Pregenerated sensors for PGS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017715Ensembl transcript IDs: ENSMUST00000017859.10, ENSMUST00000100185.10, ENSMUST00000132676.8
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATCTTCACCCACAGCTTGACCTGCCGCCCTGGCTGCTCAAAGGTTaGGGAGGTCACCACACCAGACCGCAGGTAGAGCTGCTCTTGCTC | + |
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Preference number: 1 (lower is better) Translates to: HLHPQLDLPPWLLKG*GGHHTRPQVELLLL Trigger: GAGCAAGAGCAGCTCTACCTGCGGTCTGGTGTGGTGACCTCCGCAACCTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGGGTGAAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
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| 3UTR CCA 90 bp | TCAGACCCTGGCACCTGGCCTGAACGCTTCATGGCTCCCAGTCACTaGCCTGTCTCTGAAAAGAGTGGGGAGGTTGGAGGCCAGGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: SDPGTWPERFMAPSH*PVSEKSGEVGGQAS Trigger: AGAGGCCTGGCCTCCAACCTCCCCACTCTTTTCAGAGACAGGCCAGTGACTGGGAGCCATGAAGCGTTCAGGCCAGGTGCCAGGGTCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| 3UTR CCA 90 bp | CTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCATCCAAACAGTaGGTTCTGCCTCCCCTAGGGCACCCAGACCCTCAGCTCCATTGT | + |
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Preference number: 1 (lower is better) Translates to: LSLPCLPFSRSASKQ*VLPPLGHPDPQLHC Trigger: ACAATGGAGCTGAGGGTCTGGGTGCCCTAGGGGAGGCAGAACCCACTGTTTGGATGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| 3UTR GCA 90 bp | TACACAGAGAGTAGACATTACACAGGAGGGATCAGGAAGGAACATTaGTGGGATCTGAGCTGCGGTCAGTTTTCTCTGCCACTGACATTG | + |
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Preference number: 1 (lower is better) Translates to: YTESRHYTGGIRKEH*WDLSCGQFSLPLTL Trigger: CAATGTCAGTGGCAGAGAAAACTGACCGCAGCTCAGATCCCAGCAATGTTCCTTCCTGATCCCTCCTGTGTAATGTCTACTCTCTGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| 3UTR CCA 90 bp | ACAGAGAGTAGACATTACACAGGAGGGATCAGGAAGGAACATTGCTaGGATCTGAGCTGCGGTCAGTTTTCTCTGCCACTGACATTGAGA | + |
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Preference number: 1 (lower is better) Translates to: TESRHYTGGIRKEHC*DLSCGQFSLPLTLR Trigger: TCTCAATGTCAGTGGCAGAGAAAACTGACCGCAGCTCAGATCCCAGCAATGTTCCTTCCTGATCCCTCCTGTGTAATGTCTACTCTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| 3UTR CAA 90 bp | ACAGTGGGTTCTGCCTCCCCTAGGGCACCCAGACCCTCAGCTCCATaGTCCCCACAGGAGCTCGCTGGGACACCCAGACCGGAGTCATTG | + |
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Preference number: 2 (lower is better) Translates to: TVGSASPRAPRPSAP*SPQELAGTPRPESL Trigger: CAATGACTCCGGTCTGGGTGTCCCAGCGAGCTCCTGTGGGGACAATGGAGCTGAGGGTCTGGGTGCCCTAGGGGAGGCAGAACCCACTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| 3UTR-3UTR GCA 90 bp | CCATGTTTGGCACTCTCAGACCCTGGCACCTGGCCTGAACGCTTCATGGCTCCCACCCACAGCTTGACCTaGCGCCCTGGCTGCTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: PCLALSDPGTWPERFMAPTHSLT*RPGCSK Trigger: CTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGGGT...GGGAGCCATGAAGCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
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| 3UTR-3UTR GCA 90 bp | TTGGAGGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCATCCACCCACAGCTTGACCTaGCGCCCTGGCTGCTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LEARPLSLPCLPFSRSASTHSLT*RPGCSK Trigger: CTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGGGT...GGATGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCCTCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
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| 3UTR-3UTR CCA 90 bp | TACACAGGAGGGATCAGGAAGGAACATTGCTGGGATCTGAGCTGCGGTCAGTTTCCCACAGGAGCTCGCTaGGACACCCAGACCGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: YTGGIRKEHCWDLSCGQFPTGAR*DTQTGV Trigger: GACTCCGGTCTGGGTGTCCCAGCGAGCTCCTGTGGG...AAACTGACCGCAGCTCAGATCCCAGCAATGTTCCTTCCTGATCCCTCCTGTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| 3UTR CAA 90 bp | CAGAAGAAGTTCTTGATTAGCGGGGTCACCATCTTCACCCACAGCTaGACCTGCCGCCCTGGCTGCTCAAAGGTTGCGGAGGTCACCACA | + |
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Preference number: 2 (lower is better) Translates to: QKKFLISGVTIFTHS*TCRPGCSKVAEVTT Trigger: TGTGGTGACCTCCGCAACCTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGGGTGAAGATGGTGACCCCGCTAATCAAGAACTTCTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
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| 3UTR-3UTR CCA 90 bp | TATTCCCTATGTACACAGAGAGTAGACATTACACAGGAGGGATCAGGAAGGAACTCAGCATCCAAACAGTaGGTTCTGCCTCCCCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: YSLCTQRVDITQEGSGRNSASKQ*VLPPLG Trigger: CCCTAGGGGAGGCAGAACCCACTGTTTGGATGCTGA...GTTCCTTCCTGATCCCTCCTGTGTAATGTCTACTCTCTGTGTACATAGGGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| 3UTR GCA 72 bp | CCACAGCTTGACCTGCCGCCCTGGCTGCTCAAAGGTTaGGGAGGTCACCACACCAGACCGCAGGTAGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: PQLDLPPWLLKG*GGHHTRPQVEL Trigger: CAGCTCTACCTGCGGTCTGGTGTGGTGACCTCCGCAACCTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
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| 3UTR CCA 72 bp | CAGACCCTCAGCTCCATTGTCCCCACAGGAGCTCGCTaGGACACCCAGACCGGAGTCATTGCTGAAGCCCGG | + |
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Preference number: 3 (lower is better) Translates to: QTLSSIVPTGAR*DTQTGVIAEAR Trigger: CCGGGCTTCAGCAATGACTCCGGTCTGGGTGTCCCAGCGAGCTCCTGTGGGGACAATGGAGCTGAGGGTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| 3UTR-3UTR CAA 90 bp | TTGGAGGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCATCCATCTTCACCCACAGCTaGACCTGCCGCCCTGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: LEARPLSLPCLPFSRSASIFTHS*TCRPGC Trigger: GCAGCCAGGGCGGCAGGTCAAGCTGTGGGTGAAGAT...GGATGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCCTCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
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| 3UTR GCA 72 bp | ACCATCTTCACCCACAGCTTGACCTGCCGCCCTGGCTaGTCAAAGGTTGCGGAGGTCACCACACCAGACCGC | + |
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Preference number: 3 (lower is better) Translates to: TIFTHSLTCRPG*SKVAEVTTPDR Trigger: GCGGTCTGGTGTGGTGACCTCCGCAACCTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGGGTGAAGATGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
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| 3UTR GCA 72 bp | GTGGGGAGGTTGGAGGCCAGGCCTCTCTCCCTACCGTaGCTCCCTTTTTCACGGTCAGCATCCAAACAGTGG | + |
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Preference number: 3 (lower is better) Translates to: VGRLEARPLSLP*LPFSRSASKQW Trigger: CCACTGTTTGGATGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCCTCCAACCTCCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| 3UTR CCA 72 bp | GGTCACCATCTTCACCCACAGCTTGACCTGCCGCCCTaGCTGCTCAAAGGTTGCGGAGGTCACCACACCAGA | + |
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Preference number: 3 (lower is better) Translates to: GHHLHPQLDLPP*LLKGCGGHHTR Trigger: TCTGGTGTGGTGACCTCCGCAACCTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGGGTGAAGATGGTGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
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| 3UTR CCA 72 bp | CCGTGCCTCCCTTTTTCACGGTCAGCATCCAAACAGTaGGTTCTGCCTCCCCTAGGGCACCCAGACCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: PCLPFSRSASKQ*VLPPLGHPDPQ Trigger: CTGAGGGTCTGGGTGCCCTAGGGGAGGCAGAACCCACTGTTTGGATGCTGACCGTGAAAAAGGGAGGCACGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| 3UTR CCA 72 bp | GGCACCTGGCCTGAACGCTTCATGGCTCCCAGTCACTaGCCTGTCTCTGAAAAGAGTGGGGAGGTTGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: GTWPERFMAPSH*PVSEKSGEVGG Trigger: GCCTCCAACCTCCCCACTCTTTTCAGAGACAGGCCAGTGACTGGGAGCCATGAAGCGTTCAGGCCAGGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| 3UTR-3UTR CAA 90 bp | GGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCATCCAAACACTGGCTGCTCAAAGGTaGCGGAGGTCACCACACCAG | + |
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Preference number: 3 (lower is better) Translates to: GQASLPTVPPFFTVSIQTLAAQR*RRSPHQ Trigger: CTGGTGTGGTGACCTCCGCAACCTTTGAGCAGCCAG...TGTTTGGATGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
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| 3UTR TCA 72 bp | TCCATGTTTGGCACTCTCAGACCCTGGCACCTGGCCTaGACGCTTCATGGCTCCCAGTCACTGGCCTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: SMFGTLRPWHLA*TLHGSQSLACL Trigger: GAGACAGGCCAGTGACTGGGAGCCATGAAGCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| 3UTR CCA 72 bp | ACTCCTCCATGTTTGGCACTCTCAGACCCTGGCACCTaGCCTGAACGCTTCATGGCTCCCAGTCACTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: TPPCLALSDPGT*PERFMAPSHWP Trigger: AGGCCAGTGACTGGGAGCCATGAAGCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACATGGAGGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| 3UTR-3UTR CAA 90 bp | CCCCTAGGGCACCCAGACCCTCAGCTCCATTGTCCCCACAGGAGCTCGCTGGGATCTCAGAAGAAGTTCTaGATTAGCGGGGTCACCATC | + |
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Preference number: 3 (lower is better) Translates to: PLGHPDPQLHCPHRSSLGSQKKF*ISGVTI Trigger: GATGGTGACCCCGCTAATCAAGAACTTCTTCTGAGA...TCCCAGCGAGCTCCTGTGGGGACAATGGAGCTGAGGGTCTGGGTGCCCTAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
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| 3UTR-3UTR CAA 90 bp | AGCTCTGAGAAGATGCAGCCTCAGAGCCATTACGGCATGCAGAGTCACCTCGGAAGACCCTCAGCTCCATaGTCCCCACAGGAGCTCGCT | + |
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Preference number: 3 (lower is better) Translates to: SSEKMQPQSHYGMQSHLGRPSAP*SPQELA Trigger: AGCGAGCTCCTGTGGGGACAATGGAGCTGAGGGTCT...TCCGAGGTGACTCTGCATGCCGTAATGGCTCTGAGGCTGCATCTTCTCAGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| 3UTR CCA 72 bp | TCACCTCGGAGTCCTTGGTTCACACTCCTCCATGTTTaGCACTCTCAGACCCTGGCACCTGGCCTGAACGCT | + |
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Preference number: 3 (lower is better) Translates to: SPRSPWFTLLHV*HSQTLAPGLNA Trigger: AGCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACATGGAGGAGTGTGAACCAAGGACTCCGAGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| 3UTR-3UTR CAA 90 bp | TACACAGGAGGGATCAGGAAGGAACATTGCTGGGATCTGAGCTGCGGTCAGTTTTCTCAGAAGAAGTTCTaGATTAGCGGGGTCACCATC | + |
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Preference number: 3 (lower is better) Translates to: YTGGIRKEHCWDLSCGQFSQKKF*ISGVTI Trigger: GATGGTGACCCCGCTAATCAAGAACTTCTTCTGAGA...AAACTGACCGCAGCTCAGATCCCAGCAATGTTCCTTCCTGATCCCTCCTGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
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| CDS-3UTR GCA 90 bp | GGGCACCCAGACCCTCAGCTCCATTGTCCCCACAGGAGCTCGCTGGGACACCCACCGGTCCCCGGCAGCTaGAGCCTCTTCCTGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GHPDPQLHCPHRSSLGHPPVPGS*SLFLAQ Trigger: CTGAGCCAGGAAGAGGCTGCAGCTGCCGGGGACCGG...TGGGTGTCCCAGCGAGCTCCTGTGGGGACAATGGAGCTGAGGGTCTGGGTGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR CCA 90 bp | CCCCTAGGGCACCCAGACCCTCAGCTCCATTGTCCCCACAGGAGCTCGCTGGGACGGGCCCTGGCCGAGTaGATGACGTCCATGACCCGC | + |
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Preference number: 4 (lower is better) Translates to: PLGHPDPQLHCPHRSSLGRALAE*MTSMTR Trigger: GCGGGTCATGGACGTCATCCACTCGGCCAGGGCCCG...TCCCAGCGAGCTCCTGTGGGGACAATGGAGCTGAGGGTCTGGGTGCCCTAGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR CCA 90 bp | ACCCACAGCTTGACCTGCCGCCCTGGCTGCTCAAAGGTTGCGGAGGTCACCACAGTGCACATAGGCGGCTaGGATGGCGCCCGCCACGCC | + |
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Preference number: 4 (lower is better) Translates to: THSLTCRPGCSKVAEVTTVHIGG*DGARHA Trigger: GGCGTGGCGGGCGCCATCCCAGCCGCCTATGTGCAC...TGTGGTGACCTCCGCAACCTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
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| 3UTR CAA 72 bp | TCTGCCTCCCCTAGGGCACCCAGACCCTCAGCTCCATaGTCCCCACAGGAGCTCGCTGGGACACCCAGACCG | + |
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Preference number: 4 (lower is better) Translates to: SASPRAPRPSAP*SPQELAGTPRP Trigger: CGGTCTGGGTGTCCCAGCGAGCTCCTGTGGGGACAATGGAGCTGAGGGTCTGGGTGCCCTAGGGGAGGCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR TCA 90 bp | GACCCTCAGCTCCATTGTCCCCACAGGAGCTCGCTGGGACACCCAGACCGGAGTGGTGGGGAGGTGACCTaGGGAACGGTTGGGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: DPQLHCPHRSSLGHPDRSGGEVT*GTVGDS Trigger: GCTGTCCCCAACCGTTCCTCAGGTCACCTCCCCACC...ACTCCGGTCTGGGTGTCCCAGCGAGCTCCTGTGGGGACAATGGAGCTGAGGGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
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| CDS-3UTR GCA 90 bp | GGAGGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCATCCAAGCGTGCAGCATCTGCTaGCGGGCCCTGGCCGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: GGQASLPTVPPFFTVSIQACSIC*RALAEW Trigger: CCACTCGGCCAGGGCCCGGCAGCAGATGCTGCACGC...TTGGATGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR GCA 90 bp | GGGCACCCAGACCCTCAGCTCCATTGTCCCCACAGGAGCTCGCTGGGACACCCAAGCTGGACCCGATCCTaGTGCCCCAGGCTACACACC | + |
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Preference number: 4 (lower is better) Translates to: GHPDPQLHCPHRSSLGHPSWTRS*CPRLHT Trigger: GGTGTGTAGCCTGGGGCAGCAGGATCGGGTCCAGCT...TGGGTGTCCCAGCGAGCTCCTGTGGGGACAATGGAGCTGAGGGTCTGGGTGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR CCA 90 bp | ACCCACAGCTTGACCTGCCGCCCTGGCTGCTCAAAGGTTGCGGAGGTCACCACACGGGCCCTGGCCGAGTaGATGACGTCCATGACCCGC | + |
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Preference number: 4 (lower is better) Translates to: THSLTCRPGCSKVAEVTTRALAE*MTSMTR Trigger: GCGGGTCATGGACGTCATCCACTCGGCCAGGGCCCG...TGTGGTGACCTCCGCAACCTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
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| CDS-3UTR GCA 90 bp | GGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCATCCAAACAGCGTGCAGCATCTGCTaGCGGGCCCTGGCCGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: GQASLPTVPPFFTVSIQTACSIC*RALAEW Trigger: CCACTCGGCCAGGGCCCGGCAGCAGATGCTGCACGC...TGTTTGGATGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR GCA 90 bp | AGGTTGGAGGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCACCGGTCCCCGGCAGCTaGAGCCTCTTCCTGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: RLEARPLSLPCLPFSRSAPVPGS*SLFLAQ Trigger: CTGAGCCAGGAAGAGGCTGCAGCTGCCGGGGACCGG...TGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCCTCCAACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR CCA 90 bp | ATGGCTCCCAGTCACTGGCCTGTCTCTGAAAAGAGTGGGGAGGTTGGAGGCCAGGTGCACATAGGCGGCTaGGATGGCGCCCGCCACGCC | + |
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Preference number: 4 (lower is better) Translates to: MAPSHWPVSEKSGEVGGQVHIGG*DGARHA Trigger: GGCGTGGCGGGCGCCATCCCAGCCGCCTATGTGCAC...CTGGCCTCCAACCTCCCCACTCTTTTCAGAGACAGGCCAGTGACTGGGAGCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR TCA 90 bp | AGGTTGGAGGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCAGGTGGGGAGGTGACCTaGGGAACGGTTGGGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: RLEARPLSLPCLPFSRSAGGEVT*GTVGDS Trigger: GCTGTCCCCAACCGTTCCTCAGGTCACCTCCCCACC...TGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCCTCCAACCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
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| CDS-3UTR GCA 90 bp | GGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCATCCAAACACCGGTCCCCGGCAGCTaGAGCCTCTTCCTGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GQASLPTVPPFFTVSIQTPVPGS*SLFLAQ Trigger: CTGAGCCAGGAAGAGGCTGCAGCTGCCGGGGACCGG...TGTTTGGATGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR GCA 90 bp | AGCTCTGAGAAGATGCAGCCTCAGAGCCATTACGGCATGCAGAGTCACCTCGGAGCGTGCAGCATCTGCTaGCGGGCCCTGGCCGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SSEKMQPQSHYGMQSHLGACSIC*RALAEW Trigger: CCACTCGGCCAGGGCCCGGCAGCAGATGCTGCACGC...TCCGAGGTGACTCTGCATGCCGTAATGGCTCTGAGGCTGCATCTTCTCAGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR GCA 90 bp | CCATGTTTGGCACTCTCAGACCCTGGCACCTGGCCTGAACGCTTCATGGCTCCCAGCTGGACCCGATCCTaGTGCCCCAGGCTACACACC | + |
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Preference number: 4 (lower is better) Translates to: PCLALSDPGTWPERFMAPSWTRS*CPRLHT Trigger: GGTGTGTAGCCTGGGGCAGCAGGATCGGGTCCAGCT...GGGAGCCATGAAGCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR CCA 90 bp | AGCTCCATTGTCCCCACAGGAGCTCGCTGGGACACCCAGACCGGAGTCATTGCTGACGCGCACGCGCTCTaGAAACCTCTGCAGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SSIVPTGARWDTQTGVIADAHAL*KPLQEW Trigger: CCACTCCTGCAGAGGTTTCCAGAGCGCGTGCGCGTC...AGCAATGACTCCGGTCTGGGTGTCCCAGCGAGCTCCTGTGGGGACAATGGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR CCA 90 bp | GACCCTCAGCTCCATTGTCCCCACAGGAGCTCGCTGGGACACCCAGACCGGAGTGGCTCTCCGTCACGATaGCAATCTGGGCTTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: DPQLHCPHRSSLGHPDRSGSPSR*QSGLPG Trigger: ACCTGGAAGCCCAGATTGCCATCGTGACGGAGAGCC...ACTCCGGTCTGGGTGTCCCAGCGAGCTCCTGTGGGGACAATGGAGCTGAGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132676.8 |
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| CDS-3UTR TCA 90 bp | GGTTCTGCCTCCCCTAGGGCACCCAGACCCTCAGCTCCATTGTCCCCACAGGAGGGTCCTGGCGGTTGGTaGAGTATGAGTCACTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSASPRAPRPSAPLSPQEGPGGW*SMSHSG Trigger: ACCTGAGTGACTCATACTTCACCAACCGCCAGGACC...CTCCTGTGGGGACAATGGAGCTGAGGGTCTGGGTGCCCTAGGGGAGGCAGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR TCA 90 bp | GGTTCTGCCTCCCCTAGGGCACCCAGACCCTCAGCTCCATTGTCCCCACAGGAGCGTCCACCAGCTCTGTaGAGAAGTCGGCAATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSASPRAPRPSAPLSPQERPPAL*RSRQSQ Trigger: CTGAGATTGCCGACTTCTTCACAGAGCTGGTGGACG...CTCCTGTGGGGACAATGGAGCTGAGGGTCTGGGTGCCCTAGGGGAGGCAGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR TCA 90 bp | GACCCTCAGCTCCATTGTCCCCACAGGAGCTCGCTGGGACACCCAGACCGGAGTCGTCCACCAGCTCTGTaGAGAAGTCGGCAATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DPQLHCPHRSSLGHPDRSRPPAL*RSRQSQ Trigger: CTGAGATTGCCGACTTCTTCACAGAGCTGGTGGACG...ACTCCGGTCTGGGTGTCCCAGCGAGCTCCTGTGGGGACAATGGAGCTGAGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTAGGGCACCCAGACCCTCAGCTCCATTGTCCCCACAGGAGCTCGCTGGGAGATACTCAGCTCGAGTaGCTAGCACCAGGTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PLGHPDPQLHCPHRSSLGDTQLE*LAPGPC Trigger: ACATGGACCTGGTGCTAGGCACTCGAGCTGAGTATC...TCCCAGCGAGCTCCTGTGGGGACAATGGAGCTGAGGGTCTGGGTGCCCTAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR CCA 90 bp | ACCCACAGCTTGACCTGCCGCCCTGGCTGCTCAAAGGTTGCGGAGGTCACCACAGACCTGAGGAACGGTTaGGGACAGCAAGGGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: THSLTCRPGCSKVAEVTTDLRNG*GQQGSQ Trigger: TTGGCTCCCTTGCTGTCCCCAACCGTTCCTCAGGTC...TGTGGTGACCTCCGCAACCTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017859.10 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTGGGTTCTGCCTCCCCTAGGGCACCCAGACCCTCAGCTCCATTGTCCCTGCGCCAGTATTCCTaGAGCTGGACCCGATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTVGSASPRAPRPSAPLSLRQYS*SWTRSC Trigger: GCAGGATCGGGTCCAGCTCCAGGAATACTGGCGCAG...GGACAATGGAGCTGAGGGTCTGGGTGCCCTAGGGGAGGCAGAACCCACTGTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR TCA 90 bp | ACCCACAGCTTGACCTGCCGCCCTGGCTGCTCAAAGGTTGCGGAGGTCACCACAGGGAAGACAGTACCCTaGCATGAGAGCTGGAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: THSLTCRPGCSKVAEVTTGKTVP*HESWRL Trigger: GAGTCTCCAGCTCTCATGTCAGGGTACTGTCTTCCC...TGTGGTGACCTCCGCAACCTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017859.10 |
||
| CDS-3UTR TCA 90 bp | ACCCACAGCTTGACCTGCCGCCCTGGCTGCTCAAAGGTTGCGGAGGTCACCACACAAAGAGGTACACCTTaGTGTGCTGGAGGCCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: THSLTCRPGCSKVAEVTTQRGTP*CAGGRW Trigger: CCATCGGCCTCCAGCACATCAAGGTGTACCTCTTTG...TGTGGTGACCTCCGCAACCTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
||
| CDS-3UTR TCA 90 bp | GGTTCTGCCTCCCCTAGGGCACCCAGACCCTCAGCTCCATTGTCCCCACAGGAGGCGGTTGGTGAAGTATaGGTCACTCAGGTTTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GSASPRAPRPSAPLSPQEAVGEV*VTQVCT Trigger: GGTGCAAACCTGAGTGACTCATACTTCACCAACCGC...CTCCTGTGGGGACAATGGAGCTGAGGGTCTGGGTGCCCTAGGGGAGGCAGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCTGAGAAGATGCAGCCTCAGAGCCATTACGGCATGCAGAGTCACCTCGGAGAGAGCCAATCAGCGTaGGGCAGGGCAGGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSEKMQPQSHYGMQSHLGESQSA*GRAGCS Trigger: GGAGCAGCCTGCCCTGCCTCACGCTGATTGGCTCTC...TCCGAGGTGACTCTGCATGCCGTAATGGCTCTGAGGCTGCATCTTCTCAGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132676.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCTGCCTCCCCTAGGGCACCCAGACCCTCAGCTCCATTGTCCCCACAGGAGGAGCTCGAAGAACTCTaGAGGGGAAGACAGTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSASPRAPRPSAPLSPQEELEEL*RGRQYP Trigger: AGGGTACTGTCTTCCCCTGCAGAGTTCTTCGAGCTC...CTCCTGTGGGGACAATGGAGCTGAGGGTCTGGGTGCCCTAGGGGAGGCAGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTGGAGGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCATCGTCGCCCTGCAACTaGAAGGATACATCCCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: RLEARPLSLPCLPFSRSASSPCN*KDTSPT Trigger: CGTGGGGGATGTATCCTTGCAGTTGCAGGGCGACGA...TGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCCTCCAACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTGATTAGCGGGGTCACCATCTTCACCCACAGCTTGACCTGCCGCCCTGGCCTGCGCCAGTATTCCTaGAGCTGGACCCGATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLISGVTIFTHSLTCRPGLRQYS*SWTRSC Trigger: GCAGGATCGGGTCCAGCTCCAGGAATACTGGCGCAG...GCCAGGGCGGCAGGTCAAGCTGTGGGTGAAGATGGTGACCCCGCTAATCAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
||
| CDS-3UTR CCA 90 bp | CTCCTCCATGTTTGGCACTCTCAGACCCTGGCACCTGGCCTGAACGCTTCATGGCTGCGCCAGTATTCCTaGAGCTGGACCCGATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLHVWHSQTLAPGLNASWLRQYS*SWTRSC Trigger: GCAGGATCGGGTCCAGCTCCAGGAATACTGGCGCAG...CCATGAAGCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACATGGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR TCA 90 bp | GGTTCTGCCTCCCCTAGGGCACCCAGACCCTCAGCTCCATTGTCCCCACAGGAGCTGGAACCAGGTTTCTaGTCCACTGGAACCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSASPRAPRPSAPLSPQELEPGF*STGTCV Trigger: TACACAGGTTCCAGTGGATCAGAAACCTGGTTCCAG...CTCCTGTGGGGACAATGGAGCTGAGGGTCTGGGTGCCCTAGGGGAGGCAGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGGTTCTGCCTCCCCTAGGGCACCCAGACCCTCAGCTCCATTGTCCCCACTCTTGAGCCTCTGGTaGAGTCCAGGAGAATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVGSASPRAPRPSAPLSPLLSLW*SPGEWR Trigger: TCTCCATTCTCCTGGACTTCACCAGAGGCTCAAGAG...TGGGGACAATGGAGCTGAGGGTCTGGGTGCCCTAGGGGAGGCAGAACCCACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR TCA 90 bp | CGGGGTCACCATCTTCACCCACAGCTTGACCTGCCGCCCTGGCTGCTCAAAGGTGTTCTTCCTACCTCTTaGGCCTCTGGTGAAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGHHLHPQLDLPPWLLKGVLPTS*ASGEVQ Trigger: CTGGACTTCACCAGAGGCTCAAGAGGTAGGAAGAAC...ACCTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGGGTGAAGATGGTGACCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
||
| CDS-3UTR GCA 90 bp | TTGGAGGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCATCCACTGTGAAAGGTCTGTaGGTGCAGCATCTGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LEARPLSLPCLPFSRSASTVKGL*VQHLLP Trigger: CGGCAGCAGATGCTGCACGCACAGACCTTTCACAGT...GGATGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCCTCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR GCA 90 bp | CATCTTCACCCACAGCTTGACCTGCCGCCCTGGCTGCTCAAAGGTTGCGGAGGTGAAAGGTCCAACCCCTaGGCCAGTATTCCTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLHPQLDLPPWLLKGCGGERSNP*ASIPGA Trigger: AGCTCCAGGAATACTGGCGCAGGGGTTGGACCTTTC...ACCTCCGCAACCTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGGGTGAAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
||
| CDS-3UTR TCA 90 bp | AGGTTGGAGGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCAGGAGAATGGAGACCTTaGGGTCGGAAGGAAACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLEARPLSLPCLPFSRSAGEWRP*GRKETS Trigger: CGAAGTTTCCTTCCGACCTCAAGGTCTCCATTCTCC...TGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCCTCCAACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR TCA 90 bp | TTGGAGGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCATCCGTTCTTCCTACCTCTTaGGCCTCTGGTGAAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LEARPLSLPCLPFSRSASVLPTS*ASGEVQ Trigger: CTGGACTTCACCAGAGGCTCAAGAGGTAGGAAGAAC...GGATGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCCTCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTGGCACTCTCAGACCCTGGCACCTGGCCTGAACGCTTCATGGCTCCCAGTGGTCCTGGCGGTTGGTaGAGTATGAGTCACTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLALSDPGTWPERFMAPSGPGGW*SMSHSG Trigger: ACCTGAGTGACTCATACTTCACCAACCGCCAGGACC...ACTGGGAGCCATGAAGCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCATCCAAACAGCTTCCAGGTCCCGGTaGACTGACCTGTACCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GQASLPTVPPFFTVSIQTASRSR*TDLYPK Trigger: TTTTGGGTACAGGTCAGTTCACCGGGACCTGGAAGC...TGTTTGGATGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132676.8 |
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| CDS-3UTR GCA 90 bp | AGGTCACCACACCAGACCGCAGGTAGAGCTGCTCTTGCTCCTGATGAAGCTGCTTCGTCGCCCTGCAACTaGAAGGATACATCCCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: RSPHQTAGRAALAPDEAASSPCN*KDTSPT Trigger: CGTGGGGGATGTATCCTTGCAGTTGCAGGGCGACGA...AGCAGCTTCATCAGGAGCAAGAGCAGCTCTACCTGCGGTCTGGTGTGGTGACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
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| CDS-3UTR GCA 90 bp | ACTCCTCCATGTTTGGCACTCTCAGACCCTGGCACCTGGCCTGAACGCTTCATGTCGTCGCCCTGCAACTaGAAGGATACATCCCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: TPPCLALSDPGTWPERFMSSPCN*KDTSPT Trigger: CGTGGGGGATGTATCCTTGCAGTTGCAGGGCGACGA...CATGAAGCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACATGGAGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR GCA 90 bp | ATGGCTCCCAGTCACTGGCCTGTCTCTGAAAAGAGTGGGGAGGTTGGAGGCCAGACTGTGAAAGGTCTGTaGGTGCAGCATCTGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: MAPSHWPVSEKSGEVGGQTVKGL*VQHLLP Trigger: CGGCAGCAGATGCTGCACGCACAGACCTTTCACAGT...CTGGCCTCCAACCTCCCCACTCTTTTCAGAGACAGGCCAGTGACTGGGAGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR GCA 90 bp | GGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCATCCAAACAGAAAGGTCCAACCCCTaGGCCAGTATTCCTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQASLPTVPPFFTVSIQTERSNP*ASIPGA Trigger: AGCTCCAGGAATACTGGCGCAGGGGTTGGACCTTTC...TGTTTGGATGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR GCA 90 bp | GACACCCAGACCGGAGTCATTGCTGAAGCCCGGTTGAAGGATCTGACCCCAGTCGAAAGGTCCAACCCCTaGGCCAGTATTCCTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DTQTGVIAEARLKDLTPVERSNP*ASIPGA Trigger: AGCTCCAGGAATACTGGCGCAGGGGTTGGACCTTTC...GACTGGGGTCAGATCCTTCAACCGGGCTTCAGCAATGACTCCGGTCTGGGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR CCA 90 bp | CATCTTCACCCACAGCTTGACCTGCCGCCCTGGCTGCTCAAAGGTTGCGGAGGTAAACCTCTGCAGGAGTaGGAGCAGCATAGTGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLHPQLDLPPWLLKGCGGKPLQE*EQHSAR Trigger: TCTCGCACTATGCTGCTCCCACTCCTGCAGAGGTTT...ACCTCCGCAACCTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGGGTGAAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
||
| CDS-3UTR CCA 90 bp | TTGGAGGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCATCCAAACCTCTGCAGGAGTaGGAGCAGCATAGTGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LEARPLSLPCLPFSRSASKPLQE*EQHSAR Trigger: TCTCGCACTATGCTGCTCCCACTCCTGCAGAGGTTT...GGATGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCCTCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| 3UTR CAA 72 bp | TTCTTGATTAGCGGGGTCACCATCTTCACCCACAGCTaGACCTGCCGCCCTGGCTGCTCAAAGGTTGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLISGVTIFTHS*TCRPGCSKVAE Trigger: CTCCGCAACCTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGGGTGAAGATGGTGACCCCGCTAATCAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
||
| CDS-3UTR TCA 90 bp | GGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCATCCAAACAGGAGAATGGAGACCTTaGGGTCGGAAGGAAACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GQASLPTVPPFFTVSIQTGEWRP*GRKETS Trigger: CGAAGTTTCCTTCCGACCTCAAGGTCTCCATTCTCC...TGTTTGGATGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTGATTAGCGGGGTCACCATCTTCACCCACAGCTTGACCTGCCGCCCTGGCCTCTTGAGCCTCTGGTaGAGTCCAGGAGAATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLISGVTIFTHSLTCRPGLLSLW*SPGEWR Trigger: TCTCCATTCTCCTGGACTTCACCAGAGGCTCAAGAG...GCCAGGGCGGCAGGTCAAGCTGTGGGTGAAGATGGTGACCCCGCTAATCAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
||
| CDS-3UTR TCA 90 bp | TGTTTGGCACTCTCAGACCCTGGCACCTGGCCTGAACGCTTCATGGCTCCCAGTGTTCTTCCTACCTCTTaGGCCTCTGGTGAAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLALSDPGTWPERFMAPSVLPTS*ASGEVQ Trigger: CTGGACTTCACCAGAGGCTCAAGAGGTAGGAAGAAC...ACTGGGAGCCATGAAGCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTGGCACTCTCAGACCCTGGCACCTGGCCTGAACGCTTCATGGCTCCCAGTGCGGTTGGTGAAGTATaGGTCACTCAGGTTTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: CLALSDPGTWPERFMAPSAVGEV*VTQVCT Trigger: GGTGCAAACCTGAGTGACTCATACTTCACCAACCGC...ACTGGGAGCCATGAAGCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTCCATGTTTGGCACTCTCAGACCCTGGCACCTGGCCTGAACGCTTCATGGGCGGTTGGTGAAGTATaGGTCACTCAGGTTTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LLHVWHSQTLAPGLNASWAVGEV*VTQVCT Trigger: GGTGCAAACCTGAGTGACTCATACTTCACCAACCGC...CCATGAAGCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACATGGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR TCA 90 bp | CGGAGTCCTTGGTTCACACTCCTCCATGTTTGGCACTCTCAGACCCTGGCACCTGGTCCTGGCGGTTGGTaGAGTATGAGTCACTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSPWFTLLHVWHSQTLAPGPGGW*SMSHSG Trigger: ACCTGAGTGACTCATACTTCACCAACCGCCAGGACC...AGGTGCCAGGGTCTGAGAGTGCCAAACATGGAGGAGTGTGAACCAAGGACTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTAGGGCACCCAGACCCTCAGCTCCATTGTCCCCACAGGAGCTCGCTGGGATTGGCTATTTTTATCTaGCCCTTCATGAGCTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLGHPDPQLHCPHRSSLGLAIFI*PFMSSK Trigger: CTTCGAGCTCATGAAGGGGCAGATAAAAATAGCCAA...TCCCAGCGAGCTCCTGTGGGGACAATGGAGCTGAGGGTCTGGGTGCCCTAGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
||
| CDS-3UTR GCA 90 bp | CGGAGTCCTTGGTTCACACTCCTCCATGTTTGGCACTCTCAGACCCTGGCACCTACTGTGAAAGGTCTGTaGGTGCAGCATCTGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RSPWFTLLHVWHSQTLAPTVKGL*VQHLLP Trigger: CGGCAGCAGATGCTGCACGCACAGACCTTTCACAGT...AGGTGCCAGGGTCTGAGAGTGCCAAACATGGAGGAGTGTGAACCAAGGACTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTGGCACTCTCAGACCCTGGCACCTGGCCTGAACGCTTCATGGCTCCCAGTGATACTCAGCTCGAGTaGCTAGCACCAGGTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: CLALSDPGTWPERFMAPSDTQLE*LAPGPC Trigger: ACATGGACCTGGTGCTAGGCACTCGAGCTGAGTATC...ACTGGGAGCCATGAAGCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CCA 90 bp | CGGAGTCCTTGGTTCACACTCCTCCATGTTTGGCACTCTCAGACCCTGGCACCTGCTGCAGCCTCTTCCTaGCTCAGCAGAGAATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RSPWFTLLHVWHSQTLAPAAASS*LSRESL Trigger: CAGTGATTCTCTGCTGAGCCAGGAAGAGGCTGCAGC...AGGTGCCAGGGTCTGAGAGTGCCAAACATGGAGGAGTGTGAACCAAGGACTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CCA 90 bp | CGGAGTCCTTGGTTCACACTCCTCCATGTTTGGCACTCTCAGACCCTGGCACCTACAGCCAGAGGCCTTTaGCATGAAAGGTCCAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: RSPWFTLLHVWHSQTLAPTARGL*HERSNP Trigger: GGGGTTGGACCTTTCATGCCAAAGGCCTCTGGCTGT...AGGTGCCAGGGTCTGAGAGTGCCAAACATGGAGGAGTGTGAACCAAGGACTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132676.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCTCCATGTTTGGCACTCTCAGACCCTGGCACCTGGCCTGAACGCTTCATGCTCTTGAGCCTCTGGTaGAGTCCAGGAGAATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPPCLALSDPGTWPERFMLLSLW*SPGEWR Trigger: TCTCCATTCTCCTGGACTTCACCAGAGGCTCAAGAG...CATGAAGCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACATGGAGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR TCA 90 bp | AGCTCTGAGAAGATGCAGCCTCAGAGCCATTACGGCATGCAGAGTCACCTCGGACGTCCACCAGCTCTGTaGAGAAGTCGGCAATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSEKMQPQSHYGMQSHLGRPPAL*RSRQSQ Trigger: CTGAGATTGCCGACTTCTTCACAGAGCTGGTGGACG...TCCGAGGTGACTCTGCATGCCGTAATGGCTCTGAGGCTGCATCTTCTCAGAGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR GCA 90 bp | CGGAGTCCTTGGTTCACACTCCTCCATGTTTGGCACTCTCAGACCCTGGCACCTAGGTACACCTTGATGTaGTGGAGGCCGATGGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSPWFTLLHVWHSQTLAPRYTLM*WRPMVS Trigger: TGAGACCATCGGCCTCCAGCACATCAAGGTGTACCT...AGGTGCCAGGGTCTGAGAGTGCCAAACATGGAGGAGTGTGAACCAAGGACTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCTCCATGTTTGGCACTCTCAGACCCTGGCACCTGGCCTGAACGCTTCATGGATACTCAGCTCGAGTaGCTAGCACCAGGTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: TPPCLALSDPGTWPERFMDTQLE*LAPGPC Trigger: ACATGGACCTGGTGCTAGGCACTCGAGCTGAGTATC...CATGAAGCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACATGGAGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR CCA 90 bp | ATGGCTCCCAGTCACTGGCCTGTCTCTGAAAAGAGTGGGGAGGTTGGAGGCCAGTACACCTTGATGTGCTaGAGGCCGATGGTCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: MAPSHWPVSEKSGEVGGQYTLMC*RPMVSL Trigger: CAATGAGACCATCGGCCTCCAGCACATCAAGGTGTA...CTGGCCTCCAACCTCCCCACTCTTTTCAGAGACAGGCCAGTGACTGGGAGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCTGAGAAGATGCAGCCTCAGAGCCATTACGGCATGCAGAGTCACCTCGGAGGAGAATGGAGACCTTaGGGTCGGAAGGAAACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SSEKMQPQSHYGMQSHLGGEWRP*GRKETS Trigger: CGAAGTTTCCTTCCGACCTCAAGGTCTCCATTCTCC...TCCGAGGTGACTCTGCATGCCGTAATGGCTCTGAGGCTGCATCTTCTCAGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCTGAGAAGATGCAGCCTCAGAGCCATTACGGCATGCAGAGTCACCTCGGACAGGTCCCGGTGAACTaGCCTGTACCCAAAATTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSEKMQPQSHYGMQSHLGQVPVN*PVPKIR Trigger: CCTAATTTTGGGTACAGGTCAGTTCACCGGGACCTG...TCCGAGGTGACTCTGCATGCCGTAATGGCTCTGAGGCTGCATCTTCTCAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132676.8 |
||
| CDS-3UTR GCA 90 bp | CATCAAGGCCATTCCTGTTCTCAGAAGAAGTTCTTGATTAGCGGGGTCACCATCAGCTGGACCCGATCCTaGTGCCCCAGGCTACACACC | + |
|
Preference number: 4 (lower is better) Translates to: HQGHSCSQKKFLISGVTISWTRS*CPRLHT Trigger: GGTGTGTAGCCTGGGGCAGCAGGATCGGGTCCAGCT...GATGGTGACCCCGCTAATCAAGAACTTCTTCTGAGAACAGGAATGGCCTTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
||
| CDS-3UTR CCA 90 bp | AGGTCACCACACCAGACCGCAGGTAGAGCTGCTCTTGCTCCTGATGAAGCTGCTAGGTTTCTGATCCACTaGAACCTGTGTACACCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RSPHQTAGRAALAPDEAARFLIH*NLCTPS Trigger: CGAGGGTGTACACAGGTTCCAGTGGATCAGAAACCT...AGCAGCTTCATCAGGAGCAAGAGCAGCTCTACCTGCGGTCTGGTGTGGTGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017859.10 |
||
| CDS-3UTR CCA 90 bp | ACTCCTCCATGTTTGGCACTCTCAGACCCTGGCACCTGGCCTGAACGCTTCATGAGGTTTCTGATCCACTaGAACCTGTGTACACCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TPPCLALSDPGTWPERFMRFLIH*NLCTPS Trigger: CGAGGGTGTACACAGGTTCCAGTGGATCAGAAACCT...CATGAAGCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACATGGAGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CCA 90 bp | TATTCCCTATGTACACAGAGAGTAGACATTACACAGGAGGGATCAGGAAGGAACCGGGCCCTGGCCGAGTaGATGACGTCCATGACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: YSLCTQRVDITQEGSGRNRALAE*MTSMTR Trigger: GCGGGTCATGGACGTCATCCACTCGGCCAGGGCCCG...GTTCCTTCCTGATCCCTCCTGTGTAATGTCTACTCTCTGTGTACATAGGGAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCTCTGAGAAGATGCAGCCTCAGAGCCATTACGGCATGCAGAGTCACCTCGTACACCTTGATGTGCTaGAGGCCGATGGTCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: EALRRCSLRAITACRVTSYTLMC*RPMVSL Trigger: CAATGAGACCATCGGCCTCCAGCACATCAAGGTGTA...CGAGGTGACTCTGCATGCCGTAATGGCTCTGAGGCTGCATCTTCTCAGAGCTTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCTGAGAAGATGCAGCCTCAGAGCCATTACGGCATGCAGAGTCACCTCGGAGGAGACTCCAAACTCTaGAACCAGGTTTCTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSEKMQPQSHYGMQSHLGGDSKL*NQVSDP Trigger: TGGATCAGAAACCTGGTTCCAGAGTTTGGAGTCTCC...TCCGAGGTGACTCTGCATGCCGTAATGGCTCTGAGGCTGCATCTTCTCAGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCATGTTTATTGTGATTCCAATGCCACGCAGGACACAAACACCATTGGCTGACGCGCACGCGCTCTaGAAACCTCTGCAGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSMFIVIPMPRRTQTPLADAHAL*KPLQEW Trigger: CCACTCCTGCAGAGGTTTCCAGAGCGCGTGCGCGTC...AGCCAATGGTGTTTGTGTCCTGCGTGGCATTGGAATCACAATAAACATGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
||
| CDS-3UTR TCA 90 bp | CATCAAGGCCATTCCTGTTCTCAGAAGAAGTTCTTGATTAGCGGGGTCACCATCCAAAGAGGTACACCTTaGTGTGCTGGAGGCCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HQGHSCSQKKFLISGVTIQRGTP*CAGGRW Trigger: CCATCGGCCTCCAGCACATCAAGGTGTACCTCTTTG...GATGGTGACCCCGCTAATCAAGAACTTCTTCTGAGAACAGGAATGGCCTTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
||
| CDS-3UTR CCA 90 bp | GTTCACACTCCTCCATGTTTGGCACTCTCAGACCCTGGCACCTGGCCTGAACGCGAAGGAAACTTCGCTTaGAGTGACTTTTCTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VHTPPCLALSDPGTWPEREGNFA*SDFSRE Trigger: TTCTCTAGAAAAGTCACTCCAAGCGAAGTTTCCTTC...GCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACATGGAGGAGTGTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CCA 90 bp | TACACAGGAGGGATCAGGAAGGAACATTGCTGGGATCTGAGCTGCGGTCAGTTTTACACCTTGATGTGCTaGAGGCCGATGGTCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: YTGGIRKEHCWDLSCGQFYTLMC*RPMVSL Trigger: CAATGAGACCATCGGCCTCCAGCACATCAAGGTGTA...AAACTGACCGCAGCTCAGATCCCAGCAATGTTCCTTCCTGATCCCTCCTGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR GCA 90 bp | ATATATAACTTATTCCCTATGTACACAGAGAGTAGACATTACACAGGAGGGATCGGGCAGGCTGCTCCCTaGCAGGTACAGCCAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IYNLFPMYTESRHYTGGIGQAAP*QVQPEA Trigger: GGCCTCTGGCTGTACCTGGCAGGGAGCAGCCTGCCC...GATCCCTCCTGTGTAATGTCTACTCTCTGTGTACATAGGGAATAAGTTATATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132676.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCTCCATGTTTGGCACTCTCAGACCCTGGCACCTGGCCTGAACGCTTCATGGAAGGAAACTTCGCTTaGAGTGACTTTTCTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TPPCLALSDPGTWPERFMEGNFA*SDFSRE Trigger: TTCTCTAGAAAAGTCACTCCAAGCGAAGTTTCCTTC...CATGAAGCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACATGGAGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR TCA 90 bp | TTCTCCATGTTTATTGTGATTCCAATGCCACGCAGGACACAAACACCATTGGCTCAAAGAGGTACACCTTaGTGTGCTGGAGGCCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: FSMFIVIPMPRRTQTPLAQRGTP*CAGGRW Trigger: CCATCGGCCTCCAGCACATCAAGGTGTACCTCTTTG...AGCCAATGGTGTTTGTGTCCTGCGTGGCATTGGAATCACAATAAACATGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
||
| 3UTR CAA 72 bp | CTTCATCAAGGCCATTCCTGTTCTCAGAAGAAGTTCTaGATTAGCGGGGTCACCATCTTCACCCACAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHQGHSCSQKKF*ISGVTIFTHSL Trigger: CAAGCTGTGGGTGAAGATGGTGACCCCGCTAATCAAGAACTTCTTCTGAGAACAGGAATGGCCTTGATGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
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| CDS-3UTR GCA 90 bp | TATTCCCTATGTACACAGAGAGTAGACATTACACAGGAGGGATCAGGAAGGAACGAGCTCGAAGAACTCTaGAGGGGAAGACAGTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: YSLCTQRVDITQEGSGRNELEEL*RGRQYP Trigger: AGGGTACTGTCTTCCCCTGCAGAGTTCTTCGAGCTC...GTTCCTTCCTGATCCCTCCTGTGTAATGTCTACTCTCTGTGTACATAGGGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
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| CDS-3UTR GCA 90 bp | TACACAGGAGGGATCAGGAAGGAACATTGCTGGGATCTGAGCTGCGGTCAGTTTTTGGCTATTTTTATCTaGCCCTTCATGAGCTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YTGGIRKEHCWDLSCGQFLAIFI*PFMSSK Trigger: CTTCGAGCTCATGAAGGGGCAGATAAAAATAGCCAA...AAACTGACCGCAGCTCAGATCCCAGCAATGTTCCTTCCTGATCCCTCCTGTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
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| CDS-3UTR CCA 90 bp | TATTCCCTATGTACACAGAGAGTAGACATTACACAGGAGGGATCAGGAAGGAACAAACCTCTGCAGGAGTaGGAGCAGCATAGTGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YSLCTQRVDITQEGSGRNKPLQE*EQHSAR Trigger: TCTCGCACTATGCTGCTCCCACTCCTGCAGAGGTTT...GTTCCTTCCTGATCCCTCCTGTGTAATGTCTACTCTCTGTGTACATAGGGAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR CCA 90 bp | ATATATAACTTATTCCCTATGTACACAGAGAGTAGACATTACACAGGAGGGATCGACGCGCACGCGCTCTaGAAACCTCTGCAGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IYNLFPMYTESRHYTGGIDAHAL*KPLQEW Trigger: CCACTCCTGCAGAGGTTTCCAGAGCGCGTGCGCGTC...GATCCCTCCTGTGTAATGTCTACTCTCTGTGTACATAGGGAATAAGTTATATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| 3UTR CAA 72 bp | ATTGTGATTCCAATGCCACGCAGGACACAAACACCATaGGCTAGGATAAGAGACAACAGCAGTCTGGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: IVIPMPRRTQTP*ARIRDNSSLAK Trigger: CTTAGCCAGACTGCTGTTGTCTCTTATCCTAGCCAATGGTGTTTGTGTCCTGCGTGGCATTGGAATCACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
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| CDS-3UTR CCA 90 bp | ATATATAACTTATTCCCTATGTACACAGAGAGTAGACATTACACAGGAGGGATCGACCTGAGGAACGGTTaGGGACAGCAAGGGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IYNLFPMYTESRHYTGGIDLRNG*GQQGSQ Trigger: TTGGCTCCCTTGCTGTCCCCAACCGTTCCTCAGGTC...GATCCCTCCTGTGTAATGTCTACTCTCTGTGTACATAGGGAATAAGTTATATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
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| CDS-3UTR CCA 90 bp | ATATATAACTTATTCCCTATGTACACAGAGAGTAGACATTACACAGGAGGGATCGCTGCAGCCTCTTCCTaGCTCAGCAGAGAATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: IYNLFPMYTESRHYTGGIAAASS*LSRESL Trigger: CAGTGATTCTCTGCTGAGCCAGGAAGAGGCTGCAGC...GATCCCTCCTGTGTAATGTCTACTCTCTGTGTACATAGGGAATAAGTTATATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS-3UTR TCA 90 bp | ATATATAACTTATTCCCTATGTACACAGAGAGTAGACATTACACAGGAGGGATCCTGGAACCAGGTTTCTaGTCCACTGGAACCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IYNLFPMYTESRHYTGGILEPGF*STGTCV Trigger: TACACAGGTTCCAGTGGATCAGAAACCTGGTTCCAG...GATCCCTCCTGTGTAATGTCTACTCTCTGTGTACATAGGGAATAAGTTATATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
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| CDS-3UTR CCA 90 bp | TATTCCCTATGTACACAGAGAGTAGACATTACACAGGAGGGATCAGGAAGGAACGAAGGAAACTTCGCTTaGAGTGACTTTTCTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YSLCTQRVDITQEGSGRNEGNFA*SDFSRE Trigger: TTCTCTAGAAAAGTCACTCCAAGCGAAGTTTCCTTC...GTTCCTTCCTGATCCCTCCTGTGTAATGTCTACTCTCTGTGTACATAGGGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS TCA 90 bp | TCCCCGGCAGCTGCAGCCTCTTCCTGGCTCAGCAGAGAATCACTGTaGAAGGTCTGTGCGTGCAGCATCTGCTGCCGGGCCCTGGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPAAAASSWLSRESL*KVCACSICCRALAE Trigger: CTCGGCCAGGGCCCGGCAGCAGATGCTGCACGCACAGACCTTTCACAGTGATTCTCTGCTGAGCCAGGAAGAGGCTGCAGCTGCCGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS GCA 90 bp | CCGGGCCCTGGCCGAGTGGATGACGTCCATGACCCGCTTGTTCGCTaGTCTGCAGTACGCAGCCCGGTCACCTTTGTAAGGGTGCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: PGPGRVDDVHDPLVR*SAVRSPVTFVRVHH Trigger: ATGGTGCACCCTTACAAAGGTGACCGGGCTGCGTACTGCAGAGCAGCGAACAAGCGGGTCATGGACGTCATCCACTCGGCCAGGGCCCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS GCA 90 bp | TGGGTAAATCCAGGTGTCGGGCGCTGGCCTCCGGTCCCCGGCAGCTaGAGCCTCTTCCTGGCTCAGCAGAGAATCACTGTGAAAGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WVNPGVGRWPPVPGS*SLFLAQQRITVKGL Trigger: CAGACCTTTCACAGTGATTCTCTGCTGAGCCAGGAAGAGGCTGCAGCTGCCGGGGACCGGAGGCCAGCGCCCGACACCTGGATTTACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CAA 90 bp | GACCCTCAGCTCCATTGTCCCCACAGGAGCTCGCTGGGACACCCAGACCGGAGTGGAGTCCTCGGAGGTTaGGTGTGTGGAAGAGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: DPQLHCPHRSSLGHPDRSGVLGG*VCGRGR Trigger: TCTCCCTCTTCCACACACCAAACCTCCGAGGACTCC...ACTCCGGTCTGGGTGTCCCAGCGAGCTCCTGTGGGGACAATGGAGCTGAGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS CCA 90 bp | CGCTCAGGGATAAGGAGTCGGAGGAGTCCTCGGAGGTTTGGTGTGTaGAAGAGGGAGACGCGCACGCGCTCTGGAAACCTCTGCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RSGIRSRRSPRRFGV*KRETRTRSGNLCRS Trigger: ACTCCTGCAGAGGTTTCCAGAGCGCGTGCGCGTCTCCCTCTTCCACACACCAAACCTCCGAGGACTCCTCCGACTCCTTATCCCTGAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS CCA 90 bp | GCTCCTGATGAAGCTGCTGCTGCAGGGACCGGCTCTCCGTCACGATaGCAATCTGGGCTTCCAGGTCCCGGTGAACTGACCTGTACCCAA | + |
|
Preference number: 5 (lower is better) Translates to: APDEAAAAGTGSPSR*QSGLPGPGELTCTQ Trigger: TTGGGTACAGGTCAGTTCACCGGGACCTGGAAGCCCAGATTGCCATCGTGACGGAGAGCCGGTCCCTGCAGCAGCAGCTTCATCAGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132676.8 |
||
| CDS-3UTR CAA 90 bp | GGTTCTGCCTCCCCTAGGGCACCCAGACCCTCAGCTCCATTGTCCCCACAGGAGAGGCCGATGGTCTCATaGAAGCGCTCAGGGATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSASPRAPRPSAPLSPQERPMVS*KRSGIR Trigger: CCTTATCCCTGAGCGCTTCAATGAGACCATCGGCCT...CTCCTGTGGGGACAATGGAGCTGAGGGTCTGGGTGCCCTAGGGGAGGCAGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS TCA 90 bp | GGAACCTGTGTACACCCTCGGGACATAGGCAGCAAGGTGGGGAGGTaGCCTGAGGAACGGTTGGGGACAGCAAGGGAGCCAATAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GTCVHPRDIGSKVGR*PEERLGTAREPITA Trigger: GGCTGTTATTGGCTCCCTTGCTGTCCCCAACCGTTCCTCAGGTCACCTCCCCACCTTGCTGCCTATGTCCCGAGGGTGTACACAGGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCTCCCAGTCACTGGCCTGTCTCTGAAAAGAGTGGGGAGGTTGGAGGCCAGCTGGCTGCTCAAAGGTaGCGGAGGTCACCACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: MAPSHWPVSEKSGEVGGQLAAQR*RRSPHQ Trigger: CTGGTGTGGTGACCTCCGCAACCTTTGAGCAGCCAG...CTGGCCTCCAACCTCCCCACTCTTTTCAGAGACAGGCCAGTGACTGGGAGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132676.8 |
||
| CDS TCA 90 bp | CTGTGTACACCCTCGGGACATAGGCAGCAAGGTGGGGAGGTGACCTaGGGAACGGTTGGGGACAGCAAGGGAGCCAATAACAGCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LCTPSGHRQQGGEVT*GTVGDSKGANNSHG Trigger: ACCATGGCTGTTATTGGCTCCCTTGCTGTCCCCAACCGTTCCTCAGGTCACCTCCCCACCTTGCTGCCTATGTCCCGAGGGTGTACACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
||
| CDS GCA 90 bp | TGCACCATCCCATCCACAACCTCCACTGTGTCGTCGCCCTGCAACTaGAAGGATACATCCCCCACGGCGTCCACCAGCTCTGTGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CTIPSTTSTVSSPCN*KDTSPTASTSSVKK Trigger: CTTCTTCACAGAGCTGGTGGACGCCGTGGGGGATGTATCCTTGCAGTTGCAGGGCGACGACACAGTGGAGGTTGTGGATGGGATGGTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS CCA 90 bp | TCCTCGGAGGTTTGGTGTGTGGAAGAGGGAGACGCGCACGCGCTCTaGAAACCTCTGCAGGAGTGGGAGCAGCATAGTGCGAGAGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSEVWCVEEGDAHAL*KPLQEWEQHSARVL Trigger: AAGAACTCTCGCACTATGCTGCTCCCACTCCTGCAGAGGTTTCCAGAGCGCGTGCGCGTCTCCCTCTTCCACACACCAAACCTCCGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS CCA 90 bp | ATTGAAGCGCTCAGGGATAAGGAGTCGGAGGAGTCCTCGGAGGTTTaGTGTGTGGAAGAGGGAGACGCGCACGCGCTCTGGAAACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IEALRDKESEESSEV*CVEEGDAHALWKPL Trigger: CAGAGGTTTCCAGAGCGCGTGCGCGTCTCCCTCTTCCACACACCAAACCTCCGAGGACTCCTCCGACTCCTTATCCCTGAGCGCTTCAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS CCA 90 bp | ACACACCTCACTGTAGAACTGTCGCTCAATGTGCACATAGGCGGCTaGGATGGCGCCCGCCACGCCCTTAGCCCCAAAGAAGCCATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: THLTVELSLNVHIGG*DGARHALSPKEAIH Trigger: GTGAATGGCTTCTTTGGGGCTAAGGGCGTGGCGGGCGCCATCCCAGCCGCCTATGTGCACATTGAGCGACAGTTCTACAGTGAGGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCATCCAAAGGCCGATGGTCTCATaGAAGCGCTCAGGGATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGQASLPTVPPFFTVSIQRPMVS*KRSGIR Trigger: CCTTATCCCTGAGCGCTTCAATGAGACCATCGGCCT...TTGGATGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CAA 90 bp | ACCCACAGCTTGACCTGCCGCCCTGGCTGCTCAAAGGTTGCGGAGGTCACCACATCAAAGAGGTACACCTaGATGTGCTGGAGGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: THSLTCRPGCSKVAEVTTSKRYT*MCWRPM Trigger: CATCGGCCTCCAGCACATCAAGGTGTACCTCTTTGA...TGTGGTGACCTCCGCAACCTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
||
| CDS TCA 90 bp | CCTGCAACTGCAAGGATACATCCCCCACGGCGTCCACCAGCTCTGTaGAGAAGTCGGCAATCTCAGCGCAGTCCTGCAAGAACACGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PATARIHPPRRPPAL*RSRQSQRSPARTRS Trigger: GCTACGTGTTCTTGCAGGACTGCGCTGAGATTGCCGACTTCTTCACAGAGCTGGTGGACGCCGTGGGGGATGTATCCTTGCAGTTGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS GCA 90 bp | AAAATTAGGAGAGCCAATCAGCGTGAGGCAGGGCAGGCTGCTCCCTaGCAGGTACAGCCAGAGGCCTTTGGCATGAAAGGTCCAACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KIRRANQREAGQAAP*QVQPEAFGMKGPTP Trigger: AGGGGTTGGACCTTTCATGCCAAAGGCCTCTGGCTGTACCTGGCAGGGAGCAGCCTGCCCTGCCTCACGCTGATTGGCTCTCCTAATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132676.8 |
||
| CDS-3UTR CAA 90 bp | AGGTCACCACACCAGACCGCAGGTAGAGCTGCTCTTGCTCCTGATGAAGCTGCTGGAGTCCTCGGAGGTTaGGTGTGTGGAAGAGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RSPHQTAGRAALAPDEAAGVLGG*VCGRGR Trigger: TCTCCCTCTTCCACACACCAAACCTCCGAGGACTCC...AGCAGCTTCATCAGGAGCAAGAGCAGCTCTACCTGCGGTCTGGTGTGGTGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
||
| CDS-3UTR CAA 90 bp | ATGGCTCCCAGTCACTGGCCTGTCTCTGAAAAGAGTGGGGAGGTTGGAGGCCAGAGGCCGATGGTCTCATaGAAGCGCTCAGGGATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: MAPSHWPVSEKSGEVGGQRPMVS*KRSGIR Trigger: CCTTATCCCTGAGCGCTTCAATGAGACCATCGGCCT...CTGGCCTCCAACCTCCCCACTCTTTTCAGAGACAGGCCAGTGACTGGGAGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTGGAGGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCATCAAAGAGGTACACCTaGATGTGCTGGAGGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: RLEARPLSLPCLPFSRSASKRYT*MCWRPM Trigger: CATCGGCCTCCAGCACATCAAGGTGTACCTCTTTGA...TGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCCTCCAACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS GCA 90 bp | TTTGGTGTGTGGAAGAGGGAGACGCGCACGCGCTCTGGAAACCTCTaGAGGAGTGGGAGCAGCATAGTGCGAGAGTTCTTCCTACCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FGVWKRETRTRSGNL*RSGSSIVREFFLPL Trigger: AAGAGGTAGGAAGAACTCTCGCACTATGCTGCTCCCACTCCTGCAGAGGTTTCCAGAGCGCGTGCGCGTCTCCCTCTTCCACACACCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CAA 90 bp | CGGGGTCACCATCTTCACCCACAGCTTGACCTGCCGCCCTGGCTGCTCAAAGGTATCACAACTCGCCTCTaGGCTATTTTTATCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RGHHLHPQLDLPPWLLKGITTRL*AIFICP Trigger: GGGGCAGATAAAAATAGCCAAGAGGCGAGTTGTGAT...ACCTTTGAGCAGCCAGGGCGGCAGGTCAAGCTGTGGGTGAAGATGGTGACCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017859.10 |
||
| CDS-3UTR CAA 90 bp | ATGGCTCCCAGTCACTGGCCTGTCTCTGAAAAGAGTGGGGAGGTTGGAGGCCAGTCAAAGAGGTACACCTaGATGTGCTGGAGGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: MAPSHWPVSEKSGEVGGQSKRYT*MCWRPM Trigger: CATCGGCCTCCAGCACATCAAGGTGTACCTCTTTGA...CTGGCCTCCAACCTCCCCACTCTTTTCAGAGACAGGCCAGTGACTGGGAGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTGGGTTCTGCCTCCCCTAGGGCACCCAGACCCTCAGCTCCATTGTCCATCACAACTCGCCTCTaGGCTATTTTTATCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QTVGSASPRAPRPSAPLSITTRL*AIFICP Trigger: GGGGCAGATAAAAATAGCCAAGAGGCGAGTTGTGAT...GGACAATGGAGCTGAGGGTCTGGGTGCCCTAGGGGAGGCAGAACCCACTGTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTGGAGGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCACTCAGGATGACGTTGTaGTCAAAGAGGTACACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLEARPLSLPCLPFSRSALRMTL*SKRYTL Trigger: CAAGGTGTACCTCTTTGACAACAACGTCATCCTGAG...TGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCCTCCAACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CAA 90 bp | CCATGTTTGGCACTCTCAGACCCTGGCACCTGGCCTGAACGCTTCATGGCTCCCCTCAGGATGACGTTGTaGTCAAAGAGGTACACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PCLALSDPGTWPERFMAPLRMTL*SKRYTL Trigger: CAAGGTGTACCTCTTTGACAACAACGTCATCCTGAG...GGGAGCCATGAAGCGTTCAGGCCAGGTGCCAGGGTCTGAGAGTGCCAAACATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CAA 90 bp | GACACCCAGACCGGAGTCATTGCTGAAGCCCGGTTGAAGGATCTGACCCCAGTCCCACTCAGGATGACGTaGTTGTCAAAGAGGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: DTQTGVIAEARLKDLTPVPLRMT*LSKRYT Trigger: GGTGTACCTCTTTGACAACAACGTCATCCTGAGTGG...GACTGGGGTCAGATCCTTCAACCGGGCTTCAGCAATGACTCCGGTCTGGGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CAA 90 bp | GGCCAGGCCTCTCTCCCTACCGTGCCTCCCTTTTTCACGGTCAGCATCCAAACACCACTCAGGATGACGTaGTTGTCAAAGAGGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: GQASLPTVPPFFTVSIQTPLRMT*LSKRYT Trigger: GGTGTACCTCTTTGACAACAACGTCATCCTGAGTGG...TGTTTGGATGCTGACCGTGAAAAAGGGAGGCACGGTAGGGAGAGAGGCCTGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS CCA 90 bp | AGGGGAAGACAGTACCCTGACATGAGAGCTGGAGACTCCAAACTCTaGAACCAGGTTTCTGATCCACTGGAACCTGTGTACACCCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RGRQYPDMRAGDSKL*NQVSDPLEPVYTLG Trigger: CCCGAGGGTGTACACAGGTTCCAGTGGATCAGAAACCTGGTTCCAGAGTTTGGAGTCTCCAGCTCTCATGTCAGGGTACTGTCTTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CAA 90 bp | CGGAGTCCTTGGTTCACACTCCTCCATGTTTGGCACTCTCAGACCCTGGCACCTCTCAGGATGACGTTGTaGTCAAAGAGGTACACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSPWFTLLHVWHSQTLAPLRMTL*SKRYTL Trigger: CAAGGTGTACCTCTTTGACAACAACGTCATCCTGAG...AGGTGCCAGGGTCTGAGAGTGCCAAACATGGAGGAGTGTGAACCAAGGACTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS TCA 90 bp | GCAGTCCTGCAAGAACACGTAGCGGTCCTGGCGGTTGGTGAAGTATaGGTCACTCAGGTTTGCACCACTCAGGATGACGTTGTTGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: AVLQEHVAVLAVGEV*VTQVCTTQDDVVVK Trigger: TTTGACAACAACGTCATCCTGAGTGGTGCAAACCTGAGTGACTCATACTTCACCAACCGCCAGGACCGCTACGTGTTCTTGCAGGACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS GCA 90 bp | GCACCACTCAGGATGACGTTGTTGTCAAAGAGGTACACCTTGATGTaGTGGAGGCCGATGGTCTCATTGAAGCGCTCAGGGATAAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: APLRMTLLSKRYTLM*WRPMVSLKRSGIRS Trigger: ACTCCTTATCCCTGAGCGCTTCAATGAGACCATCGGCCTCCAGCACATCAAGGTGTACCTCTTTGACAACAACGTCATCCTGAGTGGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS TCA 90 bp | TTCATGAGCTCGAAGAACTCTGCAGGGGAAGACAGTACCCTGACATaGGAGCTGGAGACTCCAAACTCTGGAACCAGGTTTCTGATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FMSSKNSAGEDSTLT*ELETPNSGTRFLIH Trigger: GTGGATCAGAAACCTGGTTCCAGAGTTTGGAGTCTCCAGCTCTCATGTCAGGGTACTGTCTTCCCCTGCAGAGTTCTTCGAGCTCATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CAA 90 bp | TATTCCCTATGTACACAGAGAGTAGACATTACACAGGAGGGATCAGGAAGGAACGGAGTCCTCGGAGGTTaGGTGTGTGGAAGAGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YSLCTQRVDITQEGSGRNGVLGG*VCGRGR Trigger: TCTCCCTCTTCCACACACCAAACCTCCGAGGACTCC...GTTCCTTCCTGATCCCTCCTGTGTAATGTCTACTCTCTGTGTACATAGGGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS-3UTR CAA 90 bp | TGTTCTCAGAAGAAGTTCTTGATTAGCGGGGTCACCATCTTCACCCACAGCTTGCCACTCAGGATGACGTaGTTGTCAAAGAGGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: CSQKKFLISGVTIFTHSLPLRMT*LSKRYT Trigger: GGTGTACCTCTTTGACAACAACGTCATCCTGAGTGG...CAAGCTGTGGGTGAAGATGGTGACCCCGCTAATCAAGAACTTCTTCTGAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 |
||
| CDS CAA 72 bp | CGGGCCCTGGCCGAGTGGATGACGTCCATGACCCGCTaGTTCGCTGCTCTGCAGTACGCAGCCCGGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: RALAEWMTSMTR*FAALQYAARSP Trigger: AGGTGACCGGGCTGCGTACTGCAGAGCAGCGAACAAGCGGGTCATGGACGTCATCCACTCGGCCAGGGCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS CCA 72 bp | GAAGCTGCTGCTGCAGGGACCGGCTCTCCGTCACGATaGCAATCTGGGCTTCCAGGTCCCGGTGAACTGACC | + |
|
Preference number: 6 (lower is better) Translates to: EAAAAGTGSPSR*QSGLPGPGELT Trigger: GGTCAGTTCACCGGGACCTGGAAGCCCAGATTGCCATCGTGACGGAGAGCCGGTCCCTGCAGCAGCAGCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132676.8 |
||
| CDS TCA 72 bp | GTACACCCTCGGGACATAGGCAGCAAGGTGGGGAGGTaGCCTGAGGAACGGTTGGGGACAGCAAGGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VHPRDIGSKVGR*PEERLGTAREP Trigger: TGGCTCCCTTGCTGTCCCCAACCGTTCCTCAGGTCACCTCCCCACCTTGCTGCCTATGTCCCGAGGGTGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
||
| CDS CCA 72 bp | CTCAGGGATAAGGAGTCGGAGGAGTCCTCGGAGGTTTaGTGTGTGGAAGAGGGAGACGCGCACGCGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRDKESEESSEV*CVEEGDAHALW Trigger: CCAGAGCGCGTGCGCGTCTCCCTCTTCCACACACCAAACCTCCGAGGACTCCTCCGACTCCTTATCCCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS TCA 72 bp | CCCTCGGGACATAGGCAGCAAGGTGGGGAGGTGACCTaGGGAACGGTTGGGGACAGCAAGGGAGCCAATAAC | + |
|
Preference number: 6 (lower is better) Translates to: PSGHRQQGGEVT*GTVGDSKGANN Trigger: GTTATTGGCTCCCTTGCTGTCCCCAACCGTTCCTCAGGTCACCTCCCCACCTTGCTGCCTATGTCCCGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
||
| CDS TCA 72 bp | CTGCTCCCTGCCAGGTACAGCCAGAGGCCTTTGGCATaGAAGGTCCAACCCCTGCGCCAGTATTCCTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLPARYSQRPLA*KVQPLRQYSWS Trigger: GCTCCAGGAATACTGGCGCAGGGGTTGGACCTTTCATGCCAAAGGCCTCTGGCTGTACCTGGCAGGGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132676.8 |
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| CDS GCA 72 bp | ACCATCCCATCCACAACCTCCACTGTGTCGTCGCCCTaGAACTGCAAGGATACATCCCCCACGGCGTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: TIPSTTSTVSSP*NCKDTSPTAST Trigger: GGTGGACGCCGTGGGGGATGTATCCTTGCAGTTGCAGGGCGACGACACAGTGGAGGTTGTGGATGGGATGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS GCA 72 bp | TTCCTGGCTCAGCAGAGAATCACTGTGAAAGGTCTGTaGGTGCAGCATCTGCTGCCGGGCCCTGGCCGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: FLAQQRITVKGL*VQHLLPGPGRV Trigger: CACTCGGCCAGGGCCCGGCAGCAGATGCTGCACGCACAGACCTTTCACAGTGATTCTCTGCTGAGCCAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS CCA 72 bp | GTTTGGTGTGTGGAAGAGGGAGACGCGCACGCGCTCTaGAAACCTCTGCAGGAGTGGGAGCAGCATAGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: VWCVEEGDAHAL*KPLQEWEQHSA Trigger: CGCACTATGCTGCTCCCACTCCTGCAGAGGTTTCCAGAGCGCGTGCGCGTCTCCCTCTTCCACACACCAAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS CCA 72 bp | ATAAGGAGTCGGAGGAGTCCTCGGAGGTTTGGTGTGTaGAAGAGGGAGACGCGCACGCGCTCTGGAAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: IRSRRSPRRFGV*KRETRTRSGNL Trigger: GAGGTTTCCAGAGCGCGTGCGCGTCTCCCTCTTCCACACACCAAACCTCCGAGGACTCCTCCGACTCCTTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS CCA 72 bp | ACTGTAGAACTGTCGCTCAATGTGCACATAGGCGGCTaGGATGGCGCCCGCCACGCCCTTAGCCCCAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TVELSLNVHIGG*DGARHALSPKE Trigger: TTCTTTGGGGCTAAGGGCGTGGCGGGCGCCATCCCAGCCGCCTATGTGCACATTGAGCGACAGTTCTACAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS TCA 72 bp | GCAAGGATACATCCCCCACGGCGTCCACCAGCTCTGTaGAGAAGTCGGCAATCTCAGCGCAGTCCTGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: ARIHPPRRPPAL*RSRQSQRSPAR Trigger: TCTTGCAGGACTGCGCTGAGATTGCCGACTTCTTCACAGAGCTGGTGGACGCCGTGGGGGATGTATCCTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS GCA 72 bp | CCGGTGAGGCTAGAAGGATCTGATACTCAGCTCGAGTaGCTAGCACCAGGTCCATGTAGGCCTGGGTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PVRLEGSDTQLE*LAPGPCRPGSG Trigger: ACCTGACCCAGGCCTACATGGACCTGGTGCTAGGCACTCGAGCTGAGTATCAGATCCTTCTAGCCTCACCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS CAA 72 bp | AGGTACACCTTGATGTGCTGGAGGCCGATGGTCTCATaGAAGCGCTCAGGGATAAGGAGTCGGAGGAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RYTLMCWRPMVS*KRSGIRSRRSP Trigger: AGGACTCCTCCGACTCCTTATCCCTGAGCGCTTCAATGAGACCATCGGCCTCCAGCACATCAAGGTGTACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS TCA 72 bp | AGTCCTGCAAGAACACGTAGCGGTCCTGGCGGTTGGTaGAGTATGAGTCACTCAGGTTTGCACCACTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPARTRSGPGGW*SMSHSGLHHSG Trigger: TCCTGAGTGGTGCAAACCTGAGTGACTCATACTTCACCAACCGCCAGGACCGCTACGTGTTCTTGCAGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS TCA 72 bp | AAGAAGCCATTCACCTCCGGTGAGGCTAGAAGGATCTaGTACTCAGCTCGAGTGCCTAGCACCAGGTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: KKPFTSGEARRI*YSARVPSTRSM Trigger: CATGGACCTGGTGCTAGGCACTCGAGCTGAGTATCAGATCCTTCTAGCCTCACCGGAGGTGAATGGCTTCTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS CAA 90 bp | TTGTCAAAGAGGTACACCTTGATGTGCTGGAGGCCGATGGTCTCATaGAAGCGCTCAGGGATAAGGAGTCGGAGGAGTCCTCGGAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSKRYTLMCWRPMVS*KRSGIRSRRSPRRF Trigger: AAACCTCCGAGGACTCCTCCGACTCCTTATCCCTGAGCGCTTCAATGAGACCATCGGCCTCCAGCACATCAAGGTGTACCTCTTTGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS TCA 72 bp | CAAGAACACGTAGCGGTCCTGGCGGTTGGTGAAGTATaGGTCACTCAGGTTTGCACCACTCAGGATGACGTT | + |
|
Preference number: 6 (lower is better) Translates to: QEHVAVLAVGEV*VTQVCTTQDDV Trigger: AACGTCATCCTGAGTGGTGCAAACCTGAGTGACTCATACTTCACCAACCGCCAGGACCGCTACGTGTTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS GCA 72 bp | AGGATGACGTTGTTGTCAAAGAGGTACACCTTGATGTaGTGGAGGCCGATGGTCTCATTGAAGCGCTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RMTLLSKRYTLM*WRPMVSLKRSG Trigger: CCCTGAGCGCTTCAATGAGACCATCGGCCTCCAGCACATCAAGGTGTACCTCTTTGACAACAACGTCATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS CCA 72 bp | GAGACTCCAAACTCTGGAACCAGGTTTCTGATCCACTaGAACCTGTGTACACCCTCGGGACATAGGCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: ETPNSGTRFLIH*NLCTPSGHRQQ Trigger: TTGCTGCCTATGTCCCGAGGGTGTACACAGGTTCCAGTGGATCAGAAACCTGGTTCCAGAGTTTGGAGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
||
| CDS CAA 72 bp | GAGTCACTCAGGTTTGCACCACTCAGGATGACGTTGTaGTCAAAGAGGTACACCTTGATGTGCTGGAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ESLRFAPLRMTL*SKRYTLMCWRP Trigger: CGGCCTCCAGCACATCAAGGTGTACCTCTTTGACAACAACGTCATCCTGAGTGGTGCAAACCTGAGTGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
||
| CDS CAA 90 bp | AGGTTTGCACCACTCAGGATGACGTTGTTGTCAAAGAGGTACACCTaGATGTGCTGGAGGCCGATGGTCTCATTGAAGCGCTCAGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: RFAPLRMTLLSKRYT*MCWRPMVSLKRSGI Trigger: TATCCCTGAGCGCTTCAATGAGACCATCGGCCTCCAGCACATCAAGGTGTACCTCTTTGACAACAACGTCATCCTGAGTGGTGCAAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS TCA 72 bp | TCGAAGAACTCTGCAGGGGAAGACAGTACCCTGACATaGGAGCTGGAGACTCCAAACTCTGGAACCAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SKNSAGEDSTLT*ELETPNSGTRF Trigger: AAACCTGGTTCCAGAGTTTGGAGTCTCCAGCTCTCATGTCAGGGTACTGTCTTCCCCTGCAGAGTTCTTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
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| CDS CCA 72 bp | CAGTACCCTGACATGAGAGCTGGAGACTCCAAACTCTaGAACCAGGTTTCTGATCCACTGGAACCTGTGTAC | + |
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Preference number: 6 (lower is better) Translates to: QYPDMRAGDSKL*NQVSDPLEPVY Trigger: GTACACAGGTTCCAGTGGATCAGAAACCTGGTTCCAGAGTTTGGAGTCTCCAGCTCTCATGTCAGGGTACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
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| CDS CAA 90 bp | TTCCTACCTCTTGAGCCTCTGGTGAAGTCCAGGAGAATGGAGACCTaGAGGTCGGAAGGAAACTTCGCTTGGAGTGACTTTTCTAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: FLPLEPLVKSRRMET*RSEGNFAWSDFSRE Trigger: TTCTCTAGAAAAGTCACTCCAAGCGAAGTTTCCTTCCGACCTCAAGGTCTCCATTCTCCTGGACTTCACCAGAGGCTCAAGAGGTAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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| CDS GCA 72 bp | TTCCTGTTCCAAAGGTCCTGTCCCCAAGTAGAGGGATaGCATCACAACTCGCCTCTTGGCTATTTTTATCTG | + |
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Preference number: 6 (lower is better) Translates to: FLFQRSCPQVEG*HHNSPLGYFYL Trigger: CAGATAAAAATAGCCAAGAGGCGAGTTGTGATGGCATCCCTCTACTTGGGGACAGGACCTTTGGAACAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017859.10 ENSMUST00000132676.8 |
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| CDS CAA 72 bp | TATGAGTCACTCAGGTTTGCACCACTCAGGATGACGTaGTTGTCAAAGAGGTACACCTTGATGTGCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: YESLRFAPLRMT*LSKRYTLMCWR Trigger: CCTCCAGCACATCAAGGTGTACCTCTTTGACAACAACGTCATCCTGAGTGGTGCAAACCTGAGTGACTCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017859.10 ENSMUST00000100185.10 ENSMUST00000132676.8 |
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