Pregenerated sensors for PHETA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049687Ensembl transcript IDs: ENSMUST00000050349.3, ENSMUST00000161178.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGGCAAAATCCAGCCTTTAGGCCTTGTTGGATTTGGGTCAGGCTaGCCCAAGGCCCCAGATAGGGAAAGGAGGGAGGTCAGGAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: GGKIQPLGLVGFGSG*PKAPDRERREVRKS Trigger: ACTCTTCCTGACCTCCCTCCTTTCCCTATCTGGGGCCTTGGGCCAGCCTGACCCAAATCCAACAAGGCCTAAAGGCTGGATTTTGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR GCA 90 bp | CTACAAGTTGCCATGACGACAGGTCAGGTCTTCTATATAAAAGGCTaGCTGCCTCCCTGCGGGCAATGTCCAGCACTATACATGGACAGG | + |
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Preference number: 1 (lower is better) Translates to: LQVAMTTGQVFYIKG*LPPCGQCPALYMDR Trigger: CCTGTCCATGTATAGTGCTGGACATTGCCCGCAGGGAGGCAGGCAGCCTTTTATATAGAAGACCTGACCTGTCGTCATGGCAACTTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR GCA 90 bp | AGCTGGGCGAAGTGGCGCACACCTTTAATCTTACACTACTTGGGATaGAGAGGCAGGAGGATCTCTGTGAGTTCAAATCCAGTAAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: SWAKWRTPLILHYLG*RGRRISVSSNPVSS Trigger: GGAACTTACTGGATTTGAACTCACAGAGATCCTCCTGCCTCTGCATCCCAAGTAGTGTAAGATTAAAGGTGTGCGCCACTTCGCCCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR CCA 90 bp | CTACAACGATGTCAGTCTTCAAGCCACTTCCTGTCACCTCTGGCATaGAGATGCCCAAGACTTCTTGTGTTGGACTTTATGGCTAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: LQRCQSSSHFLSPLA*RCPRLLVLDFMARE Trigger: CTCTCTAGCCATAAAGTCCAACACAAGAAGTCTTGGGCATCTCCATGCCAGAGGTGACAGGAAGTGGCTTGAAGACTGACATCGTTGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR CCA 90 bp | CCAAGCTACAACGATGTCAGTCTTCAAGCCACTTCCTGTCACCTCTaGCATGGAGATGCCCAAGACTTCTTGTGTTGGACTTTATGGCTA | + |
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Preference number: 1 (lower is better) Translates to: PSYNDVSLQATSCHL*HGDAQDFLCWTLWL Trigger: TAGCCATAAAGTCCAACACAAGAAGTCTTGGGCATCTCCATGCCAGAGGTGACAGGAAGTGGCTTGAAGACTGACATCGTTGTAGCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR CCA 90 bp | CACCTCTGGCATGGAGATGCCCAAGACTTCTTGTGTTGGACTTTATaGCTAGAGAGCAGAGCCCCACTTCCTGAATTATATTATCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: HLWHGDAQDFLCWTL*LESRAPLPELYYLP Trigger: GGGAAGATAATATAATTCAGGAAGTGGGGCTCTGCTCTCTAGCCATAAAGTCCAACACAAGAAGTCTTGGGCATCTCCATGCCAGAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR CCA 90 bp | ACTTCCTGTCACCTCTGGCATGGAGATGCCCAAGACTTCTTGTGTTaGACTTTATGGCTAGAGAGCAGAGCCCCACTTCCTGAATTATAT | + |
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Preference number: 1 (lower is better) Translates to: TSCHLWHGDAQDFLC*TLWLESRAPLPELY Trigger: ATATAATTCAGGAAGTGGGGCTCTGCTCTCTAGCCATAAAGTCCAACACAAGAAGTCTTGGGCATCTCCATGCCAGAGGTGACAGGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR TCA 90 bp | CTTCTTGTGTTGGACTTTATGGCTAGAGAGCAGAGCCCCACTTCCTaGATTATATTATCTTCCCATCAACCACCTGGCCTTTCTAGACCT | + |
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Preference number: 1 (lower is better) Translates to: LLVLDFMAREQSPTS*IILSSHQPPGLSRP Trigger: AGGTCTAGAAAGGCCAGGTGGTTGATGGGAAGATAATATAATTCAGGAAGTGGGGCTCTGCTCTCTAGCCATAAAGTCCAACACAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR TCA 90 bp | ACTATACATGGACAGGGCAGCAGCGGGAGAGAGAACAAATCCCTCTTTAGCACCCTGACCCCGGCATCCTaGCCAGCAGGACAGGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: TIHGQGSSGRENKSLFSTLTPAS*PAGQGH Trigger: ATGGCCCTGTCCTGCTGGTCAGGATGCCGGGGTCAG...GGTGCTAAAGAGGGATTTGTTCTCTCTCCCGCTGCTGCCCTGTCCATGTATAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCAAAATCCAGCCTTTAGGCCTTGTTGGATTTGGGTCAGGCTGGCCCAAGGCTCCTACAGAGAGCCCTaGCCAAGCTACAACGATGTC | + |
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Preference number: 2 (lower is better) Translates to: RQNPAFRPCWIWVRLAQGSYREP*PSYNDV Trigger: GACATCGTTGTAGCTTGGGCAGGGCTCTCTGTAGGA...GCCTTGGGCCAGCCTGACCCAAATCCAACAAGGCCTAAAGGCTGGATTTTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCTAAAGAAAAAGATACTTGGAATGACACGGGACAGAGTAGCTATGAGAGCCCTGACCCCGGCATCCTaGCCAGCAGGACAGGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: ELKKKILGMTRDRVAMRALTPAS*PAGQGH Trigger: ATGGCCCTGTCCTGCTGGTCAGGATGCCGGGGTCAG...GGCTCTCATAGCTACTCTGTCCCGTGTCATTCCAAGTATCTTTTTCTTTAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAACATAGCCCTGACCAGAGGAACCATGGAACTCAGTCTCCTGGAGGCAAAATCCTACAGAGAGCCCTaGCCAAGCTACAACGATGTC | + |
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Preference number: 2 (lower is better) Translates to: RNIALTRGTMELSLLEAKSYREP*PSYNDV Trigger: GACATCGTTGTAGCTTGGGCAGGGCTCTCTGTAGGA...TTTTGCCTCCAGGAGACTGAGTTCCATGGTTCCTCTGGTCAGGGCTATGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR GCA 90 bp | GTTACAAGCAGGCTTGAGAAACATAGCCCTGACCAGAGGAACCATGGAACTCAGCCTCTGGCATGGAGATaGCCAAGACTTCTTGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: VTSRLEKHSPDQRNHGTQPLAWR*PRLLVL Trigger: CAACACAAGAAGTCTTGGGCATCTCCATGCCAGAGG...CTGAGTTCCATGGTTCCTCTGGTCAGGGCTATGTTTCTCAAGCCTGCTTGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAACATAGCCCTGACCAGAGGAACCATGGAACTCAGTCTCCTGGAGGCAAAACGAGAGGGGAGGATCTaGAAGCTAGAGAAAGTCTAC | + |
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Preference number: 2 (lower is better) Translates to: RNIALTRGTMELSLLEAKREGRI*KLEKVY Trigger: GTAGACTTTCTCTAGCTTCCAGATCCTCCCCTCTCG...TTTTGCCTCCAGGAGACTGAGTTCCATGGTTCCTCTGGTCAGGGCTATGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAACATAGCCCTGACCAGAGGAACCATGGAACTCAGTCTCCTGGAGGCAAAACTGTCACCTCTGGCATaGAGATGCCCAAGACTTCTT | + |
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Preference number: 2 (lower is better) Translates to: RNIALTRGTMELSLLEAKLSPLA*RCPRLL Trigger: AAGAAGTCTTGGGCATCTCCATGCCAGAGGTGACAG...TTTTGCCTCCAGGAGACTGAGTTCCATGGTTCCTCTGGTCAGGGCTATGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR CAA 90 bp | CCCCAGATAGGGAAAGGAGGGAGGTCAGGAAGAGTCCAATTTTGTTaGGGAACGGTATACATCTCTATTGAGCCACAGCCACTGTCACTA | + |
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Preference number: 2 (lower is better) Translates to: PQIGKGGRSGRVQFC*GTVYISIEPQPLSL Trigger: TAGTGACAGTGGCTGTGGCTCAATAGAGATGTATACCGTTCCCAAACAAAATTGGACTCTTCCTGACCTCCCTCCTTTCCCTATCTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGAGCTAAAGAAAAAGATACTTGGAATGACACGGGACAGAGTAGCTATGAGAGGCTGCCTGCCTCCCTaGGGGCAATGTCCAGCACTA | + |
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Preference number: 2 (lower is better) Translates to: LELKKKILGMTRDRVAMRGCLPP*GQCPAL Trigger: TAGTGCTGGACATTGCCCGCAGGGAGGCAGGCAGCC...TCTCATAGCTACTCTGTCCCGTGTCATTCCAAGTATCTTTTTCTTTAGCTCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAAAGTTAACAAAAAGCTGGGCGAAGTGGCGCACACCTTTAATCTTACACTAGGATTTGGGTCAGGCTaGCCCAAGGCCCCAGATAGG | + |
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Preference number: 2 (lower is better) Translates to: QKVNKKLGEVAHTFNLTLGFGSG*PKAPDR Trigger: CCTATCTGGGGCCTTGGGCCAGCCTGACCCAAATCC...TAGTGTAAGATTAAAGGTGTGCGCCACTTCGCCCAGCTTTTTGTTAACTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCCACTTCCTGAATTATATTATCTTCCCATCAACCACCTGGCCTTTCTAGACCGAGAGGGGAGGATCTaGAAGCTAGAGAAAGTCTAC | + |
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Preference number: 2 (lower is better) Translates to: APLPELYYLPINHLAFLDREGRI*KLEKVY Trigger: GTAGACTTTCTCTAGCTTCCAGATCCTCCCCTCTCG...GTCTAGAAAGGCCAGGTGGTTGATGGGAAGATAATATAATTCAGGAAGTGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCTAAAGAAAAAGATACTTGGAATGACACGGGACAGAGTAGCTATGAGAGCCACTTCCTGTCACCTCTaGCATGGAGATGCCCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: ELKKKILGMTRDRVAMRATSCHL*HGDAQD Trigger: GTCTTGGGCATCTCCATGCCAGAGGTGACAGGAAGT...GGCTCTCATAGCTACTCTGTCCCGTGTCATTCCAAGTATCTTTTTCTTTAGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCAAAATCCAGCCTTTAGGCCTTGTTGGATTTGGGTCAGGCTGGCCCAAGGCAAAGAAAAAGATACTTaGAATGACACGGGACAGAGT | + |
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Preference number: 2 (lower is better) Translates to: RQNPAFRPCWIWVRLAQGKEKDT*NDTGQS Trigger: ACTCTGTCCCGTGTCATTCCAAGTATCTTTTTCTTT...GCCTTGGGCCAGCCTGACCCAAATCCAACAAGGCCTAAAGGCTGGATTTTGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR CAA 90 bp | GGTCAGGAAGAGTCCAATTTTGTTTGGGAACGGTATACATCTCTATaGAGCCACAGCCACTGTCACTACATCTATATAAAGGGGACAGAC | + |
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Preference number: 2 (lower is better) Translates to: GQEESNFVWERYTSL*SHSHCHYIYIKGTD Trigger: GTCTGTCCCCTTTATATAGATGTAGTGACAGTGGCTGTGGCTCAATAGAGATGTATACCGTTCCCAAACAAAATTGGACTCTTCCTGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAAAGTTAACAAAAAGCTGGGCGAAGTGGCGCACACCTTTAATCTTACACTACCTCTGGCATGGAGATaGCCAAGACTTCTTGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: QKVNKKLGEVAHTFNLTLPLAWR*PRLLVL Trigger: CAACACAAGAAGTCTTGGGCATCTCCATGCCAGAGG...TAGTGTAAGATTAAAGGTGTGCGCCACTTCGCCCAGCTTTTTGTTAACTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAAAGTTAACAAAAAGCTGGGCGAAGTGGCGCACACCTTTAATCTTACACTATGTCAAGGATGCTTTTaGACTCCTGATCCTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: QKVNKKLGEVAHTFNLTLCQGCF*TPDPPP Trigger: TGGAGGAGGATCAGGAGTTCAAAAGCATCCTTGACA...TAGTGTAAGATTAAAGGTGTGCGCCACTTCGCCCAGCTTTTTGTTAACTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAAAGTTAACAAAAAGCTGGGCGAAGTGGCGCACACCTTTAATCTTACACTAAGCTCATGGTTTCTGTaGACATTGGTACAATGGGTG | + |
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Preference number: 2 (lower is better) Translates to: QKVNKKLGEVAHTFNLTLSSWFL*TLVQWV Trigger: CACCCATTGTACCAATGTCCACAGAAACCATGAGCT...TAGTGTAAGATTAAAGGTGTGCGCCACTTCGCCCAGCTTTTTGTTAACTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAAAGTTAACAAAAAGCTGGGCGAAGTGGCGCACACCTTTAATCTTACACTACCAAAATTAACTTTCTaGGAGGGTCTCACACATAGC | + |
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Preference number: 2 (lower is better) Translates to: QKVNKKLGEVAHTFNLTLPKLTF*EGLTHS Trigger: GCTATGTGTGAGACCCTCTCAGAAAGTTAATTTTGG...TAGTGTAAGATTAAAGGTGTGCGCCACTTCGCCCAGCTTTTTGTTAACTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR CAA 90 bp | ACCAGCTTTGCAACTCAGGCTCCTGATTCTTCATTTGTAAACACGTaGATTGTAATAACCAAAATTAACTTTCTGAGAGGGTCTCACACA | + |
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Preference number: 2 (lower is better) Translates to: TSFATQAPDSSFVNT*IVITKINFLRGSHT Trigger: TGTGTGAGACCCTCTCAGAAAGTTAATTTTGGTTATTACAATCAACGTGTTTACAAATGAAGAATCAGGAGCCTGAGTTGCAAAGCTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAAAGTTAACAAAAAGCTGGGCGAAGTGGCGCACACCTTTAATCTTACACTAACAATAAATAGCTCATaGTTTCTGTGGACATTGGTA | + |
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Preference number: 2 (lower is better) Translates to: QKVNKKLGEVAHTFNLTLTINSS*FLWTLV Trigger: TACCAATGTCCACAGAAACCATGAGCTATTTATTGT...TAGTGTAAGATTAAAGGTGTGCGCCACTTCGCCCAGCTTTTTGTTAACTTTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR GCA 72 bp | GCCATGACGACAGGTCAGGTCTTCTATATAAAAGGCTaGCTGCCTCCCTGCGGGCAATGTCCAGCACTATAC | + |
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Preference number: 3 (lower is better) Translates to: AMTTGQVFYIKG*LPPCGQCPALY Trigger: GTATAGTGCTGGACATTGCCCGCAGGGAGGCAGGCAGCCTTTTATATAGAAGACCTGACCTGTCGTCATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR TCA 72 bp | AAATATTTAACCCCTGACGTTCTGACCCCGGCATCCTaGCCAGCAGGACAGGGCCATAGCTTAAAGGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: KYLTPDVLTPAS*PAGQGHSLKGS Trigger: AGAGCCCTTTAAGCTATGGCCCTGTCCTGCTGGTCAGGATGCCGGGGTCAGAACGTCAGGGGTTAAATATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR GCA 72 bp | ATAGCTCATGGTTTCTGTGGACATTGGTACAATGGGTaGAGTGGACAGCGGGCTTCCCCTACAGATCTAGGG | + |
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Preference number: 3 (lower is better) Translates to: IAHGFCGHWYNG*SGQRASPTDLG Trigger: CCCTAGATCTGTAGGGGAAGCCCGCTGTCCACTGCACCCATTGTACCAATGTCCACAGAAACCATGAGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR CCA 72 bp | CACCTCTGGCATGGAGATGCCCAAGACTTCTTGTGTTaGACTTTATGGCTAGAGAGCAGAGCCCCACTTCCT | + |
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Preference number: 3 (lower is better) Translates to: HLWHGDAQDFLC*TLWLESRAPLP Trigger: AGGAAGTGGGGCTCTGCTCTCTAGCCATAAAGTCCAACACAAGAAGTCTTGGGCATCTCCATGCCAGAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR TCA 72 bp | AAACTCGCGGTGTTGTCAAGGATGCTTTTGAACTCCTaGTCCTCCTCCACCTCTTTGCTACCAACCGGGGAA | + |
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Preference number: 3 (lower is better) Translates to: KLAVLSRMLLNS*SSSTSLLPTGE Trigger: TTCCCCGGTTGGTAGCAAAGAGGTGGAGGAGGATCAGGAGTTCAAAAGCATCCTTGACAACACCGCGAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR CCA 72 bp | TGGCCTGATGGAGGTCATACCACCAAGCCAGGTTCTTaGACTCAATTGTTAGCCTCAGACACCAGCTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: WPDGGHTTKPGS*TQLLASDTSFA Trigger: TGCAAAGCTGGTGTCTGAGGCTAACAATTGAGTCCAAGAACCTGGCTTGGTGGTATGACCTCCATCAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR GCA 72 bp | ATCCCAGCAGATTGCCATGCTAAGGAGTTCCAGACCTaGGTGGGCTACAAAGACTTGGTCTCCAAAAACCAA | + |
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Preference number: 3 (lower is better) Translates to: IPADCHAKEFQT*VGYKDLVSKNQ Trigger: TTGGTTTTTGGAGACCAAGTCTTTGTAGCCCACGCAGGTCTGGAACTCCTTAGCATGGCAATCTGCTGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR CAA 90 bp | ACTATACATGGACAGGGCAGCAGCGGGAGAGAGAACAAATCCCTCTTTAGCACCCCAAGACTTCTTGTGTaGGACTTTATGGCTAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: TIHGQGSSGRENKSLFSTPRLLV*DFMARE Trigger: CTCTCTAGCCATAAAGTCCAACACAAGAAGTCTTGG...GGTGCTAAAGAGGGATTTGTTCTCTCTCCCGCTGCTGCCCTGTCCATGTATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR CCA 72 bp | TGTCAGTCTTCAAGCCACTTCCTGTCACCTCTGGCATaGAGATGCCCAAGACTTCTTGTGTTGGACTTTATG | + |
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Preference number: 3 (lower is better) Translates to: CQSSSHFLSPLA*RCPRLLVLDFM Trigger: CATAAAGTCCAACACAAGAAGTCTTGGGCATCTCCATGCCAGAGGTGACAGGAAGTGGCTTGAAGACTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR CCA 72 bp | GGAAAGGAGGGAGGTCAGGAAGAGTCCAATTTTGTTTaGGAACGGTATACATCTCTATTGAGCCACAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: GKEGGQEESNFV*ERYTSLLSHSH Trigger: GTGGCTGTGGCTCAATAGAGATGTATACCGTTCCCAAACAAAATTGGACTCTTCCTGACCTCCCTCCTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR CCA 72 bp | CAGCAGATTGCCATGCTAAGGAGTTCCAGACCTGCGTaGGCTACAAAGACTTGGTCTCCAAAAACCAAAACT | + |
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Preference number: 3 (lower is better) Translates to: QQIAMLRSSRPA*ATKTWSPKTKT Trigger: AGTTTTGGTTTTTGGAGACCAAGTCTTTGTAGCCCACGCAGGTCTGGAACTCCTTAGCATGGCAATCTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR GCA 72 bp | AAGTGGCGCACACCTTTAATCTTACACTACTTGGGATaGAGAGGCAGGAGGATCTCTGTGAGTTCAAATCCA | + |
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Preference number: 3 (lower is better) Translates to: KWRTPLILHYLG*RGRRISVSSNP Trigger: TGGATTTGAACTCACAGAGATCCTCCTGCCTCTGCATCCCAAGTAGTGTAAGATTAAAGGTGTGCGCCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAAAGTTAACAAAAAGCTGGGCGAAGTGGCGCACACCTTTAATCTTACACTACCTCAGACACCAGCTTaGCAACTCAGGCTCCTGATT | + |
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Preference number: 3 (lower is better) Translates to: QKVNKKLGEVAHTFNLTLPQTPA*QLRLLI Trigger: AATCAGGAGCCTGAGTTGCAAAGCTGGTGTCTGAGG...TAGTGTAAGATTAAAGGTGTGCGCCACTTCGCCCAGCTTTTTGTTAACTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR TCA 72 bp | TTGGACTTTATGGCTAGAGAGCAGAGCCCCACTTCCTaGATTATATTATCTTCCCATCAACCACCTGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: LDFMAREQSPTS*IILSSHQPPGL Trigger: AAGGCCAGGTGGTTGATGGGAAGATAATATAATTCAGGAAGTGGGGCTCTGCTCTCTAGCCATAAAGTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAAAGTTAACAAAAAGCTGGGCGAAGTGGCGCACACCTTTAATCTTACACTACGGTATACATCTCTATaGAGCCACAGCCACTGTCAC | + |
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Preference number: 3 (lower is better) Translates to: QKVNKKLGEVAHTFNLTLRYTSL*SHSHCH Trigger: GTGACAGTGGCTGTGGCTCAATAGAGATGTATACCG...TAGTGTAAGATTAAAGGTGTGCGCCACTTCGCCCAGCTTTTTGTTAACTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAAAGTTAACAAAAAGCTGGGCGAAGTGGCGCACACCTTTAATCTTACACTAGTGGGCTACAAAGACTaGGTCTCCAAAAACCAAAAC | + |
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Preference number: 3 (lower is better) Translates to: QKVNKKLGEVAHTFNLTLVGYKD*VSKNQN Trigger: GTTTTGGTTTTTGGAGACCAAGTCTTTGTAGCCCAC...TAGTGTAAGATTAAAGGTGTGCGCCACTTCGCCCAGCTTTTTGTTAACTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| 3UTR TCA 72 bp | GTTAGCCTCAGACACCAGCTTTGCAACTCAGGCTCCTaGTTCTTCATTTGTAAACACGTTGATTGTAATAAC | + |
|
Preference number: 3 (lower is better) Translates to: VSLRHQLCNSGS*FFICKHVDCNN Trigger: GTTATTACAATCAACGTGTTTACAAATGAAGAATCAGGAGCCTGAGTTGCAAAGCTGGTGTCTGAGGCTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAAAATCCAGCCTTTAGGCCTTGTTGGATTTGGGTCAGGCTGGCCCAAGGCTGCAAGGCCAGGCTCTaGCGGGCATCCTGCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RQNPAFRPCWIWVRLAQGCKARL*RASCNW Trigger: CCAGTTGCAGGATGCCCGTCAGAGCCTGGCCTTGCA...GCCTTGGGCCAGCCTGACCCAAATCCAACAAGGCCTAAAGGCTGGATTTTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR GCA 90 bp | AGGCAAAATCCAGCCTTTAGGCCTTGTTGGATTTGGGTCAGGCTGGCCCAAGGCCAGTGCCTTCACCCATaGCTCTTGGGCAGCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RQNPAFRPCWIWVRLAQGQCLHP*LLGSLP Trigger: GGGCAGGCTGCCCAAGAGGCATGGGTGAAGGCACTG...GCCTTGGGCCAGCCTGACCCAAATCCAACAAGGCCTAAAGGCTGGATTTTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGGAGGCAAAATCCAGCCTTTAGGCCTTGTTGGATTTGGGTCAGGCTGGCCTTCGGCCAGTGCCACTaGGAGTGGGTGGGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SWRQNPAFRPCWIWVRLAFGQCH*EWVGNL Trigger: CAGGTTCCCCACCCACTCCCAGTGGCACTGGCCGAA...GGCCAGCCTGACCCAAATCCAACAAGGCCTAAAGGCTGGATTTTGCCTCCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR GCA 90 bp | ACTATACATGGACAGGGCAGCAGCGGGAGAGAGAACAAATCCCTCTTTAGCACCGCCTCTTGGGCAGCCTaGCCATCTGCTGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TIHGQGSSGRENKSLFSTASWAA*PSAASR Trigger: CCTGCTGGCAGCAGATGGGCAGGCTGCCCAAGAGGC...GGTGCTAAAGAGGGATTTGTTCTCTCTCCCGCTGCTGCCCTGTCCATGTATAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCACCTCTGGCATGGAGATGCCCAAGACTTCTTGTGTTGGACTTTATGGCTGCCACTGGGAGTGGGTaGGGAACCTGGTCCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPLAWRCPRLLVLDFMAATGSG*GTWSSP Trigger: TGGGGAGGACCAGGTTCCCCACCCACTCCCAGTGGC...AGCCATAAAGTCCAACACAAGAAGTCTTGGGCATCTCCATGCCAGAGGTGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACATAGCCCTGACCAGAGGAACCATGGAACTCAGTCTCCTGGAGGCAAAAGCCACTGGGAGTGGGTaGGGAACCTGGTCCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RNIALTRGTMELSLLEAKATGSG*GTWSSP Trigger: TGGGGAGGACCAGGTTCCCCACCCACTCCCAGTGGC...TTTTGCCTCCAGGAGACTGAGTTCCATGGTTCCTCTGGTCAGGGCTATGTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAAAATCCAGCCTTTAGGCCTTGTTGGATTTGGGTCAGGCTGGCCCAAGGCTCCCTGGGGAGAAAGTaGCCGTTCTCAGGGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQNPAFRPCWIWVRLAQGSLGRK*PFSGSG Trigger: TCCAGACCCTGAGAACGGCCACTTTCTCCCCAGGGA...GCCTTGGGCCAGCCTGACCCAAATCCAACAAGGCCTAAAGGCTGGATTTTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR TCA 90 bp | CTGTCACCTCTGGCATGGAGATGCCCAAGACTTCTTGTGTTGGACTTTATGGCTTGCAAGGCCAGGCTCTaGCGGGCATCCTGCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPLAWRCPRLLVLDFMACKARL*RASCNW Trigger: CCAGTTGCAGGATGCCCGTCAGAGCCTGGCCTTGCA...AGCCATAAAGTCCAACACAAGAAGTCTTGGGCATCTCCATGCCAGAGGTGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR GCA 90 bp | AGGCAAAATCCAGCCTTTAGGCCTTGTTGGATTTGGGTCAGGCTGGCCCAAGGCTGTCTGGCTTCCTTTTaGCCTTTGCTGCCACCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RQNPAFRPCWIWVRLAQGCLASF*PLLPPS Trigger: CGAGGGTGGCAGCAAAGGGCAAAAGGAAGCCAGACA...GCCTTGGGCCAGCCTGACCCAAATCCAACAAGGCCTAAAGGCTGGATTTTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCACCTCTGGCATGGAGATGCCCAAGACTTCTTGTGTTGGACTTTATGGCTAGTATCTTCGGCCAGTaGCACTGGGAGTGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPLAWRCPRLLVLDFMASIFGQ*HWEWVG Trigger: CCCCACCCACTCCCAGTGGCACTGGCCGAAGATACT...AGCCATAAAGTCCAACACAAGAAGTCTTGGGCATCTCCATGCCAGAGGTGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR GCA 90 bp | AGGCAAAATCCAGCCTTTAGGCCTTGTTGGATTTGGGTCAGGCTGGCCCAAGGCCAGTACCAATGGAACTaGGGTCCCTGGGGAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQNPAFRPCWIWVRLAQGQYQWN*GPWGES Trigger: ACTTTCTCCCCAGGGACCGCAGTTCCATTGGTACTG...GCCTTGGGCCAGCCTGACCCAAATCCAACAAGGCCTAAAGGCTGGATTTTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR GCA 90 bp | AGAAACATAGCCCTGACCAGAGGAACCATGGAACTCAGTCTCCTGGAGGCAAAACCTTTTGCCCTTTGCTaGCACCCTCGCCTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RNIALTRGTMELSLLEAKPFALC*HPRLSS Trigger: GGAGCTGAGGCGAGGGTGGCAGCAAAGGGCAAAAGG...TTTTGCCTCCAGGAGACTGAGTTCCATGGTTCCTCTGGTCAGGGCTATGTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR CCA 90 bp | CCACTTCCTGTCACCTCTGGCATGGAGATGCCCAAGACTTCTTGTGTTGGACTTTGGAACTGCGGTCCCTaGGGAGAAAGTGGCCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLPVTSGMEMPKTSCVGLWNCGP*GESGRS Trigger: AGAACGGCCACTTTCTCCCCAGGGACCGCAGTTCCA...AAGTCCAACACAAGAAGTCTTGGGCATCTCCATGCCAGAGGTGACAGGAAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCACTTCCTGAATTATATTATCTTCCCATCAACCACCTGGCCTTTCTAGACCAGTGCCACTGGGAGTaGGTGGGGAACCTGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: APLPELYYLPINHLAFLDQCHWE*VGNLVL Trigger: GAGGACCAGGTTCCCCACCCACTCCCAGTGGCACTG...GTCTAGAAAGGCCAGGTGGTTGATGGGAAGATAATATAATTCAGGAAGTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR CCA 90 bp | ACTATACATGGACAGGGCAGCAGCGGGAGAGAGAACAAATCCCTCTTTAGCACCGCATGTAGCCAAAGCTaGCTCGGGACAGTGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TIHGQGSSGRENKSLFSTACSQS*LGTVPS Trigger: TGAAGGCACTGTCCCGAGCCAGCTTTGGCTACATGC...GGTGCTAAAGAGGGATTTGTTCTCTCTCCCGCTGCTGCCCTGTCCATGTATAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACATAGCCCTGACCAGAGGAACCATGGAACTCAGTCTCCTGGAGGCAAAATGGAACTGCGGTCCCTaGGGAGAAAGTGGCCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RNIALTRGTMELSLLEAKWNCGP*GESGRS Trigger: AGAACGGCCACTTTCTCCCCAGGGACCGCAGTTCCA...TTTTGCCTCCAGGAGACTGAGTTCCATGGTTCCTCTGGTCAGGGCTATGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| 3UTR CAA 72 bp | TCCTGTCACCTCTGGCATGGAGATGCCCAAGACTTCTaGTGTTGGACTTTATGGCTAGAGAGCAGAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCHLWHGDAQDF*CWTLWLESRAP Trigger: TGGGGCTCTGCTCTCTAGCCATAAAGTCCAACACAAGAAGTCTTGGGCATCTCCATGCCAGAGGTGACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR GCA 90 bp | GCCCCACTTCCTGAATTATATTATCTTCCCATCAACCACCTGGCCTTTCTAGACAGTATCTTCGGCCAGTaGCACTGGGAGTGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: APLPELYYLPINHLAFLDSIFGQ*HWEWVG Trigger: CCCCACCCACTCCCAGTGGCACTGGCCGAAGATACT...GTCTAGAAAGGCCAGGTGGTTGATGGGAAGATAATATAATTCAGGAAGTGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR GCA 90 bp | AGGCAAAATCCAGCCTTTAGGCCTTGTTGGATTTGGGTCAGGCTGGCCCAAGGCTTCCCATACCAGTCATaGAGGGTAGAGAAACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQNPAFRPCWIWVRLAQGFPYQS*RVEKQE Trigger: CTCCTGTTTCTCTACCCTGCATGACTGGTATGGGAA...GCCTTGGGCCAGCCTGACCCAAATCCAACAAGGCCTAAAGGCTGGATTTTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR GCA 90 bp | AGAAACATAGCCCTGACCAGAGGAACCATGGAACTCAGTCTCCTGGAGGCAAAATGTCTGGCTTCCTTTTaGCCTTTGCTGCCACCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RNIALTRGTMELSLLEAKCLASF*PLLPPS Trigger: CGAGGGTGGCAGCAAAGGGCAAAAGGAAGCCAGACA...TTTTGCCTCCAGGAGACTGAGTTCCATGGTTCCTCTGGTCAGGGCTATGTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR GCA 90 bp | AGAAACATAGCCCTGACCAGAGGAACCATGGAACTCAGTCTCCTGGAGGCAAAACAGTACCAATGGAACTaGGGTCCCTGGGGAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RNIALTRGTMELSLLEAKQYQWN*GPWGES Trigger: ACTTTCTCCCCAGGGACCGCAGTTCCATTGGTACTG...TTTTGCCTCCAGGAGACTGAGTTCCATGGTTCCTCTGGTCAGGGCTATGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| 3UTR CAA 72 bp | GGAGGTCATACCACCAAGCCAGGTTCTTGGACTCAATaGTTAGCCTCAGACACCAGCTTTGCAACTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGHTTKPGSWTQ*LASDTSFATQA Trigger: AGCCTGAGTTGCAAAGCTGGTGTCTGAGGCTAACAATTGAGTCCAAGAACCTGGCTTGGTGGTATGACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| 3UTR CAA 72 bp | TGGGCGAAGTGGCGCACACCTTTAATCTTACACTACTaGGGATGCAGAGGCAGGAGGATCTCTGTGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WAKWRTPLILHY*GCRGRRISVSS Trigger: TGAACTCACAGAGATCCTCCTGCCTCTGCATCCCAAGTAGTGTAAGATTAAAGGTGTGCGCCACTTCGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR TCA 90 bp | AGAAACATAGCCCTGACCAGAGGAACCATGGAACTCAGTCTCCTGGAGGCAAAACGGTGGTCAGGAGCCTaGGATTTACTACAATTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RNIALTRGTMELSLLEAKRWSGA*DLLQLA Trigger: TGCCAATTGTAGTAAATCTCAGGCTCCTGACCACCG...TTTTGCCTCCAGGAGACTGAGTTCCATGGTTCCTCTGGTCAGGGCTATGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR GCA 90 bp | TTAGAGCTAAAGAAAAAGATACTTGGAATGACACGGGACAGAGTAGCTATGAGAGCCTCTTGGGCAGCCTaGCCATCTGCTGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LELKKKILGMTRDRVAMRASWAA*PSAASR Trigger: CCTGCTGGCAGCAGATGGGCAGGCTGCCCAAGAGGC...TCTCATAGCTACTCTGTCCCGTGTCATTCCAAGTATCTTTTTCTTTAGCTCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAAGTTAACAAAAAGCTGGGCGAAGTGGCGCACACCTTTAATCTTACACTATTCGGCCAGTGCCACTaGGAGTGGGTGGGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QKVNKKLGEVAHTFNLTLFGQCH*EWVGNL Trigger: CAGGTTCCCCACCCACTCCCAGTGGCACTGGCCGAA...TAGTGTAAGATTAAAGGTGTGCGCCACTTCGCCCAGCTTTTTGTTAACTTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCACTTCCTGAATTATATTATCTTCCCATCAACCACCTGGCCTTTCTAGACGCATGTAGCCAAAGCTaGCTCGGGACAGTGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: APLPELYYLPINHLAFLDACSQS*LGTVPS Trigger: TGAAGGCACTGTCCCGAGCCAGCTTTGGCTACATGC...GTCTAGAAAGGCCAGGTGGTTGATGGGAAGATAATATAATTCAGGAAGTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR CCA 90 bp | ACTATACATGGACAGGGCAGCAGCGGGAGAGAGAACAAATCCCTCTTTAGCACCGACTTGTTCTCTGTCTaGCTTCCTTTTGCCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TIHGQGSSGRENKSLFSTDLFSV*LPFALC Trigger: GCAAAGGGCAAAAGGAAGCCAGACAGAGAACAAGTC...GGTGCTAAAGAGGGATTTGTTCTCTCTCCCGCTGCTGCCCTGTCCATGTATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACATAGCCCTGACCAGAGGAACCATGGAACTCAGTCTCCTGGAGGCAAAAGACTTGTTCTCTGTCTaGCTTCCTTTTGCCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RNIALTRGTMELSLLEAKDLFSV*LPFALC Trigger: GCAAAGGGCAAAAGGAAGCCAGACAGAGAACAAGTC...TTTTGCCTCCAGGAGACTGAGTTCCATGGTTCCTCTGGTCAGGGCTATGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCACTTCCTGAATTATATTATCTTCCCATCAACCACCTGGCCTTTCTAGACGAGATTTACTACAATTaGCAACAGCCCTCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: APLPELYYLPINHLAFLDEIYYN*QQPSGM Trigger: CATCCCAGAGGGCTGTTGCCAATTGTAGTAAATCTC...GTCTAGAAAGGCCAGGTGGTTGATGGGAAGATAATATAATTCAGGAAGTGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR TCA 90 bp | CAAAAAGTTAACAAAAAGCTGGGCGAAGTGGCGCACACCTTTAATCTTACACTACGGTGGTCAGGAGCCTaGGATTTACTACAATTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QKVNKKLGEVAHTFNLTLRWSGA*DLLQLA Trigger: TGCCAATTGTAGTAAATCTCAGGCTCCTGACCACCG...TAGTGTAAGATTAAAGGTGTGCGCCACTTCGCCCAGCTTTTTGTTAACTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTAAAGAAAAAGATACTTGGAATGACACGGGACAGAGTAGCTATGAGAGCCGAGATTTACTACAATTaGCAACAGCCCTCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ELKKKILGMTRDRVAMRAEIYYN*QQPSGM Trigger: CATCCCAGAGGGCTGTTGCCAATTGTAGTAAATCTC...GGCTCTCATAGCTACTCTGTCCCGTGTCATTCCAAGTATCTTTTTCTTTAGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| 3UTR CAA 72 bp | GAGTCCAATTTTGTTTGGGAACGGTATACATCTCTATaGAGCCACAGCCACTGTCACTACATCTATATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ESNFVWERYTSL*SHSHCHYIYIK Trigger: CTTTATATAGATGTAGTGACAGTGGCTGTGGCTCAATAGAGATGTATACCGTTCCCAAACAAAATTGGACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| 3UTR CAA 72 bp | GCAACTCAGGCTCCTGATTCTTCATTTGTAAACACGTaGATTGTAATAACCAAAATTAACTTTCTGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATQAPDSSFVNT*IVITKINFLRG Trigger: CCCTCTCAGAAAGTTAATTTTGGTTATTACAATCAACGTGTTTACAAATGAAGAATCAGGAGCCTGAGTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS GCA 90 bp | AAGCTGGCTCGGGACAGTGCCTTCACCCATGCCTCTTGGGCAGCCTaGCCATCTGCTGCCAGCAGGTGTGGGCGCACTCCAGGGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: KLARDSAFTHASWAA*PSAASRCGRTPGAS Trigger: TGATGCCCCTGGAGTGCGCCCACACCTGCTGGCAGCAGATGGGCAGGCTGCCCAAGAGGCATGGGTGAAGGCACTGTCCCGAGCCAGCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS GCA 90 bp | GGACAGTGCCTTCACCCATGCCTCTTGGGCAGCCTGCCCATCTGCTaGCAGCAGGTGTGGGCGCACTCCAGGGGCATCAAAGCGAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: GQCLHPCLLGSLPIC*QQVWAHSRGIKANS Trigger: GCTATTCGCTTTGATGCCCCTGGAGTGCGCCCACACCTGCTGGCAGCAGATGGGCAGGCTGCCCAAGAGGCATGGGTGAAGGCACTGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS GCA 90 bp | TCGGGACAGTGCCTTCACCCATGCCTCTTGGGCAGCCTGCCCATCTaGTGCCAGCAGGTGTGGGCGCACTCCAGGGGCATCAAAGCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SGQCLHPCLLGSLPI*CQQVWAHSRGIKAN Trigger: ATTCGCTTTGATGCCCCTGGAGTGCGCCCACACCTGCTGGCAGCAGATGGGCAGGCTGCCCAAGAGGCATGGGTGAAGGCACTGTCCCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS GCA 90 bp | AAGTCGCATGTAGCCAAAGCTGGCTCGGGACAGTGCCTTCACCCATaGCTCTTGGGCAGCCTGCCCATCTGCTGCCAGCAGGTGTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KSHVAKAGSGQCLHP*LLGSLPICCQQVWA Trigger: CGCCCACACCTGCTGGCAGCAGATGGGCAGGCTGCCCAAGAGGCATGGGTGAAGGCACTGTCCCGAGCCAGCTTTGGCTACATGCGACTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS CCA 90 bp | GCCGGATCCCCCTTTCTTCCACAGTACCAATGGAACTGCGGTCCCTaGGGAGAAAGTGGCCGTTCTCAGGGTCTGGAGCTCGGTGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGSPFLPQYQWNCGP*GESGRSQGLELGGQ Trigger: CTGACCACCGAGCTCCAGACCCTGAGAACGGCCACTTTCTCCCCAGGGACCGCAGTTCCATTGGTACTGTGGAAGAAAGGGGGATCCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS CCA 90 bp | AAACCAGTATCTTCGGCCAGTGCCACTGGGAGTGGGTGGGGAACCTaGTCCTCCCCAACTACGCAGAAAGCCAGTGTGGTCTGCCGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KPVSSASATGSGWGT*SSPTTQKASVVCRR Trigger: TCTCCGGCAGACCACACTGGCTTTCTGCGTAGTTGGGGAGGACCAGGTTCCCCACCCACTCCCAGTGGCACTGGCCGAAGATACTGGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS TCA 90 bp | TTGGCAACAGCCCTCTGGGATGCACAGCGATGCAAGGCCAGGCTCTaGCGGGCATCCTGCAACTGGCTCTCCAATTCTCGCACCACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LATALWDAQRCKARL*RASCNWLSNSRTTS Trigger: ACTTGTGGTGCGAGAATTGGAGAGCCAGTTGCAGGATGCCCGTCAGAGCCTGGCCTTGCATCGCTGTGCATCCCAGAGGGCTGTTGCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS GCA 90 bp | GACCTATTGGCCGGATCCCCCTTTCTTCCACAGTACCAATGGAACTaGGGTCCCTGGGGAGAAAGTGGCCGTTCTCAGGGTCTGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DLLAGSPFLPQYQWN*GPWGESGRSQGLEL Trigger: GAGCTCCAGACCCTGAGAACGGCCACTTTCTCCCCAGGGACCGCAGTTCCATTGGTACTGTGGAAGAAAGGGGGATCCGGCCAATAGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS GCA 90 bp | TGGGGAACCTGGTCCTCCCCAACTACGCAGAAAGCCAGTGTGGTCTaGCGGAGAATCACTCAGCGCATAGTGGGCCACACTCCTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: WGTWSSPTTQKASVV*RRITQRIVGHTPLV Trigger: AACAAGAGGAGTGTGGCCCACTATGCGCTGAGTGATTCTCCGGCAGACCACACTGGCTTTCTGCGTAGTTGGGGAGGACCAGGTTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
||
| CDS CCA 90 bp | CTTGAGAACAAACCAGTATCTTCGGCCAGTGCCACTGGGAGTGGGTaGGGAACCTGGTCCTCCCCAACTACGCAGAAAGCCAGTGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LENKPVSSASATGSG*GTWSSPTTQKASVV Trigger: GACCACACTGGCTTTCTGCGTAGTTGGGGAGGACCAGGTTCCCCACCCACTCCCAGTGGCACTGGCCGAAGATACTGGTTTGTTCTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS CCA 90 bp | CAGGGTCTGGAGCTCGGTGGTCAGGAGCCTGAGATTTACTACAATTaGCAACAGCCCTCTGGGATGCACAGCGATGCAAGGCCAGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: QGLELGGQEPEIYYN*QQPSGMHSDARPGS Trigger: AGAGCCTGGCCTTGCATCGCTGTGCATCCCAGAGGGCTGTTGCCAATTGTAGTAAATCTCAGGCTCCTGACCACCGAGCTCCAGACCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS GCA 90 bp | GTCAGGAGCCTGAGATTTACTACAATTGGCAACAGCCCTCTGGGATaGACAGCGATGCAAGGCCAGGCTCTGACGGGCATCCTGCAACTG | + |
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Preference number: 5 (lower is better) Translates to: VRSLRFTTIGNSPLG*TAMQGQALTGILQL Trigger: CAGTTGCAGGATGCCCGTCAGAGCCTGGCCTTGCATCGCTGTGCATCCCAGAGGGCTGTTGCCAATTGTAGTAAATCTCAGGCTCCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS CCA 90 bp | AATGGAACTGCGGTCCCTGGGGAGAAAGTGGCCGTTCTCAGGGTCTaGAGCTCGGTGGTCAGGAGCCTGAGATTTACTACAATTGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: NGTAVPGEKVAVLRV*SSVVRSLRFTTIGN Trigger: GTTGCCAATTGTAGTAAATCTCAGGCTCCTGACCACCGAGCTCCAGACCCTGAGAACGGCCACTTTCTCCCCAGGGACCGCAGTTCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS-3UTR CAA 90 bp | GTTACAAGCAGGCTTGAGAAACATAGCCCTGACCAGAGGAACCATGGAACTCAGCTTCACCCATGCCTCTaGGGCAGCCTGCCCATCTGC | + |
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Preference number: 5 (lower is better) Translates to: VTSRLEKHSPDQRNHGTQLHPCL*GSLPIC Trigger: GCAGATGGGCAGGCTGCCCAAGAGGCATGGGTGAAG...CTGAGTTCCATGGTTCCTCTGGTCAGGGCTATGTTTCTCAAGCCTGCTTGTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS-3UTR CAA 90 bp | AGAAACATAGCCCTGACCAGAGGAACCATGGAACTCAGTCTCCTGGAGGCAAAACTTCACCCATGCCTCTaGGGCAGCCTGCCCATCTGC | + |
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Preference number: 5 (lower is better) Translates to: RNIALTRGTMELSLLEAKLHPCL*GSLPIC Trigger: GCAGATGGGCAGGCTGCCCAAGAGGCATGGGTGAAG...TTTTGCCTCCAGGAGACTGAGTTCCATGGTTCCTCTGGTCAGGGCTATGTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS GCA 90 bp | GGCCTATTCTGTGACTTGTTCTCTGTCTGGCTTCCTTTTGCCCTTTaGTGCCACCCTCGCCTCAGCTCCATGATCTCCTTCCCATACCAG | + |
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Preference number: 5 (lower is better) Translates to: GLFCDLFSVWLPFAL*CHPRLSSMISFPYQ Trigger: CTGGTATGGGAAGGAGATCATGGAGCTGAGGCGAGGGTGGCAGCAAAGGGCAAAAGGAAGCCAGACAGAGAACAAGTCACAGAATAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS-3UTR CAA 90 bp | CTGTCACCTCTGGCATGGAGATGCCCAAGACTTCTTGTGTTGGACTTTATGGCTGCTTCCTTTTGCCCTTaGCTGCCACCCTCGCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LSPLAWRCPRLLVLDFMAASFCP*LPPSPQ Trigger: CTGAGGCGAGGGTGGCAGCAAAGGGCAAAAGGAAGC...AGCCATAAAGTCCAACACAAGAAGTCTTGGGCATCTCCATGCCAGAGGTGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS-3UTR CAA 90 bp | TCCTGGAGGCAAAATCCAGCCTTTAGGCCTTGTTGGATTTGGGTCAGGCTGGCCGGCCTATTCTGTGACTaGTTCTCTGTCTGGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: SWRQNPAFRPCWIWVRLAGLFCD*FSVWLP Trigger: AGGAAGCCAGACAGAGAACAAGTCACAGAATAGGCC...GGCCAGCCTGACCCAAATCCAACAAGGCCTAAAGGCTGGATTTTGCCTCCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS-3UTR CAA 90 bp | GCCCCACTTCCTGAATTATATTATCTTCCCATCAACCACCTGGCCTTTCTAGACCTGTCTGGCTTCCTTTaGCCCTTTGCTGCCACCCTC | + |
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Preference number: 5 (lower is better) Translates to: APLPELYYLPINHLAFLDLSGFL*PFAATL Trigger: GAGGGTGGCAGCAAAGGGCAAAAGGAAGCCAGACAG...GTCTAGAAAGGCCAGGTGGTTGATGGGAAGATAATATAATTCAGGAAGTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS-3UTR CAA 90 bp | GAGCTAAAGAAAAAGATACTTGGAATGACACGGGACAGAGTAGCTATGAGAGCCCTGTCTGGCTTCCTTTaGCCCTTTGCTGCCACCCTC | + |
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Preference number: 5 (lower is better) Translates to: ELKKKILGMTRDRVAMRALSGFL*PFAATL Trigger: GAGGGTGGCAGCAAAGGGCAAAAGGAAGCCAGACAG...GGCTCTCATAGCTACTCTGTCCCGTGTCATTCCAAGTATCTTTTTCTTTAGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS-3UTR CAA 90 bp | AGGCAAAATCCAGCCTTTAGGCCTTGTTGGATTTGGGTCAGGCTGGCCCAAGGCAATAGCAGATTGCCCTaGAGAACAAACCAGTATCTT | + |
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Preference number: 5 (lower is better) Translates to: RQNPAFRPCWIWVRLAQGNSRLP*RTNQYL Trigger: AAGATACTGGTTTGTTCTCAAGGGCAATCTGCTATT...GCCTTGGGCCAGCCTGACCCAAATCCAACAAGGCCTAAAGGCTGGATTTTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS-3UTR CAA 90 bp | CCACTTCCTGTCACCTCTGGCATGGAGATGCCCAAGACTTCTTGTGTTGGACTTAATAGCAGATTGCCCTaGAGAACAAACCAGTATCTT | + |
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Preference number: 5 (lower is better) Translates to: PLPVTSGMEMPKTSCVGLNSRLP*RTNQYL Trigger: AAGATACTGGTTTGTTCTCAAGGGCAATCTGCTATT...AAGTCCAACACAAGAAGTCTTGGGCATCTCCATGCCAGAGGTGACAGGAAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS-3UTR CAA 90 bp | TTAGAGCTAAAGAAAAAGATACTTGGAATGACACGGGACAGAGTAGCTATGAGAGGCCTATTCTGTGACTaGTTCTCTGTCTGGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: LELKKKILGMTRDRVAMRGLFCD*FSVWLP Trigger: AGGAAGCCAGACAGAGAACAAGTCACAGAATAGGCC...TCTCATAGCTACTCTGTCCCGTGTCATTCCAAGTATCTTTTTCTTTAGCTCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS GCA 72 bp | CGGGACAGTGCCTTCACCCATGCCTCTTGGGCAGCCTaGCCATCTGCTGCCAGCAGGTGTGGGCGCACTCCA | + |
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Preference number: 6 (lower is better) Translates to: RDSAFTHASWAA*PSAASRCGRTP Trigger: TGGAGTGCGCCCACACCTGCTGGCAGCAGATGGGCAGGCTGCCCAAGAGGCATGGGTGAAGGCACTGTCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS GCA 72 bp | ACTCCTCGGGTACAGGAGCCTCGGCCAGCTCCACCGTaGAGCCTTCCAATACCACAAGACTCAGCGGGACCC | + |
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Preference number: 6 (lower is better) Translates to: TPRVQEPRPAPP*SLPIPQDSAGP Trigger: GGGTCCCGCTGAGTCTTGTGGTATTGGAAGGCTGCACGGTGGAGCTGGCCGAGGCTCCTGTACCCGAGGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS GCA 72 bp | GTAGCCAAAGCTGGCTCGGGACAGTGCCTTCACCCATaGCTCTTGGGCAGCCTGCCCATCTGCTGCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: VAKAGSGQCLHP*LLGSLPICCQQ Trigger: CTGCTGGCAGCAGATGGGCAGGCTGCCCAAGAGGCATGGGTGAAGGCACTGTCCCGAGCCAGCTTTGGCTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS TCA 72 bp | GCCCTCTGGGATGCACAGCGATGCAAGGCCAGGCTCTaGCGGGCATCCTGCAACTGGCTCTCCAATTCTCGC | + |
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Preference number: 6 (lower is better) Translates to: ALWDAQRCKARL*RASCNWLSNSR Trigger: GCGAGAATTGGAGAGCCAGTTGCAGGATGCCCGTCAGAGCCTGGCCTTGCATCGCTGTGCATCCCAGAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS CCA 72 bp | CTCTTGGGCAGCCTGCCCATCTGCTGCCAGCAGGTGTaGGCGCACTCCAGGGGCATCAAAGCGAATAGCGAA | + |
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Preference number: 6 (lower is better) Translates to: LLGSLPICCQQV*AHSRGIKANSE Trigger: TTCGCTATTCGCTTTGATGCCCCTGGAGTGCGCCCACACCTGCTGGCAGCAGATGGGCAGGCTGCCCAAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS GCA 72 bp | CACAAGTCGCATGTAGCCAAAGCTGGCTCGGGACAGTaGCTTCACCCATGCCTCTTGGGCAGCCTGCCCATC | + |
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Preference number: 6 (lower is better) Translates to: HKSHVAKAGSGQ*LHPCLLGSLPI Trigger: GATGGGCAGGCTGCCCAAGAGGCATGGGTGAAGGCACTGTCCCGAGCCAGCTTTGGCTACATGCGACTTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS GCA 72 bp | GCCGGATCCCCCTTTCTTCCACAGTACCAATGGAACTaGGGTCCCTGGGGAGAAAGTGGCCGTTCTCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: AGSPFLPQYQWN*GPWGESGRSQG Trigger: ACCCTGAGAACGGCCACTTTCTCCCCAGGGACCGCAGTTCCATTGGTACTGTGGAAGAAAGGGGGATCCGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS CCA 72 bp | AAACCAGTATCTTCGGCCAGTGCCACTGGGAGTGGGTaGGGAACCTGGTCCTCCCCAACTACGCAGAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: KPVSSASATGSG*GTWSSPTTQKA Trigger: GGCTTTCTGCGTAGTTGGGGAGGACCAGGTTCCCCACCCACTCCCAGTGGCACTGGCCGAAGATACTGGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS CCA 72 bp | GCGGTCCCTGGGGAGAAAGTGGCCGTTCTCAGGGTCTaGAGCTCGGTGGTCAGGAGCCTGAGATTTACTACA | + |
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Preference number: 6 (lower is better) Translates to: AVPGEKVAVLRV*SSVVRSLRFTT Trigger: TGTAGTAAATCTCAGGCTCCTGACCACCGAGCTCCAGACCCTGAGAACGGCCACTTTCTCCCCAGGGACCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS GCA 72 bp | TGGTCCTCCCCAACTACGCAGAAAGCCAGTGTGGTCTaGCGGAGAATCACTCAGCGCATAGTGGGCCACACT | + |
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Preference number: 6 (lower is better) Translates to: WSSPTTQKASVV*RRITQRIVGHT Trigger: AGTGTGGCCCACTATGCGCTGAGTGATTCTCCGGCAGACCACACTGGCTTTCTGCGTAGTTGGGGAGGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS CCA 72 bp | GAACAAACCAGTATCTTCGGCCAGTGCCACTGGGAGTaGGTGGGGAACCTGGTCCTCCCCAACTACGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: EQTSIFGQCHWE*VGNLVLPNYAE Trigger: TTCTGCGTAGTTGGGGAGGACCAGGTTCCCCACCCACTCCCAGTGGCACTGGCCGAAGATACTGGTTTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS CCA 72 bp | CCAATTCTCGCACCACAAGTCGCATGTAGCCAAAGCTaGCTCGGGACAGTGCCTTCACCCATGCCTCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: PILAPQVACSQS*LGTVPSPMPLG Trigger: CCCAAGAGGCATGGGTGAAGGCACTGTCCCGAGCCAGCTTTGGCTACATGCGACTTGTGGTGCGAGAATTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS CCA 72 bp | CCCTTTCTTCCACAGTACCAATGGAACTGCGGTCCCTaGGGAGAAAGTGGCCGTTCTCAGGGTCTGGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: PFLPQYQWNCGP*GESGRSQGLEL Trigger: GAGCTCCAGACCCTGAGAACGGCCACTTTCTCCCCAGGGACCGCAGTTCCATTGGTACTGTGGAAGAAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS GCA 72 bp | CGCCTCAGCTCCATGATCTCCTTCCCATACCAGTCATaGAGGGTAGAGAAACAGGAGCTCTCAGGGGACACG | + |
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Preference number: 6 (lower is better) Translates to: RLSSMISFPYQS*RVEKQELSGDT Trigger: CGTGTCCCCTGAGAGCTCCTGTTTCTCTACCCTGCATGACTGGTATGGGAAGGAGATCATGGAGCTGAGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS CCA 72 bp | CTATTGGCCGGATCCCCCTTTCTTCCACAGTACCAATaGAACTGCGGTCCCTGGGGAGAAAGTGGCCGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLAGSPFLPQYQ*NCGPWGESGRS Trigger: AGAACGGCCACTTTCTCCCCAGGGACCGCAGTTCCATTGGTACTGTGGAAGAAAGGGGGATCCGGCCAATAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS GCA 72 bp | CTGAGATTTACTACAATTGGCAACAGCCCTCTGGGATaGACAGCGATGCAAGGCCAGGCTCTGACGGGCATC | + |
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Preference number: 6 (lower is better) Translates to: LRFTTIGNSPLG*TAMQGQALTGI Trigger: GATGCCCGTCAGAGCCTGGCCTTGCATCGCTGTGCATCCCAGAGGGCTGTTGCCAATTGTAGTAAATCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS CCA 72 bp | GAGCTCGGTGGTCAGGAGCCTGAGATTTACTACAATTaGCAACAGCCCTCTGGGATGCACAGCGATGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: ELGGQEPEIYYN*QQPSGMHSDAR Trigger: CCTTGCATCGCTGTGCATCCCAGAGGGCTGTTGCCAATTGTAGTAAATCTCAGGCTCCTGACCACCGAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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| CDS CAA 90 bp | GGGACCCGGCTCTCTCTAGTCTCGAAAGAGAATAGCAGATTGCCCTaGAGAACAAACCAGTATCTTCGGCCAGTGCCACTGGGAGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: GTRLSLVSKENSRLP*RTNQYLRPVPLGVG Trigger: ACCCACTCCCAGTGGCACTGGCCGAAGATACTGGTTTGTTCTCAAGGGCAATCTGCTATTCTCTTTCGAGACTAGAGAGAGCCGGGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050349.3 ENSMUST00000161178.2 |
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