Pregenerated sensors for PHACTR4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066043Ensembl transcript IDs: ENSMUST00000084170.12, ENSMUST00000084249.11, ENSMUST00000102568.10, ENSMUST00000136711.2, ENSMUST00000152271.8
Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCGGAGCAGGGGCGGAGCAGGGGCGGAGCACCGGCCTTGCTTGTaGGAACTGAGCCTTGGTCAGGATGTAATCGCAAAGGTTAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: GRSRGGAGAEHRPCL*ELSLGQDVIAKVSS Trigger: GCTGCTAACCTTTGCGATTACATCCTGACCAAGGCTCAGTTCTCACAAGCAAGGCCGGTGCTCCGCCCCTGCTCCGCCCCTGCTCCGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR TCA 90 bp | AAGCGCTGCCTGCCCTGCCCAGATCCCAGAGCAGCTCTGGCTGTGTaGGAAGTGCTGTGCTCGCCCTGGAGACAAGAAGCAGACCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: KRCLPCPDPRAALAV*EVLCSPWRQEADQP Trigger: TGGCTGGTCTGCTTCTTGTCTCCAGGGCGAGCACAGCACTTCTCACACAGCCAGAGCTGCTCTGGGATCTGGGCAGGGCAGGCAGCGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR TCA 90 bp | CTGAGAGAAGCCGTTGCTGGCCGGCAGGTATGGTGGGTGCATCTGTaGGCCCTGTACTCGGGAGGTGGAGGCAGGGGATCCTTGGCTACA | + |
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Preference number: 1 (lower is better) Translates to: LREAVAGRQVWWVHL*ALYSGGGGRGSLAT Trigger: TGTAGCCAAGGATCCCCTGCCTCCACCTCCCGAGTACAGGGCTCACAGATGCACCCACCATACCTGCCGGCCAGCAACGGCTTCTCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR GCA 90 bp | GCCTGCCCTGCCCAGATCCCAGAGCAGCTCTGGCTGTGTGAGAAGTaGTGTGCTCGCCCTGGAGACAAGAAGCAGACCAGCCATGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: ACPAQIPEQLWLCEK*CARPGDKKQTSHAF Trigger: AAAAGCATGGCTGGTCTGCTTCTTGTCTCCAGGGCGAGCACAGCACTTCTCACACAGCCAGAGCTGCTCTGGGATCTGGGCAGGGCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR GCA 90 bp | GGAACAGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATaGAGAGAAGTCCAAGCACTTTTCTGGAAGCGGGCCTTTGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: GTGRSLHWLPSGQTL*REVQALFWKRAFAG Trigger: TCCAGCAAAGGCCCGCTTCCAGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR GCA 90 bp | GGCCAACAGCACCAAGGAGTGAGCATGGGCACCTGTAGCGCACAGTaGTCCCACACAGTGCTCCCACAGGCCAAAGTGATTTATAGTATC | + |
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Preference number: 1 (lower is better) Translates to: GQQHQGVSMGTCSAQ*SHTVLPQAKVIYSI Trigger: GATACTATAAATCACTTTGGCCTGTGGGAGCACTGTGTGGGAGCACTGTGCGCTACAGGTGCCCATGCTCACTCCTTGGTGCTGTTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR CCA 90 bp | CCAAATGGAGGGAGGAACAGGCCGGAGCCTGCACTGGCTTCCTTCTaGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTGGAAGCG | + |
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Preference number: 1 (lower is better) Translates to: PNGGRNRPEPALASF*SDLMQRSPSTFLEA Trigger: CGCTTCCAGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTCCTCCCTCCATTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR CCA 90 bp | GATGACAAGTGCCAAATGGAGGGAGGAACAGGCCGGAGCCTGCACTaGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTT | + |
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Preference number: 1 (lower is better) Translates to: DDKCQMEGGTGRSLH*LPSGQTLCREVQAL Trigger: AAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTCCTCCCTCCATTTGGCACTTGTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR GCA 90 bp | AAACATAACCAAATCTGCACCCCAATACAAGTGGGGAGGCCTGGCTaGAACAGGAATGGGAAGGCAAGTGAGGTGTTCGTTGTCGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: KHNQICTPIQVGRPG*NRNGKASEVFVVGR Trigger: CCTCCCGACAACGAACACCTCACTTGCCTTCCCATTCCTGTTGCAGCCAGGCCTCCCCACTTGTATTGGGGTGCAGATTTGGTTATGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR TCA 90 bp | GAGCCACAGGATAAGATCTTGTCTCAAAACAAAAAGGACCTAGGATaGCAAGTGCCAAATGGAGGGAGGAACAGGCCGGAGCCTGCACTG | + |
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Preference number: 1 (lower is better) Translates to: EPQDKILSQNKKDLG*QVPNGGRNRPEPAL Trigger: CAGTGCAGGCTCCGGCCTGTTCCTCCCTCCATTTGGCACTTGTCATCCTAGGTCCTTTTTGTTTTGAGACAAGATCTTATCCTGTGGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR CCA 90 bp | CTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTaGAAGCGGGCCTTTGCTGGAAGGGCTGGTGTGTCCGAATGTTTT | + |
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Preference number: 1 (lower is better) Translates to: LPSGQTLCREVQALF*KRAFAGRAGVSECF Trigger: AAAACATTCGGACACACCAGCCCTTCCAGCAAAGGCCCGCTTCCAGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR CCA 90 bp | CGTAGCCAGAAAAACTCAAAACCTGTAAGAGGCCCTGTGCTTCTGTaGCTGGTGAGAGACACCCTCAAGTCTACTGCAGTGTTGTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: RSQKNSKPVRGPVLL*LVRDTLKSTAVLLK Trigger: TTTTAACAACACTGCAGTAGACTTGAGGGTGTCTCTCACCAGCCACAGAAGCACAGGGCCTCTTACAGGTTTTGAGTTTTTCTGGCTACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR TCA 90 bp | CAGAACTGTTGTTTTCTCTTCCTTTACTCAAGCAATATCAAGGTTTaGGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGAC | + |
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Preference number: 1 (lower is better) Translates to: QNCCFLFLYSSNIKV*GDGDGVGRSLCSID Trigger: GTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATATTGCTTGAGTAAAGGAAGAGAAAACAACAGTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR TCA 90 bp | AGGTTAGCAGCTCTGGCAACCTTGTATCTAGACAACTCACAGACTTaGCAGAACTGTTGTTTTCTCTTCCTTTACTCAAGCAATATCAAG | + |
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Preference number: 1 (lower is better) Translates to: RLAALATLYLDNSQT*QNCCFLFLYSSNIK Trigger: CTTGATATTGCTTGAGTAAAGGAAGAGAAAACAACAGTTCTGTCAAGTCTGTGAGTTGTCTAGATACAAGGTTGCCAGAGCTGCTAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR TCA 90 bp | GGAGGAACAGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGCAGCTCTGGCTGTGTaGGAAGTGCTGTGCTCGCCC | + |
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Preference number: 2 (lower is better) Translates to: GGTGRSLHWLPSGQTLCRAALAV*EVLCSP Trigger: GGGCGAGCACAGCACTTCTCACACAGCCAGAGCTGC...TCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCTGCAACAGGAATGGGAAGGCAAGTGAGGTGTTCGTTGTCGGGAGGGGGGCTGAGACAGAAGTTTaGGGCCAGCCTGGGCTACAC | + |
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Preference number: 2 (lower is better) Translates to: PGCNRNGKASEVFVVGRGAETEV*GQPGLH Trigger: GTGTAGCCCAGGCTGGCCTCAAACTTCTGTCTCAGC...CCCCCTCCCGACAACGAACACCTCACTTGCCTTCCCATTCCTGTTGCAGCCAGG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR CCA 90 bp | GGAGGAACAGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGGCCCTGTGCTTCTGTaGCTGGTGAGAGACACCCTC | + |
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Preference number: 2 (lower is better) Translates to: GGTGRSLHWLPSGQTLCRGPVLL*LVRDTL Trigger: GAGGGTGTCTCTCACCAGCCACAGAAGCACAGGGCC...TCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCTGCAACAGGAATGGGAAGGCAAGTGAGGTGTTCGTTGTCGGGAGGGGGCAGCACTTGGGAGGCTaGGACAGAAGTTTGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PGCNRNGKASEVFVVGRGQHLGG*DRSLRP Trigger: TGGCCTCAAACTTCTGTCTCAGCCTCCCAAGTGCTG...CCCCCTCCCGACAACGAACACCTCACTTGCCTTCCCATTCCTGTTGCAGCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR CCA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAGGCCCTGTGCTTCTGTaGCTGGTGAGAGACACCCTC | + |
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Preference number: 2 (lower is better) Translates to: RPEPALASFWSDLMQRSPGPVLL*LVRDTL Trigger: GAGGGTGTCTCTCACCAGCCACAGAAGCACAGGGCC...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCTGCAACAGGAATGGGAAGGCAAGTGAGGTGTTCGTTGTCGGGAGGGGGAAAAAGGACCTAGGATaGCAAGTGCCAAATGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: PGCNRNGKASEVFVVGRGKKDLG*QVPNGG Trigger: CCCTCCATTTGGCACTTGTCATCCTAGGTCCTTTTT...CCCCCTCCCGACAACGAACACCTCACTTGCCTTCCCATTCCTGTTGCAGCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCTGCAACAGGAATGGGAAGGCAAGTGAGGTGTTCGTTGTCGGGAGGGGGACTTTGAAATCAGGATaGGAGCATGAAGGCTCATGC | + |
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Preference number: 2 (lower is better) Translates to: PGCNRNGKASEVFVVGRGTLKSG*EHEGSC Trigger: GCATGAGCCTTCATGCTCTCATCCTGATTTCAAAGT...CCCCCTCCCGACAACGAACACCTCACTTGCCTTCCCATTCCTGTTGCAGCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR GCA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTAAGCGCTGCCTGCCCTaGCCAGATCCCAGAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSKRCLP*PDPRAA Trigger: AGCTGCTCTGGGATCTGGGCAGGGCAGGCAGCGCTT...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR GCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCAAGCGCTGCCTGCCCTaGCCAGATCCCAGAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSKRCLP*PDPRAA Trigger: AGCTGCTCTGGGATCTGGGCAGGGCAGGCAGCGCTT...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR CCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCGGCCGGAGCCTGCACTaGCTTCCTTCTGGTCAGACC | + |
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Preference number: 2 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSGRSLH*LPSGQT Trigger: GGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCC...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR GCA 90 bp | TATCAAGGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACTGGAAGCGGGCCTTTaGTGGAAGGGCTGGTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: YQGLRRWGRSGKESLFHRLEAGL*WKGWCV Trigger: GACACACCAGCCCTTCCAGCAAAGGCCCGCTTCCAG...TCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR GCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCGAACAGGCCGGAGCCTaGACTGGCTTCCTTCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSEQAGA*TGFLLV Trigger: GACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTC...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR CCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCGAAGCGGGCCTTTGCTaGAAGGGCTGGTGTGTCCGA | + |
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Preference number: 2 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSEAGLC*KGWCVR Trigger: TCGGACACACCAGCCCTTCCAGCAAAGGCCCGCTTC...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR TCA 90 bp | GGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAGAAACAGCACTTGGGAGGCTaGGACAGAAGTTTGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: GLRRWGRSGKESLFHRQKQHLGG*DRSLRP Trigger: TGGCCTCAAACTTCTGTCTCAGCCTCCCAAGTGCTG...TTTCTGTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCTGCAACAGGAATGGGAAGGCAAGTGAGGTGTTCGTTGTCGGGAGGGGGTCCCACAGGCCAAAGTaGTTTATAGTATCATTTGGT | + |
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Preference number: 2 (lower is better) Translates to: PGCNRNGKASEVFVVGRGSHRPK*FIVSFG Trigger: ACCAAATGATACTATAAATCACTTTGGCCTGTGGGA...CCCCCTCCCGACAACGAACACCTCACTTGCCTTCCCATTCCTGTTGCAGCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR CCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCAAGGTGAGTAGAAGCTaGGTGTGGCCGTTGCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSKVSRS*VWPLPS Trigger: CGAGGGCAACGGCCACACCCAGCTTCTACTCACCTT...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR GCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCTCAGTAGAGGGGCTGTaGAGTAAGGAGGGCCAACAG | + |
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Preference number: 2 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSSVEGL*SKEGQQ Trigger: CTGTTGGCCCTCCTTACTGCACAGCCCCTCTACTGA...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR CCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCACAAGTGGGGAGGCCTaGCTGCAACAGGAATGGGAA | + |
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Preference number: 2 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSTSGEA*LQQEWE Trigger: TTCCCATTCCTGTTGCAGCCAGGCCTCCCCACTTGT...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR TCA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTTGCTTCTGTGGCTGGTaGGAGACACCCTCAAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSCFCGW*ETPSSL Trigger: TAGACTTGAGGGTGTCTCTCACCAGCCACAGAAGCA...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR TCA 90 bp | GGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAGAAAATAAAGTCTGCCCCGTaGGTCAGTTCTCTGCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: GLRRWGRSGKESLFHRQKIKSAP*VSSLPN Trigger: GTTTGGCAGAGAACTGACTCACGGGGCAGACTTTAT...TTTCTGTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR CCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCGTCCAAGCACTTTTCTaGAAGCGGGCCTTTGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSVQALF*KRAFAG Trigger: TCCAGCAAAGGCCCGCTTCCAGAAAAGTGCTTGGAC...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCTGCAACAGGAATGGGAAGGCAAGTGAGGTGTTCGTTGTCGGGAGGGGGGTAAGGCCTTTTTCTTaGTTTGTACATAGAAAATGC | + |
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Preference number: 2 (lower is better) Translates to: PGCNRNGKASEVFVVGRGVRPFS*FVHRKC Trigger: GCATTTTCTATGTACAAACCAAGAAAAAGGCCTTAC...CCCCCTCCCGACAACGAACACCTCACTTGCCTTCCCATTCCTGTTGCAGCCAGG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR TCA 90 bp | TATCAAGGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGAAAAAAGGACCTAGGATaGCAAGTGCCAAATGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: YQGLRRWGRSGKESLFHRKKDLG*QVPNGG Trigger: CCCTCCATTTGGCACTTGTCATCCTAGGTCCTTTTT...TCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR GCA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTGAAGCAGACCAGCCATaGTTTTCCTTTTCCTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSEADQP*FSFSCG Trigger: ACCACAGGAAAAGGAAAAGCATGGCTGGTCTGCTTC...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR GCA 90 bp | AAGTCAAAGGCTAGCCTGGGCTACATACTGAGGTATAGACTAAAACAAAAAGAAGAACAGGCCGGAGCCTaGACTGGCTTCCTTCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: KSKASLGYILRYRLKQKEEQAGA*TGFLLV Trigger: GACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTC...TTCTTTTTGTTTTAGTCTATACCTCAGTATGTAGCCCAGGCTAGCCTTTGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR TCA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACATGCTTCTGTGGCTGGTaGGAGACACCCTCAAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTCFCGW*ETPSSL Trigger: TAGACTTGAGGGTGTCTCTCACCAGCCACAGAAGCA...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR GCA 90 bp | TATCAAGGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGATCTGGTCAGACCTTATaGAGAGAAGTCCAAGCACTT | + |
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Preference number: 2 (lower is better) Translates to: YQGLRRWGRSGKESLFHRSGQTL*REVQAL Trigger: AAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGA...TCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACAATGACAAGTGCCAAATaGAGGGAGGAACAGGCCGGA | + |
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Preference number: 2 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTMTSAK*REEQAG Trigger: TCCGGCCTGTTCCTCCCTCCATTTGGCACTTGTCAT...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR-3UTR TCA 90 bp | GGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAGAAATCTTTAAGCTCACTTTaGAATCAGGATGAGAGCATG | + |
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Preference number: 2 (lower is better) Translates to: GLRRWGRSGKESLFHRQKSLSSL*NQDESM Trigger: CATGCTCTCATCCTGATTTCAAAGTGAGCTTAAAGA...TTTCTGTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| 3UTR CAA 90 bp | ACAGAACTGTTGTTTTCTCTTCCTTTACTCAAGCAATATCAAGGTTaGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGA | + |
|
Preference number: 2 (lower is better) Translates to: TELLFSLPLLKQYQG*RRWGRSGKESLFHR Trigger: TCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATATTGCTTGAGTAAAGGAAGAGAAAACAACAGTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR-3UTR GCA 90 bp | AAGTCAAAGGCTAGCCTGGGCTACATACTGAGGTATAGACTAAAACAAAAAGAAGAAGCAGACCAGCCATaGTTTTCCTTTTCCTGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: KSKASLGYILRYRLKQKEEADQP*FSFSCG Trigger: ACCACAGGAAAAGGAAAAGCATGGCTGGTCTGCTTC...TTCTTTTTGTTTTAGTCTATACCTCAGTATGTAGCCCAGGCTAGCCTTTGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR-3UTR GCA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACAAAACATAACCAAATCTaGACCCCAATACAAGTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTKHNQI*TPIQVG Trigger: CCCCACTTGTATTGGGGTGCAGATTTGGTTATGTTT...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR-3UTR CCA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACATATAATCTCAGCACTTaGGAGGCTGAGACAGAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTYNLST*EAETEV Trigger: AACTTCTGTCTCAGCCTCCCAAGTGCTGAGATTATA...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR-3UTR CCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCCATAGAAAATGCACGTaGCTTTCTCATTTGATCATT | + |
|
Preference number: 2 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSHRKCT*LSHLII Trigger: AATGATCAAATGAGAAAGCCACGTGCATTTTCTATG...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR-3UTR TCA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACATCTTTAAGCTCACTTTaGAATCAGGATGAGAGCATG | + |
|
Preference number: 2 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTSLSSL*NQDESM Trigger: CATGCTCTCATCCTGATTTCAAAGTGAGCTTAAAGA...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR-3UTR TCA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACATCCCACAGGCCAAAGTaGTTTATAGTATCATTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTSHRPK*FIVSFG Trigger: ACCAAATGATACTATAAATCACTTTGGCCTGTGGGA...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR CAA 90 bp | AAGGTTAGCAGCTCTGGCAACCTTGTATCTAGACAACTCACAGACTaGACAGAACTGTTGTTTTCTCTTCCTTTACTCAAGCAATATCAA | + |
|
Preference number: 2 (lower is better) Translates to: KVSSSGNLVSRQLTD*TELLFSLPLLKQYQ Trigger: TTGATATTGCTTGAGTAAAGGAAGAGAAAACAACAGTTCTGTCAAGTCTGTGAGTTGTCTAGATACAAGGTTGCCAGAGCTGCTAACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR-3UTR CCA 90 bp | AAGTCAAAGGCTAGCCTGGGCTACATACTGAGGTATAGACTAAAACAAAAAGAACATAGAAAATGCACGTaGCTTTCTCATTTGATCATT | + |
|
Preference number: 2 (lower is better) Translates to: KSKASLGYILRYRLKQKEHRKCT*LSHLII Trigger: AATGATCAAATGAGAAAGCCACGTGCATTTTCTATG...TTCTTTTTGTTTTAGTCTATACCTCAGTATGTAGCCCAGGCTAGCCTTTGACTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR TCA 72 bp | GCCGTTGCTGGCCGGCAGGTATGGTGGGTGCATCTGTaGGCCCTGTACTCGGGAGGTGGAGGCAGGGGATCC | + |
|
Preference number: 3 (lower is better) Translates to: AVAGRQVWWVHL*ALYSGGGGRGS Trigger: GGATCCCCTGCCTCCACCTCCCGAGTACAGGGCTCACAGATGCACCCACCATACCTGCCGGCCAGCAACGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR GCA 72 bp | TCTCTAAGGGGAGCACAAGGACACGCGTACAAGCGCTaGCTGCCCTGCCCAGATCCCAGAGCAGCTCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SLRGAQGHAYKR*LPCPDPRAALA Trigger: AGCCAGAGCTGCTCTGGGATCTGGGCAGGGCAGGCAGCGCTTGTACGCGTGTCCTTGTGCTCCCCTTAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR TCA 72 bp | GGCTGTGCAGTAAGGAGGGCCAACAGCACCAAGGAGTaGGCATGGGCACCTGTAGCGCACAGTGCTCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: GCAVRRANSTKE*AWAPVAHSAPT Trigger: TGTGGGAGCACTGTGCGCTACAGGTGCCCATGCTCACTCCTTGGTGCTGTTGGCCCTCCTTACTGCACAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR TCA 72 bp | AGGGGCGGAGCAGGGGCGGAGCACCGGCCTTGCTTGTaGGAACTGAGCCTTGGTCAGGATGTAATCGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RGGAGAEHRPCL*ELSLGQDVIAK Trigger: CTTTGCGATTACATCCTGACCAAGGCTCAGTTCTCACAAGCAAGGCCGGTGCTCCGCCCCTGCTCCGCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR TCA 72 bp | GCACACACAAGCAGACGGGAGCTCAGGATTGGCACGTaGGGGAGAACAGCTGAGAGAAGCCGTTGCTGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: AHTSRRELRIGT*GRTAERSRCWP Trigger: CGGCCAGCAACGGCTTCTCTCAGCTGTTCTCCCTCACGTGCCAATCCTGAGCTCCCGTCTGCTTGTGTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR TCA 72 bp | CTGGTAAGAGAACCTGAGGGTTGGAATGAGCCTCCCTaGGCGGCTCTCAGACAGGACAGACAGGTAAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LVREPEGWNEPP*AALRQDRQVRL Trigger: GAGCCTTACCTGTCTGTCCTGTCTGAGAGCCGCTCAGGGAGGCTCATTCCAACCCTCAGGTTCTCTTACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR GCA 72 bp | CGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATaGAGAGAAGTCCAAGCACTTTTCTGGAAGCGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RSLHWLPSGQTL*REVQALFWKRA Trigger: GGCCCGCTTCCAGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR CCA 72 bp | TGCCAAATGGAGGGAGGAACAGGCCGGAGCCTGCACTaGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: CQMEGGTGRSLH*LPSGQTLCREV Trigger: GACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTCCTCCCTCCATTTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR TCA 72 bp | TGGCCGTTGCCCTCGATGATCGCAGACTGGGAAGGCTaGGTAAGGAAGACTTCAAGTCAAAGGCTAGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WPLPSMIADWEG*VRKTSSQRLAW Trigger: CCAGGCTAGCCTTTGACTTGAAGTCTTCCTTACTCAGCCTTCCCAGTCTGCGATCATCGAGGGCAACGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR CCA 72 bp | GGGAGGAACAGGCCGGAGCCTGCACTGGCTTCCTTCTaGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GRNRPEPALASF*SDLMQRSPSTF Trigger: AAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR-3UTR CAA 90 bp | TATCAAGGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAAGTGAGGTGTTCGTaGTCGGGAGGGGGAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: YQGLRRWGRSGKESLFHRQVRCS*SGGGGA Trigger: AGCCCCTCCCCCTCCCGACAACGAACACCTCACTTG...TCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR GCA 72 bp | CAAATCTGCACCCCAATACAAGTGGGGAGGCCTGGCTaGAACAGGAATGGGAAGGCAAGTGAGGTGTTCGTT | + |
|
Preference number: 3 (lower is better) Translates to: QICTPIQVGRPG*NRNGKASEVFV Trigger: AACGAACACCTCACTTGCCTTCCCATTCCTGTTGCAGCCAGGCCTCCCCACTTGTATTGGGGTGCAGATTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR GCA 72 bp | CTGTGCTCGCCCTGGAGACAAGAAGCAGACCAGCCATaGTTTTCCTTTTCCTGTGGTCCTTTAGCTCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LCSPWRQEADQP*FSFSCGPLAPF Trigger: GAAAGGAGCTAAAGGACCACAGGAAAAGGAAAAGCATGGCTGGTCTGCTTCTTGTCTCCAGGGCGAGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR CCA 72 bp | AAAAACTCAAAACCTGTAAGAGGCCCTGTGCTTCTGTaGCTGGTGAGAGACACCCTCAAGTCTACTGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: KNSKPVRGPVLL*LVRDTLKSTAV Trigger: CACTGCAGTAGACTTGAGGGTGTCTCTCACCAGCCACAGAAGCACAGGGCCTCTTACAGGTTTTGAGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR TCA 72 bp | AGCCCTAACATATCCTGCTTCAGAAGACAGATGAGATaGACAGAGTCAGAGCCCTTGATGGCACACACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SPNISCFRRQMR*TESEPLMAHTS Trigger: GCTTGTGTGTGCCATCAAGGGCTCTGACTCTGTTCATCTCATCTGTCTTCTGAAGCAGGATATGTTAGGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR CCA 72 bp | TTGAAAAACATAACCAAATCTGCACCCCAATACAAGTaGGGAGGCCTGGCTGCAACAGGAATGGGAAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LKNITKSAPQYK*GGLAATGMGRQ Trigger: TTGCCTTCCCATTCCTGTTGCAGCCAGGCCTCCCCACTTGTATTGGGGTGCAGATTTGGTTATGTTTTTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR-3UTR CAA 90 bp | AAGTCAAAGGCTAGCCTGGGCTACATACTGAGGTATAGACTAAAACAAAAAGAATCTGGAAGCGGGCCTTaGCTGGAAGGGCTGGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KSKASLGYILRYRLKQKESGSGP*LEGLVC Trigger: ACACACCAGCCCTTCCAGCAAAGGCCCGCTTCCAGA...TTCTTTTTGTTTTAGTCTATACCTCAGTATGTAGCCCAGGCTAGCCTTTGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR TCA 72 bp | GATAAGATCTTGTCTCAAAACAAAAAGGACCTAGGATaGCAAGTGCCAAATGGAGGGAGGAACAGGCCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: DKILSQNKKDLG*QVPNGGRNRPE Trigger: CTCCGGCCTGTTCCTCCCTCCATTTGGCACTTGTCATCCTAGGTCCTTTTTGTTTTGAGACAAGATCTTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAGAAAAAGTCTACTGCAGTGTaGTTAAAAGGCTCAAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GLRRWGRSGKESLFHRQKKSTAV*LKGSKH Trigger: ATGCTTTGAGCCTTTTAACAACACTGCAGTAGACTT...TTTCTGTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR-3UTR CAA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCAGTGGGAAGGAGTCTTaGTTCCATAGACAGAAACTA | + |
|
Preference number: 3 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSSGKES*FHRQKL Trigger: TAGTTTCTGTCTATGGAACAAAGACTCCTTCCCACT...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR-3UTR CAA 90 bp | TATCAAGGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGAGGCCTTTTTCTTGGTTaGTACATAGAAAATGCACGT | + |
|
Preference number: 3 (lower is better) Translates to: YQGLRRWGRSGKESLFHRGLFLG*YIENAR Trigger: ACGTGCATTTTCTATGTACAAACCAAGAAAAAGGCC...TCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR TCA 72 bp | TGTTTTCTCTTCCTTTACTCAAGCAATATCAAGGTTTaGGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: CFLFLYSSNIKV*GDGDGVGRSLC Trigger: ACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATATTGCTTGAGTAAAGGAAGAGAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR TCA 72 bp | GCTCTGGCAACCTTGTATCTAGACAACTCACAGACTTaGCAGAACTGTTGTTTTCTCTTCCTTTACTCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: ALATLYLDNSQT*QNCCFLFLYSS Trigger: GCTTGAGTAAAGGAAGAGAAAACAACAGTTCTGTCAAGTCTGTGAGTTGTCTAGATACAAGGTTGCCAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR CCA 72 bp | TCTGCCAAACCGGCATTAACAGTAAGGCCTTTTTCTTaGTTTGTACATAGAAAATGCACGTGGCTTTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SAKPALTVRPFS*FVHRKCTWLSH Trigger: ATGAGAAAGCCACGTGCATTTTCTATGTACAAACCAAGAAAAAGGCCTTACTGTTAATGCCGGTTTGGCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR CAA 72 bp | GCGGAGCAGGGGCGGAGCAGGGGCGGAGCACCGGCCTaGCTTGTGAGAACTGAGCCTTGGTCAGGATGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: AEQGRSRGGAPA*LVRTEPWSGCN Trigger: ATTACATCCTGACCAAGGCTCAGTTCTCACAAGCAAGGCCGGTGCTCCGCCCCTGCTCCGCCCCTGCTCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | GGAGGAACAGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAAGGACAAGGGTCTCTTaGGGGGCAGCAGAGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGTGRSLHWLPSGQTLCRRTRVS*GAAEAA Trigger: AGCAGCCTCTGCTGCCCCCCAAGAGACCCTTGTCCT...TCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | GGAGGAACAGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGGGTTGCTGTTTCTCTaGGCTGGTTTAGGGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGTGRSLHWLPSGQTLCRGLLFL*AGLGGG Trigger: CCCACCCCCTAAACCAGCTCAGAGAAACAGCAACCC...TCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCACTGTGGCAGCAGTGGTaGCAGCAGATGTCACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPEPALASFWSDLMQRSPLWQQW*QQMSRW Trigger: CCACCGTGACATCTGCTGCCACCACTGCTGCCACAG...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAGGCTCGGGAGGTATGTaGGTAGGCAGTGGGGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RPEPALASFWSDLMQRSPGSGGM*VGSGGD Trigger: ATCACCCCCACTGCCTACCCACATACCTCCCGAGCC...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | GGAGGAACAGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAAATCGTGATGGGAAGTaGCCTGGTACGACCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGTGRSLHWLPSGQTLCRNRDGK*PGTTQG Trigger: ACCCTGGGTCGTACCAGGTCACTTCCCATCACGATT...TCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR GCA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCACTTCCACACTGTCCATaGCCATGCCTGGGTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPEPALASFWSDLMQRSPLPHCP*PCLGLQ Trigger: CTGGAGACCCAGGCATGGGCATGGACAGTGTGGAAG...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCATGTCTGTGGCAGCAGTaGTGGCAGCAGATGTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: RPEPALASFWSDLMQRSPCLWQQ*WQQMSR Trigger: CCGTGACATCTGCTGCCACCACTGCTGCCACAGACA...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | GGAGGAACAGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGCTGGGTATCGAAGTTaGTGGAATGCCTCTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGTGRSLHWLPSGQTLCRAGYRS*WNASLG Trigger: CCCAAGAGAGGCATTCCATCAACTTCGATACCCAGC...TCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR GCA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAATGGGCTCTGTGAGTaGCTTCCAAGGGAGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPEPALASFWSDLMQRSPNGLCE*LPREGS Trigger: TGACCCCTCCCTTGGAAGGCACTCACAGAGCCCATT...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCATCCTCTTCACTCTGTTaGCCAGGGCACTCTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPEPALASFWSDLMQRSPSSSLC*PGHSDG Trigger: GCCATCAGAGTGCCCTGGCCAACAGAGTGAAGAGGA...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | GGAGGAACAGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGACAATTCTTCTGCTGTTaGTCTCTGACTCAGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GGTGRSLHWLPSGQTLCRQFFCC*SLTQPP Trigger: CGGCGGCTGAGTCAGAGACCAACAGCAGAAGAATTG...TCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTCCTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | GGAGGAACAGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGGGACTTCTGTTTTCTaGTCCTCCTGCTGGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: GGTGRSLHWLPSGQTLCRGTSVF*SSCWEM Trigger: CATTTCCCAGCAGGAGGATCAGAAAACAGAAGTCCC...TCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAGACTCCCCAAAGCTCTaGTCCTGTATCTTCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPEPALASFWSDLMQRSPDSPKL*SCIFLG Trigger: CCCCAAGAAGATACAGGATCAGAGCTTTGGGGAGTC...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | GGAGGAACAGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGACCTGAGACTTCTCTCTaGCTCTTCTTCTACCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GGTGRSLHWLPSGQTLCRPETSL*LFFYQD Trigger: GTCCTGGTAGAAGAAGAGCCAGAGAGAAGTCTCAGG...TCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTCCTCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCATCTTTGTCATGTCTGTaGCAGCAGTGGTGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPEPALASFWSDLMQRSPSLSCL*QQWWQQ Trigger: CTGCTGCCACCACTGCTGCCACAGACATGACAAAGA...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAGCCAAGTCTCTTCTTTaGCTCCTCTTCTGGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPEPALASFWSDLMQRSPAKSLL*LLFWSE Trigger: CTCACTCCAGAAGAGGAGTCAAAGAAGAGACTTGGC...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCATTGGCCAGGGCACTCTaGTGGCTTTCATCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RPEPALASFWSDLMQRSPLARAL*WLSSSS Trigger: TGATGATGATGAAAGCCATCAGAGTGCCCTGGCCAA...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR GCA 90 bp | GGAGGAACAGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGACTGCTCCAATTCTTCTaGTGTTGGTCTCTGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGTGRSLHWLPSGQTLCRLLQFF*CWSLTQ Trigger: CTGAGTCAGAGACCAACAGCAGAAGAATTGGAGCAG...TCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTCCTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCACCTGAGACTTCTCTCTaGCTCTTCTTCTACCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RPEPALASFWSDLMQRSPPETSL*LFFYQD Trigger: GTCCTGGTAGAAGAAGAGCCAGAGAGAAGTCTCAGG...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | GGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAGAAAAGGACAAGGGTCTCTTaGGGGGCAGCAGAGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLRRWGRSGKESLFHRQKRTRVS*GAAEAA Trigger: AGCAGCCTCTGCTGCCCCCCAAGAGACCCTTGTCCT...TTTCTGTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | GGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAGAAAAGTGAATGGGCTCTGTaGGTGCCTTCCAAGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLRRWGRSGKESLFHRQKSEWAL*VPSKGG Trigger: CCCTCCCTTGGAAGGCACTCACAGAGCCCATTCACT...TTTCTGTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CCA 90 bp | GTGCTGTGCTCGCCCTGGAGACAAGAAGCAGACCAGCCATGCTTTTCCTTTTCCGCTTCAGAGTTAGGCTaGCTTCCAGTTGAGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLCSPWRQEADQPCFSFSASELG*LPVEPS Trigger: ACTTGGCTCAACTGGAAGCCAGCCTAACTCTGAAGC...GGAAAAGGAAAAGCATGGCTGGTCTGCTTCTTGTCTCCAGGGCGAGCACAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | TATCAAGGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACTGTGGCAGCAGTGGTaGCAGCAGATGTCACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YQGLRRWGRSGKESLFHRLWQQW*QQMSRW Trigger: CCACCGTGACATCTGCTGCCACCACTGCTGCCACAG...TCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTGGCTCGGGAGGTATGTaGGTAGGCAGTGGGGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSGSGGM*VGSGGD Trigger: ATCACCCCCACTGCCTACCCACATACCTCCCGAGCC...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCACAGTTCAGCCACAGTTaGCCTTTGACTGAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPEPALASFWSDLMQRSPQFSHS*PLTELS Trigger: AGAAAGCTCAGTCAAAGGCCAACTGTGGCTGAACTG...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR GCA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTCTTCCACACTGTCCATaGCCATGCCTGGGTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSLPHCP*PCLGLQ Trigger: CTGGAGACCCAGGCATGGGCATGGACAGTGTGGAAG...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR GCA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTCAGAGGCTGCTTAGGTaGATGCTCAGGACCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSQRLLR*MLRTRL Trigger: GAGCCTGGTCCTGAGCATGCACCTAAGCAGCCTCTG...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTTGTCTGTGGCAGCAGTaGTGGCAGCAGATGTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSCLWQQ*WQQMSR Trigger: CCGTGACATCTGCTGCCACCACTGCTGCCACAGACA...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CCA 90 bp | GGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAGAAAGCTGTTTCTCTGAGCTaGTTTAGGGGGTGGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLRRWGRSGKESLFHRQKAVSLS*FRGWDG Trigger: CCCATCCCACCCCCTAAACCAGCTCAGAGAAACAGC...TTTCTGTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CCA 90 bp | GGAGGAACAGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGATTAATTCTTTCCTTATaGCAGCCTTGTCAGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGTGRSLHWLPSGQTLCRLILSL*QPCQQE Trigger: CTCCTGCTGACAAGGCTGCCATAAGGAAAGAATTAA...TCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR TCA 90 bp | TATCAAGGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACTGGTAAGGGCCTGCTaGATTCGGATATGCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YQGLRRWGRSGKESLFHRLVRAC*IRICSG Trigger: CCCACTGCATATCCGAATTCAGCAGGCCCTTACCAG...TCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR GCA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTAGGTGTTGTGTCCCCTaGTTCCACACTGTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSRCCVP*FHTVHA Trigger: GGCATGGACAGTGTGGAAGCAGGGGACACAACACCT...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR GCA 90 bp | TATCAAGGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGAAATGGGCTCTGTGAGTaGCTTCCAAGGGAGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YQGLRRWGRSGKESLFHRNGLCE*LPREGS Trigger: TGACCCCTCCCTTGGAAGGCACTCACAGAGCCCATT...TCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR GCA 90 bp | GGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAGAAAGCTGCTCAGCTTCATTaGCAGCGTGTCCTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLRRWGRSGKESLFHRQKAAQLH*QRVLPL Trigger: AAGAGGAAGGACACGCTGGCAATGAAGCTGAGCAGC...TTTCTGTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR GCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCGTTCACTGGGTCTGCTaGTCAGCTTCATTGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSVHWVC*SASLPA Trigger: CGCTGGCAATGAAGCTGAGCAGCAGACCCAGTGAAC...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CCA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTATGGAATGCCTCTCTTaGGTGGCAAGGGTGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSMECLS*VARVGM Trigger: CATCCCCACCCTTGCCACCCAAGAGAGGCATTCCAT...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CCA 90 bp | TATCAAGGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGAATGGAATGCCTCTCTTaGGTGGCAAGGGTGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: YQGLRRWGRSGKESLFHRMECLS*VARVGM Trigger: CATCCCCACCCTTGCCACCCAAGAGAGGCATTCCAT...TCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR TCA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTGCTGGGTATCGAAGTTaGTGGAATGCCTCTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSAGYRS*WNASLG Trigger: CCCAAGAGAGGCATTCCATCAACTTCGATACCCAGC...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR TCA 90 bp | GGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAGAAATTGGCCAGGGCACTCTaGTGGCTTTCATCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GLRRWGRSGKESLFHRQKLARAL*WLSSSS Trigger: TGATGATGATGAAAGCCATCAGAGTGCCCTGGCCAA...TTTCTGTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR TCA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACATCTGCTGTTGGTCTCTaGCTCAGCCGCCGGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTSAVGL*LSRRIS Trigger: GCTGATCCGGCGGCTGAGTCAGAGACCAACAGCAGA...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR TCA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTGCCACAGTTGGCCTTTaGCTGAGCTTTCTAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSATVGL*LSFLVR Trigger: CCTCACTAGAAAGCTCAGTCAAAGGCCAACTGTGGC...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR TCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCATGGCTCAGCTTTCCTaGATCCTCACCATCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSMAQLS*ILTILL Trigger: GAGCAGGATGGTGAGGATTCAGGAAAGCTGAGCCAT...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102568.10 |
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| CDS-3UTR GCA 90 bp | GGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAGAAAGTTTCGACAGCACTGTaGCACTGTTCATTGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLRRWGRSGKESLFHRQKVSTAL*HCSLLG Trigger: CCCAAGCAATGAACAGTGGCACAGTGCTGTCGAAAC...TTTCTGTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCAATGCCTCTCTTGGGTaGCAAGGGTGGGGATGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSNASLG*QGWGWF Trigger: AAACCATCCCCACCCTTGCCACCCAAGAGAGGCATT...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CCA 90 bp | TATCAAGGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGAAATGCCTCTCTTGGGTaGCAAGGGTGGGGATGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YQGLRRWGRSGKESLFHRNASLG*QGWGWF Trigger: AAACCATCCCCACCCTTGCCACCCAAGAGAGGCATT...TCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | GGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAGAAAAGCGTGTTCCCGATCTaGTGCCGTATTTCATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLRRWGRSGKESLFHRQKSVFPI*CRISFH Trigger: GTGGAATGAAATACGGCACCAGATCGGGAACACGCT...TTTCTGTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCCAATTCTTCTGCTGTTaGTCTCTGACTCAGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSQFFCC*SLTQPP Trigger: CGGCGGCTGAGTCAGAGACCAACAGCAGAAGAATTG...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCACCGCAGAATCTTCCTaGCAAGCAGTTCAGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSTAESS*QAVQPQ Trigger: CTGTGGCTGAACTGCTTGCCAGGAAGATTCTGCGGT...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTACCGCAGAATCTTCCTaGCAAGCAGTTCAGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSTAESS*QAVQPQ Trigger: CTGTGGCTGAACTGCTTGCCAGGAAGATTCTGCGGT...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTAGTCAGTTTGGTCCATaGTTTGTCTGCTCGCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSSQFGP*FVCSPV Trigger: GACCGGCGAGCAGACAAACCATGGACCAAACTGACT...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCAGTCAGTTTGGTCCATaGTTTGTCTGCTCGCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSSQFGP*FVCSPV Trigger: GACCGGCGAGCAGACAAACCATGGACCAAACTGACT...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTGCCAAGTCTCTTCTTTaGCTCCTCTTCTGGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSAKSLL*LLFWSE Trigger: CTCACTCCAGAAGAGGAGTCAAAGAAGAGACTTGGC...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCGGGACTTCTGTTTTCTaGTCCTCCTGCTGGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSGTSVF*SSCWEM Trigger: CATTTCCCAGCAGGAGGATCAGAAAACAGAAGTCCC...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCTGTTTGCTGTCTACATaGACCTCCATCTCCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSCLLST*TSISEL Trigger: GAGCTCGGAGATGGAGGTTCATGTAGACAGCAAACA...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR GCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCGTTTCGACAGCACTGTaGCACTGTTCATTGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSVSTAL*HCSLLG Trigger: CCCAAGCAATGAACAGTGGCACAGTGCTGTCGAAAC...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR GCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCGTGTTCCCGATCTGGTaGCGTATTTCATTCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSVFPIW*RISFHS Trigger: GGAGTGGAATGAAATACGGCACCAGATCGGGAACAC...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | TATCAAGGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACACTGCCTATGGGGGTaGTGTGTCCGTTCTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: YQGLRRWGRSGKESLFHRHCLWG*CVRSLM Trigger: CATTAAAGAACGGACACACCACCCCCATAGGCAGTG...TCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | TATCAAGGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGAATTCAGGTTGGTCTCTaGTTCACTGGGTCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YQGLRRWGRSGKESLFHRIQVGL*FTGSAA Trigger: AGCAGCAGACCCAGTGAACCAGAGACCAACCTGAAT...TCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | GGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAGAAACAGTTCAGCCACAGTTaGCCTTTGACTGAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLRRWGRSGKESLFHRQKQFSHS*PLTELS Trigger: AGAAAGCTCAGTCAAAGGCCAACTGTGGCTGAACTG...TTTCTGTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | AAGTCAAAGGCTAGCCTGGGCTACATACTGAGGTATAGACTAAAACAAAAAGAATCTGCTGTTGGTCTCTaGCTCAGCCGCCGGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSKASLGYILRYRLKQKESAVGL*LSRRIS Trigger: GCTGATCCGGCGGCTGAGTCAGAGACCAACAGCAGA...TTCTTTTTGTTTTAGTCTATACCTCAGTATGTAGCCCAGGCTAGCCTTTGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR GCA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACAAGGTGTTGTGTCCCCTaGTTCCACACTGTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTRCCVP*FHTVHA Trigger: GGCATGGACAGTGTGGAAGCAGGGGACACAACACCT...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR GCA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCATTCTCTTTGATCATTTaGTGTCTTAGTTGTGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: RPEPALASFWSDLMQRSPFSLII*CLSCER Trigger: TCGTTCACAACTAAGACAGCAAATGATCAAAGAGAA...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR GCA 90 bp | GGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAGAAACATTCCACTCCTCCTTaGTTTTACGAGGCCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLRRWGRSGKESLFHRQKHSTPP*FYEAKN Trigger: ATTCTTGGCCTCGTAAAAGCAAGGAGGAGTGGAATG...TTTCTGTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR GCA 90 bp | GGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAGAAAGATTTCCCGTTTCTCTaGTTGCCGATCAGCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GLRRWGRSGKESLFHRQKDFPFL*LPISFI Trigger: AATGAAGCTGATCGGCAAGCAGAGAAACGGGAAATC...TTTCTGTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCATTCCTCTTCATCATCTaGAACTTTCAACATCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RPEPALASFWSDLMQRSPFLFII*NFQHLN Trigger: ATTGAGATGTTGAAAGTTCCAGATGATGAAGAGGAA...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACATCCTCTTCACTCTGTTaGCCAGGGCACTCTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTSSSLC*PGHSDG Trigger: GCCATCAGAGTGCCCTGGCCAACAGAGTGAAGAGGA...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTACCTCTGGCACAATTTaGAAAGTCTTAGCAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSTSGTI*KVLAGT Trigger: AGTGCCTGCTAAGACTTTTCAAATTGTGCCAGAGGT...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCACCTCTGGCACAATTTaGAAAGTCTTAGCAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSTSGTI*KVLAGT Trigger: AGTGCCTGCTAAGACTTTTCAAATTGTGCCAGAGGT...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | AAGTCAAAGGCTAGCCTGGGCTACATACTGAGGTATAGACTAAAACAAAAAGAAAGTGAATGGGCTCTGTaGGTGCCTTCCAAGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSKASLGYILRYRLKQKESEWAL*VPSKGG Trigger: CCCTCCCTTGGAAGGCACTCACAGAGCCCATTCACT...TTCTTTTTGTTTTAGTCTATACCTCAGTATGTAGCCCAGGCTAGCCTTTGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR GCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCCTAACGCTGAGAACTTaGTTTTCCTTTTGGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSLTLRT*FSFWWE Trigger: CTCCCACCAAAAGGAAAAGCAAGTTCTCAGCGTTAG...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR GCA 90 bp | AAGTCAAAGGCTAGCCTGGGCTACATACTGAGGTATAGACTAAAACAAAAAGAACAGAGGCTGCTTAGGTaGATGCTCAGGACCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSKASLGYILRYRLKQKEQRLLR*MLRTRL Trigger: GAGCCTGGTCCTGAGCATGCACCTAAGCAGCCTCTG...TTCTTTTTGTTTTAGTCTATACCTCAGTATGTAGCCCAGGCTAGCCTTTGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR GCA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACAGCTGCTCAGCTTCATTaGCAGCGTGTCCTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTAAQLH*QRVLPL Trigger: AAGAGGAAGGACACGCTGGCAATGAAGCTGAGCAGC...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR GCA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCGATTTCCCGTTTCTCTaGTTGCCGATCAGCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSDFPFL*LPISFI Trigger: AATGAAGCTGATCGGCAAGCAGAGAAACGGGAAATC...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | AAGTCAAAGGCTAGCCTGGGCTACATACTGAGGTATAGACTAAAACAAAAAGAACTGGTAAGGGCCTGCTaGATTCGGATATGCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSKASLGYILRYRLKQKELVRAC*IRICSG Trigger: CCCACTGCATATCCGAATTCAGCAGGCCCTTACCAG...TTCTTTTTGTTTTAGTCTATACCTCAGTATGTAGCCCAGGCTAGCCTTTGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | AAGTCAAAGGCTAGCCTGGGCTACATACTGAGGTATAGACTAAAACAAAAAGAAAATCGTGATGGGAAGTaGCCTGGTACGACCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSKASLGYILRYRLKQKENRDGK*PGTTQG Trigger: ACCCTGGGTCGTACCAGGTCACTTCCCATCACGATT...TTCTTTTTGTTTTAGTCTATACCTCAGTATGTAGCCCAGGCTAGCCTTTGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR TCA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACATGTTTGCTGTCTACATaGACCTCCATCTCCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTCLLST*TSISEL Trigger: GAGCTCGGAGATGGAGGTTCATGTAGACAGCAAACA...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACACACTGCCTATGGGGGTaGTGTGTCCGTTCTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTHCLWG*CVRSLM Trigger: CATTAAAGAACGGACACACCACCCCCATAGGCAGTG...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CCA 90 bp | AAGTCAAAGGCTAGCCTGGGCTACATACTGAGGTATAGACTAAAACAAAAAGAAGCTGTTTCTCTGAGCTaGTTTAGGGGGTGGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSKASLGYILRYRLKQKEAVSLS*FRGWDG Trigger: CCCATCCCACCCCCTAAACCAGCTCAGAGAAACAGC...TTCTTTTTGTTTTAGTCTATACCTCAGTATGTAGCCCAGGCTAGCCTTTGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CCA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACAGCCAAGAATTCAGGTTaGTCTCTGGTTCACTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTAKNSG*SLVHWV Trigger: GACCCAGTGAACCAGAGACCAACCTGAATTCTTGGC...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR GCA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACACTGCTCCAATTCTTCTaGTGTTGGTCTCTGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTLLQFF*CWSLTQ Trigger: CTGAGTCAGAGACCAACAGCAGAAGAATTGGAGCAG...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CCA 90 bp | GGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAGAAAGGAAAACTCAACCTCTaGCACAATTTGAAAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLRRWGRSGKESLFHRQKGKLNL*HNLKSL Trigger: AAGACTTTTCAAATTGTGCCAGAGGTTGAGTTTTCC...TTTCTGTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR GCA 90 bp | AAGTCAAAGGCTAGCCTGGGCTACATACTGAGGTATAGACTAAAACAAAAAGAAGTGTTCCCGATCTGGTaGCGTATTTCATTCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSKASLGYILRYRLKQKEVFPIW*RISFHS Trigger: GGAGTGGAATGAAATACGGCACCAGATCGGGAACAC...TTCTTTTTGTTTTAGTCTATACCTCAGTATGTAGCCCAGGCTAGCCTTTGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CCA 90 bp | AAGTCAAAGGCTAGCCTGGGCTACATACTGAGGTATAGACTAAAACAAAAAGAAGCCAAGAATTCAGGTTaGTCTCTGGTTCACTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSKASLGYILRYRLKQKEAKNSG*SLVHWV Trigger: GACCCAGTGAACCAGAGACCAACCTGAATTCTTGGC...TTCTTTTTGTTTTAGTCTATACCTCAGTATGTAGCCCAGGCTAGCCTTTGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CCA 90 bp | AAGTCAAAGGCTAGCCTGGGCTACATACTGAGGTATAGACTAAAACAAAAAGAAAGCGTGTTCCCGATCTaGTGCCGTATTTCATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSKASLGYILRYRLKQKESVFPI*CRISFH Trigger: GTGGAATGAAATACGGCACCAGATCGGGAACACGCT...TTCTTTTTGTTTTAGTCTATACCTCAGTATGTAGCCCAGGCTAGCCTTTGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTTTCCTCTTCATCATCTaGAACTTTCAACATCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSFLFII*NFQHLN Trigger: ATTGAGATGTTGAAAGTTCCAGATGATGAAGAGGAA...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACATTAATTCTTTCCTTATaGCAGCCTTGTCAGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTLILSL*QPCQQE Trigger: CTCCTGCTGACAAGGCTGCCATAAGGAAAGAATTAA...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CCA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACAGGAAAACTCAACCTCTaGCACAATTTGAAAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTGKLNL*HNLKSL Trigger: AAGACTTTTCAAATTGTGCCAGAGGTTGAGTTTTCC...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR GCA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACATTCTCTTTGATCATTTaGTGTCTTAGTTGTGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTFSLII*CLSCER Trigger: TCGTTCACAACTAAGACAGCAAATGATCAAAGAGAA...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| 3UTR CAA 72 bp | CTTGTATCTAGACAACTCACAGACTTGACAGAACTGTaGTTTTCTCTTCCTTTACTCAAGCAATATCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVSRQLTDLTEL*FSLPLLKQYQG Trigger: ACCTTGATATTGCTTGAGTAAAGGAAGAGAAAACAACAGTTCTGTCAAGTCTGTGAGTTGTCTAGATACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS GCA 90 bp | TGGTGGGAGGTGTTGTGTCCCCTGCTTCCACACTGTCCATGCCCATaGCTGGGTCTCCAGAGGGCTGCTCTGCTTCTTCCGATGGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WWEVLCPLLPHCPCP*LGLQRAALLLPMGL Trigger: AAGACCCATCGGAAGAAGCAGAGCAGCCCTCTGGAGACCCAGGCATGGGCATGGACAGTGTGGAAGCAGGGGACACAACACCTCCCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 ENSMUST00000152271.8 |
||
| CDS GCA 90 bp | TGGTGGGAGGTGTTGTGTCCCCTGCTTCCACACTGTCCATGCCCATaGCTGGGTCTCCAGAGGGCTGCTCTGCTTCTTCAACTGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: WWEVLCPLLPHCPCP*LGLQRAALLLQLHL Trigger: CAGATGCAGTTGAAGAAGCAGAGCAGCCCTCTGGAGACCCAGGCATGGGCATGGACAGTGTGGAAGCAGGGGACACAACACCTCCCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084249.11 ENSMUST00000136711.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGAACAGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGACCAATTCTTCTGCTGTaGGTCTCTGACTCAGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGTGRSLHWLPSGQTLCRPILLL*VSDSAA Trigger: GGCGGCTGAGTCAGAGACCAACAGCAGAAGAATTGG...TCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCTGTTCCTCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS CCA 90 bp | AGTGAGGTTCCTGAGACTTCTCTCTGGCTCTTCTTCTACCAGGACTaGGCTAGAGGACCTGGCACTGCCTATGGGGGTGGTGTGTCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: SEVPETSLWLFFYQD*ARGPGTAYGGGVSV Trigger: AACGGACACACCACCCCCATAGGCAGTGCCAGGTCCTCTAGCCCAGTCCTGGTAGAAGAAGAGCCAGAGAGAAGTCTCAGGAACCTCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 ENSMUST00000136711.2 ENSMUST00000152271.8 |
||
| CDS CCA 90 bp | CAGCAGGCTCCAAGCTGGGTATCGAAGTTGATGGAATGCCTCTCTTaGGTGGCAAGGGTGGGGATGGTTTCGACAGCACTGTGCCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: QQAPSWVSKLMECLS*VARVGMVSTALCHC Trigger: ACAGTGGCACAGTGCTGTCGAAACCATCCCCACCCTTGCCACCCAAGAGAGGCATTCCATCAACTTCGATACCCAGCTTGGAGCCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 ENSMUST00000152271.8 |
||
| CDS GCA 90 bp | ATTCAGGTTGGTCTCTGGTTCACTGGGTCTGCTGCTCAGCTTCATTaGCAGCGTGTCCTTCCTCTTCACTCTGTTGGCCAGGGCACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IQVGLWFTGSAAQLH*QRVLPLHSVGQGTL Trigger: CAGAGTGCCCTGGCCAACAGAGTGAAGAGGAAGGACACGCTGGCAATGAAGCTGAGCAGCAGACCCAGTGAACCAGAGACCAACCTGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
||
| CDS-3UTR CAA 90 bp | GTGCTGTGCTCGCCCTGGAGACAAGAAGCAGACCAGCCATGCTTTTCCTTTTCCTTTTGGTGGGAGGTGTaGTGTCCCCTGCTTCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: VLCSPWRQEADQPCFSFSFWWEV*CPLLPH Trigger: GTGTGGAAGCAGGGGACACAACACCTCCCACCAAAA...GGAAAAGGAAAAGCATGGCTGGTCTGCTTCTTGTCTCCAGGGCGAGCACAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CAA 90 bp | GTGCTGTGCTCGCCCTGGAGACAAGAAGCAGACCAGCCATGCTTTTCCTTTTCCTGCTGCTCAGCTTCATaGCCAGCGTGTCCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VLCSPWRQEADQPCFSFSCCSAS*PACPSS Trigger: AGAGGAAGGACACGCTGGCAATGAAGCTGAGCAGCA...GGAAAAGGAAAAGCATGGCTGGTCTGCTTCTTGTCTCCAGGGCGAGCACAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CAA 90 bp | GTGCTGTGCTCGCCCTGGAGACAAGAAGCAGACCAGCCATGCTTTTCCTTTTCCCCAATTCTTCTGCTGTaGGTCTCTGACTCAGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VLCSPWRQEADQPCFSFSPILLL*VSDSAA Trigger: GGCGGCTGAGTCAGAGACCAACAGCAGAAGAATTGG...GGAAAAGGAAAAGCATGGCTGGTCTGCTTCTTGTCTCCAGGGCGAGCACAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CAA 90 bp | CCTGGCTGCAACAGGAATGGGAAGGCAAGTGAGGTGTTCGTTGTCGGGAGGGGGAACCTCTGGCACAATTaGAAAAGTCTTAGCAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PGCNRNGKASEVFVVGRGNLWHN*KSLSRH Trigger: GTGCCTGCTAAGACTTTTCAAATTGTGCCAGAGGTT...CCCCCTCCCGACAACGAACACCTCACTTGCCTTCCCATTCCTGTTGCAGCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CAA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCCACAGTTGGCCTTaGACTGAGCTTTCTAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RPEPALASFWSDLMQRSPSHSWP*TELSSE Trigger: CTCACTAGAAAGCTCAGTCAAAGGCCAACTGTGGCT...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS TCA 90 bp | CTTAGTTGTGAACGAAGCAGCAGGCTCCAAGCTGGGTATCGAAGTTaGTGGAATGCCTCTCTTGGGTGGCAAGGGTGGGGATGGTTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LSCERSSRLQAGYRS*WNASLGWQGWGWFR Trigger: TCGAAACCATCCCCACCCTTGCCACCCAAGAGAGGCATTCCATCAACTTCGATACCCAGCTTGGAGCCTGCTGCTTCGTTCACAACTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 ENSMUST00000152271.8 |
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| CDS CCA 90 bp | TGCTTAGGTGCATGCTCAGGACCAGGCTCGGCTTCAGAGTTAGGCTaGCTTCCAGTTGAGCCAAGTCTCTTCTTTGACTCCTCTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CLGACSGPGSASELG*LPVEPSLFFDSSSG Trigger: TCCAGAAGAGGAGTCAAAGAAGAGACTTGGCTCAACTGGAAGCCAGCCTAACTCTGAAGCCGAGCCTGGTCCTGAGCATGCACCTAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 ENSMUST00000136711.2 ENSMUST00000152271.8 |
||
| CDS CCA 90 bp | CCACTCCTCCTTGCTTTTACGAGGCCAAGAATTCAGGTTGGTCTCTaGTTCACTGGGTCTGCTGCTCAGCTTCATTGCCAGCGTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLLLAFTRPRIQVGL*FTGSAAQLHCQRVL Trigger: AAGGACACGCTGGCAATGAAGCTGAGCAGCAGACCCAGTGAACCAGAGACCAACCTGAATTCTTGGCCTCGTAAAAGCAAGGAGGAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
||
| CDS-3UTR CAA 90 bp | GGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAGAAAGATGGAATGCCTCTCTaGGGTGGCAAGGGTGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLRRWGRSGKESLFHRQKDGMPL*GGKGGD Trigger: ATCCCCACCCTTGCCACCCAAGAGAGGCATTCCATC...TTTCTGTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CAA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCATCATTCCACTCCTCCTaGCTTTTACGAGGCCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RPEPALASFWSDLMQRSPSFHSS*LLRGQE Trigger: TTCTTGGCCTCGTAAAAGCAAGGAGGAGTGGAATGA...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CAA 90 bp | GTGCTGTGCTCGCCCTGGAGACAAGAAGCAGACCAGCCATGCTTTTCCTTTTCCAGCCACAGTTGGCCTTaGACTGAGCTTTCTAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLCSPWRQEADQPCFSFSSHSWP*TELSSE Trigger: CTCACTAGAAAGCTCAGTCAAAGGCCAACTGTGGCT...GGAAAAGGAAAAGCATGGCTGGTCTGCTTCTTGTCTCCAGGGCGAGCACAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CAA 90 bp | GTGCTGTGCTCGCCCTGGAGACAAGAAGCAGACCAGCCATGCTTTTCCTTTTCCTCAGCAGGAGTCAGTTaGGTCCATGGTTTGTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLCSPWRQEADQPCFSFSSAGVS*VHGLSA Trigger: AGCAGACAAACCATGGACCAAACTGACTCCTGCTGA...GGAAAAGGAAAAGCATGGCTGGTCTGCTTCTTGTCTCCAGGGCGAGCACAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CAA 90 bp | TATCAAGGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGAGATGGAATGCCTCTCTaGGGTGGCAAGGGTGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: YQGLRRWGRSGKESLFHRDGMPL*GGKGGD Trigger: ATCCCCACCCTTGCCACCCAAGAGAGGCATTCCATC...TCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CAA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAACCTCTGGCACAATTaGAAAAGTCTTAGCAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RPEPALASFWSDLMQRSPNLWHN*KSLSRH Trigger: GTGCCTGCTAAGACTTTTCAAATTGTGCCAGAGGTT...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CAA 90 bp | AGGCCGGAGCCTGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCATTCCCGTTTCTCTGCTaGCCGATCAGCTTCATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RPEPALASFWSDLMQRSPFPFLC*PISFIF Trigger: AAAAATGAAGCTGATCGGCAAGCAGAGAAACGGGAA...TGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCAGGCTCCGGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS GCA 90 bp | TCAGCGTGTTCCCGATCTGGTGCCGTATTTCATTCCACTCCTCCTTaGTTTTACGAGGCCAAGAATTCAGGTTGGTCTCTGGTTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: SACSRSGAVFHSTPP*FYEAKNSGWSLVHW Trigger: CCAGTGAACCAGAGACCAACCTGAATTCTTGGCCTCGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATCGGGAACACGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS CCA 90 bp | TTTCATTCCACTCCTCCTTGCTTTTACGAGGCCAAGAATTCAGGTTaGTCTCTGGTTCACTGGGTCTGCTGCTCAGCTTCATTGCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: FHSTPPCFYEAKNSG*SLVHWVCCSASLPA Trigger: CGCTGGCAATGAAGCTGAGCAGCAGACCCAGTGAACCAGAGACCAACCTGAATTCTTGGCCTCGTAAAAGCAAGGAGGAGTGGAATGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
||
| CDS CCA 90 bp | CTCATTAAACCGCAGAATCTTCCTGGCAAGCAGTTCAGCCACAGTTaGCCTTTGACTGAGCTTTCTAGTGAGGCGACGCTTGATTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LIKPQNLPGKQFSHS*PLTELSSEATLDFP Trigger: CGGGAAATCAAGCGTCGCCTCACTAGAAAGCTCAGTCAAAGGCCAACTGTGGCTGAACTGCTTGCCAGGAAGATTCTGCGGTTTAATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
||
| CDS-3UTR CAA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTTTTTGGTGGGAGGTGTaGTGTCCCCTGCTTCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSFWWEV*CPLLPH Trigger: GTGTGGAAGCAGGGGACACAACACCTCCCACCAAAA...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CAA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTTGCTGCTCAGCTTCATaGCCAGCGTGTCCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSCCSAS*PACPSS Trigger: AGAGGAAGGACACGCTGGCAATGAAGCTGAGCAGCA...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS GCA 90 bp | GGAGTGGCTGAGGTAGACGTCACGTCTTCAACAAACGGGCAGGTCTaGTCTTCCTCTTCATCATCTGGAACTTTCAACATCTCAATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GVAEVDVTSSTNGQV*SSSSSSGTFNISIV Trigger: CACGATTGAGATGTTGAAAGTTCCAGATGATGAAGAGGAAGAGCAGACCTGCCCGTTTGTTGAAGACGTGACGTCTACCTCAGCCACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS GCA 90 bp | CTGAGCTTTCTAGTGAGGCGACGCTTGATTTCCCGTTTCTCTGCTTaGCGATCAGCTTCATTTTTAGGCTGTAGTATGTTCCGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSFLVRRRLISRFSA*RSASFLGCSMFRCS Trigger: GGAGCAGCGGAACATACTACAGCCTAAAAATGAAGCTGATCGGCAAGCAGAGAAACGGGAAATCAAGCGTCGCCTCACTAGAAAGCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS CCA 90 bp | TGGAGGGTATATGGGACTCCCCAAAGCTCTGATCCTGTATCTTCTTaGGGACTTCTGTTTTCTGATCCTCCTGCTGGGAAATGTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WRVYGTPQSSDPVSS*GLLFSDPPAGKCPG Trigger: TCCAGGACATTTCCCAGCAGGAGGATCAGAAAACAGAAGTCCCCAAGAAGATACAGGATCAGAGCTTTGGGGAGTCCCATATACCCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS-3UTR CAA 90 bp | TATCAAGGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGAGGCCAAGAATTCAGGTaGGTCTCTGGTTCACTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: YQGLRRWGRSGKESLFHRGQEFR*VSGSLG Trigger: ACCCAGTGAACCAGAGACCAACCTGAATTCTTGGCC...TCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CAA 90 bp | GGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACAGAAATCAGCAGGAGTCAGTTaGGTCCATGGTTTGTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLRRWGRSGKESLFHRQKSAGVS*VHGLSA Trigger: AGCAGACAAACCATGGACCAAACTGACTCCTGCTGA...TTTCTGTCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS TCA 90 bp | TGGAATAGATCTGAAGAAGAGGAAAACTCAACCTCTGGCACAATTTaGAAAGTCTTAGCAGGCACTAGAGGGGACCGTGGAGGCTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: WNRSEEEENSTSGTI*KVLAGTRGDRGGSG Trigger: TCCCGAGCCTCCACGGTCCCCTCTAGTGCCTGCTAAGACTTTTCAAATTGTGCCAGAGGTTGAGTTTTCCTCTTCTTCAGATCTATTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS-3UTR CAA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCCACGGCTTGAAGATCTaGCCTAACGCTGAGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSHGLKI*PNAENL Trigger: CAAGTTCTCAGCGTTAGGCAAGATCTTCAAGCCGTG...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CAA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCAGCTGGGTATCGAAGTaGATGGAATGCCTCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSSWVSK*MECLSW Trigger: CCAAGAGAGGCATTCCATCAACTTCGATACCCAGCT...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CAA 90 bp | GGATTCTGTACAGTAGGGAAGCATCTTAACATGCGACAGCGAGGCTTTAAGTCCTTCCTTATGGCAGCCTaGTCAGCAGGAGTCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GFCTVGKHLNMRQRGFKSFLMAA*SAGVSL Trigger: CAAACTGACTCCTGCTGACAAGGCTGCCATAAGGAA...GGACTTAAAGCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CAA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTCCTAACGCTGAGAACTaGCTTTTCCTTTTGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSPNAEN*LFLLVG Trigger: TCCCACCAAAAGGAAAAGCAAGTTCTCAGCGTTAGG...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CAA 90 bp | TATCAAGGTTTGAGGAGATGGGGACGGAGTGGGAAGGAGTCTTTGTTCCATAGACCTAACGCTGAGAACTaGCTTTTCCTTTTGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: YQGLRRWGRSGKESLFHRPNAEN*LFLLVG Trigger: TCCCACCAAAAGGAAAAGCAAGTTCTCAGCGTTAGG...TCTATGGAACAAAGACTCCTTCCCACTCCGTCCCCATCTCCTCAAACCTTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CAA 90 bp | TGCACTGGCTTCCTTCTGGTCAGACCTTATGCAGAGAAGTCCAAGCACTTTTCTTCATTCCACTCCTCCTaGCTTTTACGAGGCCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CTGFLLVRPYAEKSKHFSSFHSS*LLRGQE Trigger: TTCTTGGCCTCGTAAAAGCAAGGAGGAGTGGAATGA...AGAAAAGTGCTTGGACTTCTCTGCATAAGGTCTGACCAGAAGGAAGCCAGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CAA 90 bp | ACCCAGTTACATTTCCCTTCCACTTACAATGTAAGTAGAATCCAGGCAGGAACAAGCTGGGTATCGAAGTaGATGGAATGCCTCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TQLHFPSTYNVSRIQAGTSWVSK*MECLSW Trigger: CCAAGAGAGGCATTCCATCAACTTCGATACCCAGCT...TGTTCCTGCCTGGATTCTACTTACATTGTAAGTGGAAGGGAAATGTAACTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
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| CDS-3UTR CAA 90 bp | AAGTCAAAGGCTAGCCTGGGCTACATACTGAGGTATAGACTAAAACAAAAAGAATTCCTTATGGCAGCCTaGTCAGCAGGAGTCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KSKASLGYILRYRLKQKEFLMAA*SAGVSL Trigger: CAAACTGACTCCTGCTGACAAGGCTGCCATAAGGAA...TTCTTTTTGTTTTAGTCTATACCTCAGTATGTAGCCCAGGCTAGCCTTTGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS-3UTR CAA 90 bp | AAGTCAAAGGCTAGCCTGGGCTACATACTGAGGTATAGACTAAAACAAAAAGAATTCCCGTTTCTCTGCTaGCCGATCAGCTTCATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: KSKASLGYILRYRLKQKEFPFLC*PISFIF Trigger: AAAAATGAAGCTGATCGGCAAGCAGAGAAACGGGAA...TTCTTTTTGTTTTAGTCTATACCTCAGTATGTAGCCCAGGCTAGCCTTTGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084170.12 ENSMUST00000102568.10 |
||
| CDS CCA 72 bp | GGGGCTGGTAAGGGCCTGCTGAATTCGGATATGCAGTaGGAGTGGGGGCAGCCTGGAGGGTATATGGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: GAGKGLLNSDMQ*EWGQPGGYMGL Trigger: GAGTCCCATATACCCTCCAGGCTGCCCCCACTCCCACTGCATATCCGAATTCAGCAGGCCCTTACCAGCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS CAA 90 bp | GCAGCAGGCTCCAAGCTGGGTATCGAAGTTGATGGAATGCCTCTCTaGGGTGGCAAGGGTGGGGATGGTTTCGACAGCACTGTGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: AAGSKLGIEVDGMPL*GGKGGDGFDSTVPL Trigger: CAGTGGCACAGTGCTGTCGAAACCATCCCCACCCTTGCCACCCAAGAGAGGCATTCCATCAACTTCGATACCCAGCTTGGAGCCTGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 ENSMUST00000152271.8 |
||
| CDS CCA 72 bp | CCTGAGACTTCTCTCTGGCTCTTCTTCTACCAGGACTaGGCTAGAGGACCTGGCACTGCCTATGGGGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PETSLWLFFYQD*ARGPGTAYGGG Trigger: ACCACCCCCATAGGCAGTGCCAGGTCCTCTAGCCCAGTCCTGGTAGAAGAAGAGCCAGAGAGAAGTCTCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 ENSMUST00000136711.2 ENSMUST00000152271.8 |
||
| CDS TCA 72 bp | GAACGAAGCAGCAGGCTCCAAGCTGGGTATCGAAGTTaGTGGAATGCCTCTCTTGGGTGGCAAGGGTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ERSSRLQAGYRS*WNASLGWQGWG Trigger: TCCCCACCCTTGCCACCCAAGAGAGGCATTCCATCAACTTCGATACCCAGCTTGGAGCCTGCTGCTTCGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 ENSMUST00000152271.8 |
||
| CDS CAA 72 bp | AGACGGACCTTGCTGTACTGCCAGCCGGAACCTCCTTaGCTTCACAAGAAGAGGACAAGGGTCTCTTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRTLLYCQPEPP*LHKKRTRVSWG Trigger: CCCCCAAGAGACCCTTGTCCTCTTCTTGTGAAGCAAAGGAGGTTCCGGCTGGCAGTACAGCAAGGTCCGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 ENSMUST00000152271.8 |
||
| CDS TCA 72 bp | CTGTCACTGTTCTCAAAAAGCAGTGAATGGGCTCTGTaGGTGCCTTCCAAGGGAGGGGTCACAGGAAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSLFSKSSEWAL*VPSKGGVTGRG Trigger: CCCCCTTCCTGTGACCCCTCCCTTGGAAGGCACTCACAGAGCCCATTCACTGCTTTTTGAGAACAGTGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
||
| CDS GCA 72 bp | GCCTGGGTCTCCAGAGGGCTGCTCTGCTTCTTCAACTaGATCTGGATTTACCGGTCTGGAGACATCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: AWVSRGLLCFFN*IWIYRSGDISL Trigger: CAAGCTGATGTCTCCAGACCGGTAAATCCAGATGCAGTTGAAGAAGCAGAGCAGCCCTCTGGAGACCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084249.11 ENSMUST00000136711.2 |
||
| CDS GCA 72 bp | ACACTGTCCATGCCCATGCCTGGGTCTCCAGAGGGCTaGTCTGCTTCTTCAACTGCATCTGGATTTACCGGT | + |
|
Preference number: 6 (lower is better) Translates to: TLSMPMPGSPEG*SASSTASGFTG Trigger: ACCGGTAAATCCAGATGCAGTTGAAGAAGCAGAGCAGCCCTCTGGAGACCCAGGCATGGGCATGGACAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084249.11 ENSMUST00000136711.2 |
||
| CDS CCA 72 bp | GCATGCTCAGGACCAGGCTCGGCTTCAGAGTTAGGCTaGCTTCCAGTTGAGCCAAGTCTCTTCTTTGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: ACSGPGSASELG*LPVEPSLFFDS Trigger: GGAGTCAAAGAAGAGACTTGGCTCAACTGGAAGCCAGCCTAACTCTGAAGCCGAGCCTGGTCCTGAGCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 ENSMUST00000136711.2 ENSMUST00000152271.8 |
||
| CDS CCA 72 bp | CCAAGCTGGGTATCGAAGTTGATGGAATGCCTCTCTTaGGTGGCAAGGGTGGGGATGGTTTCGACAGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: PSWVSKLMECLS*VARVGMVSTAL Trigger: CAGTGCTGTCGAAACCATCCCCACCCTTGCCACCCAAGAGAGGCATTCCATCAACTTCGATACCCAGCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 ENSMUST00000152271.8 |
||
| CDS CAA 72 bp | TGGTCTCTGGTTCACTGGGTCTGCTGCTCAGCTTCATaGCCAGCGTGTCCTTCCTCTTCACTCTGTTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: WSLVHWVCCSAS*PACPSSSLCWP Trigger: TGGCCAACAGAGTGAAGAGGAAGGACACGCTGGCAATGAAGCTGAGCAGCAGACCCAGTGAACCAGAGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS CAA 90 bp | AATTCAGGTTGGTCTCTGGTTCACTGGGTCTGCTGCTCAGCTTCATaGCCAGCGTGTCCTTCCTCTTCACTCTGTTGGCCAGGGCACTCT | + |
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Preference number: 6 (lower is better) Translates to: NSGWSLVHWVCCSAS*PACPSSSLCWPGHS Trigger: AGAGTGCCCTGGCCAACAGAGTGAAGAGGAAGGACACGCTGGCAATGAAGCTGAGCAGCAGACCCAGTGAACCAGAGACCAACCTGAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS CCA 72 bp | CTCCTCTTCTGGAGTGAGGTTCCTGAGACTTCTCTCTaGCTCTTCTTCTACCAGGACTGGGCTAGAGGACCT | + |
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Preference number: 6 (lower is better) Translates to: LLFWSEVPETSL*LFFYQDWARGP Trigger: AGGTCCTCTAGCCCAGTCCTGGTAGAAGAAGAGCCAGAGAGAAGTCTCAGGAACCTCACTCCAGAAGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 ENSMUST00000136711.2 ENSMUST00000152271.8 |
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| CDS CCA 72 bp | TACGAGGCCAAGAATTCAGGTTGGTCTCTGGTTCACTaGGTCTGCTGCTCAGCTTCATTGCCAGCGTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: YEAKNSGWSLVH*VCCSASLPACP Trigger: AGGACACGCTGGCAATGAAGCTGAGCAGCAGACCCAGTGAACCAGAGACCAACCTGAATTCTTGGCCTCGTA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS CCA 72 bp | CCGCAGAATCTTCCTGGCAAGCAGTTCAGCCACAGTTaGCCTTTGACTGAGCTTTCTAGTGAGGCGACGCTT | + |
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Preference number: 6 (lower is better) Translates to: PQNLPGKQFSHS*PLTELSSEATL Trigger: AAGCGTCGCCTCACTAGAAAGCTCAGTCAAAGGCCAACTGTGGCTGAACTGCTTGCCAGGAAGATTCTGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS CCA 72 bp | GTCTCCAGAGGGCTGCTCTGCTTCTTCAACTGCATCTaGATTTACCGGTCTGGAGACATCAGCTTGGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: VSRGLLCFFNCI*IYRSGDISLAH Trigger: ATGGGCCAAGCTGATGTCTCCAGACCGGTAAATCCAGATGCAGTTGAAGAAGCAGAGCAGCCCTCTGGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084249.11 ENSMUST00000136711.2 |
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| CDS CCA 72 bp | CCTATGGGGGTGGTGTGTCCGTTCTTTAATGCAGCATaGCTCAGCTTTCCTGAATCCTCACCATCCTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: PMGVVCPFFNAA*LSFPESSPSCS Trigger: CGAGCAGGATGGTGAGGATTCAGGAAAGCTGAGCCATGCTGCATTAAAGAACGGACACACCACCCCCATAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS CAA 72 bp | TCCAAGCTGGGTATCGAAGTTGATGGAATGCCTCTCTaGGGTGGCAAGGGTGGGGATGGTTTCGACAGCACT | + |
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Preference number: 6 (lower is better) Translates to: SKLGIEVDGMPL*GGKGGDGFDST Trigger: AGTGCTGTCGAAACCATCCCCACCCTTGCCACCCAAGAGAGGCATTCCATCAACTTCGATACCCAGCTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 ENSMUST00000152271.8 |
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| CDS CAA 72 bp | CACTCCTCCTTGCTTTTACGAGGCCAAGAATTCAGGTaGGTCTCTGGTTCACTGGGTCTGCTGCTCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: HSSLLLRGQEFR*VSGSLGLLLSF Trigger: GAAGCTGAGCAGCAGACCCAGTGAACCAGAGACCAACCTGAATTCTTGGCCTCGTAAAAGCAAGGAGGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS CCA 72 bp | CTTGCTTTTACGAGGCCAAGAATTCAGGTTGGTCTCTaGTTCACTGGGTCTGCTGCTCAGCTTCATTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LAFTRPRIQVGL*FTGSAAQLHCQ Trigger: CTGGCAATGAAGCTGAGCAGCAGACCCAGTGAACCAGAGACCAACCTGAATTCTTGGCCTCGTAAAAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS CCA 72 bp | ACTCCTCCTTGCTTTTACGAGGCCAAGAATTCAGGTTaGTCTCTGGTTCACTGGGTCTGCTGCTCAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: TPPCFYEAKNSG*SLVHWVCCSAS Trigger: TGAAGCTGAGCAGCAGACCCAGTGAACCAGAGACCAACCTGAATTCTTGGCCTCGTAAAAGCAAGGAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS CAA 90 bp | ATTTCATTCCACTCCTCCTTGCTTTTACGAGGCCAAGAATTCAGGTaGGTCTCTGGTTCACTGGGTCTGCTGCTCAGCTTCATTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ISFHSSLLLRGQEFR*VSGSLGLLLSFIAS Trigger: GCTGGCAATGAAGCTGAGCAGCAGACCCAGTGAACCAGAGACCAACCTGAATTCTTGGCCTCGTAAAAGCAAGGAGGAGTGGAATGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS CAA 90 bp | ATCAGCGTGTTCCCGATCTGGTGCCGTATTTCATTCCACTCCTCCTaGCTTTTACGAGGCCAAGAATTCAGGTTGGTCTCTGGTTCACTG | + |
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Preference number: 6 (lower is better) Translates to: ISVFPIWCRISFHSS*LLRGQEFRLVSGSL Trigger: CAGTGAACCAGAGACCAACCTGAATTCTTGGCCTCGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATCGGGAACACGCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS TCA 72 bp | CCTCTTCATCATCTGGAACTTTCAACATCTCAATCGTaGTGGGAAGTGACCTGGTACGACCCAGGGTACCAG | + |
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Preference number: 6 (lower is better) Translates to: PLHHLELSTSQS*WEVTWYDPGYQ Trigger: CTGGTACCCTGGGTCGTACCAGGTCACTTCCCATCACGATTGAGATGTTGAAAGTTCCAGATGATGAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS GCA 72 bp | TCCCGATCTGGTGCCGTATTTCATTCCACTCCTCCTTaGTTTTACGAGGCCAAGAATTCAGGTTGGTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SRSGAVFHSTPP*FYEAKNSGWSL Trigger: CAGAGACCAACCTGAATTCTTGGCCTCGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATCGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS CCA 72 bp | TATGGGACTCCCCAAAGCTCTGATCCTGTATCTTCTTaGGGACTTCTGTTTTCTGATCCTCCTGCTGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: YGTPQSSDPVSS*GLLFSDPPAGK Trigger: TTTCCCAGCAGGAGGATCAGAAAACAGAAGTCCCCAAGAAGATACAGGATCAGAGCTTTGGGGAGTCCCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS CAA 72 bp | TTCCCGATCTGGTGCCGTATTTCATTCCACTCCTCCTaGCTTTTACGAGGCCAAGAATTCAGGTTGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: FPIWCRISFHSS*LLRGQEFRLVS Trigger: AGAGACCAACCTGAATTCTTGGCCTCGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATCGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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| CDS TCA 72 bp | TCTGAAGAAGAGGAAAACTCAACCTCTGGCACAATTTaGAAAGTCTTAGCAGGCACTAGAGGGGACCGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SEEEENSTSGTI*KVLAGTRGDRG Trigger: TCCACGGTCCCCTCTAGTGCCTGCTAAGACTTTTCAAATTGTGCCAGAGGTTGAGTTTTCCTCTTCTTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084170.12 ENSMUST00000084249.11 ENSMUST00000102568.10 |
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