Pregenerated sensors for PGRMC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049940Ensembl transcript IDs: ENSMUST00000058578.8
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGAGGCTATTCCAGCATGCTACGAGTGTAGCACCGCTCGCCCTCTaGTTCCCATCGAACCCGAGCTTCTGCTTGCACTGCACCCGTCAG | + |
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Preference number: 1 (lower is better) Translates to: WRLFQHATSVAPLAL*FPSNPSFCLHCTRQ Trigger: CTGACGGGTGCAGTGCAAGCAGAAGCTCGGGTTCGATGGGAAGCAGAGGGCGAGCGGTGCTACACTCGTAGCATGCTGGAATAGCCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR TCA 90 bp | TCACTCACACAGACATTCATACCACGGCCCTGCTACCCACACCAGTaGCGAGTGAGGGTCAGACTCCTAAAATTAGGCAGCTGTTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: SLTQTFIPRPCYPHQ*RVRVRLLKLGSCWG Trigger: TCCCCAACAGCTGCCTAATTTTAGGAGTCTGACCCTCACTCGTCACTGGTGTGGGTAGCAGGGCCGTGGTATGAATGTCTGTGTGAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR GCA 90 bp | CACTGTAATATCCCTTCTTACCTGAACCACCCACAGAGGTGGACCTaGCTTGGAAGTTACACTGAGCATGGGACACGGACAGCTTGGCTA | + |
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Preference number: 1 (lower is better) Translates to: HCNIPSYLNHPQRWT*LGSYTEHGTRTAWL Trigger: TAGCCAAGCTGTCCGTGTCCCATGCTCAGTGTAACTTCCAAGGCAGGTCCACCTCTGTGGGTGGTTCAGGTAAGAAGGGATATTACAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR GCA 90 bp | GTACAATACTGTGTTTCTATGTCAGTTCCTACTTTGGAAGGCTGGTaGTTCCAGCACACTGAGTGGCAGCGAGGCCTGAGAGCACTGTCC | + |
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Preference number: 1 (lower is better) Translates to: VQYCVSMSVPTLEGW*FQHTEWQRGLRALS Trigger: GGACAGTGCTCTCAGGCCTCGCTGCCACTCAGTGTGCTGGAAGCACCAGCCTTCCAAAGTAGGAACTGACATAGAAACACAGTATTGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR CCA 90 bp | ACTGTCCACTGTAATATCCCTTCTTACCTGAACCACCCACAGAGGTaGACCTGCCTTGGAAGTTACACTGAGCATGGGACACGGACAGCT | + |
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Preference number: 1 (lower is better) Translates to: TVHCNIPSYLNHPQR*TCLGSYTEHGTRTA Trigger: AGCTGTCCGTGTCCCATGCTCAGTGTAACTTCCAAGGCAGGTCCACCTCTGTGGGTGGTTCAGGTAAGAAGGGATATTACAGTGGACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR CCA 90 bp | ATGTCAGTTCCTACTTTGGAAGGCTGGTGCTTCCAGCACACTGAGTaGCAGCGAGGCCTGAGAGCACTGTCCACTGTAATATCCCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: MSVPTLEGWCFQHTE*QRGLRALSTVISLL Trigger: AAGAAGGGATATTACAGTGGACAGTGCTCTCAGGCCTCGCTGCCACTCAGTGTGCTGGAAGCACCAGCCTTCCAAAGTAGGAACTGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR TCA 90 bp | TCATCCTCAGATCTTCAGTCAGGCAGATTATCTTGTTCACGCTGGTaGGGTGTTTCTCACAGCAGGAGCATCACACCCAAAGACTGGACA | + |
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Preference number: 1 (lower is better) Translates to: SSSDLQSGRLSCSRW*GVSHSRSITPKDWT Trigger: TGTCCAGTCTTTGGGTGTGATGCTCCTGCTGTGAGAAACACCTCACCAGCGTGAACAAGATAATCTGCCTGACTGAAGATCTGAGGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR TCA 90 bp | TCCCTGCCCAGGGCTCTTCCCTTAACACAAATAAAACACAGCCTGTaGAACAGTATCCCTTGCTTTCCAGAGATCTGCACACTGAGTAGC | + |
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Preference number: 1 (lower is better) Translates to: SLPRALPLTQIKHSL*NSIPCFPEICTLSS Trigger: GCTACTCAGTGTGCAGATCTCTGGAAAGCAAGGGATACTGTTTCACAGGCTGTGTTTTATTTGTGTTAAGGGAAGAGCCCTGGGCAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR TCA 90 bp | AGTTACACTGAGCATGGGACACGGACAGCTTGGCTAGTCAGGGCCTaGTTTTCATTTCTAAGAGGGTTTCCCCCTCATCGTGAATCAAAT | + |
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Preference number: 1 (lower is better) Translates to: SYTEHGTRTAWLVRA*FSFLRGFPPHRESN Trigger: ATTTGATTCACGATGAGGGGGAAACCCTCTTAGAAATGAAAATCAGGCCCTGACTAGCCAAGCTGTCCGTGTCCCATGCTCAGTGTAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR TCA 90 bp | CAAAAGGTGGATGCAGTGTTTCTCAAACATGTCCAATCGTACGTTTaGTTGGAGGAACCACAAACAGATTTAGGCTCAGTGGATAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: QKVDAVFLKHVQSYV*LEEPQTDLGSVDRK Trigger: CTTCCTATCCACTGAGCCTAAATCTGTTTGTGGTTCCTCCAATCAAACGTACGATTGGACATGTTTGAGAAACACTGCATCCACCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR GCA 90 bp | TTTTATTGTATGGCAAACATGGACCACACAACTTCAAAAGGTGGATaGAGTGTTTCTCAAACATGTCCAATCGTACGTTTGATTGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: FYCMANMDHTTSKGG*SVSQTCPIVRLIGG Trigger: TCCTCCAATCAAACGTACGATTGGACATGTTTGAGAAACACTGCATCCACCTTTTGAAGTTGTGTGGTCCATGTTTGCCATACAATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR CCA 90 bp | CAACTTTTATTGTATGGCAAACATGGACCACACAACTTCAAAAGGTaGATGCAGTGTTTCTCAAACATGTCCAATCGTACGTTTGATTGG | + |
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Preference number: 1 (lower is better) Translates to: QLLLYGKHGPHNFKR*MQCFSNMSNRTFDW Trigger: CCAATCAAACGTACGATTGGACATGTTTGAGAAACACTGCATCCACCTTTTGAAGTTGTGTGGTCCATGTTTGCCATACAATAAAAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCAGACTCACTCACACAGACATTCATACCACGGCCCTGCTACCCACACCAGTTACGAGCTGCAGTTCTaGAGGCCCCTGGCTTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: IQTHSHRHSYHGPATHTSYELQF*RPLALV Trigger: AACCAAAGCCAGGGGCCTTCAGAACTGCAGCTCGTA...ACTGGTGTGGGTAGCAGGGCCGTGGTATGAATGTCTGTGTGAGTGAGTCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR CAA 90 bp | CACAACCAACGCCTCATCCTCAGATCTTCAGTCAGGCAGATTATCTaGTTCACGCTGGTGAGGTGTTTCTCACAGCAGGAGCATCACACC | + |
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Preference number: 2 (lower is better) Translates to: HNQRLILRSSVRQII*FTLVRCFSQQEHHT Trigger: GGTGTGATGCTCCTGCTGTGAGAAACACCTCACCAGCGTGAACAAGATAATCTGCCTGACTGAAGATCTGAGGATGAGGCGTTGGTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR CAA 90 bp | TACTGGCTATGGGTACAATACTGTGTTTCTATGTCAGTTCCTACTTaGGAAGGCTGGTGCTTCCAGCACACTGAGTGGCAGCGAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: YWLWVQYCVSMSVPT*EGWCFQHTEWQRGL Trigger: CAGGCCTCGCTGCCACTCAGTGTGCTGGAAGCACCAGCCTTCCAAAGTAGGAACTGACATAGAAACACAGTATTGTACCCATAGCCAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCAGACTCACTCACACAGACATTCATACCACGGCCCTGCTACCCACACCAGTATTTACCCCCTTCTCTaGCAAAGCCCGGAAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: IQTHSHRHSYHGPATHTSIYPLL*QSPERK Trigger: TTTTCTTTCCGGGCTTTGTCAGAGAAGGGGGTAAAT...ACTGGTGTGGGTAGCAGGGCCGTGGTATGAATGTCTGTGTGAGTGAGTCTGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCTCTTCCCTTAACACAAATAAAACACAGCCTGTGAAACAGTATCCCTTGGAAAGGGGTACGAGCTaGAGTTCTGAAGGCCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: QGSSLNTNKTQPVKQYPLERGTS*SSEGPW Trigger: CCAGGGGCCTTCAGAACTGCAGCTCGTACCCCTTTC...CAAGGGATACTGTTTCACAGGCTGTGTTTTATTTGTGTTAAGGGAAGAGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR TCA 90 bp | TACTGTGTTTCTATGTCAGTTCCTACTTTGGAAGGCTGGTGCTTCCAGCACACTATATCCCTTCTTACCTaGACCACCCACAGAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: YCVSMSVPTLEGWCFQHTISLLT*TTHRGG Trigger: TCCACCTCTGTGGGTGGTTCAGGTAAGAAGGGATAT...AGTGTGCTGGAAGCACCAGCCTTCCAAAGTAGGAACTGACATAGAAACACAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR TCA 90 bp | CGTGAATCAAATGCAGTATTAGTACATGACACACTGGCTCACGGCTCTGTATTTAGACTGGACATTCTCTaGAAGGGGTACGAGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: RESNAVLVHDTLAHGSVFRLDIL*KGYELQ Trigger: CTGCAGCTCGTACCCCTTTCAGAGAATGTCCAGTCT...AAATACAGAGCCGTGAGCCAGTGTGTCATGTACTAATACTGCATTTGATTCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTTTCTATGTCAGTTCCTACTTTGGAAGGCTGGTGCTTCCAGCACACTGAGTCCTGAACTTCTTAAATaGATATGCAACCCCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: VFLCQFLLWKAGASSTLSPELLK*ICNPSS Trigger: GGAAGAGGGGTTGCATATTCATTTAAGAAGTTCAGG...ACTCAGTGTGCTGGAAGCACCAGCCTTCCAAAGTAGGAACTGACATAGAAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR TCA 90 bp | TACATGACACACTGGCTCACGGCTCTGTATTTAGAGTCCGACTCGAGCTTATTTATTCTACACACAGAATaGCATCAGCCTCAGGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: YMTHWLTALYLESDSSLFILHTE*HQPQAQ Trigger: TTGAGCCTGAGGCTGATGTCATTCTGTGTGTAGAAT...AAATAAGCTCGAGTCGGACTCTAAATACAGAGCCGTGAGCCAGTGTGTCATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR GCA 90 bp | TACTGTGTTTCTATGTCAGTTCCTACTTTGGAAGGCTGGTGCTTCCAGCACACTTGCTTTCCAGAGATCTaGACACTGAGTAGCAAATAC | + |
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Preference number: 2 (lower is better) Translates to: YCVSMSVPTLEGWCFQHTCFPEI*TLSSKY Trigger: GTATTTGCTACTCAGTGTGCAGATCTCTGGAAAGCA...AGTGTGCTGGAAGCACCAGCCTTCCAAAGTAGGAACTGACATAGAAACACAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR CCA 90 bp | TACTGTGTTTCTATGTCAGTTCCTACTTTGGAAGGCTGGTGCTTCCAGCACACTAAATTAGGCAGCTGTTaGGGAAGAGTAGTTGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: YCVSMSVPTLEGWCFQHTKLGSC*GRVVGF Trigger: AAAACCAACTACTCTTCCCCAACAGCTGCCTAATTT...AGTGTGCTGGAAGCACCAGCCTTCCAAAGTAGGAACTGACATAGAAACACAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR TCA 90 bp | GAACCACAAACAGATTTAGGCTCAGTGGATAGGAAGAATGTATACTTTGGAGCTACTCTTCAGTCTCCTTaGGTTCTTCAGACAGGATGT | + |
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Preference number: 2 (lower is better) Translates to: EPQTDLGSVDRKNVYFGATLQSP*VLQTGC Trigger: ACATCCTGTCTGAAGAACTCAAGGAGACTGAAGAGT...AGCTCCAAAGTATACATTCTTCCTATCCACTGAGCCTAAATCTGTTTGTGGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR TCA 90 bp | CGTGAATCAAATGCAGTATTAGTACATGACACACTGGCTCACGGCTCTGTATTTCAATTAATATTGATTTaGCCTAGCGGAAGGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: RESNAVLVHDTLAHGSVFQLILI*PSGRKG Trigger: TCCCTTCCTTCCGCTAGGTCAAATCAATATTAATTG...AAATACAGAGCCGTGAGCCAGTGTGTCATGTACTAATACTGCATTTGATTCACG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR GCA 90 bp | GAACCACAAACAGATTTAGGCTCAGTGGATAGGAAGAATGTATACTTTGGAGCTGTTTCAAATTATCGTTaGTGGGAACTGCTGACTTCA | + |
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Preference number: 2 (lower is better) Translates to: EPQTDLGSVDRKNVYFGAVSNYR*WELLTS Trigger: TGAAGTCAGCAGTTCCCAGCAACGATAATTTGAAAC...AGCTCCAAAGTATACATTCTTCCTATCCACTGAGCCTAAATCTGTTTGTGGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAACATGTCCAATCGTACGTTTGATTGGAGGAACCACAAACAGATTTAGGCCGGAAAGAAAAGTTTaGGAATTCACGTTTGAATGT | + |
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Preference number: 2 (lower is better) Translates to: SQTCPIVRLIGGTTNRFRPERKV*EFTFEC Trigger: ACATTCAAACGTGAATTCCCAAACTTTTCTTTCCGG...CCTAAATCTGTTTGTGGTTCCTCCAATCAAACGTACGATTGGACATGTTTGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAACATGTCCAATCGTACGTTTGATTGGAGGAACCACAAACAGATTTAGGTTGTGTTCTAACATATaGCAGTTAACACTGAGTACT | + |
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Preference number: 2 (lower is better) Translates to: SQTCPIVRLIGGTTNRFRLCSNI*QLTLST Trigger: AGTACTCAGTGTTAACTGCCATATGTTAGAACACAA...CCTAAATCTGTTTGTGGTTCCTCCAATCAAACGTACGATTGGACATGTTTGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR GCA 72 bp | TTCCAGCATGCTACGAGTGTAGCACCGCTCGCCCTCTaGTTCCCATCGAACCCGAGCTTCTGCTTGCACTGC | + |
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Preference number: 3 (lower is better) Translates to: FQHATSVAPLAL*FPSNPSFCLHC Trigger: GCAGTGCAAGCAGAAGCTCGGGTTCGATGGGAAGCAGAGGGCGAGCGGTGCTACACTCGTAGCATGCTGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR GCA 72 bp | GTGGTGACAAGCACACTTCTGGAGGCTATTCCAGCATaGTACGAGTGTAGCACCGCTCGCCCTCTGCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: VVTSTLLEAIPA*YECSTARPLLP Trigger: GGGAAGCAGAGGGCGAGCGGTGCTACACTCGTAGCATGCTGGAATAGCCTCCAGAAGTGTGCTTGTCACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR TCA 72 bp | CAGACATTCATACCACGGCCCTGCTACCCACACCAGTaGCGAGTGAGGGTCAGACTCCTAAAATTAGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: QTFIPRPCYPHQ*RVRVRLLKLGS Trigger: GCTGCCTAATTTTAGGAGTCTGACCCTCACTCGTCACTGGTGTGGGTAGCAGGGCCGTGGTATGAATGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR GCA 72 bp | CCCAAAGACTGGACATTCTCTGAAAGGGGTACGAGCTaGAGTTCTGAAGGCCCCTGGCTTTGGTTGCTCACA | + |
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Preference number: 3 (lower is better) Translates to: PKDWTFSERGTS*SSEGPWLWLLT Trigger: TGTGAGCAACCAAAGCCAGGGGCCTTCAGAACTGCAGCTCGTACCCCTTTCAGAGAATGTCCAGTCTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR GCA 72 bp | ATCCCTTCTTACCTGAACCACCCACAGAGGTGGACCTaGCTTGGAAGTTACACTGAGCATGGGACACGGACA | + |
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Preference number: 3 (lower is better) Translates to: IPSYLNHPQRWT*LGSYTEHGTRT Trigger: TGTCCGTGTCCCATGCTCAGTGTAACTTCCAAGGCAGGTCCACCTCTGTGGGTGGTTCAGGTAAGAAGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR TCA 72 bp | GAGCATGGGACACGGACAGCTTGGCTAGTCAGGGCCTaGTTTTCATTTCTAAGAGGGTTTCCCCCTCATCGT | + |
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Preference number: 3 (lower is better) Translates to: EHGTRTAWLVRA*FSFLRGFPPHR Trigger: ACGATGAGGGGGAAACCCTCTTAGAAATGAAAATCAGGCCCTGACTAGCCAAGCTGTCCGTGTCCCATGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR GCA 72 bp | TGTGTTTCTATGTCAGTTCCTACTTTGGAAGGCTGGTaGTTCCAGCACACTGAGTGGCAGCGAGGCCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: CVSMSVPTLEGW*FQHTEWQRGLR Trigger: TCTCAGGCCTCGCTGCCACTCAGTGTGCTGGAAGCACCAGCCTTCCAAAGTAGGAACTGACATAGAAACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR TCA 72 bp | CTGAGAGCACTGTCCACTGTAATATCCCTTCTTACCTaGACCACCCACAGAGGTGGACCTGCCTTGGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: LRALSTVISLLT*TTHRGGPALEV Trigger: AACTTCCAAGGCAGGTCCACCTCTGTGGGTGGTTCAGGTAAGAAGGGATATTACAGTGGACAGTGCTCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR CCA 72 bp | GGTGTTTCTCACAGCAGGAGCATCACACCCAAAGACTaGACATTCTCTGAAAGGGGTACGAGCTGCAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: GVSHSRSITPKD*TFSERGTSCSS Trigger: AGAACTGCAGCTCGTACCCCTTTCAGAGAATGTCCAGTCTTTGGGTGTGATGCTCCTGCTGTGAGAAACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR CCA 72 bp | TGTAATATCCCTTCTTACCTGAACCACCCACAGAGGTaGACCTGCCTTGGAAGTTACACTGAGCATGGGACA | + |
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Preference number: 3 (lower is better) Translates to: CNIPSYLNHPQR*TCLGSYTEHGT Trigger: TGTCCCATGCTCAGTGTAACTTCCAAGGCAGGTCCACCTCTGTGGGTGGTTCAGGTAAGAAGGGATATTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR CCA 72 bp | GGGTACAATACTGTGTTTCTATGTCAGTTCCTACTTTaGAAGGCTGGTGCTTCCAGCACACTGAGTGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: GYNTVFLCQFLL*KAGASSTLSGS Trigger: GCTGCCACTCAGTGTGCTGGAAGCACCAGCCTTCCAAAGTAGGAACTGACATAGAAACACAGTATTGTACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR TCA 72 bp | GATCTTCAGTCAGGCAGATTATCTTGTTCACGCTGGTaGGGTGTTTCTCACAGCAGGAGCATCACACCCAAA | + |
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Preference number: 3 (lower is better) Translates to: DLQSGRLSCSRW*GVSHSRSITPK Trigger: TTTGGGTGTGATGCTCCTGCTGTGAGAAACACCTCACCAGCGTGAACAAGATAATCTGCCTGACTGAAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR TCA 72 bp | TCTTCAGTCTCCTTGAGTTCTTCAGACAGGATGTGGTaGCAAGCACACTTCTGGAGGCTATTCCAGCATGCT | + |
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Preference number: 3 (lower is better) Translates to: SSVSLSSSDRMW*QAHFWRLFQHA Trigger: AGCATGCTGGAATAGCCTCCAGAAGTGTGCTTGTCACCACATCCTGTCTGAAGAACTCAAGGAGACTGAAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR CAA 90 bp | TACATGACACACTGGCTCACGGCTCTGTATTTAGAGTCCGACTCGAGCTTATTTGTGAAACAGTATCCCTaGCTTTCCAGAGATCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: YMTHWLTALYLESDSSLFVKQYP*LSRDLH Trigger: GTGCAGATCTCTGGAAAGCAAGGGATACTGTTTCAC...AAATAAGCTCGAGTCGGACTCTAAATACAGAGCCGTGAGCCAGTGTGTCATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR CAA 90 bp | TCTCAAACATGTCCAATCGTACGTTTGATTGGAGGAACCACAAACAGATTTAGGAGAGGTGGACCTGCCTaGGAAGTTACACTGAGCATG | + |
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Preference number: 3 (lower is better) Translates to: SQTCPIVRLIGGTTNRFRRGGPA*EVTLSM Trigger: CATGCTCAGTGTAACTTCCAAGGCAGGTCCACCTCT...CCTAAATCTGTTTGTGGTTCCTCCAATCAAACGTACGATTGGACATGTTTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR CAA 90 bp | TCTCAAACATGTCCAATCGTACGTTTGATTGGAGGAACCACAAACAGATTTAGGGACCCGGTGACTTTCTaGCTGTTAAGAAGGTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: SQTCPIVRLIGGTTNRFRDPVTF*LLRRSC Trigger: ACAGGACCTTCTTAACAGCAAGAAAGTCACCGGGTC...CCTAAATCTGTTTGTGGTTCCTCCAATCAAACGTACGATTGGACATGTTTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR TCA 72 bp | AGGGCTCTTCCCTTAACACAAATAAAACACAGCCTGTaGAACAGTATCCCTTGCTTTCCAGAGATCTGCACA | + |
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Preference number: 3 (lower is better) Translates to: RALPLTQIKHSL*NSIPCFPEICT Trigger: TGTGCAGATCTCTGGAAAGCAAGGGATACTGTTTCACAGGCTGTGTTTTATTTGTGTTAAGGGAAGAGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR TCA 72 bp | GATGCAGTGTTTCTCAAACATGTCCAATCGTACGTTTaGTTGGAGGAACCACAAACAGATTTAGGCTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: DAVFLKHVQSYV*LEEPQTDLGSV Trigger: CACTGAGCCTAAATCTGTTTGTGGTTCCTCCAATCAAACGTACGATTGGACATGTTTGAGAAACACTGCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR CCA 72 bp | TTGTATGGCAAACATGGACCACACAACTTCAAAAGGTaGATGCAGTGTTTCTCAAACATGTCCAATCGTACG | + |
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Preference number: 3 (lower is better) Translates to: LYGKHGPHNFKR*MQCFSNMSNRT Trigger: CGTACGATTGGACATGTTTGAGAAACACTGCATCCACCTTTTGAAGTTGTGTGGTCCATGTTTGCCATACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR TCA 72 bp | GAAACAGTATCCCTTGCTTTCCAGAGATCTGCACACTaGGTAGCAAATACCTATCTGGTTGTCTTTGATACT | + |
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Preference number: 3 (lower is better) Translates to: ETVSLAFQRSAH*VANTYLVVFDT Trigger: AGTATCAAAGACAACCAGATAGGTATTTGCTACTCAGTGTGCAGATCTCTGGAAAGCAAGGGATACTGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR CCA 72 bp | GGGAAAGAAATAAAACTGGTTTCAAATTATCGTTGCTaGGAACTGCTGACTTCAATCCGCTGGATATTCCTC | + |
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Preference number: 3 (lower is better) Translates to: GKEIKLVSNYRC*ELLTSIRWIFL Trigger: GAGGAATATCCAGCGGATTGAAGTCAGCAGTTCCCAGCAACGATAATTTGAAACCAGTTTTATTTCTTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR TCA 72 bp | GAAGAATGTATACTTTGGAGCTGGGATGTAAATGGTTaGGCAATATGTGAAGCCCTGTGTCTGAATTCTAAC | + |
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Preference number: 3 (lower is better) Translates to: EECILWSWDVNG*AICEALCLNSN Trigger: GTTAGAATTCAGACACAGGGCTTCACATATTGCTCAACCATTTACATCCCAGCTCCAAAGTATACATTCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR-3UTR CAA 90 bp | TTTACATATAAAGGAAGCACTTCCCAACACTCTTCAGTCTCCTTGAGTTCTTCACCGACTCGAGCTTATTaGGTTTATTGTACATGCTTT | + |
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Preference number: 3 (lower is better) Translates to: FTYKGSTSQHSSVSLSSSPTRAY*VYCTCF Trigger: AAAGCATGTACAATAAACCAAATAAGCTCGAGTCGG...TGAAGAACTCAAGGAGACTGAAGAGTGTTGGGAAGTGCTTCCTTTATATGTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS-3UTR GCA 90 bp | TACTGTGTTTCTATGTCAGTTCCTACTTTGGAAGGCTGGTGCTTCCAGCACACTGCGCCGCCACCCAACTaGTCCTCGCCGCCGTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: YCVSMSVPTLEGWCFQHTAPPPN*SSPPSL Trigger: GAGCGACGGCGGCGAGGAGCAGTTGGGTGGCGGCGC...AGTGTGCTGGAAGCACCAGCCTTCCAAAGTAGGAACTGACATAGAAACACAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS-3UTR GCA 90 bp | ATCCAGACTCACTCACACAGACATTCATACCACGGCCCTGCTACCCACACCAGTCGCCGCTCCCCAGGGTaGTTAGCTTTACGTCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: IQTHSHRHSYHGPATHTSRRSPG*LALRPH Trigger: ATGGGGACGTAAAGCTAAGCACCCTGGGGAGCGGCG...ACTGGTGTGGGTAGCAGGGCCGTGGTATGAATGTCTGTGTGAGTGAGTCTGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS-3UTR GCA 90 bp | TGGATGCAGTGTTTCTCAAACATGTCCAATCGTACGTTTGATTGGAGGAACCACAGTCCCGCTTCTTCATaGGCGGCAGCGTGGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: WMQCFSNMSNRTFDWRNHSPASS*AAAWRP Trigger: CGGCCGCCACGCTGCCGCGCATGAAGAAGCGGGACT...GTGGTTCCTCCAATCAAACGTACGATTGGACATGTTTGAGAAACACTGCATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS-3UTR GCA 90 bp | CCATTCTACACACAGAATGACATCAGCCTCAGGCTCAATGCTGCTTGTAGTGACCCCTGCCAGCAAAGATaGCATATGGACCCGCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: PFYTQNDISLRLNAACSDPCQQR*HMDPRG Trigger: GCCCCGCGGGTCCATATGGCATCTTTGCTGGCAGGG...GTCACTACAAGCAGCATTGAGCCTGAGGCTGATGTCATTCTGTGTGTAGAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS-3UTR CCA 90 bp | AACAGTATCCCTTGCTTTCCAGAGATCTGCACACTGAGTAGCAAATACCTATCTCGCGCCCCGTCGTACTaGCGCAGCTGCTCCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: NSIPCFPEICTLSSKYLSRAPSY*RSCSRL Trigger: CAGCCTGGAGCAGCTGCGCCAGTACGACGGGGCGCG...AGATAGGTATTTGCTACTCAGTGTGCAGATCTCTGGAAAGCAAGGGATACTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS-3UTR TCA 90 bp | GTGTTTCTATGTCAGTTCCTACTTTGGAAGGCTGGTGCTTCCAGCACACTGAGTCGAAGACTTTCCCATTaGCCGCGAGCAGGATGCGCG | + |
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Preference number: 4 (lower is better) Translates to: VFLCQFLLWKAGASSTLSRRLSH*PRAGCA Trigger: CGCGCATCCTGCTCGCGGTCAATGGGAAAGTCTTCG...ACTCAGTGTGCTGGAAGCACCAGCCTTCCAAAGTAGGAACTGACATAGAAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS-3UTR GCA 90 bp | TACTGTGTTTCTATGTCAGTTCCTACTTTGGAAGGCTGGTGCTTCCAGCACACTTCGTACTGGCGCAGCTaGTCCAGGCTGAAGTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: YCVSMSVPTLEGWCFQHTSYWRS*SRLKSR Trigger: GCGGGACTTCAGCCTGGAGCAGCTGCGCCAGTACGA...AGTGTGCTGGAAGCACCAGCCTTCCAAAGTAGGAACTGACATAGAAACACAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS-3UTR TCA 90 bp | GTGTTTCTATGTCAGTTCCTACTTTGGAAGGCTGGTGCTTCCAGCACACTGAGTCTCATCTGTGTACTCTaGTGGCTCCTCCCCTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: VFLCQFLLWKAGASSTLSLICVL*WLLPWL Trigger: AAGCCAGGGGAGGAGCCATCAGAGTACACAGATGAG...ACTCAGTGTGCTGGAAGCACCAGCCTTCCAAAGTAGGAACTGACATAGAAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR CAA 72 bp | CGCCTCATCCTCAGATCTTCAGTCAGGCAGATTATCTaGTTCACGCTGGTGAGGTGTTTCTCACAGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RLILRSSVRQII*FTLVRCFSQQE Trigger: CTCCTGCTGTGAGAAACACCTCACCAGCGTGAACAAGATAATCTGCCTGACTGAAGATCTGAGGATGAGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS-3UTR TCA 90 bp | CGTGAATCAAATGCAGTATTAGTACATGACACACTGGCTCACGGCTCTGTATTTGCAGCTGCTCCAGGCTaGAGTCCCGCTTCTTCATGC | + |
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Preference number: 4 (lower is better) Translates to: RESNAVLVHDTLAHGSVFAAAPG*SPASSC Trigger: GCATGAAGAAGCGGGACTTCAGCCTGGAGCAGCTGC...AAATACAGAGCCGTGAGCCAGTGTGTCATGTACTAATACTGCATTTGATTCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS-3UTR TCA 90 bp | GCAACAAATTCACCTGGCAGCACAACCAACGCCTCATCCTCAGATCTTCAGTCACAGTCCTGTTTACTGTaGTCCTTGGTGTCCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: ATNSPGSTTNASSSDLQSQSCLL*SLVSSS Trigger: TGAGGAGGACACCAAGGATCACAGTAAACAGGACTG...TGACTGAAGATCTGAGGATGAGGCGTTGGTTGTGCTGCCAGGTGAATTTGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS-3UTR GCA 90 bp | CTACCCACACCAGTGACGAGTGAGGGTCAGACTCCTAAAATTAGGCAGCTGTTGCGAACACTCTCCATTTaGACTGCGTTCAAATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LPTPVTSEGQTPKIRQLLRTLSI*TAFKSE Trigger: CTCAGATTTGAACGCAGTGCAAATGGAGAGTGTTCG...CAACAGCTGCCTAATTTTAGGAGTCTGACCCTCACTCGTCACTGGTGTGGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS-3UTR GCA 90 bp | CGTGAATCAAATGCAGTATTAGTACATGACACACTGGCTCACGGCTCTGTATTTGGCCGTAGAACTTGCTaGCTTTGGTCACGTCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: RESNAVLVHDTLAHGSVFGRRTC*LWSRRR Trigger: TCTTCGACGTGACCAAAGGCAGCAAGTTCTACGGCC...AAATACAGAGCCGTGAGCCAGTGTGTCATGTACTAATACTGCATTTGATTCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS-3UTR TCA 90 bp | TGGATGCAGTGTTTCTCAAACATGTCCAATCGTACGTTTGATTGGAGGAACCACCACTGCGTTCAAATCTaGGAGGTCGTCATATTCATC | + |
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Preference number: 4 (lower is better) Translates to: WMQCFSNMSNRTFDWRNHHCVQI*EVVIFI Trigger: GATGAATATGACGACCTCTCAGATTTGAACGCAGTG...GTGGTTCCTCCAATCAAACGTACGATTGGACATGTTTGAGAAACACTGCATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS-3UTR CCA 90 bp | AACAGTATCCCTTGCTTTCCAGAGATCTGCACACTGAGTAGCAAATACCTATCTAGAACTTGCTGCCTTTaGTCACGTCGAAGACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: NSIPCFPEICTLSSKYLSRTCCL*SRRRLS Trigger: GGAAAGTCTTCGACGTGACCAAAGGCAGCAAGTTCT...AGATAGGTATTTGCTACTCAGTGTGCAGATCTCTGGAAAGCAAGGGATACTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS-3UTR CCA 90 bp | AACAGTATCCCTTGCTTTCCAGAGATCTGCACACTGAGTAGCAAATACCTATCTGTTTACTGTGATCCTTaGTGTCCTCCTCATCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: NSIPCFPEICTLSSKYLSVYCDP*CPPHLC Trigger: ACACAGATGAGGAGGACACCAAGGATCACAGTAAAC...AGATAGGTATTTGCTACTCAGTGTGCAGATCTCTGGAAAGCAAGGGATACTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| 3UTR CAA 72 bp | GGATGCAGTGTTTCTCAAACATGTCCAATCGTACGTTaGATTGGAGGAACCACAAACAGATTTAGGCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: GCSVSQTCPIVR*IGGTTNRFRLS Trigger: ACTGAGCCTAAATCTGTTTGTGGTTCCTCCAATCAAACGTACGATTGGACATGTTTGAGAAACACTGCATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS-3UTR GCA 90 bp | AACAGTATCCCTTGCTTTCCAGAGATCTGCACACTGAGTAGCAAATACCTATCTCTGGCTTTAGGAGTCTaGCTACATAATCATATTTTT | + |
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Preference number: 4 (lower is better) Translates to: NSIPCFPEICTLSSKYLSLALGV*LHNHIF Trigger: AAAAATATGATTATGTAGGCAGACTCCTAAAGCCAG...AGATAGGTATTTGCTACTCAGTGTGCAGATCTCTGGAAAGCAAGGGATACTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS TCA 90 bp | TGCGCGGCGTGCGCGCCCCGTCGTACTGGCGCAGCTGCTCCAGGCTaGAGTCCCGCTTCTTCATGCGCGGCAGCGTGGCGGCCGGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: CAACAPRRTGAAAPG*SPASSCAAAWRPGS Trigger: AGAGCCCGGCCGCCACGCTGCCGCGCATGAAGAAGCGGGACTTCAGCCTGGAGCAGCTGCGCCAGTACGACGGGGCGCGCACGCCGCGCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS GCA 90 bp | GCGAGCAGGATGCGCGGCGTGCGCGCCCCGTCGTACTGGCGCAGCTaGTCCAGGCTGAAGTCCCGCTTCTTCATGCGCGGCAGCGTGGCG | + |
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Preference number: 5 (lower is better) Translates to: ASRMRGVRAPSYWRS*SRLKSRFFMRGSVA Trigger: CGCCACGCTGCCGCGCATGAAGAAGCGGGACTTCAGCCTGGAGCAGCTGCGCCAGTACGACGGGGCGCGCACGCCGCGCATCCTGCTCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS CCA 90 bp | CCATTGACCGCGAGCAGGATGCGCGGCGTGCGCGCCCCGTCGTACTaGCGCAGCTGCTCCAGGCTGAAGTCCCGCTTCTTCATGCGCGGC | + |
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Preference number: 5 (lower is better) Translates to: PLTASRMRGVRAPSY*RSCSRLKSRFFMRG Trigger: GCCGCGCATGAAGAAGCGGGACTTCAGCCTGGAGCAGCTGCGCCAGTACGACGGGGCGCGCACGCCGCGCATCCTGCTCGCGGTCAATGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS-3UTR CAA 90 bp | AGGAGCATCACACCCAAAGACTGGACATTCTCTGAAAGGGGTACGAGCTGCAGTTCGAAGACTTTCCCATaGACCGCGAGCAGGATGCGC | + |
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Preference number: 5 (lower is better) Translates to: RSITPKDWTFSERGTSCSSKTFP*TASRMR Trigger: GCGCATCCTGCTCGCGGTCAATGGGAAAGTCTTCGA...ACTGCAGCTCGTACCCCTTTCAGAGAATGTCCAGTCTTTGGGTGTGATGCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS TCA 72 bp | TGCGCGCCCCGTCGTACTGGCGCAGCTGCTCCAGGCTaGAGTCCCGCTTCTTCATGCGCGGCAGCGTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: CAPRRTGAAAPG*SPASSCAAAWR Trigger: CCGCCACGCTGCCGCGCATGAAGAAGCGGGACTTCAGCCTGGAGCAGCTGCGCCAGTACGACGGGGCGCGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS GCA 72 bp | ATGCGCGGCGTGCGCGCCCCGTCGTACTGGCGCAGCTaGTCCAGGCTGAAGTCCCGCTTCTTCATGCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: MRGVRAPSYWRS*SRLKSRFFMRG Trigger: GCCGCGCATGAAGAAGCGGGACTTCAGCCTGGAGCAGCTGCGCCAGTACGACGGGGCGCGCACGCCGCGCAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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| CDS GCA 72 bp | CCAGGCAGAATGTCGCCAGCCCCCTGGAGGCGTCCCTaGCAGCAAAGATGCCATATGGACCCGCGGGGCCGT | + |
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Preference number: 6 (lower is better) Translates to: PGRMSPAPWRRP*QQRCHMDPRGR Trigger: ACGGCCCCGCGGGTCCATATGGCATCTTTGCTGGCAGGGACGCCTCCAGGGGGCTGGCGACATTCTGCCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058578.8 |
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