Pregenerated sensors for PHETA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044134Ensembl transcript IDs: ENSMUST00000056654.8, ENSMUST00000198155.2, ENSMUST00000198271.5
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCAAGTGCCCTGGCCCCTGAGCCAGCAGAGAGCCAAGAGGCCCTaGCGACAGACAGAAGCACCCATGGGACCCAGCCACCCCACCCCC | + |
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Preference number: 1 (lower is better) Translates to: SQVPWPLSQQRAKRP*RQTEAPMGPSHPTP Trigger: GGGGGTGGGGTGGCTGGGTCCCATGGGTGCTTCTGTCTGTCGCCAGGGCCTCTTGGCTCTCTGCTGGCTCAGGGGCCAGGGCACTTGGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR GCA 90 bp | GAGGGCCAAGTCAGGGCCAAGTCAGCTAGGCGCCCGTGTGTCTCCTaGGAGGGCCTGGCTCCCTGGAGACAATGCCACCCCTTGCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: EGQVRAKSARRPCVS*EGLAPWRQCHPLQP Trigger: TGGCTGCAAGGGGTGGCATTGTCTCCAGGGAGCCAGGCCCTCGCAGGAGACACACGGGCGCCTAGCTGACTTGGCCCTGACTTGGCCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR TCA 90 bp | CCCTGCTGCAGGCATGGAATCAGTCGGAGGCCTGTCTCCTCCAGGTaGAACTGGGAGGAAGCTGGGTCCCAGGCCAGGACCGAGGTCAGG | + |
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Preference number: 1 (lower is better) Translates to: PCCRHGISRRPVSSR*NWEEAGSQARTEVR Trigger: CCTGACCTCGGTCCTGGCCTGGGACCCAGCTTCCTCCCAGTTTCACCTGGAGGAGACAGGCCTCCGACTGATTCCATGCCTGCAGCAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR TCA 90 bp | GCCGGCTGTCCTGCCCAACCCTCTGGAAGACAGCCAGCACTGTGGTaGGAGAGAAGTAGGCCCAGTCCTGAGGCCCACTGGTCACCTGCA | + |
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Preference number: 1 (lower is better) Translates to: AGCPAQPSGRQPALW*ERSRPSPEAHWSPA Trigger: TGCAGGTGACCAGTGGGCCTCAGGACTGGGCCTACTTCTCTCTCACCACAGTGCTGGCTGTCTTCCAGAGGGTTGGGCAGGACAGCCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR CCA 90 bp | CCCTCAGGGCAGGGCACTGAGGAGGACTGTAAACAAGAACCCAGGTaGGGCCGGCTGTCCTGCCCAACCCTCTGGAAGACAGCCAGCACT | + |
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Preference number: 1 (lower is better) Translates to: PSGQGTEEDCKQEPR*GRLSCPTLWKTAST Trigger: AGTGCTGGCTGTCTTCCAGAGGGTTGGGCAGGACAGCCGGCCCCACCTGGGTTCTTGTTTACAGTCCTCCTCAGTGCCCTGCCCTGAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR TCA 90 bp | CCTCTGTACTTCAAAGAAAAACCCACAGCCAAGTGCCCTGGCCCCTaGGCCAGCAGAGAGCCAAGAGGCCCTGGCGACAGACAGAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: PLYFKEKPTAKCPGP*ASREPRGPGDRQKH Trigger: GTGCTTCTGTCTGTCGCCAGGGCCTCTTGGCTCTCTGCTGGCTCAGGGGCCAGGGCACTTGGCTGTGGGTTTTTCTTTGAAGTACAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR GCA 90 bp | ACTGAGGAGGACTGTAAACAAGAACCCAGGTGGGGCCGGCTGTCCTaGCCAACCCTCTGGAAGACAGCCAGCACTGTGGTGAGAGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: TEEDCKQEPRWGRLS*PTLWKTASTVVREK Trigger: CTTCTCTCTCACCACAGTGCTGGCTGTCTTCCAGAGGGTTGGGCAGGACAGCCGGCCCCACCTGGGTTCTTGTTTACAGTCCTCCTCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR CCA 90 bp | GGAGCCTGGGGGACCTATCCAGTTCAAGTCCCACATTCCACCTACTaGTGTAGGCCCACAGCAGCCCAGACAGCAGCTTCCAGGTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: GAWGTYPVQVPHSTY*CRPTAAQTAASRFK Trigger: CTTGAACCTGGAAGCTGCTGTCTGGGCTGCTGTGGGCCTACACCAGTAGGTGGAATGTGGGACTTGAACTGGATAGGTCCCCCAGGCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR CCA 90 bp | ACAGTAGCCTCTGTACTTCAAAGAAAAACCCACAGCCAAGTGCCCTaGCCCCTGAGCCAGCAGAGAGCCAAGAGGCCCTGGCGACAGACA | + |
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Preference number: 1 (lower is better) Translates to: TVASVLQRKTHSQVP*PLSQQRAKRPWRQT Trigger: TGTCTGTCGCCAGGGCCTCTTGGCTCTCTGCTGGCTCAGGGGCCAGGGCACTTGGCTGTGGGTTTTTCTTTGAAGTACAGAGGCTACTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR CCA 90 bp | ATAACTCTCCTAGCCCCAGAATCAGCTGGTGTTCACCTTGTGCTTTaGGGAGAGGGAACAACTCTGCCCTTGTCTCCCCCACCTCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: ITLLAPESAGVHLVL*GEGTTLPLSPPPPA Trigger: GGCAGGAGGTGGGGGAGACAAGGGCAGAGTTGTTCCCTCTCCCCAAAGCACAAGGTGAACACCAGCTGATTCTGGGGCTAGGAGAGTTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | CGCCCGTGTGTCTCCTGCGAGGGCCTGGCTCCCTGGAGACAATGCCACCCCTTGGGCCCCATGGGCCTGTaGCCAGCTTCGGGGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: RPCVSCEGLAPWRQCHPLGPMGL*PASGLS Trigger: TGACAGCCCCGAAGCTGGCCACAGGCCCATGGGGCC...CAAGGGGTGGCATTGTCTCCAGGGAGCCAGGCCCTCGCAGGAGACACACGGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGAGAGCCAAGAGGCCCTGGCGACAGACAGAAGCACCCATGGGACCCAGCAAACCCTGGGCCCCATaGGCCTGTGGCCAGCTTCGG | + |
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Preference number: 2 (lower is better) Translates to: QQRAKRPWRQTEAPMGPSKPWAP*ACGQLR Trigger: CCGAAGCTGGCCACAGGCCCATGGGGCCCAGGGTTT...GCTGGGTCCCATGGGTGCTTCTGTCTGTCGCCAGGGCCTCTTGGCTCTCTGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR GCA 90 bp | CGCCCGTGTGTCTCCTGCGAGGGCCTGGCTCCCTGGAGACAATGCCACCCCTTGTGCCTGGGCTCTCCCTaGTGCAGGCATGGAATCAGT | + |
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Preference number: 2 (lower is better) Translates to: RPCVSCEGLAPWRQCHPLCLGSP*CRHGIS Trigger: ACTGATTCCATGCCTGCAGCAGGGAGAGCCCAGGCA...CAAGGGGTGGCATTGTCTCCAGGGAGCCAGGCCCTCGCAGGAGACACACGGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR GCA 90 bp | CTCCTGCGAGGGCCTGGCTCCCTGGAGACAATGCCACCCCTTGCAGCCAACAGTTGGGGCCGGCTGTCCTaGCCAACCCTCTGGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: LLRGPGSLETMPPLAANSWGRLS*PTLWKT Trigger: TGTCTTCCAGAGGGTTGGGCAGGACAGCCGGCCCCA...ACTGTTGGCTGCAAGGGGTGGCATTGTCTCCAGGGAGCCAGGCCCTCGCAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR GCA 90 bp | AGCCAGCAGAGAGCCAAGAGGCCCTGGCGACAGACAGAAGCACCCATGGGACCCCTGGGCTCTCCCTGCTaGAGGCATGGAATCAGTCGG | + |
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Preference number: 2 (lower is better) Translates to: SQQRAKRPWRQTEAPMGPLGSPC*RHGISR Trigger: CCGACTGATTCCATGCCTGCAGCAGGGAGAGCCCAG...GGGTCCCATGGGTGCTTCTGTCTGTCGCCAGGGCCTCTTGGCTCTCTGCTGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGCATGGAATCAGTCGGAGGCCTGTCTCCTCCAGGTGAAACTGGGAGGAAGCGGCCCCATGGGCCTGTaGCCAGCTTCGGGGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: QAWNQSEACLLQVKLGGSGPMGL*PASGLS Trigger: TGACAGCCCCGAAGCTGGCCACAGGCCCATGGGGCC...GCTTCCTCCCAGTTTCACCTGGAGGAGACAGGCCTCCGACTGATTCCATGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | CCGAGGTCAGGGGAGGCCCTGCTTCTGCCCGGGCTCACCTACAAAGCTGGACACCCACATTCCACCTACTaGTGTAGGCCCACAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: PRSGEALLLPGLTYKAGHPHSTY*CRPTAA Trigger: GGCTGCTGTGGGCCTACACCAGTAGGTGGAATGTGG...GTGTCCAGCTTTGTAGGTGAGCCCGGGCAGAAGCAGGGCCTCCCCTGACCTCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGAGAGCCAAGAGGCCCTGGCGACAGACAGAAGCACCCATGGGACCCAGCAAACAAGAACCCAGGTaGGGCCGGCTGTCCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: QQRAKRPWRQTEAPMGPSKQEPR*GRLSCP Trigger: TGGGCAGGACAGCCGGCCCCACCTGGGTTCTTGTTT...GCTGGGTCCCATGGGTGCTTCTGTCTGTCGCCAGGGCCTCTTGGCTCTCTGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGCAGAGAGCCAAGAGGCCCTGGCGACAGACAGAAGCACCCATGGGACCCTCCTGCCCAACCCTCTaGAAGACAGCCAGCACTGTG | + |
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Preference number: 2 (lower is better) Translates to: SQQRAKRPWRQTEAPMGPSCPTL*KTASTV Trigger: CACAGTGCTGGCTGTCTTCCAGAGGGTTGGGCAGGA...GGGTCCCATGGGTGCTTCTGTCTGTCGCCAGGGCCTCTTGGCTCTCTGCTGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGGGAGAGTTGAGGAGACAGACCAAGTCCCCAGAGGCACCACCTGTGCAGGAGGGCCTGGCTCCCTaGAGACAATGCCACCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: PVGELRRQTKSPEAPPVQEGLAP*RQCHPL Trigger: CAAGGGGTGGCATTGTCTCCAGGGAGCCAGGCCCTC...CTGCACAGGTGGTGCCTCTGGGGACTTGGTCTGTCTCCTCAACTCTCCCACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGCAGAGAGCCAAGAGGCCCTGGCGACAGACAGAAGCACCCATGGGACCCAGGGAGGGGCCAGGGTaGAATCTGTTCATAGGATGC | + |
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Preference number: 2 (lower is better) Translates to: SQQRAKRPWRQTEAPMGPREGPG*NLFIGC Trigger: GCATCCTATGAACAGATTTCACCCTGGCCCCTCCCT...GGGTCCCATGGGTGCTTCTGTCTGTCGCCAGGGCCTCTTGGCTCTCTGCTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGGGAGAGTTGAGGAGACAGACCAAGTCCCCAGAGGCACCACCTGTGCAGAAACTGGGAGGAAGCTaGGTCCCAGGCCAGGACCGA | + |
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Preference number: 2 (lower is better) Translates to: PVGELRRQTKSPEAPPVQKLGGS*VPGQDR Trigger: TCGGTCCTGGCCTGGGACCCAGCTTCCTCCCAGTTT...CTGCACAGGTGGTGCCTCTGGGGACTTGGTCTGTCTCCTCAACTCTCCCACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | AGACAGACCAAGTCCCCAGAGGCACCACCTGTGCAGACAGCTGAGCTCAGGAGACACAGCCAAGTGCCCTaGCCCCTGAGCCAGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: RQTKSPEAPPVQTAELRRHSQVP*PLSQQR Trigger: TCTCTGCTGGCTCAGGGGCCAGGGCACTTGGCTGTG...TCTCCTGAGCTCAGCTGTCTGCACAGGTGGTGCCTCTGGGGACTTGGTCTGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | AGACAGACCAAGTCCCCAGAGGCACCACCTGTGCAGACAGCTGAGCTCAGGAGAGAGGGCCTGGCTCCCTaGAGACAATGCCACCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: RQTKSPEAPPVQTAELRREGLAP*RQCHPL Trigger: CAAGGGGTGGCATTGTCTCCAGGGAGCCAGGCCCTC...TCTCCTGAGCTCAGCTGTCTGCACAGGTGGTGCCTCTGGGGACTTGGTCTGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | TGCGAGGGCCTGGCTCCCTGGAGACAATGCCACCCCTTGCAGCCAACAGTAACATCCAGGCCAGGAGCCTaGGGGACCTATCCAGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: CEGLAPWRQCHPLQPTVTSRPGA*GTYPVQ Trigger: TTGAACTGGATAGGTCCCCCAGGCTCCTGGCCTGGA...TGTTACTGTTGGCTGCAAGGGGTGGCATTGTCTCCAGGGAGCCAGGCCCTCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR TCA 90 bp | GCCCTGCTTCTGCCCGGGCTCACCTACAAAGCTGGACACAGTCCTGACTTAGCTAGAAGTAAGTGCCTCTaGCCCCAGGGGCACAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: ALLLPGLTYKAGHSPDLARSKCL*PQGHRS Trigger: AGACCTGTGCCCCTGGGGTCAGAGGCACTTACTTCT...AGCTAAGTCAGGACTGTGTCCAGCTTTGTAGGTGAGCCCGGGCAGAAGCAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR TCA 90 bp | AGACAGACCAAGTCCCCAGAGGCACCACCTGTGCAGACAGCTGAGCTCAGGAGAAGAAGTAAGTGCCTCTaGCCCCAGGGGCACAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: RQTKSPEAPPVQTAELRRRSKCL*PQGHRS Trigger: AGACCTGTGCCCCTGGGGTCAGAGGCACTTACTTCT...TCTCCTGAGCTCAGCTGTCTGCACAGGTGGTGCCTCTGGGGACTTGGTCTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR TCA 90 bp | TGCGAGGGCCTGGCTCCCTGGAGACAATGCCACCCCTTGCAGCCAACAGTAACAAGGGAGGGGCCAGGGTaGAATCTGTTCATAGGATGC | + |
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Preference number: 2 (lower is better) Translates to: CEGLAPWRQCHPLQPTVTREGPG*NLFIGC Trigger: GCATCCTATGAACAGATTTCACCCTGGCCCCTCCCT...TGTTACTGTTGGCTGCAAGGGGTGGCATTGTCTCCAGGGAGCCAGGCCCTCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR TCA 90 bp | TCTGTACTTCAAAGAAAAACCCACAGCCAAGTGCCCTGGCCCCTGAGCCAGCAGCCTGTCTCCTCCAGGTaGAACTGGGAGGAAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SVLQRKTHSQVPWPLSQQPVSSR*NWEEAG Trigger: CCCAGCTTCCTCCCAGTTTCACCTGGAGGAGACAGG...CTGCTGGCTCAGGGGCCAGGGCACTTGGCTGTGGGTTTTTCTTTGAAGTACAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR TCA 90 bp | ACTCTCCTAGCCCCAGAATCAGCTGGTGTTCACCTTGTGCTTTGGGGAGAGGGAACCTGTGCAGACAGCTaGGCTCAGGAGACAGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: TLLAPESAGVHLVLWGEGTCADS*AQETEG Trigger: GCCCTCTGTCTCCTGAGCTCAGCTGTCTGCACAGGT...TCCCTCTCCCCAAAGCACAAGGTGAACACCAGCTGATTCTGGGGCTAGGAGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | TCTGTACTTCAAAGAAAAACCCACAGCCAAGTGCCCTGGCCCCTGAGCCAGCAGACTGGTCACCTGCAGTaGCTAGGGACAGTGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SVLQRKTHSQVPWPLSQQTGHLQ*LGTVPG Trigger: CCCAGGCACTGTCCCTAGCCACTGCAGGTGACCAGT...CTGCTGGCTCAGGGGCCAGGGCACTTGGCTGTGGGTTTTTCTTTGAAGTACAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR GCA 90 bp | ACTCTCCTAGCCCCAGAATCAGCTGGTGTTCACCTTGTGCTTTGGGGAGAGGGACAGAGGCACCACCTGTaGAGACAGCTGAGCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: TLLAPESAGVHLVLWGEGQRHHL*RQLSSG Trigger: TCCTGAGCTCAGCTGTCTGCACAGGTGGTGCCTCTG...TCCCTCTCCCCAAAGCACAAGGTGAACACCAGCTGATTCTGGGGCTAGGAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | ATTGATAACTCTCCTAGCCCCAGAATCAGCTGGTGTTCACCTTGTGCTTTGGGGAAACCCTGGGCCCCATaGGCCTGTGGCCAGCTTCGG | + |
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Preference number: 2 (lower is better) Translates to: IDNSPSPRISWCSPCALGKPWAP*ACGQLR Trigger: CCGAAGCTGGCCACAGGCCCATGGGGCCCAGGGTTT...CCCCAAAGCACAAGGTGAACACCAGCTGATTCTGGGGCTAGGAGAGTTATCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | ATAACTCTCCTAGCCCCAGAATCAGCTGGTGTTCACCTTGTGCTTTGGGGAGAGTCTCCTGCGAGGGCCTaGCTCCCTGGAGACAATGCC | + |
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Preference number: 2 (lower is better) Translates to: ITLLAPESAGVHLVLWGESPARA*LPGDNA Trigger: GGCATTGTCTCCAGGGAGCCAGGCCCTCGCAGGAGA...CTCTCCCCAAAGCACAAGGTGAACACCAGCTGATTCTGGGGCTAGGAGAGTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGCATGGAATCAGTCGGAGGCCTGTCTCCTCCAGGTGAAACTGGGAGGAAGCCAAGCTTTAGATCCTTaGGAGGCACCAGGTAAACCC | + |
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Preference number: 2 (lower is better) Translates to: QAWNQSEACLLQVKLGGSQALDP*EAPGKP Trigger: GGGTTTACCTGGTGCCTCTCAAGGATCTAAAGCTTG...GCTTCCTCCCAGTTTCACCTGGAGGAGACAGGCCTCCGACTGATTCCATGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR TCA 90 bp | ATAACTCTCCTAGCCCCAGAATCAGCTGGTGTTCACCTTGTGCTTTGGGGAGAGCCTGTCTCCTCCAGGTaGAACTGGGAGGAAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: ITLLAPESAGVHLVLWGEPVSSR*NWEEAG Trigger: CCCAGCTTCCTCCCAGTTTCACCTGGAGGAGACAGG...CTCTCCCCAAAGCACAAGGTGAACACCAGCTGATTCTGGGGCTAGGAGAGTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR GCA 90 bp | TTGATAACTCTCCTAGCCCCAGAATCAGCTGGTGTTCACCTTGTGCTTTGGGGATGGGGCCGGCTGTCCTaGCCAACCCTCTGGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: LITLLAPESAGVHLVLWGWGRLS*PTLWKT Trigger: TGTCTTCCAGAGGGTTGGGCAGGACAGCCGGCCCCA...TCCCCAAAGCACAAGGTGAACACCAGCTGATTCTGGGGCTAGGAGAGTTATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | ATAACTCTCCTAGCCCCAGAATCAGCTGGTGTTCACCTTGTGCTTTGGGGAGAGAAACAAGAACCCAGGTaGGGCCGGCTGTCCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: ITLLAPESAGVHLVLWGEKQEPR*GRLSCP Trigger: TGGGCAGGACAGCCGGCCCCACCTGGGTTCTTGTTT...CTCTCCCCAAAGCACAAGGTGAACACCAGCTGATTCTGGGGCTAGGAGAGTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR TCA 90 bp | ATTGATAACTCTCCTAGCCCCAGAATCAGCTGGTGTTCACCTTGTGCTTTGGGGCAGCCAGCACTGTGGTaGGAGAGAAGTAGGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: IDNSPSPRISWCSPCALGQPALW*ERSRPS Trigger: ACTGGGCCTACTTCTCTCTCACCACAGTGCTGGCTG...CCCCAAAGCACAAGGTGAACACCAGCTGATTCTGGGGCTAGGAGAGTTATCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR TCA 90 bp | GTGGAAGACAGTAGCCTCTGTACTTCAAAGAAAAACCCACAGCCAAGTGCCCTGCAGCCAGCACTGTGGTaGGAGAGAAGTAGGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: VEDSSLCTSKKNPQPSALQPALW*ERSRPS Trigger: ACTGGGCCTACTTCTCTCTCACCACAGTGCTGGCTG...CAGGGCACTTGGCTGTGGGTTTTTCTTTGAAGTACAGAGGCTACTGTCTTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | ATTGATAACTCTCCTAGCCCCAGAATCAGCTGGTGTTCACCTTGTGCTTTGGGGTCCAGGCCAGGAGCCTaGGGGACCTATCCAGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: IDNSPSPRISWCSPCALGSRPGA*GTYPVQ Trigger: TTGAACTGGATAGGTCCCCCAGGCTCCTGGCCTGGA...CCCCAAAGCACAAGGTGAACACCAGCTGATTCTGGGGCTAGGAGAGTTATCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | ACAAAAGTGGCAGGGGTGAGACTGGACTACTTAACTTCACTGGTGGAAGACAGTAAACTGGGAGGAAGCTaGGTCCCAGGCCAGGACCGA | + |
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Preference number: 2 (lower is better) Translates to: TKVAGVRLDYLTSLVEDSKLGGS*VPGQDR Trigger: TCGGTCCTGGCCTGGGACCCAGCTTCCTCCCAGTTT...ACTGTCTTCCACCAGTGAAGTTAAGTAGTCCAGTCTCACCCCTGCCACTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | GCCAACAGTAACAAAAGTGGCAGGGGTGAGACTGGACTACTTAACTTCACTGGTACTGGTCACCTGCAGTaGCTAGGGACAGTGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: ANSNKSGRGETGLLNFTGTGHLQ*LGTVPG Trigger: CCCAGGCACTGTCCCTAGCCACTGCAGGTGACCAGT...ACCAGTGAAGTTAAGTAGTCCAGTCTCACCCCTGCCACTTTTGTTACTGTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| 3UTR-3UTR CCA 90 bp | ATAACTCTCCTAGCCCCAGAATCAGCTGGTGTTCACCTTGTGCTTTGGGGAGAGATAGGATGCAGCGATTaGAGTGTCCCCTCAGGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: ITLLAPESAGVHLVLWGEIGCSD*SVPSGQ Trigger: CTGCCCTGAGGGGACACTCCAATCGCTGCATCCTAT...CTCTCCCCAAAGCACAAGGTGAACACCAGCTGATTCTGGGGCTAGGAGAGTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR CCA 72 bp | CCCTGGCCCCTGAGCCAGCAGAGAGCCAAGAGGCCCTaGCGACAGACAGAAGCACCCATGGGACCCAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PWPLSQQRAKRP*RQTEAPMGPSH Trigger: GTGGCTGGGTCCCATGGGTGCTTCTGTCTGTCGCCAGGGCCTCTTGGCTCTCTGCTGGCTCAGGGGCCAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR GCA 72 bp | CCAGGCCAGGACCGAGGTCAGGGGAGGCCCTGCTTCTaGCCGGGCTCACCTACAAAGCTGGACACAGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PGQDRGQGRPCF*PGSPTKLDTVL Trigger: CAGGACTGTGTCCAGCTTTGTAGGTGAGCCCGGGCAGAAGCAGGGCCTCCCCTGACCTCGGTCCTGGCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR CCA 72 bp | GTAGGCCCAGTCCTGAGGCCCACTGGTCACCTGCAGTaGCTAGGGACAGTGCCTGGGCTCTCCCTGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VGPVLRPTGHLQ*LGTVPGLSLLQ Trigger: CTGCAGCAGGGAGAGCCCAGGCACTGTCCCTAGCCACTGCAGGTGACCAGTGGGCCTCAGGACTGGGCCTAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR CCA 72 bp | AGTCAGCTAGGCGCCCGTGTGTCTCCTGCGAGGGCCTaGCTCCCTGGAGACAATGCCACCCCTTGCAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SQLGARVSPARA*LPGDNATPCSQ Trigger: TTGGCTGCAAGGGGTGGCATTGTCTCCAGGGAGCCAGGCCCTCGCAGGAGACACACGGGCGCCTAGCTGACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGGGCCCCATGGGCCTGTGGCCAGCTTCGGGGCTGTCAAGGTCACACAGGCCTAGAAACCAGCTCCTaGGGCTCTAGAAGCACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PWAPWACGQLRGCQGHTGLETSS*GSRSTL Trigger: GAGGGTGCTTCTAGAGCCCAAGGAGCTGGTTTCTAG...GCCTGTGTGACCTTGACAGCCCCGAAGCTGGCCACAGGCCCATGGGGCCCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR CCA 72 bp | GCCCACTGGTCACCTGCAGTGGCTAGGGACAGTGCCTaGGCTCTCCCTGCTGCAGGCATGGAATCAGTCGGA | + |
|
Preference number: 3 (lower is better) Translates to: AHWSPAVARDSA*ALPAAGMESVG Trigger: TCCGACTGATTCCATGCCTGCAGCAGGGAGAGCCCAGGCACTGTCCCTAGCCACTGCAGGTGACCAGTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR CCA 72 bp | AGGCGCCCGTGTGTCTCCTGCGAGGGCCTGGCTCCCTaGAGACAATGCCACCCCTTGCAGCCAACAGTAACA | + |
|
Preference number: 3 (lower is better) Translates to: RRPCVSCEGLAP*RQCHPLQPTVT Trigger: TGTTACTGTTGGCTGCAAGGGGTGGCATTGTCTCCAGGGAGCCAGGCCCTCGCAGGAGACACACGGGCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR-3UTR CAA 90 bp | GCCAAGTCAGGGCCAAGTCAGCTAGGCGCCCGTGTGTCTCCTGCGAGGGCCTGGCTAGAAACCAGCTCCTaGGGCTCTAGAAGCACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: AKSGPSQLGARVSPARAWLETSS*GSRSTL Trigger: GAGGGTGCTTCTAGAGCCCAAGGAGCTGGTTTCTAG...CCAGGCCCTCGCAGGAGACACACGGGCGCCTAGCTGACTTGGCCCTGACTTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR TCA 72 bp | TCTGCCCGGGCTCACCTACAAAGCTGGACACAGTCCTaGCTTAGCTGGTTCCAGGCCAGGAGCCTGGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SARAHLQSWTQS*LSWFQARSLGD Trigger: GTCCCCCAGGCTCCTGGCCTGGAACCAGCTAAGTCAGGACTGTGTCCAGCTTTGTAGGTGAGCCCGGGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR TCA 72 bp | CCTGCCCAACCCTCTGGAAGACAGCCAGCACTGTGGTaGGAGAGAAGTAGGCCCAGTCCTGAGGCCCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: PAQPSGRQPALW*ERSRPSPEAHW Trigger: CCAGTGGGCCTCAGGACTGGGCCTACTTCTCTCTCACCACAGTGCTGGCTGTCTTCCAGAGGGTTGGGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR GCA 72 bp | GACTGTAAACAAGAACCCAGGTGGGGCCGGCTGTCCTaGCCAACCCTCTGGAAGACAGCCAGCACTGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: DCKQEPRWGRLS*PTLWKTASTVV Trigger: CACCACAGTGCTGGCTGTCTTCCAGAGGGTTGGGCAGGACAGCCGGCCCCACCTGGGTTCTTGTTTACAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR CCA 72 bp | CTAGGGACAGTGCCTGGGCTCTCCCTGCTGCAGGCATaGAATCAGTCGGAGGCCTGTCTCCTCCAGGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LGTVPGLSLLQA*NQSEACLLQVK Trigger: TTTCACCTGGAGGAGACAGGCCTCCGACTGATTCCATGCCTGCAGCAGGGAGAGCCCAGGCACTGTCCCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR CCA 72 bp | CAGGGCACTGAGGAGGACTGTAAACAAGAACCCAGGTaGGGCCGGCTGTCCTGCCCAACCCTCTGGAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: QGTEEDCKQEPR*GRLSCPTLWKT Trigger: TGTCTTCCAGAGGGTTGGGCAGGACAGCCGGCCCCACCTGGGTTCTTGTTTACAGTCCTCCTCAGTGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR GCA 72 bp | TGTGTCTCCTGCGAGGGCCTGGCTCCCTGGAGACAATaGCACCCCTTGCAGCCAACAGTAACAAAAGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CVSCEGLAPWRQ*HPLQPTVTKVA Trigger: TGCCACTTTTGTTACTGTTGGCTGCAAGGGGTGGCATTGTCTCCAGGGAGCCAGGCCCTCGCAGGAGACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR GCA 72 bp | AGAGGGAACAACTCTGCCCTTGTCTCCCCCACCTCCTaGCCCGTACCTTTAGAGTTTGTAAGCCCGTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RGNNSALVSPTS*PVPLEFVSPSQ Trigger: CTGGGACGGGCTTACAAACTCTAAAGGTACGGGGCAGGAGGTGGGGGAGACAAGGGCAGAGTTGTTCCCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR CCA 72 bp | GGGACCTATCCAGTTCAAGTCCCACATTCCACCTACTaGTGTAGGCCCACAGCAGCCCAGACAGCAGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GTYPVQVPHSTY*CRPTAAQTAAS Trigger: GGAAGCTGCTGTCTGGGCTGCTGTGGGCCTACACCAGTAGGTGGAATGTGGGACTTGAACTGGATAGGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR CCA 72 bp | CACAGTCCTGACTTAGCTGGTTCCAGGCCAGGAGCCTaGGGGACCTATCCAGTTCAAGTCCCACATTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: HSPDLAGSRPGA*GTYPVQVPHST Trigger: GGTGGAATGTGGGACTTGAACTGGATAGGTCCCCCAGGCTCCTGGCCTGGAACCAGCTAAGTCAGGACTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR CCA 72 bp | TCTGTACTTCAAAGAAAAACCCACAGCCAAGTGCCCTaGCCCCTGAGCCAGCAGAGAGCCAAGAGGCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SVLQRKTHSQVP*PLSQQRAKRPW Trigger: CCAGGGCCTCTTGGCTCTCTGCTGGCTCAGGGGCCAGGGCACTTGGCTGTGGGTTTTTCTTTGAAGTACAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR CCA 72 bp | CTAGCCCCAGAATCAGCTGGTGTTCACCTTGTGCTTTaGGGAGAGGGAACAACTCTGCCCTTGTCTCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LAPESAGVHLVL*GEGTTLPLSPP Trigger: TGGGGGAGACAAGGGCAGAGTTGTTCCCTCTCCCCAAAGCACAAGGTGAACACCAGCTGATTCTGGGGCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR TCA 72 bp | TTCACGTTCCAGATTCTTCTCAGAAGTAAGTGCCTCTaGCCCCAGGGGCACAGGTCTCCTGAGTCATATGTC | + |
|
Preference number: 3 (lower is better) Translates to: FTFQILLRSKCL*PQGHRSPESYV Trigger: GACATATGACTCAGGAGACCTGTGCCCCTGGGGTCAGAGGCACTTACTTCTGAGAAGAATCTGGAACGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR CCA 90 bp | GCCAAGTCAGGGCCAAGTCAGCTAGGCGCCCGTGTGTCTCCTGCGAGGGCCTGGAGGGGACCTCTAAGCTaGCTAGGCCAGCCTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AKSGPSQLGARVSPARAWRGPLS*LGQPGL Trigger: GAGGCCAGGCTGGCCTAGCCAGCTTAGAGGTCCCCT...CCAGGCCCTCGCAGGAGACACACGGGCGCCTAGCTGACTTGGCCCTGACTTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR GCA 90 bp | CCGAGGTCAGGGGAGGCCCTGCTTCTGCCCGGGCTCACCTACAAAGCTGGACACCGGGGCATCGCAGGTTaGGTAGAAGGCCAAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PRSGEALLLPGLTYKAGHRGIAG*VEGQAA Trigger: CGCAGCTTGGCCTTCTACGCAACCTGCGATGCCCCG...GTGTCCAGCTTTGTAGGTGAGCCCGGGCAGAAGCAGGGCCTCCCCTGACCTCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR TCA 90 bp | CCTGAGGCCCACTGGTCACCTGCAGTGGCTAGGGACAGTGCCTGGGCTCTCCCTGGCTGGTCCTGGGTCTaGGTCTCAGCAGAACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PEAHWSPAVARDSAWALPGWSWV*VSAEPG Trigger: TCCTGGTTCTGCTGAGACTCAGACCCAGGACCAGCC...AGGGAGAGCCCAGGCACTGTCCCTAGCCACTGCAGGTGACCAGTGGGCCTCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR GCA 90 bp | CAGCAGAGAGCCAAGAGGCCCTGGCGACAGACAGAAGCACCCATGGGACCCAGCCCAGCGGCTCGCGGCTaGCTTCTGCCTCGAAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QQRAKRPWRQTEAPMGPSPAARG*LLPRSK Trigger: TTTACTTCGAGGCAGAAGGCAGCCGCGAGCCGCTGG...GCTGGGTCCCATGGGTGCTTCTGTCTGTCGCCAGGGCCTCTTGGCTCTCTGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGGACACAGTCCTGACTTAGCTGGTTCCAGGCCAGGAGCCTGGGGGACCAGGGGACCTCTAAGCTaGCTAGGCCAGCCTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAGHSPDLAGSRPGAWGTRGPLS*LGQPGL Trigger: GAGGCCAGGCTGGCCTAGCCAGCTTAGAGGTCCCCT...GGTCCCCCAGGCTCCTGGCCTGGAACCAGCTAAGTCAGGACTGTGTCCAGCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR TCA 90 bp | GTGGAAGACAGTAGCCTCTGTACTTCAAAGAAAAACCCACAGCCAAGTGCCCTGAGTGGCGGCGGCCGCTaGGGGGCTACCGAGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VEDSSLCTSKKNPQPSALSGGGR*GATEGC Trigger: GCAGCCCTCGGTAGCCCCTCAGCGGCCGCCGCCACT...CAGGGCACTTGGCTGTGGGTTTTTCTTTGAAGTACAGAGGCTACTGTCTTCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR GCA 90 bp | GTCACACAGGCCACCCTGGCGCGGAGTTCTCTAGAAACCAGCTCCTTGGGCTCTCCAGCGGCTCGCGGCTaGCTTCTGCCTCGAAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VTQATLARSSLETSSLGSPAARG*LLPRSK Trigger: TTTACTTCGAGGCAGAAGGCAGCCGCGAGCCGCTGG...AGAGCCCAAGGAGCTGGTTTCTAGAGAACTCCGCGCCAGGGTGGCCTGTGTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR TCA 90 bp | GCCAACAGTAACAAAAGTGGCAGGGGTGAGACTGGACTACTTAACTTCACTGGTAGTGGCGGCGGCCGCTaGGGGGCTACCGAGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ANSNKSGRGETGLLNFTGSGGGR*GATEGC Trigger: GCAGCCCTCGGTAGCCCCTCAGCGGCCGCCGCCACT...ACCAGTGAAGTTAAGTAGTCCAGTCTCACCCCTGCCACTTTTGTTACTGTTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR CAA 72 bp | GCCACCCTGGCGCGGAGTTCTCTAGAAACCAGCTCCTaGGGCTCTAGAAGCACCCTCAGGTTCACGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATLARSSLETSS*GSRSTLRFTFQ Trigger: CTGGAACGTGAACCTGAGGGTGCTTCTAGAGCCCAAGGAGCTGGTTTCTAGAGAACTCCGCGCCAGGGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGGACACAGTCCTGACTTAGCTGGTTCCAGGCCAGGAGCCTGGGGGACCCCTGGGAGCCTGGATTaGAAACAGGCCATTCTACGG | + |
|
Preference number: 4 (lower is better) Translates to: KAGHSPDLAGSRPGAWGTPGSLD*KQAILR Trigger: CCGTAGAATGGCCTGTTTGCAATCCAGGCTCCCAGG...GGTCCCCCAGGCTCCTGGCCTGGAACCAGCTAAGTCAGGACTGTGTCCAGCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR GCA 90 bp | ATAACTCTCCTAGCCCCAGAATCAGCTGGTGTTCACCTTGTGCTTTGGGGAGAGCCCGGCAAAGCGCACTaGGAAGGCGAACTCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ITLLAPESAGVHLVLWGEPGKAH*EGELLP Trigger: CGGGAGGAGTTCGCCTTCGCAGTGCGCTTTGCCGGG...CTCTCCCCAAAGCACAAGGTGAACACCAGCTGATTCTGGGGCTAGGAGAGTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| 3UTR CAA 72 bp | AGTCTACACCTCAGCCGTATGACTCCAGTGGGAGAGTaGAGGAGACAGACCAAGTCCCCAGAGGCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SLHLSRMTPVGE*RRQTKSPEAPP Trigger: AGGTGGTGCCTCTGGGGACTTGGTCTGTCTCCTCAACTCTCCCACTGGAGTCATACGGCTGAGGTGTAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR GCA 90 bp | GCCAACAGTAACAAAAGTGGCAGGGGTGAGACTGGACTACTTAACTTCACTGGTCGGGGCATCGCAGGTTaGGTAGAAGGCCAAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: ANSNKSGRGETGLLNFTGRGIAG*VEGQAA Trigger: CGCAGCTTGGCCTTCTACGCAACCTGCGATGCCCCG...ACCAGTGAAGTTAAGTAGTCCAGTCTCACCCCTGCCACTTTTGTTACTGTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR TCA 90 bp | ACAAAAGTGGCAGGGGTGAGACTGGACTACTTAACTTCACTGGTGGAAGACAGTGGCTGGTCCTGGGTCTaGGTCTCAGCAGAACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TKVAGVRLDYLTSLVEDSGWSWV*VSAEPG Trigger: TCCTGGTTCTGCTGAGACTCAGACCCAGGACCAGCC...ACTGTCTTCCACCAGTGAAGTTAAGTAGTCCAGTCTCACCCCTGCCACTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR GCA 90 bp | ATTGATAACTCTCCTAGCCCCAGAATCAGCTGGTGTTCACCTTGTGCTTTGGGGCCTGGGAGCCTGGATTaGAAACAGGCCATTCTACGG | + |
|
Preference number: 4 (lower is better) Translates to: IDNSPSPRISWCSPCALGPGSLD*KQAILR Trigger: CCGTAGAATGGCCTGTTTGCAATCCAGGCTCCCAGG...CCCCAAAGCACAAGGTGAACACCAGCTGATTCTGGGGCTAGGAGAGTTATCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS GCA 90 bp | GCAGCTGGGCGAAGGATGCCAAGGGCCCGTTGGCCGCTGAGGCCCTaGGGCGGGGTGGCAGTGGCGGCGGCCGCTGAGGGGCTACCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAGRRMPRARWPLRP*GGVAVAAAAEGLPR Trigger: CCTCGGTAGCCCCTCAGCGGCCGCCGCCACTGCCACCCCGCCGCAGGGCCTCAGCGGCCAACGGGCCCTTGGCATCCTTCGCCCAGCTGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS GCA 90 bp | AGCGGCCAGCACGTACGGCCGGGATCGGCCCCCGGCAAAGCGCACTaGGAAGGCGAACTCCTCCCGGGCATCCACCAGCTCCACCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGQHVRPGSAPGKAH*EGELLPGIHQLHRA Trigger: TGCACGGTGGAGCTGGTGGATGCCCGGGAGGAGTTCGCCTTCGCAGTGCGCTTTGCCGGGGGCCGATCCCGGCCGTACGTGCTGGCCGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056654.8 ENSMUST00000198155.2 ENSMUST00000198271.5 |
||
| CDS-3UTR CAA 90 bp | CCCTGGGCCCCATGGGCCTGTGGCCAGCTTCGGGGCTGTCAAGGTCACACAGGCGCGCATGGCAGCCAGTaGCTGTTCCAGCTCCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PWAPWACGQLRGCQGHTGAHGSQ*LFQLPH Trigger: GTGCGGGAGCTGGAACAGCAACTGGCTGCCATGCGC...GCCTGTGTGACCTTGACAGCCCCGAAGCTGGCCACAGGCCCATGGGGCCCAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS CCA 90 bp | GGCTCGGGTTGGCGGGTAAGGCGTTGGCGGGGCTTCCCTCGCGCATaGCAGCCAGTTGCTGTTCCAGCTCCCGCACCACCAAGCGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GSGWRVRRWRGFPRA*QPVAVPAPAPPSAD Trigger: ATCTGCGCTTGGTGGTGCGGGAGCTGGAACAGCAACTGGCTGCCATGCGCGAGGGAAGCCCCGCCAACGCCTTACCCGCCAACCCGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR CAA 90 bp | CAGTTCAAGTCCCACATTCCACCTACTGGTGTAGGCCCACAGCAGCCCAGACAGCCGGGGCATCGCAGGTaGCGTAGAAGGCCAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QFKSHIPPTGVGPQQPRQPGHRR*RRRPSC Trigger: GCAGCTTGGCCTTCTACGCAACCTGCGATGCCCCGG...CTGTCTGGGCTGCTGTGGGCCTACACCAGTAGGTGGAATGTGGGACTTGAACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR CAA 90 bp | TCTGTACTTCAAAGAAAAACCCACAGCCAAGTGCCCTGGCCCCTGAGCCAGCAGTACAGGAAGCCGGCGTaGTCCACCGGGGCATCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVLQRKTHSQVPWPLSQQYRKPA*STGASQ Trigger: CTGCGATGCCCCGGTGGACAACGCCGGCTTCCTGTA...CTGCTGGCTCAGGGGCCAGGGCACTTGGCTGTGGGTTTTTCTTTGAAGTACAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR CAA 90 bp | CCAGTGGGAGAGTTGAGGAGACAGACCAAGTCCCCAGAGGCACCACCTGTGCAGACCCAGCCGTTCTCCTaGGGTCTCTGGGTCAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: PVGELRRQTKSPEAPPVQTQPFS*GLWVKT Trigger: GGTTTTGACCCAGAGACCCAAGGAGAACGGCTGGGT...CTGCACAGGTGGTGCCTCTGGGGACTTGGTCTGTCTCCTCAACTCTCCCACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR CAA 90 bp | TTGATAACTCTCCTAGCCCCAGAATCAGCTGGTGTTCACCTTGTGCTTTGGGGACCGGGGCATCGCAGGTaGCGTAGAAGGCCAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LITLLAPESAGVHLVLWGPGHRR*RRRPSC Trigger: GCAGCTTGGCCTTCTACGCAACCTGCGATGCCCCGG...TCCCCAAAGCACAAGGTGAACACCAGCTGATTCTGGGGCTAGGAGAGTTATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR CAA 90 bp | GCCAACAGTAACAAAAGTGGCAGGGGTGAGACTGGACTACTTAACTTCACTGGTTACAGGAAGCCGGCGTaGTCCACCGGGGCATCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ANSNKSGRGETGLLNFTGYRKPA*STGASQ Trigger: CTGCGATGCCCCGGTGGACAACGCCGGCTTCCTGTA...ACCAGTGAAGTTAAGTAGTCCAGTCTCACCCCTGCCACTTTTGTTACTGTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS-3UTR CAA 90 bp | GTGGAAGACAGTAGCCTCTGTACTTCAAAGAAAAACCCACAGCCAAGTGCCCTGACCCAGCCGTTCTCCTaGGGTCTCTGGGTCAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: VEDSSLCTSKKNPQPSALTQPFS*GLWVKT Trigger: GGTTTTGACCCAGAGACCCAAGGAGAACGGCTGGGT...CAGGGCACTTGGCTGTGGGTTTTTCTTTGAAGTACAGAGGCTACTGTCTTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
||
| CDS TCA 72 bp | CAGCTGGGCGAAGGATGCCAAGGGCCCGTTGGCCGCTaGGGCCCTGCGGCGGGGTGGCAGTGGCGGCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: QLGEGCQGPVGR*GPAAGWQWRRP Trigger: CGGCCGCCGCCACTGCCACCCCGCCGCAGGGCCTCAGCGGCCAACGGGCCCTTGGCATCCTTCGCCCAGCTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| CDS GCA 72 bp | CGAAGGATGCCAAGGGCCCGTTGGCCGCTGAGGCCCTaGGGCGGGGTGGCAGTGGCGGCGGCCGCTGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: RRMPRARWPLRP*GGVAVAAAAEG Trigger: CCCCTCAGCGGCCGCCGCCACTGCCACCCCGCCGCAGGGCCTCAGCGGCCAACGGGCCCTTGGCATCCTTCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| CDS CAA 72 bp | CGCGCATGCAGCTGGGCGAAGGATGCCAAGGGCCCGTaGGCCGCTGAGGCCCTGCGGCGGGGTGGCAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: RACSWAKDAKGP*AAEALRRGGSG Trigger: GCCACTGCCACCCCGCCGCAGGGCCTCAGCGGCCAACGGGCCCTTGGCATCCTTCGCCCAGCTGCATGCGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| CDS CAA 72 bp | CAGCGCCGGTGCGAGCCGGTCCCACGGCCACCACGCTaGTACAGGAAGCCGGCGTTGTCCACCGGGGCATCG | + |
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Preference number: 6 (lower is better) Translates to: QRRCEPVPRPPR*YRKPALSTGAS Trigger: CGATGCCCCGGTGGACAACGCCGGCTTCCTGTACAAGCGTGGTGGCCGTGGGACCGGCTCGCACCGGCGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056654.8 ENSMUST00000198155.2 ENSMUST00000198271.5 |
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| CDS GCA 72 bp | CACGTACGGCCGGGATCGGCCCCCGGCAAAGCGCACTaGGAAGGCGAACTCCTCCCGGGCATCCACCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: HVRPGSAPGKAH*EGELLPGIHQL Trigger: GAGCTGGTGGATGCCCGGGAGGAGTTCGCCTTCGCAGTGCGCTTTGCCGGGGGCCGATCCCGGCCGTACGTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056654.8 ENSMUST00000198155.2 ENSMUST00000198271.5 |
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| CDS CAA 90 bp | AGCACGAACCAGCGCCGGTGCGAGCCGGTCCCACGGCCACCACGCTaGTACAGGAAGCCGGCGTTGTCCACCGGGGCATCGCAGGTTGCG | + |
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Preference number: 6 (lower is better) Translates to: STNQRRCEPVPRPPR*YRKPALSTGASQVA Trigger: CGCAACCTGCGATGCCCCGGTGGACAACGCCGGCTTCCTGTACAAGCGTGGTGGCCGTGGGACCGGCTCGCACCGGCGCTGGTTCGTGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056654.8 ENSMUST00000198155.2 ENSMUST00000198271.5 |
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| CDS CCA 72 bp | TGGCGGGTAAGGCGTTGGCGGGGCTTCCCTCGCGCATaGCAGCCAGTTGCTGTTCCAGCTCCCGCACCACCA | + |
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Preference number: 6 (lower is better) Translates to: WRVRRWRGFPRA*QPVAVPAPAPP Trigger: TGGTGGTGCGGGAGCTGGAACAGCAACTGGCTGCCATGCGCGAGGGAAGCCCCGCCAACGCCTTACCCGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| CDS CAA 72 bp | TGGGTCAAAACCGGGCTCGGGTTGGCGGGTAAGGCGTaGGCGGGGCTTCCCTCGCGCATGGCAGCCAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: WVKTGLGLAGKA*AGLPSRMAASC Trigger: GCAACTGGCTGCCATGCGCGAGGGAAGCCCCGCCAACGCCTTACCCGCCAACCCGAGCCCGGTTTTGACCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| CDS GCA 72 bp | AAGAGGATATTGCCCCGGAGCACGAACCAGCGCCGGTaGGAGCCGGTCCCACGGCCACCACGCTTGTACAGG | + |
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Preference number: 6 (lower is better) Translates to: KRILPRSTNQRR*EPVPRPPRLYR Trigger: CCTGTACAAGCGTGGTGGCCGTGGGACCGGCTCGCACCGGCGCTGGTTCGTGCTCCGGGGCAATATCCTCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056654.8 ENSMUST00000198155.2 ENSMUST00000198271.5 |
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| CDS CCA 72 bp | TCTCAGCAGAACCAGGATGCCAGGGGACCTCTAAGCTaGCTAGGCCAGCCTGGCCTCCGCGCCACTGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SQQNQDARGPLS*LGQPGLRATGP Trigger: GGGACCAGTGGCGCGGAGGCCAGGCTGGCCTAGCCAGCTTAGAGGTCCCCTGGCATCCTGGTTCTGCTGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| CDS CAA 72 bp | GGCGTTGGCGGGGCTTCCCTCGCGCATGGCAGCCAGTaGCTGTTCCAGCTCCCGCACCACCAAGCGCAGATA | + |
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Preference number: 6 (lower is better) Translates to: GVGGASLAHGSQ*LFQLPHHQAQI Trigger: TATCTGCGCTTGGTGGTGCGGGAGCTGGAACAGCAACTGGCTGCCATGCGCGAGGGAAGCCCCGCCAACGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| CDS CAA 72 bp | TCGGGCAGCGTGCTCCACACTACCCAGCCGTTCTCCTaGGGTCTCTGGGTCAAAACCGGGCTCGGGTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: SGSVLHTTQPFS*GLWVKTGLGLA Trigger: CGCCAACCCGAGCCCGGTTTTGACCCAGAGACCCAAGGAGAACGGCTGGGTAGTGTGGAGCACGCTGCCCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056654.8 ENSMUST00000198271.5 |
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| CDS GCA 72 bp | CAGGAAGCCGGCGTTGTCCACCGGGGCATCGCAGGTTaGGTAGAAGGCCAAGCTGCGCTCGTTGAGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: QEAGVVHRGIAG*VEGQAALVELH Trigger: ATGAAGCTCAACGAGCGCAGCTTGGCCTTCTACGCAACCTGCGATGCCCCGGTGGACAACGCCGGCTTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056654.8 ENSMUST00000198155.2 ENSMUST00000198271.5 |
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