Pregenerated sensors for PHEX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057457Ensembl transcript IDs: ENSMUST00000079945.11, ENSMUST00000135713.8, ENSMUST00000138396.3
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGTATCCCGAAGCACAAAACCTGTCCTTCCATGCCCTGAGATCTTaGACAAGCAATTCTAAGCTTTCCCATTTCTCTTGGCATGAGCAC | + |
|
Preference number: 1 (lower is better) Translates to: QYPEAQNLSFHALRS*TSNSKLSHFSWHEH Trigger: GTGCTCATGCCAAGAGAAATGGGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTGTGCTTCGGGATACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR GCA 90 bp | AACACAGCTGAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTaGTATCCATCAGACAGATGCTCACCATCATACAGAGGGACTGGA | + |
|
Preference number: 1 (lower is better) Translates to: NTAEQNKTKSELLLD*YPSDRCSPSYRGTG Trigger: TCCAGTCCCTCTGTATGATGGTGAGCATCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTCAGCTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR TCA 90 bp | ATAGGGCACACGTCTTTATCATTGAGGGTGACAATTTTCATTGACTaGTCCTTTCTATGGATACACTCTACTCAGGCCCCCTGCAAAGCT | + |
|
Preference number: 1 (lower is better) Translates to: IGHTSLSLRVTIFID*SFLWIHSTQAPCKA Trigger: AGCTTTGCAGGGGGCCTGAGTAGAGTGTATCCATAGAAAGGATCAGTCAATGAAAATTGTCACCCTCAATGATAAAGACGTGTGCCCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR TCA 90 bp | ATCCATCTAATAAAAGAGAGTGAGGCAGGAATAGGAGGCCTATACTaGGTATTTGGTGAAAAACTCAGCAAACTTTGGACAACGGTAGTA | + |
|
Preference number: 1 (lower is better) Translates to: IHLIKESEAGIGGLY*VFGEKLSKLWTTVV Trigger: TACTACCGTTGTCCAAAGTTTGCTGAGTTTTTCACCAAATACTCAGTATAGGCCTCCTATTCCTGCCTCACTCTCTTTTATTAGATGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR TCA 90 bp | CAGCTGCTATATGAGTCAGAGCAGTGTGTTGCTGTAGCCCTAGTCTaGGATCCAATATTTAATTTCCCTTTGATTTACCATAATTATTTT | + |
|
Preference number: 1 (lower is better) Translates to: QLLYESEQCVAVALV*DPIFNFPLIYHNYF Trigger: AAAATAATTATGGTAAATCAAAGGGAAATTAAATATTGGATCTCAGACTAGGGCTACAGCAACACACTGCTCTGACTCATATAGCAGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGCCCTTCAGAAGTGTATCCATTCGGAGAGGAGGAAGTCAAGGGGAAAATCGCCAAGAAGTGGGAGTaGGTGGTTAGGGGAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: CCPSEVYPFGEEEVKGKIAKKWE*VVRGAG Trigger: CCCTGCTCCCCTAACCACCCACTCCCACTTCTTGGC...GATTTTCCCCTTGACTTCCTCCTCTCCGAATGGATACACTTCTGAAGGGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGTCATGCCCCAATCCATCTAATAAAAGAGAGTGAGGCAGGAATAGGAGGCGACAGAAGAGCATCTTaGCCCCTCCTCAGCGTGGCG | + |
|
Preference number: 2 (lower is better) Translates to: SSHAPIHLIKESEAGIGGDRRAS*PLLSVA Trigger: CGCCACGCTGAGGAGGGGGCAAGATGCTCTTCTGTC...GCCTCCTATTCCTGCCTCACTCTCTTTTATTAGATGGATTGGGGCATGACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCGACAGAAGAGCATCTTaGCCCCTCCTCAGCGTGGCG | + |
|
Preference number: 2 (lower is better) Translates to: QNLSFHALRSWTSNSKLSDRRAS*PLLSVA Trigger: CGCCACGCTGAGGAGGGGGCAAGATGCTCTTCTGTC...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCGCCAAGAAGTGGGAGTaGGTGGTTAGGGGAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: QNLSFHALRSWTSNSKLSAKKWE*VVRGAG Trigger: CCCTGCTCCCCTAACCACCCACTCCCACTTCTTGGC...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCTGCCCTTCAGAAGTGTATCCATTCGGAGAGGAGGAAGTCAAGGGGAAAATCGGCATTCCTCAGCTATaGCAGGAAGGCAGAAACCAG | + |
|
Preference number: 2 (lower is better) Translates to: CCPSEVYPFGEEEVKGKIGIPQL*QEGRNQ Trigger: CTGGTTTCTGCCTTCCTGGCATAGCTGAGGAATGCC...GATTTTCCCCTTGACTTCCTCCTCTCCGAATGGATACACTTCTGAAGGGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCCTAGTCGGCCATCATTaGGAAGAGAGGCCCCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: QNLSFHALRSWTSNSKLSLVGHH*EERPLG Trigger: ACCAAGGGGCCTCTCTTCCCAATGATGGCCGACTAG...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGTGGGCTGAGACAGAAGAGCATCTTGCCCCCTCCTCAGCGTGGCGTTTATTGCAAAGCTGTAGATTaGAATGTCATGTACCACCGA | + |
|
Preference number: 2 (lower is better) Translates to: LSGLRQKSILPPPQRGVYCKAVD*NVMYHR Trigger: TCGGTGGTACATGACATTTCAATCTACAGCTTTGCA...ATAAACGCCACGCTGAGGAGGGGGCAAGATGCTCTTCTGTCTCAGCCCACTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGTCATGCCCCAATCCATCTAATAAAAGAGAGTGAGGCAGGAATAGGAGGCGTCAGAGCAGTGTGTTaGTGTAGCCCTAGTCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SSHAPIHLIKESEAGIGGVRAVC*CSPSLR Trigger: TCTCAGACTAGGGCTACAGCAACACACTGCTCTGAC...GCCTCCTATTCCTGCCTCACTCTCTTTTATTAGATGGATTGGGGCATGACTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCGCACTCTCTGTCTGCTaGGCCTTAGTTCCTAGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: QNLSFHALRSWTSNSKLSALSVC*ALVPSF Trigger: GAAACTAGGAACTAAGGCTCAGCAGACAGAGAGTGC...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGCCCTTCAGAAGTGTATCCATTCGGAGAGGAGGAAGTCAAGGGGAAAATCTGCAAAGCTGTAGATTaGAATGTCATGTACCACCGA | + |
|
Preference number: 2 (lower is better) Translates to: CCPSEVYPFGEEEVKGKICKAVD*NVMYHR Trigger: TCGGTGGTACATGACATTTCAATCTACAGCTTTGCA...GATTTTCCCCTTGACTTCCTCCTCTCCGAATGGATACACTTCTGAAGGGCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGTGGGCTGAGACAGAAGAGCATCTTGCCCCCTCCTCAGCGTGGCGTTTATAAAGCCATATGTTCCTaGCATGGAAACAAAACATTC | + |
|
Preference number: 2 (lower is better) Translates to: LSGLRQKSILPPPQRGVYKAICS*HGNKTF Trigger: GAATGTTTTGTTTCCATGTCAGGAACATATGGCTTT...ATAAACGCCACGCTGAGGAGGGGGCAAGATGCTCTTCTGTCTCAGCCCACTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCAGAACAGCTGCTATATaGGTCAGAGCAGTGTGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: QNLSFHALRSWTSNSKLSRTAAI*VRAVCC Trigger: GCAACACACTGCTCTGACTCATATAGCAGCTGTTCT...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGTCATGCCCCAATCCATCTAATAAAAGAGAGTGAGGCAGGAATAGGAGGCGGAAGAGAGGCCCCTTaGTCTTGCAAACTTTATATG | + |
|
Preference number: 2 (lower is better) Translates to: SSHAPIHLIKESEAGIGGGREAP*SCKLYM Trigger: CATATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCC...GCCTCCTATTCCTGCCTCACTCTCTTTTATTAGATGGATTGGGGCATGACTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCTCTAATAAAAGAGAGTaGGGCAGGAATAGGAGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: QNLSFHALRSWTSNSKLSSNKRE*GRNRRP Trigger: AGGCCTCCTATTCCTGCCTCACTCTCTTTTATTAGA...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGCCCTTCAGAAGTGTATCCATTCGGAGAGGAGGAAGTCAAGGGGAAAATCTGTACCACCGAGCTGTaGTTAACAGAAATGGATAAT | + |
|
Preference number: 2 (lower is better) Translates to: CCPSEVYPFGEEEVKGKICTTEL*LTEMDN Trigger: ATTATCCATTTCTGTTAACCACAGCTCGGTGGTACA...GATTTTCCCCTTGACTTCCTCCTCTCCGAATGGATACACTTCTGAAGGGCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAATAAAAATGAGTATTGACAAATCAGAATGGCTACACCAGAGAAAAGGCACAGCCAAGGCCAAGAAGTaGGAGTGGGTGGTTAGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: GIKMSIDKSEWLHQRKGTAKAKK*EWVVRG Trigger: TCCCCTAACCACCCACTCCCACTTCTTGGCCTTGGC...TGTGCCTTTTCTCTGGTGTAGCCATTCTGATTTGTCAATACTCATTTTTATTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGCCCTTCAGAAGTGTATCCATTCGGAGAGGAGGAAGTCAAGGGGAAAATCTATGCTAAAAGGAAATaGAAGCCATATGTTCCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: CCPSEVYPFGEEEVKGKIYAKRK*KPYVPD Trigger: GTCAGGAACATATGGCTTTCATTTCCTTTTAGCATA...GATTTTCCCCTTGACTTCCTCCTCTCCGAATGGATACACTTCTGAAGGGCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGCCCTTCAGAAGTGTATCCATTCGGAGAGGAGGAAGTCAAGGGGAAAATCCTCCTGTGGTTCATCTaGATTTGTCATTTTGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: CCPSEVYPFGEEEVKGKILLWFI*ICHFAF Trigger: AAAAGCAAAATGACAAATTCAGATGAACCACAGGAG...GATTTTCCCCTTGACTTCCTCCTCTCCGAATGGATACACTTCTGAAGGGCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGTCATGCCCCAATCCATCTAATAAAAGAGAGTGAGGCAGGAATAGGAGGCGGTGACAATTTTCATTaGCTGATCCTTTCTATGGAT | + |
|
Preference number: 2 (lower is better) Translates to: SSHAPIHLIKESEAGIGGGDNFH*LILSMD Trigger: ATCCATAGAAAGGATCAGTCAATGAAAATTGTCACC...GCCTCCTATTCCTGCCTCACTCTCTTTTATTAGATGGATTGGGGCATGACTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCGCTGTAGCCCTAGTCTaGGATCCAATATTTAATTTC | + |
|
Preference number: 2 (lower is better) Translates to: QNLSFHALRSWTSNSKLSAVALV*DPIFNF Trigger: GAAATTAAATATTGGATCTCAGACTAGGGCTACAGC...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGACTTGCAAACTTTATATaGCCCAGTACAGGTGAACGC | + |
|
Preference number: 2 (lower is better) Translates to: EQNKTKSELLLDCYPSDRLANFI*PSTGER Trigger: GCGTTCACCTGTACTGGGGCATATAAAGTTTGCAAG...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CCA 90 bp | TATAAGCCTGGCAAACTTCGGTGTTCAGGAATAAAAATGAGTATTGACAAATCACTAGTCGGCCATCATTaGGAAGAGAGGCCCCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: YKPGKLRCSGIKMSIDKSLVGHH*EERPLG Trigger: ACCAAGGGGCCTCTCTTCCCAATGATGGCCGACTAG...TGATTTGTCAATACTCATTTTTATTCCTGAACACCGAAGTTTGCCAGGCTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR GCA 90 bp | TATAAGCCTGGCAAACTTCGGTGTTCAGGAATAAAAATGAGTATTGACAAATCAGGCATTCCTCAGCTATaGCAGGAAGGCAGAAACCAG | + |
|
Preference number: 2 (lower is better) Translates to: YKPGKLRCSGIKMSIDKSGIPQL*QEGRNQ Trigger: CTGGTTTCTGCCTTCCTGGCATAGCTGAGGAATGCC...TGATTTGTCAATACTCATTTTTATTCCTGAACACCGAAGTTTGCCAGGCTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCATCTTACAGCAGTCATaGCCCAATCCATCTAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: QNLSFHALRSWTSNSKLSILQQS*PNPSNK Trigger: TTTATTAGATGGATTGGGGCATGACTGCTGTAAGAT...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCAATCCTTCACCTTTATaGCATGTTTGTTCATGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: QNLSFHALRSWTSNSKLSNPSPL*HVCSCL Trigger: TAAGCATGAACAAACATGGCATAAAGGTGAAGGATT...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAATAAAAATGAGTATTGACAAATCAGAATGGCTACACCAGAGAAAAGGCACAGGAAGAAAAGGCTGCTaGCCTTCAGAAGTGTATCCA | + |
|
Preference number: 2 (lower is better) Translates to: GIKMSIDKSEWLHQRKGTGRKGC*PSEVYP Trigger: TGGATACACTTCTGAAGGGCAGCAGCCTTTTCTTCC...TGTGCCTTTTCTCTGGTGTAGCCATTCTGATTTGTCAATACTCATTTTTATTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGATGTACCACCGAGCTGTaGTTAACAGAAATGGATAAT | + |
|
Preference number: 2 (lower is better) Translates to: EQNKTKSELLLDCYPSDRCTTEL*LTEMDN Trigger: ATTATCCATTTCTGTTAACCACAGCTCGGTGGTACA...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGAAATAGACTCCAAACCTaGAGAGAAAAACTTCCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: EQNKTKSELLLDCYPSDRNRLQT*REKLPS Trigger: ACTAGGAAGTTTTTCTCTTCAGGTTTGGAGTCTATT...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAATAAAAATGAGTATTGACAAATCAGAATGGCTACACCAGAGAAAAGGCACAGGAAGAGAGGCCCCTTaGTCTTGCAAACTTTATATG | + |
|
Preference number: 2 (lower is better) Translates to: GIKMSIDKSEWLHQRKGTGREAP*SCKLYM Trigger: CATATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCC...TGTGCCTTTTCTCTGGTGTAGCCATTCTGATTTGTCAATACTCATTTTTATTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAATAAAAATGAGTATTGACAAATCAGAATGGCTACACCAGAGAAAAGGCACAAATAGACTCCAAACCTaGAGAGAAAAACTTCCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: GIKMSIDKSEWLHQRKGTNRLQT*REKLPS Trigger: ACTAGGAAGTTTTTCTCTTCAGGTTTGGAGTCTATT...TGTGCCTTTTCTCTGGTGTAGCCATTCTGATTTGTCAATACTCATTTTTATTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CCA 90 bp | TATAAGCCTGGCAAACTTCGGTGTTCAGGAATAAAAATGAGTATTGACAAATCAGGTCACTTTAAACCATaGATAAGAGGAAGAAAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: YKPGKLRCSGIKMSIDKSGHFKP*IRGRKG Trigger: GCCTTTTCTTCCTCTTATCCATGGTTTAAAGTGACC...TGATTTGTCAATACTCATTTTTATTCCTGAACACCGAAGTTTGCCAGGCTTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR TCA 90 bp | TATAAGCCTGGCAAACTTCGGTGTTCAGGAATAAAAATGAGTATTGACAAATCAACCTTTCATAAGATGTaGAGAGTAAAGCTATGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: YKPGKLRCSGIKMSIDKSTFHKM*RVKLCP Trigger: AGGACATAGCTTTACTCTTCACATCTTATGAAAGGT...TGATTTGTCAATACTCATTTTTATTCCTGAACACCGAAGTTTGCCAGGCTTATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAATAAAAATGAGTATTGACAAATCAGAATGGCTACACCAGAGAAAAGGCACAAATCCTTCACCTTTATaGCATGTTTGTTCATGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: GIKMSIDKSEWLHQRKGTNPSPL*HVCSCL Trigger: TAAGCATGAACAAACATGGCATAAAGGTGAAGGATT...TGTGCCTTTTCTCTGGTGTAGCCATTCTGATTTGTCAATACTCATTTTTATTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR GCA 90 bp | TATAAGCCTGGCAAACTTCGGTGTTCAGGAATAAAAATGAGTATTGACAAATCAAAACAAAATCAGAACTaGTCCTTGACTGCTATCCAT | + |
|
Preference number: 2 (lower is better) Translates to: YKPGKLRCSGIKMSIDKSKQNQN*SLTAIH Trigger: ATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTT...TGATTTGTCAATACTCATTTTTATTCCTGAACACCGAAGTTTGCCAGGCTTATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGCCCTTCAGAAGTGTATCCATTCGGAGAGGAGGAAGTCAAGGGGAAAATCAATCAGAACTGCTCCTaGACTGCTATCCATCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: CCPSEVYPFGEEEVKGKINQNCS*TAIHQT Trigger: TGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATT...GATTTTCCCCTTGACTTCCTCCTCTCCGAATGGATACACTTCTGAAGGGCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGTCATGCCCCAATCCATCTAATAAAAGAGAGTGAGGCAGGAATAGGAGGCCACAAGGATGCAAAATaGACCTCCTGTGGTTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: SSHAPIHLIKESEAGIGGHKDAK*TSCGSS Trigger: AGATGAACCACAGGAGGTCAATTTTGCATCCTTGTG...GCCTCCTATTCCTGCCTCACTCTCTTTTATTAGATGGATTGGGGCATGACTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR TCA 72 bp | ATACACTCTACTCAGGCCCCCTGCAAAGCTGTAGATTaGAATGTCATGTACCACCGAGCTGTGGTTAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: IHSTQAPCKAVD*NVMYHRAVVNR Trigger: TCTGTTAACCACAGCTCGGTGGTACATGACATTTCAATCTACAGCTTTGCAGGGGGCCTGAGTAGAGTGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR GCA 72 bp | GGTCACTTTAAACCATGGATAAGAGGAAGAAAAGGCTaGTGCCCTTCAGAAGTGTATCCATTCGGAGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GHFKPWIRGRKG*CPSEVYPFGEE Trigger: CTCCTCTCCGAATGGATACACTTCTGAAGGGCAGCAGCCTTTTCTTCCTCTTATCCATGGTTTAAAGTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCGGACTGGATCAACGTTaGCAGAGTTCATTTCCTACT | + |
|
Preference number: 3 (lower is better) Translates to: QNLSFHALRSWTSNSKLSGLDQR*QSSFPT Trigger: AGTAGGAAATGAACTCTGCAAACGTTGATCCAGTCC...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR CCA 72 bp | GAAGCACAAAACCTGTCCTTCCATGCCCTGAGATCTTaGACAAGCAATTCTAAGCTTTCCCATTTCTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: EAQNLSFHALRS*TSNSKLSHFSW Trigger: CCAAGAGAAATGGGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTGTGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGTCATGCCCCAATCCATCTAATAAAAGAGAGTGAGGCAGGAATAGGAGGCTCCATTTTTCTCTCTTaGGAAGTTCCCATGGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: SSHAPIHLIKESEAGIGGSIFLS*EVPMVT Trigger: TGTAACCATGGGAACTTCCAAAGAGAGAAAAATGGA...GCCTCCTATTCCTGCCTCACTCTCTTTTATTAGATGGATTGGGGCATGACTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR CCA 72 bp | TCCATCAGACAGATGCTCACCATCATACAGAGGGACTaGATCAACGTTTGCAGAGTTCATTTCCTACTATCT | + |
|
Preference number: 3 (lower is better) Translates to: SIRQMLTIIQRD*INVCRVHFLLS Trigger: AGATAGTAGGAAATGAACTCTGCAAACGTTGATCCAGTCCCTCTGTATGATGGTGAGCATCTGTCTGATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGAGGACTGGATCAACGTTaGCAGAGTTCATTTCCTACT | + |
|
Preference number: 3 (lower is better) Translates to: EQNKTKSELLLDCYPSDRGLDQR*QSSFPT Trigger: AGTAGGAAATGAACTCTGCAAACGTTGATCCAGTCC...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCTTTGAAAATTTTCTATaGGCCCACTTAACCAGCACG | + |
|
Preference number: 3 (lower is better) Translates to: QNLSFHALRSWTSNSKLSFENFL*AHLTST Trigger: CGTGCTGGTTAAGTGGGCCAATAGAAAATTTTCAAA...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCCCTGCAGGAATGTGTTaGCTTGGAATTGTTAAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QNLSFHALRSWTSNSKLSPAGMC*LGIVKK Trigger: CTTTTTAACAATTCCAAGCAAACACATTCCTGCAGG...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCCAGTTAATAATCCACTaGCAGAACAGCTGCTATATG | + |
|
Preference number: 3 (lower is better) Translates to: QNLSFHALRSWTSNSKLSQLIIH*QNSCYM Trigger: CATATAGCAGCTGTTCTGCAAGTGGATTATTAACTG...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGTCATGCCCCAATCCATCTAATAAAAGAGAGTGAGGCAGGAATAGGAGGCAAATCTACAGAGTCCTaGACTCACAAAAGAGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: SSHAPIHLIKESEAGIGGKSTES*THKREF Trigger: GAATTCTCTTTTGTGAGTCAAGGACTCTGTAGATTT...GCCTCCTATTCCTGCCTCACTCTCTTTTATTAGATGGATTGGGGCATGACTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR TCA 72 bp | ACGTCTTTATCATTGAGGGTGACAATTTTCATTGACTaGTCCTTTCTATGGATACACTCTACTCAGGCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: TSLSLRVTIFID*SFLWIHSTQAP Trigger: GGGGGCCTGAGTAGAGTGTATCCATAGAAAGGATCAGTCAATGAAAATTGTCACCCTCAATGATAAAGACGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR GCA 72 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTaGTATCCATCAGACAGATGCTCACCATCATACAGA | + |
|
Preference number: 3 (lower is better) Translates to: EQNKTKSELLLD*YPSDRCSPSYR Trigger: TCTGTATGATGGTGAGCATCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR TCA 72 bp | GCACACGTCTTTATCATTGAGGGTGACAATTTTCATTaGCTGATCCTTTCTATGGATACACTCTACTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AHVFIIEGDNFH*LILSMDTLYSG Trigger: GCCTGAGTAGAGTGTATCCATAGAAAGGATCAGTCAATGAAAATTGTCACCCTCAATGATAAAGACGTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR TCA 72 bp | GCTCCCCCTGCTTTTCTTCCATTCTTCAATTATGTCTaGCTTTCTCTACCATTTAATCAGTGTCTCTTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: APPAFLPFFNYV*LSLPFNQCLFR Trigger: CCTAAAGAGACACTGATTAAATGGTAGAGAAAGTCAGACATAATTGAAGAATGGAAGAAAAGCAGGGGGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR TCA 72 bp | ATAAAAGAGAGTGAGGCAGGAATAGGAGGCCTATACTaGGTATTTGGTGAAAAACTCAGCAAACTTTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: IKESEAGIGGLY*VFGEKLSKLWT Trigger: TGTCCAAAGTTTGCTGAGTTTTTCACCAAATACTCAGTATAGGCCTCCTATTCCTGCCTCACTCTCTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR TCA 72 bp | TATGAGTCAGAGCAGTGTGTTGCTGTAGCCCTAGTCTaGGATCCAATATTTAATTTCCCTTTGATTTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: YESEQCVAVALV*DPIFNFPLIYH Trigger: ATGGTAAATCAAAGGGAAATTAAATATTGGATCTCAGACTAGGGCTACAGCAACACACTGCTCTGACTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGTGGGCTGAGACAGAAGAGCATCTTGCCCCCTCCTCAGCGTGGCGTTTATCCCAGCCAGTCAAACTaGGGAATCATAGCGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSGLRQKSILPPPQRGVYPSQSN*GIIALS Trigger: ACTCAGCGCTATGATTCCCCAGTTTGACTGGCTGGG...ATAAACGCCACGCTGAGGAGGGGGCAAGATGCTCTTCTGTCTCAGCCCACTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR TCA 90 bp | TGCTGCCCTTCAGAAGTGTATCCATTCGGAGAGGAGGAAGTCAAGGGGAAAATCTCTCCAGCATGTCAATaGAGGCCCAGCGAACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: CCPSEVYPFGEEEVKGKISPACQ*RPSEHP Trigger: AGGGTGTTCGCTGGGCCTTCATTGACATGCTGGAGA...GATTTTCCCCTTGACTTCCTCCTCTCCGAATGGATACACTTCTGAAGGGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCCTTCAGAAGTGTATCCATTCGGAGAGGAGGAAGTCAAGGGGAAAATCCTAGAAAGAGCAGTGTaGCCAACACCAGGGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CCPSEVYPFGEEEVKGKILERAV*PTPGCH Trigger: GTGGCACCCTGGTGTTGGGCACACTGCTCTTTCTAG...GATTTTCCCCTTGACTTCCTCCTCTCCGAATGGATACACTTCTGAAGGGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR TCA 90 bp | TTAAGTGGGCTGAGACAGAAGAGCATCTTGCCCCCTCCTCAGCGTGGCGTTTATGATTTACTTTGCTCATaGTGGCAGCAGCGGCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LSGLRQKSILPPPQRGVYDLLCS*WQQRLL Trigger: TAGAAGCCGCTGCTGCCATCATGAGCAAAGTAAATC...ATAAACGCCACGCTGAGGAGGGGGCAAGATGCTCTTCTGTCTCAGCCCACTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR TCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCTGGCCAGCGGAAAGGTaGATGCCTCAAGATGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QNLSFHALRSWTSNSKLSWPAER*MPQDVE Trigger: CTCCACATCTTGAGGCATTCACCTTTCCGCTGGCCA...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CCA 90 bp | TTAAGTGGGCTGAGACAGAAGAGCATCTTGCCCCCTCCTCAGCGTGGCGTTTATATGAGTAGAGGATTTTaGCTTTCTGTACGGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSGLRQKSILPPPQRGVYMSRGF*LSVRLQ Trigger: CTGAAGCCGTACAGAAAGCCAAAATCCTCTACTCAT...ATAAACGCCACGCTGAGGAGGGGGCAAGATGCTCTTCTGTCTCAGCCCACTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCCTTCAGAAGTGTATCCATTCGGAGAGGAGGAAGTCAAGGGGAAAATCGATATGTTCATTGGATaGCTTGTCATCAGGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: CCPSEVYPFGEEEVKGKIDMFIG*LVIRGH Trigger: GTGTCCCCTGATGACAAGGCATCCAATGAACATATC...GATTTTCCCCTTGACTTCCTCCTCTCCGAATGGATACACTTCTGAAGGGCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR GCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCGAGTCGGCAGGAATCTaGACCTCTGTTCATAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QNLSFHALRSWTSNSKLSESAGI*TSVHSG Trigger: TCCACTATGAACAGAGGTGCAGATTCCTGCCGACTC...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGTCATGCCCCAATCCATCTAATAAAAGAGAGTGAGGCAGGAATAGGAGGCTCTAGCCATCTATATTaGAAGCGCCTGCTGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSHAPIHLIKESEAGIGGSSHLY*KRLLRF Trigger: AAACCTCAGCAGGCGCTTTCAATATAGATGGCTAGA...GCCTCCTATTCCTGCCTCACTCTCTTTTATTAGATGGATTGGGGCATGACTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CCA 90 bp | AGCAGTCATGCCCCAATCCATCTAATAAAAGAGAGTGAGGCAGGAATAGGAGGCTTTGCACTTGTTCTCTaGCAGCTTCTGGTCTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSHAPIHLIKESEAGIGGFALVL*QLLVYR Trigger: CCTATAGACCAGAAGCTGCCAGAGAACAAGTGCAAA...GCCTCCTATTCCTGCCTCACTCTCTTTTATTAGATGGATTGGGGCATGACTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| 3UTR CAA 72 bp | GAGTTAACATTAAGTGGGCTGAGACAGAAGAGCATCTaGCCCCCTCCTCAGCGTGGCGTTTATATCATTATG | + |
|
Preference number: 4 (lower is better) Translates to: ELTLSGLRQKSI*PPPQRGVYIIM Trigger: CATAATGATATAAACGCCACGCTGAGGAGGGGGCAAGATGCTCTTCTGTCTCAGCCCACTTAATGTTAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGACAGCAGTGTCCACCATaGATTTGTAAAGGGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: EQNKTKSELLLDCYPSDRQQCPP*ICKGHP Trigger: GGGATGCCCTTTACAAATTCATGGTGGACACTGCTG...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR TCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCAATTGTGGAGGACTGTaGGCACCAATTTGCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QNLSFHALRSWTSNSKLSNCGGL*APICTC Trigger: ACAAGTGCAAATTGGTGCTCACAGTCCTCCACAATT...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR GCA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGACAGCAGCGGCTTCTATaGATTCTGGCTTCAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: EQNKTKSELLLDCYPSDRQQRLL*ILASDS Trigger: ACTGTCTGAAGCCAGAATGCATAGAAGCCGCTGCTG...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR GCA 90 bp | AGCAGTCATGCCCCAATCCATCTAATAAAAGAGAGTGAGGCAGGAATAGGAGGCCAGGAATTGGGTTATTaGTTATCCAGCCATCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSHAPIHLIKESEAGIGGQELGY*LSSHHK Trigger: CTTGTGATGGCTGGATAAGCAATAACCCAATTCCTG...GCCTCCTATTCCTGCCTCACTCTCTTTTATTAGATGGATTGGGGCATGACTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCCTTCAGAAGTGTATCCATTCGGAGAGGAGGAAGTCAAGGGGAAAATCGGTTCGGTTCTCATGTaGAATCATTATCTCAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: CCPSEVYPFGEEEVKGKIGSVLM*NHYLSY Trigger: ATAGCTGAGATAATGATTCCACATGAGAACCGAACC...GATTTTCCCCTTGACTTCCTCCTCTCCGAATGGATACACTTCTGAAGGGCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCATCTTTAAAGTACTGTaGGACGCGGACCACCACATT | + |
|
Preference number: 4 (lower is better) Translates to: QNLSFHALRSWTSNSKLSIFKVL*DADHHI Trigger: AATGTGGTGGTCCGCGTCCCACAGTACTTTAAAGAT...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCAGAGTTGTGGTCCCCTaGATTACCCTTGAGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QNLSFHALRSWTSNSKLSRVVVP*ITLENS Trigger: AGAATTCTCAAGGGTAATCCAGGGGACCACAACTCT...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CCA 90 bp | AGCAGTCATGCCCCAATCCATCTAATAAAAGAGAGTGAGGCAGGAATAGGAGGCATTGACCCTAAATTGTaGAGGACTGTGAGCACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSHAPIHLIKESEAGIGGIDPKL*RTVSTN Trigger: ATTGGTGCTCACAGTCCTCCACAATTTAGGGTCAAT...GCCTCCTATTCCTGCCTCACTCTCTTTTATTAGATGGATTGGGGCATGACTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR TCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCCTCATTCATGCAGGATaGGTAGAGGATTTTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QNLSFHALRSWTSNSKLSLIHAG*VEDFGF Trigger: AAAGCCAAAATCCTCTACTCATCCTGCATGAATGAG...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCCTTCAGAAGTGTATCCATTCGGAGAGGAGGAAGTCAAGGGGAAAATCTTGCTTTCTCATTCATaGAGGATGAGTAGAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: CCPSEVYPFGEEEVKGKILLSHS*RMSRGF Trigger: AAATCCTCTACTCATCCTGCATGAATGAGAAAGCAA...GATTTTCCCCTTGACTTCCTCCTCTCCGAATGGATACACTTCTGAAGGGCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR GCA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGAAGCCAGAGAGAGTGTTaGTTGGTCCAGCTTCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EQNKTKSELLLDCYPSDRSQREC*LVQLQD Trigger: ATCTTGAAGCTGGACCAAGCAACACTCTCTCTGGCT...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCTCAAGATATGTTCATTaGATGCCTTGTCATCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QNLSFHALRSWTSNSKLSSRYVH*MPCHQG Trigger: CCCCTGATGACAAGGCATCCAATGAACATATCTTGA...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCGGCATTGACTGTTGTTaGGTTTGTAAACCACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QNLSFHALRSWTSNSKLSGIDCC*VCKPLC Trigger: ACAGAGTGGTTTACAAACCCAACAACAGTCAATGCC...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| 3UTR CAA 72 bp | CAGCTGAGCAGAACAAAACAAAATCAGAACTGCTCCTaGACTGCTATCCATCAGACAGATGCTCACCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLSRTKQNQNCS*TAIHQTDAHHH Trigger: ATGATGGTGAGCATCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTCAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| CDS-3UTR TCA 90 bp | TATAAGCCTGGCAAACTTCGGTGTTCAGGAATAAAAATGAGTATTGACAAATCATGTCCCGCCTTCGGCTaGCTGATTTCTCCAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YKPGKLRCSGIKMSIDKSCPAFG*LISPEV Trigger: CACTTCTGGAGAAATCAGTCAGCCGAAGGCGGGACA...TGATTTGTCAATACTCATTTTTATTCCTGAACACCGAAGTTTGCCAGGCTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR TCA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGAATTGAAAGCGCCTGCTaGGGTTTGGAATTCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: EQNKTKSELLLDCYPSDRIESAC*GLEFWN Trigger: ATTCCAGAATTCCAAACCTCAGCAGGCGCTTTCAAT...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR TCA 90 bp | AGCAGTCATGCCCCAATCCATCTAATAAAAGAGAGTGAGGCAGGAATAGGAGGCTTATCCTCCTGGAAGTaGACATTCACAAACATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSHAPIHLIKESEAGIGGLSSWK*TFTNIF Trigger: GAAAATGTTTGTGAATGTTCACTTCCAGGAGGATAA...GCCTCCTATTCCTGCCTCACTCTCTTTTATTAGATGGATTGGGGCATGACTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR GCA 90 bp | AGCAGTCATGCCCCAATCCATCTAATAAAAGAGAGTGAGGCAGGAATAGGAGGCTTTCCTTTTTGTCCCTaGATCCATCCATTCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSHAPIHLIKESEAGIGGFPFCP*IHPFIF Trigger: GAAAATGAATGGATGGATGCAGGGACAAAAAGGAAA...GCCTCCTATTCCTGCCTCACTCTCTTTTATTAGATGGATTGGGGCATGACTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR GCA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGAACTGTGCTAAATACTTaGGGGTTTGCAGTACGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EQNKTKSELLLDCYPSDRTVLNT*GFAVRC Trigger: GCAACGTACTGCAAACCCGCAAGTATTTAGCACAGT...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR GCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCTATCTGGTTGGTAGATaGACTGTAAAAGGCATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QNLSFHALRSWTSNSKLSYLVGR*TVKGID Trigger: GTCAATGCCTTTTACAGTGCATCTACCAACCAGATA...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR GCA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGACAAAAGAAAGGCTTCTaGAGCTCTCCAGCAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: EQNKTKSELLLDCYPSDRQKKGF*SSPAGN Trigger: ATTTCCTGCTGGAGAGCTGCAGAAGCCTTTCTTTTG...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR TCA 90 bp | GGAATAAAAATGAGTATTGACAAATCAGAATGGCTACACCAGAGAAAAGGCACAACAGAATTGCTGTATTaGCCGCGGAACGTTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GIKMSIDKSEWLHQRKGTTELLY*PRNVAS Trigger: ACTGGCAACGTTCCGCGGTCAATACAGCAATTCTGT...TGTGCCTTTTCTCTGGTGTAGCCATTCTGATTTGTCAATACTCATTTTTATTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR GCA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGATGCCAAAACAGCTCTTaGCTTTTCTTGAGCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EQNKTKSELLLDCYPSDRCQNSS*LFLSFP Trigger: AGGAAAGCTCAAGAAAAGGCAAGAGCTGTTTTGGCA...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| 3UTR CAA 72 bp | GATGCTCACCATCATACAGAGGGACTGGATCAACGTTaGCAGAGTTCATTTCCTACTATCTTTATTGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DAHHHTEGLDQR*QSSFPTIFIVV Trigger: CACAACAATAAAGATAGTAGGAAATGAACTCTGCAAACGTTGATCCAGTCCCTCTGTATGATGGTGAGCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| 3UTR CAA 72 bp | AGAAAAACTCCTTCAAATGCCCAGTTAATAATCCACTaGCAGAACAGCTGCTATATGAGTCAGAGCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKTPSNAQLIIH*QNSCYMSQSSV Trigger: CACACTGCTCTGACTCATATAGCAGCTGTTCTGCAAGTGGATTATTAACTGGGCATTTGAAGGAGTTTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| CDS-3UTR GCA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCATCTGCTTTTTCAATTaGTTTCTCATTCATGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QNLSFHALRSWTSNSKLSICFFN*FLIHAG Trigger: TCCTGCATGAATGAGAAAGCAATTGAAAAAGCAGAT...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR GCA 90 bp | TATAAGCCTGGCAAACTTCGGTGTTCAGGAATAAAAATGAGTATTGACAAATCACAGCGGAAAGGTGAATaGCTCAAGATGTGGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YKPGKLRCSGIKMSIDKSQRKGE*LKMWSS Trigger: ACTGCTCCACATCTTGAGGCATTCACCTTTCCGCTG...TGATTTGTCAATACTCATTTTTATTCCTGAACACCGAAGTTTGCCAGGCTTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR GCA 90 bp | TATAAGCCTGGCAAACTTCGGTGTTCAGGAATAAAAATGAGTATTGACAAATCAGAGTCGGCAGGAATCTaGACCTCTGTTCATAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YKPGKLRCSGIKMSIDKSESAGI*TSVHSG Trigger: TCCACTATGAACAGAGGTGCAGATTCCTGCCGACTC...TGATTTGTCAATACTCATTTTTATTCCTGAACACCGAAGTTTGCCAGGCTTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000135713.8 |
||
| CDS-3UTR CCA 90 bp | GGAATAAAAATGAGTATTGACAAATCAGAATGGCTACACCAGAGAAAAGGCACAGGCTTCTATGCATTCTaGCTTCAGACAGTACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GIKMSIDKSEWLHQRKGTGFYAF*LQTVLL Trigger: CAGGAGTACTGTCTGAAGCCAGAATGCATAGAAGCC...TGTGCCTTTTCTCTGGTGTAGCCATTCTGATTTGTCAATACTCATTTTTATTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CCA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGACTAAATAATTGGCAATaGTTTTCTTCCTCTCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EQNKTKSELLLDCYPSDRLNNWQ*FSSSRH Trigger: GTGCCGAGAGGAAGAAAACCATTGCCAATTATTTAG...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR TCA 90 bp | TATAAGCCTGGCAAACTTCGGTGTTCAGGAATAAAAATGAGTATTGACAAATCAACTGAATTTTCTCTCTaGCCAAACCCCTTCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: YKPGKLRCSGIKMSIDKSTEFSL*PNPFRT Trigger: GGTCCTGAAGGGGTTTGGTCAGAGAGAAAATTCAGT...TGATTTGTCAATACTCATTTTTATTCCTGAACACCGAAGTTTGCCAGGCTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR TCA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGAACACATACAAACGGATaGACACAGAATTGCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: EQNKTKSELLLDCYPSDRTHTNG*TQNCCI Trigger: AATACAGCAATTCTGTGTTCATCCGTTTGTATGTGT...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR TCA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGACATAGCGCTGAGTTCTaGGATGTTCATTTTGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: EQNKTKSELLLDCYPSDRHSAEF*DVHFVI Trigger: TATAACAAAATGAACATCTCAGAACTCAGCGCTATG...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CCA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGAAATGTCTTTCAAGTGTaGGTAGAGTCTGGTATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: EQNKTKSELLLDCYPSDRNVFQV*VESGIN Trigger: ATTGATACCAGACTCTACCCACACTTGAAAGACATT...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR TCA 90 bp | TATAAGCCTGGCAAACTTCGGTGTTCAGGAATAAAAATGAGTATTGACAAATCAGAAGTGCCTTCAACTTaGGGTCAACATTGTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YKPGKLRCSGIKMSIDKSEVPST*GQHCVS Trigger: TGAGACACAATGTTGACCTCAAGTTGAAGGCACTTC...TGATTTGTCAATACTCATTTTTATTCCTGAACACCGAAGTTTGCCAGGCTTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR TCA 90 bp | TATAAGCCTGGCAAACTTCGGTGTTCAGGAATAAAAATGAGTATTGACAAATCACTTAAACTTTTCTTCTaGTTCCACAGACCACCACGG | + |
|
Preference number: 4 (lower is better) Translates to: YKPGKLRCSGIKMSIDKSLKLFF*FHRPPR Trigger: CCGTGGTGGTCTGTGGAATCAGAAGAAAAGTTTAAG...TGATTTGTCAATACTCATTTTTATTCCTGAACACCGAAGTTTGCCAGGCTTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR TCA 90 bp | TATAAGCCTGGCAAACTTCGGTGTTCAGGAATAAAAATGAGTATTGACAAATCACTCAGGAAGAAGAGCTaGTTGTTGGTGAATGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: YKPGKLRCSGIKMSIDKSLRKKS*LLVNVM Trigger: CATCACATTCACCAACAATCAGCTCTTCTTCCTGAG...TGATTTGTCAATACTCATTTTTATTCCTGAACACCGAAGTTTGCCAGGCTTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CCA 90 bp | GGAATAAAAATGAGTATTGACAAATCAGAATGGCTACACCAGAGAAAAGGCACAAGAGAGAGTGTTGCTTaGTCCAGCTTCAAGATATGT | + |
|
Preference number: 4 (lower is better) Translates to: GIKMSIDKSEWLHQRKGTRESVA*SSFKIC Trigger: ACATATCTTGAAGCTGGACCAAGCAACACTCTCTCT...TGTGCCTTTTCTCTGGTGTAGCCATTCTGATTTGTCAATACTCATTTTTATTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CCA 90 bp | TATAAGCCTGGCAAACTTCGGTGTTCAGGAATAAAAATGAGTATTGACAAATCAGCGCCTGCTGAGGTTTaGAATTCTGGAATAAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: YKPGKLRCSGIKMSIDKSAPAEV*NSGINH Trigger: ATGGTTTATTCCAGAATTCCAAACCTCAGCAGGCGC...TGATTTGTCAATACTCATTTTTATTCCTGAACACCGAAGTTTGCCAGGCTTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR GCA 90 bp | TATAAGCCTGGCAAACTTCGGTGTTCAGGAATAAAAATGAGTATTGACAAATCAAACGTTGCCAGTGTTTaGAGTAGACTGAATTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YKPGKLRCSGIKMSIDKSNVASV*SRLNFL Trigger: GAGAAAATTCAGTCTACTGCAAACACTGGCAACGTT...TGATTTGTCAATACTCATTTTTATTCCTGAACACCGAAGTTTGCCAGGCTTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CCA 90 bp | GGAATAAAAATGAGTATTGACAAATCAGAATGGCTACACCAGAGAAAAGGCACATCCACACTAAATAATTaGCAATGGTTTTCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GIKMSIDKSEWLHQRKGTSTLNN*QWFSSS Trigger: AGAGGAAGAAAACCATTGCCAATTATTTAGTGTGGA...TGTGCCTTTTCTCTGGTGTAGCCATTCTGATTTGTCAATACTCATTTTTATTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CCA 90 bp | TATAAGCCTGGCAAACTTCGGTGTTCAGGAATAAAAATGAGTATTGACAAATCACCATGTGTAAATTCATaGCCCACAATTACTCCTATA | + |
|
Preference number: 4 (lower is better) Translates to: YKPGKLRCSGIKMSIDKSPCVNS*PTITPI Trigger: TATAGGAGTAATTGTGGGCCATGAATTTACACATGG...TGATTTGTCAATACTCATTTTTATTCCTGAACACCGAAGTTTGCCAGGCTTATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS GCA 90 bp | GAGCAGTGTGCCCAACACCAGGGTGCCACCAATAAACAGGGCCAGTaGAATCCGAATGCCTCGGTTGGTCCCCTTTCCAGTCTCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: EQCAQHQGATNKQGQ*NPNASVGPLSSLHG Trigger: ACCATGGAGACTGGAAAGGGGACCAACCGAGGCATTCGGATTGCACTGGCCCTGTTTATTGGTGGCACCCTGGTGTTGGGCACACTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS-3UTR CAA 90 bp | TTAAGTGGGCTGAGACAGAAGAGCATCTTGCCCCCTCCTCAGCGTGGCGTTTATACTGAGGCAGCAGAGTaGTGGTCCCCTGGATTACCC | + |
|
Preference number: 5 (lower is better) Translates to: LSGLRQKSILPPPQRGVYTEAAE*WSPGLP Trigger: GGGTAATCCAGGGGACCACAACTCTGCTGCCTCAGT...ATAAACGCCACGCTGAGGAGGGGGCAAGATGCTCTTCTGTCTCAGCCCACTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS CCA 90 bp | GACGCGGACCACCACATTCTCCGAGGGACCAATGTCTTTCAAGTGTaGGTAGAGTCTGGTATCAATGACCTTCTTGATATAGCCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DADHHILRGTNVFQV*VESGINDLLDIAQP Trigger: TGGCTGGGCTATATCAAGAAGGTCATTGATACCAGACTCTACCCACACTTGAAAGACATTGGTCCCTCGGAGAATGTGGTGGTCCGCGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS-3UTR CAA 90 bp | TGCTGCCCTTCAGAAGTGTATCCATTCGGAGAGGAGGAAGTCAAGGGGAAAATCATTGACCGCGGAACGTaGCCAGTGTTTGCAGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CCPSEVYPFGEEEVKGKIIDRGT*PVFAVD Trigger: GTCTACTGCAAACACTGGCAACGTTCCGCGGTCAAT...GATTTTCCCCTTGACTTCCTCCTCTCCGAATGGATACACTTCTGAAGGGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CAA 90 bp | TTAAGTGGGCTGAGACAGAAGAGCATCTTGCCCCCTCCTCAGCGTGGCGTTTATAGAAGTGCCTTCAACTaGAGGTCAACATTGTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSGLRQKSILPPPQRGVYRSAFN*RSTLCL Trigger: GAGACACAATGTTGACCTCAAGTTGAAGGCACTTCT...ATAAACGCCACGCTGAGGAGGGGGCAAGATGCTCTTCTGTCTCAGCCCACTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CAA 90 bp | TTAAGTGGGCTGAGACAGAAGAGCATCTTGCCCCCTCCTCAGCGTGGCGTTTATTTGCCAAAACAGCTCTaGCCTTTTCTTGAGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSGLRQKSILPPPQRGVYLPKQL*PFLELS Trigger: GGAAAGCTCAAGAAAAGGCAAGAGCTGTTTTGGCAA...ATAAACGCCACGCTGAGGAGGGGGCAAGATGCTCTTCTGTCTCAGCCCACTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CAA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCCACAGAATTGCTGTATaGACCGCGGAACGTTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QNLSFHALRSWTSNSKLSHRIAV*TAERCQ Trigger: CTGGCAACGTTCCGCGGTCAATACAGCAATTCTGTG...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS GCA 90 bp | TCAGGACCAATATTAGCTTCAAGCACTGGCCAGCGGAAAGGTGAATaGCTCAAGATGTGGAGCAGTGGCTTGGCATCTGCTTTTTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: SGPILASSTGQRKGE*LKMWSSGLASAFSI Trigger: AATTGAAAAAGCAGATGCCAAGCCACTGCTCCACATCTTGAGGCATTCACCTTTCCGCTGGCCAGTGCTTGAAGCTAATATTGGTCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS CCA 90 bp | TTAGCTTCAAGCACTGGCCAGCGGAAAGGTGAATGCCTCAAGATGTaGAGCAGTGGCTTGGCATCTGCTTTTTCAATTGCTTTCTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LASSTGQRKGECLKM*SSGLASAFSIAFSF Trigger: GAATGAGAAAGCAATTGAAAAAGCAGATGCCAAGCCACTGCTCCACATCTTGAGGCATTCACCTTTCCGCTGGCCAGTGCTTGAAGCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS-3UTR CAA 90 bp | TGCTGCCCTTCAGAAGTGTATCCATTCGGAGAGGAGGAAGTCAAGGGGAAAATCAGCTCTTGCCTTTTCTaGAGCTTTCCTTTTTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CCPSEVYPFGEEEVKGKISSCLF*SFPFCP Trigger: GGGACAAAAAGGAAAGCTCAAGAAAAGGCAAGAGCT...GATTTTCCCCTTGACTTCCTCCTCTCCGAATGGATACACTTCTGAAGGGCAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS GCA 90 bp | AGGCTTCTGCAGCTCTCCAGCAGGAAATCGTATCTGGTTGGTAGATaGACTGTAAAAGGCATTGACTGTTGTTGGGTTTGTAAACCACTC | + |
|
Preference number: 5 (lower is better) Translates to: RLLQLSSRKSYLVGR*TVKGIDCCWVCKPL Trigger: GAGTGGTTTACAAACCCAACAACAGTCAATGCCTTTTACAGTGCATCTACCAACCAGATACGATTTCCTGCTGGAGAGCTGCAGAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CAA 90 bp | TGCTGCCCTTCAGAAGTGTATCCATTCGGAGAGGAGGAAGTCAAGGGGAAAATCTTCAAGATATGTTCATaGGATGCCTTGTCATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CCPSEVYPFGEEEVKGKIFKICS*DALSSG Trigger: CCCTGATGACAAGGCATCCAATGAACATATCTTGAA...GATTTTCCCCTTGACTTCCTCCTCTCCGAATGGATACACTTCTGAAGGGCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CAA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCCAGAGAGAGTGTTGCTaGGTCCAGCTTCAAGATATG | + |
|
Preference number: 5 (lower is better) Translates to: QNLSFHALRSWTSNSKLSQRECC*VQLQDM Trigger: CATATCTTGAAGCTGGACCAAGCAACACTCTCTCTG...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS TCA 90 bp | TCATCAGGGGACACATACAAACGGATGAACACAGAATTGCTGTATTaGCCGCGGAACGTTGCCAGTGTTTGCAGTAGACTGAATTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSGDTYKRMNTELLY*PRNVASVCSRLNFL Trigger: GAGAAAATTCAGTCTACTGCAAACACTGGCAACGTTCCGCGGTCAATACAGCAATTCTGTGTTCATCCGTTTGTATGTGTCCCCTGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS TCA 90 bp | TATGTTCATTGGATGCCTTGTCATCAGGGGACACATACAAACGGATaGACACAGAATTGCTGTATTGACCGCGGAACGTTGCCAGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: YVHWMPCHQGTHTNG*TQNCCIDRGTLPVF Trigger: AAACACTGGCAACGTTCCGCGGTCAATACAGCAATTCTGTGTTCATCCGTTTGTATGTGTCCCCTGATGACAAGGCATCCAATGAACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS TCA 90 bp | GATATAGCCCAGCCAGTCAAACTGGGGAATCATAGCGCTGAGTTCTaGGATGTTCATTTTGTTATACATAGCCTCACTGGTTCGGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: DIAQPVKLGNHSAEF*DVHFVIHSLTGSVL Trigger: GAGAACCGAACCAGTGAGGCTATGTATAACAAAATGAACATCTCAGAACTCAGCGCTATGATTCCCCAGTTTGACTGGCTGGGCTATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS-3UTR CAA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGAACCATTGACCCTAAATaGTGGAGGACTGTGAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: EQNKTKSELLLDCYPSDRTIDPK*WRTVST Trigger: GGTGCTCACAGTCCTCCACAATTTAGGGTCAATGGT...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS TCA 90 bp | TTGTCCCTGCATCCATCCATTCATTTTCTTTCTCCAGCATGTCAATaGAGGCCCAGCGAACACCCTCAATCAATTCTTCCATCATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLHPSIHFLSPACQ*RPSEHPQSILPSFP Trigger: AGGAAATGATGGAAGAATTGATTGAGGGTGTTCGCTGGGCCTTCATTGACATGCTGGAGAAAGAAAATGAATGGATGGATGCAGGGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS GCA 90 bp | CTGGAAGTGAACATTCACAAACATTTTCCCCACAACATATGGGAGTaGACTCTCAATAAAGTTGACACATTTGTCCCACTGAGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LEVNIHKHFPHNIWE*TLNKVDTFVPLRQQ Trigger: CTGCTGCCTCAGTGGGACAAATGTGTCAACTTTATTGAGAGTGCACTCCCATATGTTGTGGGGAAAATGTTTGTGAATGTTCACTTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS-3UTR CAA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCGCATATCTTCAGGAATaGGGTTATTGCTTATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QNLSFHALRSWTSNSKLSAYLQE*GYCLSS Trigger: GCTGGATAAGCAATAACCCAATTCCTGAAGATATGC...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CAA 90 bp | CAAAACCTGTCCTTCCATGCCCTGAGATCTTGGACAAGCAATTCTAAGCTTTCCGATAAACCCCATAGCTaGGCATATCTTCAGGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: QNLSFHALRSWTSNSKLSDKPHS*AYLQEL Trigger: CAATTCCTGAAGATATGCCAAGCTATGGGGTTTATC...GGAAAGCTTAGAATTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CAA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGATGTTCATTGGATGCCTaGTCATCAGGGGACACATAC | + |
|
Preference number: 5 (lower is better) Translates to: EQNKTKSELLLDCYPSDRCSLDA*SSGDTY Trigger: GTATGTGTCCCCTGATGACAAGGCATCCAATGAACA...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CAA 90 bp | TGCTGCCCTTCAGAAGTGTATCCATTCGGAGAGGAGGAAGTCAAGGGGAAAATCTCTGAGATGTTCATTTaGTTATACATAGCCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: CCPSEVYPFGEEEVKGKISEMFI*LYIASL Trigger: CAGTGAGGCTATGTATAACAAAATGAACATCTCAGA...GATTTTCCCCTTGACTTCCTCCTCTCCGAATGGATACACTTCTGAAGGGCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CAA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGAGACTGTGCTAAATACTaGCGGGTTTGCAGTACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EQNKTKSELLLDCYPSDRDCAKY*RVCSTL Trigger: CAACGTACTGCAAACCCGCAAGTATTTAGCACAGTC...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS CCA 90 bp | ATCCTCCTGGAAGTGAACATTCACAAACATTTTCCCCACAACATATaGGAGTGCACTCTCAATAAAGTTGACACATTTGTCCCACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ILLEVNIHKHFPHNI*ECTLNKVDTFVPLR Trigger: CCTCAGTGGGACAAATGTGTCAACTTTATTGAGAGTGCACTCCCATATGTTGTGGGGAAAATGTTTGTGAATGTTCACTTCCAGGAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS-3UTR CAA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGATCCCCTGGATTACCCTaGAGAATTCTAGCCATCTAT | + |
|
Preference number: 5 (lower is better) Translates to: EQNKTKSELLLDCYPSDRSPGLP*RILAIY Trigger: ATAGATGGCTAGAATTCTCAAGGGTAATCCAGGGGA...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CAA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGATCAGGAATTGGGTTATaGCTTATCCAGCCATCACAA | + |
|
Preference number: 5 (lower is better) Translates to: EQNKTKSELLLDCYPSDRSGIGL*LIQPSQ Trigger: TTGTGATGGCTGGATAAGCAATAACCCAATTCCTGA...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CAA 90 bp | GGAATAAAAATGAGTATTGACAAATCAGAATGGCTACACCAGAGAAAAGGCACAACTGTGAGCACCAATTaGCACTTGTTCTCTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GIKMSIDKSEWLHQRKGTTVSTN*HLFSGS Trigger: GCTGCCAGAGAACAAGTGCAAATTGGTGCTCACAGT...TGTGCCTTTTCTCTGGTGTAGCCATTCTGATTTGTCAATACTCATTTTTATTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CAA 90 bp | GAGCAGAACAAAACAAAATCAGAACTGCTCCTTGACTGCTATCCATCAGACAGATCCGATTCTGAAAATTaGATTGCCTTGAGGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: EQNKTKSELLLDCYPSDRSDSEN*IALRSS Trigger: TGAAGACCTCAAGGCAATCAAATTTTCAGAATCGGA...TCTGTCTGATGGATAGCAGTCAAGGAGCAGTTCTGATTTTGTTTTGTTCTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CAA 90 bp | TATAAGCCTGGCAAACTTCGGTGTTCAGGAATAAAAATGAGTATTGACAAATCAAGCACCAATTTGCACTaGTTCTCTGGCAGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: YKPGKLRCSGIKMSIDKSSTNLH*FSGSFW Trigger: CCAGAAGCTGCCAGAGAACAAGTGCAAATTGGTGCT...TGATTTGTCAATACTCATTTTTATTCCTGAACACCGAAGTTTGCCAGGCTTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CAA 90 bp | GGAATAAAAATGAGTATTGACAAATCAGAATGGCTACACCAGAGAAAAGGCACAACAGAAAGATTTACTTaGCTCATGATGGCAGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GIKMSIDKSEWLHQRKGTTERFT*LMMAAA Trigger: CGCTGCTGCCATCATGAGCAAAGTAAATCTTTCTGT...TGTGCCTTTTCTCTGGTGTAGCCATTCTGATTTGTCAATACTCATTTTTATTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS-3UTR CAA 90 bp | TATAAGCCTGGCAAACTTCGGTGTTCAGGAATAAAAATGAGTATTGACAAATCACTGGATAGCCAACTTTaGCCAAAACAGCTCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: YKPGKLRCSGIKMSIDKSLDSQL*PKQLLP Trigger: AGGCAAGAGCTGTTTTGGCAAAAGTTGGCTATCCAG...TGATTTGTCAATACTCATTTTTATTCCTGAACACCGAAGTTTGCCAGGCTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS GCA 72 bp | GCCCAACACCAGGGTGCCACCAATAAACAGGGCCAGTaGAATCCGAATGCCTCGGTTGGTCCCCTTTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AQHQGATNKQGQ*NPNASVGPLSS Trigger: ACTGGAAAGGGGACCAACCGAGGCATTCGGATTGCACTGGCCCTGTTTATTGGTGGCACCCTGGTGTTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS CAA 72 bp | CCAATAAACAGGGCCAGTGCAATCCGAATGCCTCGGTaGGTCCCCTTTCCAGTCTCCATGGTGCTCCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PINRASAIRMPR*VPFPVSMVLPV Trigger: AACAGGGAGCACCATGGAGACTGGAAAGGGGACCAACCGAGGCATTCGGATTGCACTGGCCCTGTTTATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS CCA 72 bp | TTGCTTTCTCATTCATGCAGGATGAGTAGAGGATTTTaGCTTTCTGTACGGCTTCAGTGTCCCGCCTTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLSHSCRMSRGF*LSVRLQCPAFG Trigger: GCCGAAGGCGGGACACTGAAGCCGTACAGAAAGCCAAAATCCTCTACTCATCCTGCATGAATGAGAAAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS CAA 90 bp | ACTGGCCAGCGGAAAGGTGAATGCCTCAAGATGTGGAGCAGTGGCTaGGCATCTGCTTTTTCAATTGCTTTCTCATTCATGCAGGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: TGQRKGECLKMWSSG*ASAFSIAFSFMQDE Trigger: CTCATCCTGCATGAATGAGAAAGCAATTGAAAAAGCAGATGCCAAGCCACTGCTCCACATCTTGAGGCATTCACCTTTCCGCTGGCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS TCA 72 bp | TGGATGCCTTGTCATCAGGGGACACATACAAACGGATaGACACAGAATTGCTGTATTGACCGCGGAACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WMPCHQGTHTNG*TQNCCIDRGTL Trigger: CAACGTTCCGCGGTCAATACAGCAATTCTGTGTTCATCCGTTTGTATGTGTCCCCTGATGACAAGGCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS GCA 72 bp | GATCGAGGGTATTCTGTTCCCCAAAAGAAAGGCTTCTaGAGCTCTCCAGCAGGAAATCGTATCTGGTTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: DRGYSVPQKKGF*SSPAGNRIWLV Trigger: TACCAACCAGATACGATTTCCTGCTGGAGAGCTGCAGAAGCCTTTCTTTTGGGGAACAGAATACCCTCGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS CAA 90 bp | AATGGCACCATTGACCCTAAATTGTGGAGGACTGTGAGCACCAATTaGCACTTGTTCTCTGGCAGCTTCTGGTCTATAGGAATTGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: NGTIDPKLWRTVSTN*HLFSGSFWSIGIAP Trigger: AGGTGCAATTCCTATAGACCAGAAGCTGCCAGAGAACAAGTGCAAATTGGTGCTCACAGTCCTCCACAATTTAGGGTCAATGGTGCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS TCA 72 bp | GACACATACAAACGGATGAACACAGAATTGCTGTATTaGCCGCGGAACGTTGCCAGTGTTTGCAGTAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: DTYKRMNTELLY*PRNVASVCSRL Trigger: CAGTCTACTGCAAACACTGGCAACGTTCCGCGGTCAATACAGCAATTCTGTGTTCATCCGTTTGTATGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS TCA 72 bp | CTAATGGCACCATTGACCCTAAATTGTGGAGGACTGTaGGCACCAATTTGCACTTGTTCTCTGGCAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LMAPLTLNCGGL*APICTCSLAAS Trigger: AGAAGCTGCCAGAGAACAAGTGCAAATTGGTGCTCACAGTCCTCCACAATTTAGGGTCAATGGTGCCATTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS GCA 72 bp | ATCCAGGAAGTCTTCCCTTACAGCCAGAGAGAGTGTTaGTTGGTCCAGCTTCAAGATATGTTCATTGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: IQEVFPYSQREC*LVQLQDMFIGC Trigger: GCATCCAATGAACATATCTTGAAGCTGGACCAAGCAACACTCTCTCTGGCTGTAAGGGAAGACTTCCTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS CCA 72 bp | TTTGCTCATGATGGCAGCAGCGGCTTCTATGCATTCTaGCTTCAGACAGTACTCCTGTTTAGCTTGGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: FAHDGSSGFYAF*LQTVLLFSLET Trigger: AGTTTCCAAGCTAAACAGGAGTACTGTCTGAAGCCAGAATGCATAGAAGCCGCTGCTGCCATCATGAGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS CCA 72 bp | GTGGAGGACTGTGAGCACCAATTTGCACTTGTTCTCTaGCAGCTTCTGGTCTATAGGAATTGCACCTTACAT | + |
|
Preference number: 6 (lower is better) Translates to: VEDCEHQFALVL*QLLVYRNCTLH Trigger: ATGTAAGGTGCAATTCCTATAGACCAGAAGCTGCCAGAGAACAAGTGCAAATTGGTGCTCACAGTCCTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS CAA 90 bp | ACCATTGACCCTAAATTGTGGAGGACTGTGAGCACCAATTTGCACTaGTTCTCTGGCAGCTTCTGGTCTATAGGAATTGCACCTTACATG | + |
|
Preference number: 6 (lower is better) Translates to: TIDPKLWRTVSTNLH*FSGSFWSIGIAPYM Trigger: CATGTAAGGTGCAATTCCTATAGACCAGAAGCTGCCAGAGAACAAGTGCAAATTGGTGCTCACAGTCCTCCACAATTTAGGGTCAATGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS TCA 72 bp | TCTCACAAGGATCCACAGAAAGATTTACTTTGCTCATaGTGGCAGCAGCGGCTTCTATGCATTCTGGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SHKDPQKDLLCS*WQQRLLCILAS Trigger: TGAAGCCAGAATGCATAGAAGCCGCTGCTGCCATCATGAGCAAAGTAAATCTTTCTGTGGATCCTTGTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS CAA 72 bp | CGGAAAGGTGAATGCCTCAAGATGTGGAGCAGTGGCTaGGCATCTGCTTTTTCAATTGCTTTCTCATTCATG | + |
|
Preference number: 6 (lower is better) Translates to: RKGECLKMWSSG*ASAFSIAFSFM Trigger: CATGAATGAGAAAGCAATTGAAAAAGCAGATGCCAAGCCACTGCTCCACATCTTGAGGCATTCACCTTTCCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS CAA 72 bp | TATCCAGGAAGTCTTCCCTTACAGCCAGAGAGAGTGTaGCTTGGTCCAGCTTCAAGATATGTTCATTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: YPGSLPLQPERV*LGPASRYVHWM Trigger: CATCCAATGAACATATCTTGAAGCTGGACCAAGCAACACTCTCTCTGGCTGTAAGGGAAGACTTCCTGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS CAA 72 bp | ATTGACCCTAAATTGTGGAGGACTGTGAGCACCAATTaGCACTTGTTCTCTGGCAGCTTCTGGTCTATAGGA | + |
|
Preference number: 6 (lower is better) Translates to: IDPKLWRTVSTN*HLFSGSFWSIG Trigger: TCCTATAGACCAGAAGCTGCCAGAGAACAAGTGCAAATTGGTGCTCACAGTCCTCCACAATTTAGGGTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079945.11 |
||
| CDS TCA 72 bp | CAGCCAGTCAAACTGGGGAATCATAGCGCTGAGTTCTaGGATGTTCATTTTGTTATACATAGCCTCACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: QPVKLGNHSAEF*DVHFVIHSLTG Trigger: ACCAGTGAGGCTATGTATAACAAAATGAACATCTCAGAACTCAGCGCTATGATTCCCCAGTTTGACTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS GCA 72 bp | TGTTGCTTGGTCCAGCTTCAAGATATGTTCATTGGATaGCTTGTCATCAGGGGACACATACAAACGGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: CCLVQLQDMFIG*LVIRGHIQTDE Trigger: TTCATCCGTTTGTATGTGTCCCCTGATGACAAGGCATCCAATGAACATATCTTGAAGCTGGACCAAGCAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS CCA 72 bp | CACCACATTCTCCGAGGGACCAATGTCTTTCAAGTGTaGGTAGAGTCTGGTATCAATGACCTTCTTGATATA | + |
|
Preference number: 6 (lower is better) Translates to: HHILRGTNVFQV*VESGINDLLDI Trigger: TATATCAAGAAGGTCATTGATACCAGACTCTACCCACACTTGAAAGACATTGGTCCCTCGGAGAATGTGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS CAA 72 bp | AAGGATAAACCCCATAGCTTGGCATATCTTCAGGAATaGGGTTATTGCTTATCCAGCCATCACAAGCAAACC | + |
|
Preference number: 6 (lower is better) Translates to: KDKPHSLAYLQE*GYCLSSHHKQT Trigger: GGTTTGCTTGTGATGGCTGGATAAGCAATAACCCAATTCCTGAAGATATGCCAAGCTATGGGGTTTATCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS CAA 72 bp | CAACATTGTGTCTCAGCCAAGGATAAACCCCATAGCTaGGCATATCTTCAGGAATTGGGTTATTGCTTATCC | + |
|
Preference number: 6 (lower is better) Translates to: QHCVSAKDKPHS*AYLQELGYCLS Trigger: GGATAAGCAATAACCCAATTCCTGAAGATATGCCAAGCTATGGGGTTTATCCTTGGCTGAGACACAATGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS CAA 90 bp | CAGTCAAACTGGGGAATCATAGCGCTGAGTTCTGAGATGTTCATTTaGTTATACATAGCCTCACTGGTTCGGTTCTCATGTGGAATCATT | + |
|
Preference number: 6 (lower is better) Translates to: QSNWGIIALSSEMFI*LYIASLVRFSCGII Trigger: AATGATTCCACATGAGAACCGAACCAGTGAGGCTATGTATAACAAAATGAACATCTCAGAACTCAGCGCTATGATTCCCCAGTTTGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS TCA 72 bp | GCGGGTTTGCAGTACGTTGCCAAAGTAGTCCGATTCTaGAAATTTGATTGCCTTGAGGTCTTCATTAACATA | + |
|
Preference number: 6 (lower is better) Translates to: AGLQYVAKVVRF*KFDCLEVFINI Trigger: TATGTTAATGAAGACCTCAAGGCAATCAAATTTTCAGAATCGGACTACTTTGGCAACGTACTGCAAACCCGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS GCA 72 bp | AACATTCACAAACATTTTCCCCACAACATATGGGAGTaGACTCTCAATAAAGTTGACACATTTGTCCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: NIHKHFPHNIWE*TLNKVDTFVPL Trigger: CAGTGGGACAAATGTGTCAACTTTATTGAGAGTGCACTCCCATATGTTGTGGGGAAAATGTTTGTGAATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||
| CDS CCA 72 bp | GAAGTGAACATTCACAAACATTTTCCCCACAACATATaGGAGTGCACTCTCAATAAAGTTGACACATTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: EVNIHKHFPHNI*ECTLNKVDTFV Trigger: GACAAATGTGTCAACTTTATTGAGAGTGCACTCCCATATGTTGTGGGGAAAATGTTTGTGAATGTTCACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079945.11 ENSMUST00000138396.3 |
||