGTGGTACCCAAGTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLGLFIFITVIQSGILDHHCPPF*WYPSTA Trigger: TGCTGTACTTGGGTACCATCAAAAAGGTGGACAGTG...GTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACCTAGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073724.7 |
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| CDS-3UTR TCA 90 bp | GGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACTTTAATCTCCCTCCCTaGAATGAAACGGTCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLFIFITVIQSGILDHPNFNLPP*NETVLV Trigger: CACAAGGACCGTTTCATTTCAGGGAGGGAGATTAAA...GTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR GCA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCCCCATTTTCTTTATATaGACCCTCCAAACAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFIFITVIQSGILDHPNPPIFFI*TLQTDP Trigger: AGGATCTGTTTGGAGGGTGCATATAAAGAAAATGGG...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000237189.2 |
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| CDS-3UTR CAA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGTCTGGCCAGCACATCTaGGCCTTCCCAAAGCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGSGQHI*AFPKPR Trigger: CCTCGGCTTTGGGAAGGCCAAGATGTGCTGGCCAGA...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS CCA 90 bp | GTACCCAAGTACAGCAGCCCATCAGTCCATCTGGCCAGCACATCTTaGCCTTCCCAAAGCCGAGGTCTGGGGCCTGAGGTGGGAGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPKYSSPSVHLASTS*PSQSRGLGPEVGAG Trigger: CCCTGCTCCCACCTCAGGCCCCAGACCTCGGCTTTGGGAAGGCCAAGATGTGCTGGCCAGATGGACTGATGGGCTGCTGTACTTGGGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073724.7 ENSMUST00000236269.2 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CAA 90 bp | CCGGTTCCCAGGTACCACGGTCTCAGAGCGACACACACAACAGAGCAGCTCCTCTCTGGCCAGCACATCTaGGCCTTCCCAAAGCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PVPRYHGLRATHTTEQLLSGQHI*AFPKPR Trigger: CCTCGGCTTTGGGAAGGCCAAGATGTGCTGGCCAGA...GAGGAGCTGCTCTGTTGTGTGTGTCGCTCTGAGACCGTGGTACCTGGGAACCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| CDS-3UTR CAA 90 bp | GGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGACCTCCAAACAGATCCTaGAGAATTCTCCCCATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GQRRGPLHSPGFQPGQEGPPNRS*RILPIP Trigger: GGGGATGGGGAGAATTCTCAAGGATCTGTTTGGAGG...TCCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237189.2 |
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| CDS-3UTR CAA 90 bp | GGGGCAGAGAAGAGGACCTCTTCACTCCCCTGGATTCCAGCCTGGGCAGGAGGGGAAATGAAACGGTCCTaGTGGCTGTTAAGAGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GAEKRTSSLPWIPAWAGGEMKRS*WLLRAE Trigger: TTCTGCTCTTAACAGCCACAAGGACCGTTTCATTTC...CCCTCCTGCCCAGGCTGGAATCCAGGGGAGTGAAGAGGTCCTCTTCTCTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS CCA 90 bp | CCAGGGAGGGCAGCTGGGCTGATATCCTTCCATAGAACCAGAAACTaGGAATCGTCCTCAAACTGGACCAGACACACCTCTCGAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PGRAAGLISFHRTRN*ESSSNWTRHTSRAL Trigger: CAGTGCTCGAGAGGTGTGTCTGGTCCAGTTTGAGGACGATTCCCAGTTTCTGGTTCTATGGAAGGATATCAGCCCAGCTGCCCTCCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS TCA 90 bp | GGATCTCTCGGTCAAAATCAAAATATTTCTTCTTACAGCAAACGCTaGGGTGGTAGAGGACAAGATGGGCCACATCCACCCAGCGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSLGQNQNISSYSKR*GGRGQDGPHPPSEA Trigger: AGCTTCGCTGGGTGGATGTGGCCCATCTTGTCCTCTACCACCTCAGCGTTTGCTGTAAGAAGAAATATTTTGATTTTGACCGAGAGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS CCA 90 bp | CTGATATCCTTCCATAGAACCAGAAACTGGGAATCGTCCTCAAACTaGACCAGACACACCTCTCGAGCACTGTCCACCTTTTTGATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LISFHRTRNWESSSN*TRHTSRALSTFLMV Trigger: TACCATCAAAAAGGTGGACAGTGCTCGAGAGGTGTGTCTGGTCCAGTTTGAGGACGATTCCCAGTTTCTGGTTCTATGGAAGGATATCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CAA 90 bp | CTAGGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCATCTGGCCAGCACATCTaGGCCTTCCCAAAGCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGLFIFITVIQSGILDHPSGQHI*AFPKPR Trigger: CCTCGGCTTTGGGAAGGCCAAGATGTGCTGGCCAGA...TGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073724.7 |
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| CDS-3UTR CAA 90 bp | GGTTTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACTCTGGCCAGCACATCTaGGCCTTCCCAAAGCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLFIFITVIQSGILDHPNSGQHI*AFPKPR Trigger: CCTCGGCTTTGGGAAGGCCAAGATGTGCTGGCCAGA...GTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS-3UTR CAA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCGAAGAGCGCTCTCCCTaGGGAGTATCTGAGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFIFITVIQSGILDHPNPEERSP*GVSESS Trigger: GGAGCTCTCAGATACTCCCAAGGGAGAGCGCTCTTC...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
||
| CDS-3UTR CAA 90 bp | TTATTTATCTTTATTACAGTCATACAGTCTGGAATCCTGGACCACCCAAACCCCGAAATGAAACGGTCCTaGTGGCTGTTAAGAGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LFIFITVIQSGILDHPNPEMKRS*WLLRAE Trigger: TTCTGCTCTTAACAGCCACAAGGACCGTTTCATTTC...GGGGTTTGGGTGGTCCAGGATTCCAGACTGTATGACTGTAATAAAGATAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS GCA 72 bp | GGGGGTGGTGGAGACACCGAGGCCTGCAGGGCCCTCTaGTCCCGGGACCCATGCCGACTGTGTGCTGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: GGGGDTEACRAL*SRDPCRLCAAV Trigger: CACGGCAGCACACAGTCGGCATGGGTCCCGGGAGCAGAGGGCCCTGCAGGCCTCGGTGTCTCCACCACCCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS GCA 72 bp | CAGGGCCCTCTGCTCCCGGGACCCATGCCGACTGTGTaGTGCCGTGGGTGGCCCCAGTTCCTCCACTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: QGPLLPGPMPTV*CRGWPQFLHFP Trigger: GGGAAAGTGGAGGAACTGGGGCCACCCACGGCAGCACACAGTCGGCATGGGTCCCGGGAGCAGAGGGCCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS TCA 72 bp | GCCCTGAAGGGAAGCTGGTGGGGGCTCCATCTCCAGTaGGAAGCTCCACAGGAGGAGGGGTCCGAGCATGGA | + |
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Preference number: 6 (lower is better) Translates to: ALKGSWWGLHLQ*EAPQEEGSEHG Trigger: TCCATGCTCGGACCCCTCCTCCTGTGGAGCTTCTCACTGGAGATGGAGCCCCCACCAGCTTCCCTTCAGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073724.7 ENSMUST00000237412.2 |
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| CDS CCA 72 bp | TACAGCAGCCCATCAGTCCATCTGGCCAGCACATCTTaGCCTTCCCAAAGCCGAGGTCTGGGGCCTGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: YSSPSVHLASTS*PSQSRGLGPEV Trigger: CACCTCAGGCCCCAGACCTCGGCTTTGGGAAGGCCAAGATGTGCTGGCCAGATGGACTGATGGGCTGCTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073724.7 ENSMUST00000236269.2 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS TCA 72 bp | AAGGAGCTGGGAAGAGCGCTCTCCCTTGGGAGTATCTaGGAGCTCCCCCAGGAGCAGACTGTCCCAATTCTC | + |
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Preference number: 6 (lower is better) Translates to: KELGRALSLGSI*ELPQEQTVPIL Trigger: GAGAATTGGGACAGTCTGCTCCTGGGGGAGCTCTCAGATACTCCCAAGGGAGAGCGCTCTTCCCAGCTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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| CDS CCA 72 bp | AACTGGACCAGACACACCTCTCGAGCACTGTCCACCTaGAATGGGTGCCCAGTGATGCTTTTTGATGGTACC | + |
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Preference number: 6 (lower is better) Translates to: NWTRHTSRALST*NGCPVMLFDGT Trigger: GGTACCATCAAAAAGCATCACTGGGCACCCATTCCAGGTGGACAGTGCTCGAGAGGTGTGTCTGGTCCAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| CDS TCA 72 bp | ACTGTCCACCTGGAATGGGTGCCCAGTGATGCTTTTTaGTGGTACCCAAGTACAGCAGCCCATCAGTCCATC | + |
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Preference number: 6 (lower is better) Translates to: TVHLEWVPSDAF*WYPSTAAHQSI Trigger: GATGGACTGATGGGCTGCTGTACTTGGGTACCATCAAAAAGCATCACTGGGCACCCATTCCAGGTGGACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236269.2 |
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| CDS CCA 72 bp | GCAGCTGGGCTGATATCCTTCCATAGAACCAGAAACTaGGAATCGTCCTCAAACTGGACCAGACACACCTCT | + |
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Preference number: 6 (lower is better) Translates to: AAGLISFHRTRN*ESSSNWTRHTS Trigger: AGAGGTGTGTCTGGTCCAGTTTGAGGACGATTCCCAGTTTCTGGTTCTATGGAAGGATATCAGCCCAGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073724.7 ENSMUST00000237189.2 ENSMUST00000237412.2 |
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