Pregenerated sensors for PGR15L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031212Ensembl transcript IDs: ENSMUST00000033556.4
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCAGCAACCAAAATCCAAGTTTAATAGCCCAGAACAAAGAAATATaGAAAAGTGAGCACCTGGGTGAAATGTTGAAAGGAGACAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: GSNQNPSLIAQNKEI*KSEHLGEMLKGDSV Trigger: AACACTGTCTCCTTTCAACATTTCACCCAGGTGCTCACTTTTCCATATTTCTTTGTTCTGGGCTATTAAACTTGGATTTTGGTTGCTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR TCA 90 bp | CCCAGAACAAAGAAATATGGAAAAGTGAGCACCTGGGTGAAATGTTaGAAGGAGACAGTGTTGGAATCTACAGGTATATGTTTAAATGCG | + |
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Preference number: 1 (lower is better) Translates to: PRTKKYGKVSTWVKC*KETVLESTGICLNA Trigger: CGCATTTAAACATATACCTGTAGATTCCAACACTGTCTCCTTTCAACATTTCACCCAGGTGCTCACTTTTCCATATTTCTTTGTTCTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR CCA 90 bp | GAGATTTCAAGGAAACTGTTAGACTCTTCTCAATATCCTAGCACATaGTGCCCTCTGATGGATTTTCTAAGACAACATAAGACACACAAA | + |
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Preference number: 1 (lower is better) Translates to: EISRKLLDSSQYPST*CPLMDFLRQHKTHK Trigger: TTTGTGTGTCTTATGTTGTCTTAGAAAATCCATCAGAGGGCACCATGTGCTAGGATATTGAGAAGAGTCTAACAGTTTCCTTGAAATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR GCA 90 bp | TCTTTTCTTAAATATCTTCATAGTCTTCTCAGCTGTGTACCGGTCTaGACTTCAAGGGAGCACAGCAACATCGATTTAACAATATTTAAC | + |
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Preference number: 1 (lower is better) Translates to: SFLKYLHSLLSCVPV*TSREHSNIDLTIFN Trigger: GTTAAATATTGTTAAATCGATGTTGCTGTGCTCCCTTGAAGTGCAGACCGGTACACAGCTGAGAAGACTATGAAGATATTTAAGAAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR GCA 90 bp | ATGTTGAAAGGAGACAGTGTTGGAATCTACAGGTATATGTTTAAATaGGAACGTATGCCATACCCAGCATGTGAAAATGATATAATTTAC | + |
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Preference number: 1 (lower is better) Translates to: MLKGDSVGIYRYMFK*ERMPYPACENDIIY Trigger: GTAAATTATATCATTTTCACATGCTGGGTATGGCATACGTTCGCATTTAAACATATACCTGTAGATTCCAACACTGTCTCCTTTCAACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR CAA 90 bp | CCAAGTCGGTGCACAAGGGCAGTGAAGCAAAGGAAGGTGTACCTATaGGCAGAGAGGGGCTACCACGTAGTCTTCCTAGTGACTCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: PSRCTRAVKQRKVYL*AERGYHVVFLVTLL Trigger: TAAAAGAGTCACTAGGAAGACTACGTGGTAGCCCCTCTCTGCCAATAGGTACACCTTCCTTTGCTTCACTGCCCTTGTGCACCGACTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGCAAAAAGTTGCCACAATCTCAGAGCCTGCAAGACTTCACTTTAAGGCAGGCAGGTGGATAGCATaGGAGGTAACAAGTAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: QRQKVATISEPARLHFKAGRWIA*EVTSSN Trigger: ATTGCTACTTGTTACCTCTCATGCTATCCACCTGCC...TGCCTTAAAGTGAAGTCTTGCAGGCTCTGAGATTGTGGCAACTTTTTGCCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR-3UTR GCA 90 bp | TTCTTAAATATCTTCATAGTCTTCTCAGCTGTGTACCGGTCTGCACTTCAAGGGACAGCACCAAGTCGGTaGACAAGGGCAGTGAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: FLNIFIVFSAVYRSALQGTAPSR*TRAVKQ Trigger: TTGCTTCACTGCCCTTGTGCACCGACTTGGTGCTGT...CCCTTGAAGTGCAGACCGGTACACAGCTGAGAAGACTATGAAGATATTTAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR CAA 90 bp | AGCTTCCAAGTAGAACTTGGAGCTCCAGAACTTTATAATTCACCCTaGCTGGTTGTCAAGCAGAACAGTTCCCTCAACCGTAACCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: SFQVELGAPELYNSP*LVVKQNSSLNRNLF Trigger: AAACAGGTTACGGTTGAGGGAACTGTTCTGCTTGACAACCAGCAAGGGTGAATTATAAAGTTCTGGAGCTCCAAGTTCTACTTGGAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR-3UTR TCA 90 bp | TTCTTAAATATCTTCATAGTCTTCTCAGCTGTGTACCGGTCTGCACTTCAAGGGACCTGGGTGAAATGTTaGAAGGAGACAGTGTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: FLNIFIVFSAVYRSALQGTWVKC*KETVLE Trigger: TTCCAACACTGTCTCCTTTCAACATTTCACCCAGGT...CCCTTGAAGTGCAGACCGGTACACAGCTGAGAAGACTATGAAGATATTTAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR-3UTR TCA 90 bp | GAATCCTGGGCTTATTTCCACTATAGGGAATTCTTGCCTTACATCAAAATCAAAAGGTTGTCCCATCTCTaGCTGAATTGTCTGTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: ESWAYFHYREFLPYIKIKRLSHL*LNCLCQ Trigger: TTGGCACAGACAATTCAGTCAGAGATGGGACAACCT...TTTGATTTTGATGTAAGGCAAGAATTCCCTATAGTGGAAATAAGCCCAGGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR-3UTR TCA 90 bp | TTCTTAAATATCTTCATAGTCTTCTCAGCTGTGTACCGGTCTGCACTTCAAGGGGTGACTCTTTTACACTaGTATCTTTCAACCACGGTT | + |
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Preference number: 2 (lower is better) Translates to: FLNIFIVFSAVYRSALQGVTLLH*YLSTTV Trigger: AACCGTGGTTGAAAGATATCAGTGTAAAAGAGTCAC...CCCTTGAAGTGCAGACCGGTACACAGCTGAGAAGACTATGAAGATATTTAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR-3UTR TCA 90 bp | GAATCCTGGGCTTATTTCCACTATAGGGAATTCTTGCCTTACATCAAAATCAAAGGAGGCTTCAATTACTaGAGAGATGATGAGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: ESWAYFHYREFLPYIKIKGGFNY*RDDEPQ Trigger: CTGAGGCTCATCATCTCTTCAGTAATTGAAGCCTCC...TTTGATTTTGATGTAAGGCAAGAATTCCCTATAGTGGAAATAAGCCCAGGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR-3UTR GCA 90 bp | GAATCCTGGGCTTATTTCCACTATAGGGAATTCTTGCCTTACATCAAAATCAAATGTAGGAGGGAGATCTaGATACAGGGAAAACTGGAA | + |
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Preference number: 2 (lower is better) Translates to: ESWAYFHYREFLPYIKIKCRREI*IQGKLE Trigger: TTCCAGTTTTCCCTGTATGCAGATCTCCCTCCTACA...TTTGATTTTGATGTAAGGCAAGAATTCCCTATAGTGGAAATAAGCCCAGGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR-3UTR CCA 90 bp | GAATCCTGGGCTTATTTCCACTATAGGGAATTCTTGCCTTACATCAAAATCAAACAATATCCTAGCACATaGTGCCCTCTGATGGATTTT | + |
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Preference number: 2 (lower is better) Translates to: ESWAYFHYREFLPYIKIKQYPST*CPLMDF Trigger: AAAATCCATCAGAGGGCACCATGTGCTAGGATATTG...TTTGATTTTGATGTAAGGCAAGAATTCCCTATAGTGGAAATAAGCCCAGGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR CAA 90 bp | TCCCATTATTCTGAATCCTGGGCTTATTTCCACTATAGGGAATTCTaGCCTTACATCAAAATCAAAGCACAAAGTGCTTTTTGCTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: SHYSESWAYFHYREF*PYIKIKAQSAFCLY Trigger: GTACAAGCAAAAAGCACTTTGTGCTTTGATTTTGATGTAAGGCAAGAATTCCCTATAGTGGAAATAAGCCCAGGATTCAGAATAATGGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGATATCTTTCAACCACGGTTCCTCCATCTTATTTTCTCTACTAGTGATAATAATCAAGACCATAAATaGATTTGTGAGGCTGCACAT | + |
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Preference number: 2 (lower is better) Translates to: TDIFQPRFLHLIFSTSDNNQDHK*ICEAAH Trigger: ATGTGCAGCCTCACAAATCCATTTATGGTCTTGATT...ATTATCACTAGTAGAGAAAATAAGATGGAGGAACCGTGGTTGAAAGATATCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR-3UTR CCA 90 bp | GAATCCTGGGCTTATTTCCACTATAGGGAATTCTTGCCTTACATCAAAATCAAATCACATTTACAAAGATaGGGAAATAGAAGTTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: ESWAYFHYREFLPYIKIKSHLQR*GNRSSE Trigger: CTCTGAACTTCTATTTCCCCATCTTTGTAAATGTGA...TTTGATTTTGATGTAAGGCAAGAATTCCCTATAGTGGAAATAAGCCCAGGATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR CCA 72 bp | AGTAAGGTACGTGAGTCAACAAATTCCTTCAGGGTATaGCACAGTCAGTTTTCTCGAGTATGGCACAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: SKVRESTNSFRV*HSQFSRVWHSR Trigger: TCTGCTGTGCCATACTCGAGAAAACTGACTGTGCCATACCCTGAAGGAATTTGTTGACTCACGTACCTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR-3UTR CAA 90 bp | TTAGAGCCATTACTCCCTGCTAAAGTAAATCAATTAGATCGCCAAAGGTCCCATTCCAGAGGCAAAAAGTaGCCACAATCTCAGAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: LEPLLPAKVNQLDRQRSHSRGKK*PQSQSL Trigger: CAGGCTCTGAGATTGTGGCAACTTTTTGCCTCTGGA...ATGGGACCTTTGGCGATCTAATTGATTTACTTTAGCAGGGAGTAATGGCTCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR CCA 72 bp | AGCTCTGCTGCCAGACCTACAAATCAAGACCATAAATaGATTTGTGAGGCTGCACATGATATTGAAACACGG | + |
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Preference number: 3 (lower is better) Translates to: SSAARPTNQDHK*ICEAAHDIETR Trigger: CCGTGTTTCAATATCATGTGCAGCCTCACAAATCCATTTATGGTCTTGATTTGTAGGTCTGGCAGCAGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR-3UTR CAA 90 bp | TTAGAGCCATTACTCCCTGCTAAAGTAAATCAATTAGATCGCCAAAGGTCCCATAGGCTGCACATGATATaGAAACACGGTCCTCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: LEPLLPAKVNQLDRQRSHRLHMI*KHGPQH Trigger: ATGCTGAGGACCGTGTTTCAATATCATGTGCAGCCT...ATGGGACCTTTGGCGATCTAATTGATTTACTTTAGCAGGGAGTAATGGCTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR-3UTR CAA 90 bp | TTAGAGCCATTACTCCCTGCTAAAGTAAATCAATTAGATCGCCAAAGGTCCCATCACCTGGGTGAAATGTaGAAAGGAGACAGTGTTGGA | + |
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Preference number: 3 (lower is better) Translates to: LEPLLPAKVNQLDRQRSHHLGEM*KGDSVG Trigger: TCCAACACTGTCTCCTTTCAACATTTCACCCAGGTG...ATGGGACCTTTGGCGATCTAATTGATTTACTTTAGCAGGGAGTAATGGCTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR-3UTR CAA 90 bp | TTAGAGCCATTACTCCCTGCTAAAGTAAATCAATTAGATCGCCAAAGGTCCCATGTGCAAAAATTTGTGTaGATAGGGAGCAGTTTAGGG | + |
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Preference number: 3 (lower is better) Translates to: LEPLLPAKVNQLDRQRSHVQKFV*IGSSLG Trigger: CCCTAAACTGCTCCCTATCAACACAAATTTTTGCAC...ATGGGACCTTTGGCGATCTAATTGATTTACTTTAGCAGGGAGTAATGGCTCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR GCA 72 bp | GGAGACAGTGTTGGAATCTACAGGTATATGTTTAAATaGGAACGTATGCCATACCCAGCATGTGAAAATGAT | + |
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Preference number: 3 (lower is better) Translates to: GDSVGIYRYMFK*ERMPYPACEND Trigger: ATCATTTTCACATGCTGGGTATGGCATACGTTCGCATTTAAACATATACCTGTAGATTCCAACACTGTCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR GCA 72 bp | ATCAAAGAAAGAAGTGAAGCACCAACTGTAAAGAAATaGTGTTTCCAGAGGCAAAAAGTTGCCACAATCTCA | + |
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Preference number: 3 (lower is better) Translates to: IKERSEAPTVKK*CFQRQKVATIS Trigger: TGAGATTGTGGCAACTTTTTGCCTCTGGAAACAGCATTTCTTTACAGTTGGTGCTTCACTTCTTTCTTTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR GCA 72 bp | AAACTGTTAGACTCTTCTCAATATCCTAGCACATGGTaGCCTCTGATGGATTTTCTAAGACAACATAAGACA | + |
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Preference number: 3 (lower is better) Translates to: KLLDSSQYPSTW*PLMDFLRQHKT Trigger: TGTCTTATGTTGTCTTAGAAAATCCATCAGAGGGCACCATGTGCTAGGATATTGAGAAGAGTCTAACAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR GCA 72 bp | TTGCCTTACATCAAAATCAAAGCACAAAGTGCTTTTTaGTTGTACAAACGCTGTTCCTATCACACAAATCGA | + |
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Preference number: 3 (lower is better) Translates to: LPYIKIKAQSAF*LYKRCSYHTNR Trigger: TCGATTTGTGTGATAGGAACAGCGTTTGTACAAGCAAAAAGCACTTTGTGCTTTGATTTTGATGTAAGGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR CCA 72 bp | CAAAATCCAAGTTTAATAGCCCAGAACAAAGAAATATaGAAAAGTGAGCACCTGGGTGAAATGTTGAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: QNPSLIAQNKEI*KSEHLGEMLKG Trigger: TCCTTTCAACATTTCACCCAGGTGCTCACTTTTCCATATTTCTTTGTTCTGGGCTATTAAACTTGGATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR GCA 72 bp | ATCTTATTCAGGAAATCTAGCTTTCATAAATACATCTaGGAAGTAAGTAAGGTACGTGAGTCAACAAATTCC | + |
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Preference number: 3 (lower is better) Translates to: ILFRKSSFHKYI*EVSKVRESTNS Trigger: GGAATTTGTTGACTCACGTACCTTACTTACTTCGCAGATGTATTTATGAAAGCTAGATTTCCTGAATAAGAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR CAA 72 bp | TGCACAAGGGCAGTGAAGCAAAGGAAGGTGTACCTATaGGCAGAGAGGGGCTACCACGTAGTCTTCCTAGTG | + |
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Preference number: 4 (lower is better) Translates to: CTRAVKQRKVYL*AERGYHVVFLV Trigger: CACTAGGAAGACTACGTGGTAGCCCCTCTCTGCCAATAGGTACACCTTCCTTTGCTTCACTGCCCTTGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS-3UTR TCA 90 bp | GTAAGGTACGTGAGTCAACAAATTCCTTCAGGGTATGGCACAGTCAGTTTTCTCCAGCCATCTCCTGACTaGTCCTGTTGGCCCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: VRYVSQQIPSGYGTVSFLQPSPD*SCWPSP Trigger: TGGGGAGGGCCAACAGGATCAGTCAGGAGATGGCTG...GAGAAAACTGACTGTGCCATACCCTGAAGGAATTTGTTGACTCACGTACCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS-3UTR CCA 90 bp | AGTCAACAAATTCCTTCAGGGTATGGCACAGTCAGTTTTCTCGAGTATGGCACAGGATCTTCAAAAACCTaGGGCTCTGGGACAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SQQIPSGYGTVSFLEYGTGSSKT*GSGTAR Trigger: CCTGGCTGTCCCAGAGCCCCAGGTTTTTGAAGATCC...TGTGCCATACTCGAGAAAACTGACTGTGCCATACCCTGAAGGAATTTGTTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS-3UTR GCA 90 bp | GTAAGGTACGTGAGTCAACAAATTCCTTCAGGGTATGGCACAGTCAGTTTTCTCTGGCCCTCCCCATTCTaGACTGGAGATATTGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: VRYVSQQIPSGYGTVSFLWPSPF*TGDIGS Trigger: GGAACCAATATCTCCAGTGCAGAATGGGGAGGGCCA...GAGAAAACTGACTGTGCCATACCCTGAAGGAATTTGTTGACTCACGTACCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS-3UTR TCA 90 bp | AGTCAACAAATTCCTTCAGGGTATGGCACAGTCAGTTTTCTCGAGTATGGCACAGGCACTTTCCATTTGTaGCAGGAAAGGAGACACTCC | + |
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Preference number: 4 (lower is better) Translates to: SQQIPSGYGTVSFLEYGTGTFHL*QERRHS Trigger: GGAGTGTCTCCTTTCCTGTCACAAATGGAAAGTGCC...TGTGCCATACTCGAGAAAACTGACTGTGCCATACCCTGAAGGAATTTGTTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS-3UTR TCA 90 bp | GAAATGCTGTTTCCAGAGGCAAAAAGTTGCCACAATCTCAGAGCCTGCAAGACTCATCAGTGTAAGAGTTaGAACATGGAGGGAGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: EMLFPEAKSCHNLRACKTHQCKS*NMEGAV Trigger: TACTGCTCCCTCCATGTTTCAACTCTTACACTGATG...AGTCTTGCAGGCTCTGAGATTGTGGCAACTTTTTGCCTCTGGAAACAGCATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS-3UTR GCA 90 bp | GAAATGCTGTTTCCAGAGGCAAAAAGTTGCCACAATCTCAGAGCCTGCAAGACTGGCATACCAGGGAGTTaGCAAAGAGAGATATCACTA | + |
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Preference number: 4 (lower is better) Translates to: EMLFPEAKSCHNLRACKTGIPGS*QREISL Trigger: TAGTGATATCTCTCTTTGGCAACTCCCTGGTATGCC...AGTCTTGCAGGCTCTGAGATTGTGGCAACTTTTTGCCTCTGGAAACAGCATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR CAA 72 bp | TTGGAGCTCCAGAACTTTATAATTCACCCTTGCTGGTaGTCAAGCAGAACAGTTCCCTCAACCGTAACCTGT | + |
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Preference number: 4 (lower is better) Translates to: LELQNFIIHPCW*SSRTVPSTVTC Trigger: ACAGGTTACGGTTGAGGGAACTGTTCTGCTTGACAACCAGCAAGGGTGAATTATAAAGTTCTGGAGCTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| 3UTR CAA 72 bp | GTAGAACTTGGAGCTCCAGAACTTTATAATTCACCCTaGCTGGTTGTCAAGCAGAACAGTTCCCTCAACCGT | + |
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Preference number: 4 (lower is better) Translates to: VELGAPELYNSP*LVVKQNSSLNR Trigger: ACGGTTGAGGGAACTGTTCTGCTTGACAACCAGCAAGGGTGAATTATAAAGTTCTGGAGCTCCAAGTTCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS-3UTR TCA 90 bp | GAAATGCTGTTTCCAGAGGCAAAAAGTTGCCACAATCTCAGAGCCTGCAAGACTGATGAGAAGGCCTGTTaGTTTCTTGATTTCCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: EMLFPEAKSCHNLRACKTDEKAC*FLDFLV Trigger: CACAAGGAAATCAAGAAATCAACAGGCCTTCTCATC...AGTCTTGCAGGCTCTGAGATTGTGGCAACTTTTTGCCTCTGGAAACAGCATTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS-3UTR GCA 90 bp | TTCTTAAATATCTTCATAGTCTTCTCAGCTGTGTACCGGTCTGCACTTCAAGGGGCAGGTGCTGCTCATTaGAAACCAGTGAAAGGCATA | + |
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Preference number: 4 (lower is better) Translates to: FLNIFIVFSAVYRSALQGAGAAH*KPVKGI Trigger: TATGCCTTTCACTGGTTTGCAATGAGCAGCACCTGC...CCCTTGAAGTGCAGACCGGTACACAGCTGAGAAGACTATGAAGATATTTAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS-3UTR GCA 90 bp | GTAAGGTACGTGAGTCAACAAATTCCTTCAGGGTATGGCACAGTCAGTTTTCTCGAGTTGACGAGCAGATaGATCACCAATAGCATTTTG | + |
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Preference number: 4 (lower is better) Translates to: VRYVSQQIPSGYGTVSFLELTSR*ITNSIL Trigger: CAAAATGCTATTGGTGATGCATCTGCTCGTCAACTC...GAGAAAACTGACTGTGCCATACCCTGAAGGAATTTGTTGACTCACGTACCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS-3UTR CCA 90 bp | TTCTTAAATATCTTCATAGTCTTCTCAGCTGTGTACCGGTCTGCACTTCAAGGGTCTTCCCATTCTCCTTaGACAGAGACCTGGGAATTA | + |
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Preference number: 4 (lower is better) Translates to: FLNIFIVFSAVYRSALQGSSHSP*TETWEL Trigger: TAATTCCCAGGTCTCTGTCCAAGGAGAATGGGAAGA...CCCTTGAAGTGCAGACCGGTACACAGCTGAGAAGACTATGAAGATATTTAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS-3UTR TCA 90 bp | GAATCCTGGGCTTATTTCCACTATAGGGAATTCTTGCCTTACATCAAAATCAAAGTAAGTATCCCGAGTTaGAGGCCCTGGTTCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: ESWAYFHYREFLPYIKIKVSIPS*RPWFFI Trigger: GATGAAGAACCAGGGCCTTCAACTCGGGATACTTAC...TTTGATTTTGATGTAAGGCAAGAATTCCCTATAGTGGAAATAAGCCCAGGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS-3UTR GCA 90 bp | CAGAGGCAAAAAGTTGCCACAATCTCAGAGCCTGCAAGACTTCACTTTAAGGCATATGATGACAGCGTATaGAAATGTCAGCACAATCTT | + |
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Preference number: 4 (lower is better) Translates to: QRQKVATISEPARLHFKAYDDSV*KCQHNL Trigger: AAGATTGTGCTGACATTTGCATACGCTGTCATCATA...TGCCTTAAAGTGAAGTCTTGCAGGCTCTGAGATTGTGGCAACTTTTTGCCTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS-3UTR GCA 90 bp | TTCAGGAAATCTAGCTTTCATAAATACATCTGCGAAGTAAGTAAGGTACGTGAGCAGAGCAAGGAACACTaGAATACTCCAGATCATGGC | + |
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Preference number: 4 (lower is better) Translates to: FRKSSFHKYICEVSKVREQSKEH*NTPDHG Trigger: GCCATGATCTGGAGTATTGCAGTGTTCCTTGCTCTG...CTCACGTACCTTACTTACTTCGCAGATGTATTTATGAAAGCTAGATTTCCTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS-3UTR CCA 90 bp | TTAGAGCCATTACTCCCTGCTAAAGTAAATCAATTAGATCGCCAAAGGTCCCATCTCATGACTCTCCTGTaGTTTTATTTGCTGAACCTG | + |
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Preference number: 4 (lower is better) Translates to: LEPLLPAKVNQLDRQRSHLMTLL*FYLLNL Trigger: CAGGTTCAGCAAATAAAACCACAGGAGAGTCATGAG...ATGGGACCTTTGGCGATCTAATTGATTTACTTTAGCAGGGAGTAATGGCTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS-3UTR GCA 90 bp | GTAAGGTACGTGAGTCAACAAATTCCTTCAGGGTATGGCACAGTCAGTTTTCTCTGGAAACCAACAAACTaGAAAGACCAATACAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRYVSQQIPSGYGTVSFLWKPTN*KDQYNK Trigger: CTTATTGTATTGGTCTTTGCAGTTTGTTGGTTTCCA...GAGAAAACTGACTGTGCCATACCCTGAAGGAATTTGTTGACTCACGTACCTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR CCA 90 bp | GTAAGGTACGTGAGTCAACAAATTCCTTCAGGGTATGGCACAGTCAGTTTTCTCCACATAGAAGTTAAGTaGAAACCAACAAACTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRYVSQQIPSGYGTVSFLHIEVK*KPTNCK Trigger: TTTGCAGTTTGTTGGTTTCCACTTAACTTCTATGTG...GAGAAAACTGACTGTGCCATACCCTGAAGGAATTTGTTGACTCACGTACCTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR GCA 90 bp | GAATCCTGGGCTTATTTCCACTATAGGGAATTCTTGCCTTACATCAAAATCAAAACTTTGAAACCAGTATaGTGGGTCCAGGAAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ESWAYFHYREFLPYIKIKTLKPV*WVQEKK Trigger: CTTCTTTTCCTGGACCCAGCATACTGGTTTCAAAGT...TTTGATTTTGATGTAAGGCAAGAATTCCCTATAGTGGAAATAAGCCCAGGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| 3UTR CAA 72 bp | AAAGAAATATGGAAAAGTGAGCACCTGGGTGAAATGTaGAAAGGAGACAGTGTTGGAATCTACAGGTATATG | + |
|
Preference number: 4 (lower is better) Translates to: KEIWKSEHLGEM*KGDSVGIYRYM Trigger: CATATACCTGTAGATTCCAACACTGTCTCCTTTCAACATTTCACCCAGGTGCTCACTTTTCCATATTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| 3UTR CAA 72 bp | CTTGCCTTACATCAAAATCAAAGCACAAAGTGCTTTTaGCTTGTACAAACGCTGTTCCTATCACACAAATCG | + |
|
Preference number: 4 (lower is better) Translates to: LALHQNQSTKCF*LVQTLFLSHKS Trigger: CGATTTGTGTGATAGGAACAGCGTTTGTACAAGCAAAAAGCACTTTGTGCTTTGATTTTGATGTAAGGCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR TCA 90 bp | GAATCCTGGGCTTATTTCCACTATAGGGAATTCTTGCCTTACATCAAAATCAAATCACCAATAGCATTTTaGATCCACAACCTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ESWAYFHYREFLPYIKIKSPIAF*IHNLFP Trigger: AGGAAAGAGGTTGTGGATTCAAAATGCTATTGGTGA...TTTGATTTTGATGTAAGGCAAGAATTCCCTATAGTGGAAATAAGCCCAGGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR GCA 90 bp | TTAGAGCCATTACTCCCTGCTAAAGTAAATCAATTAGATCGCCAAAGGTCCCATCACACAAACAGTGATTaGATCCTGAAAGATGATATA | + |
|
Preference number: 4 (lower is better) Translates to: LEPLLPAKVNQLDRQRSHHTNSD*ILKDDI Trigger: TATATCATCTTTCAGGATGCAATCACTGTTTGTGTG...ATGGGACCTTTGGCGATCTAATTGATTTACTTTAGCAGGGAGTAATGGCTCTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| 3UTR CAA 72 bp | TCTGAATCCTGGGCTTATTTCCACTATAGGGAATTCTaGCCTTACATCAAAATCAAAGCACAAAGTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SESWAYFHYREF*PYIKIKAQSAF Trigger: AAAAGCACTTTGTGCTTTGATTTTGATGTAAGGCAAGAATTCCCTATAGTGGAAATAAGCCCAGGATTCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| 3UTR CAA 72 bp | CCTTACATCAAAATCAAAGCACAAAGTGCTTTTTGCTaGTACAAACGCTGTTCCTATCACACAAATCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: PYIKIKAQSAFC*YKRCSYHTNRI Trigger: TATTCGATTTGTGTGATAGGAACAGCGTTTGTACAAGCAAAAAGCACTTTGTGCTTTGATTTTGATGTAAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR GCA 90 bp | ACTGATATCTTTCAACCACGGTTCCTCCATCTTATTTTCTCTACTAGTGATAATTTCTTGATTTCCTTGTaGTTGACAAAAACTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TDIFQPRFLHLIFSTSDNFLISL*LTKTWH Trigger: ATGCCAAGTTTTTGTCAAGCACAAGGAAATCAAGAA...ATTATCACTAGTAGAGAAAATAAGATGGAGGAACCGTGGTTGAAAGATATCAGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS CCA 90 bp | CGGTGCCGGTCCATAGCAACTGCCATCAGTGTAAGAGTTGAAACATaGAGGGAGCAGTACTGGGCAAACCGACTGACATGGCACATGATC | + |
|
Preference number: 5 (lower is better) Translates to: RCRSIATAISVRVET*REQYWANRLTWHMI Trigger: GATCATGTGCCATGTCAGTCGGTTTGCCCAGTACTGCTCCCTCCATGTTTCAACTCTTACACTGATGGCAGTTGCTATGGACCGGCACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS TCA 90 bp | AATTACCCGGTGCCGGTCCATAGCAACTGCCATCAGTGTAAGAGTTaGAACATGGAGGGAGCAGTACTGGGCAAACCGACTGACATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NYPVPVHSNCHQCKS*NMEGAVLGKPTDMA Trigger: TGCCATGTCAGTCGGTTTGCCCAGTACTGCTCCCTCCATGTTTCAACTCTTACACTGATGGCAGTTGCTATGGACCGGCACCGGGTAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS CCA 90 bp | GCAACTGCCATCAGTGTAAGAGTTGAAACATGGAGGGAGCAGTACTaGGCAAACCGACTGACATGGCACATGATCCTACCGAAAACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ATAISVRVETWREQY*ANRLTWHMILPKTH Trigger: GTGGGTTTTCGGTAGGATCATGTGCCATGTCAGTCGGTTTGCCCAGTACTGCTCCCTCCATGTTTCAACTCTTACACTGATGGCAGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS CCA 90 bp | AGAGTTGAAACATGGAGGGAGCAGTACTGGGCAAACCGACTGACATaGCACATGATCCTACCGAAAACCCACTGTCCACTCAGAAAACGA | + |
|
Preference number: 5 (lower is better) Translates to: RVETWREQYWANRLT*HMILPKTHCPLRKR Trigger: TCGTTTTCTGAGTGGACAGTGGGTTTTCGGTAGGATCATGTGCCATGTCAGTCGGTTTGCCCAGTACTGCTCCCTCCATGTTTCAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR CAA 90 bp | GAAATGCTGTTTCCAGAGGCAAAAAGTTGCCACAATCTCAGAGCCTGCAAGACTTTAGCCTTGGTTTCATaGGGTGCAGAATTACCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: EMLFPEAKSCHNLRACKTLALVS*GAELPG Trigger: ACCGGGTAATTCTGCACCCAATGAAACCAAGGCTAA...AGTCTTGCAGGCTCTGAGATTGTGGCAACTTTTTGCCTCTGGAAACAGCATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR CAA 90 bp | TTCTTAAATATCTTCATAGTCTTCTCAGCTGTGTACCGGTCTGCACTTCAAGGGGTAGTGTGCCATGAGTaGACGAGCAGATGCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: FLNIFIVFSAVYRSALQGVVCHE*TSRCIT Trigger: GGTGATGCATCTGCTCGTCAACTCATGGCACACTAC...CCCTTGAAGTGCAGACCGGTACACAGCTGAGAAGACTATGAAGATATTTAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR CAA 90 bp | AGTCAACAAATTCCTTCAGGGTATGGCACAGTCAGTTTTCTCGAGTATGGCACAAGCAGGTGCTGCTCATaGCAAACCAGTGAAAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SQQIPSGYGTVSFLEYGTSRCCS*QTSERH Trigger: ATGCCTTTCACTGGTTTGCAATGAGCAGCACCTGCT...TGTGCCATACTCGAGAAAACTGACTGTGCCATACCCTGAAGGAATTTGTTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR CAA 90 bp | GAAATGCTGTTTCCAGAGGCAAAAAGTTGCCACAATCTCAGAGCCTGCAAGACTGTATCACCATCCATGTaGACGAGAGTGAACAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: EMLFPEAKSCHNLRACKTVSPSM*TRVNRF Trigger: AAATCTGTTCACTCTCGTCAACATGGATGGTGATAC...AGTCTTGCAGGCTCTGAGATTGTGGCAACTTTTTGCCTCTGGAAACAGCATTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS GCA 90 bp | GCCAGATTGAAGATGAGAAGGCCTGTTGATTTCTTGATTTCCTTGTaGTTGACAAAAACTTGGCATACCAGGGAGTTGCCAAAGAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ARLKMRRPVDFLISL*LTKTWHTRELPKRD Trigger: ATCTCTCTTTGGCAACTCCCTGGTATGCCAAGTTTTTGTCAAGCACAAGGAAATCAAGAAATCAACAGGCCTTCTCATCTTCAATCTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR CAA 90 bp | TTCTTAAATATCTTCATAGTCTTCTCAGCTGTGTACCGGTCTGCACTTCAAGGGTGGTTCCATTCTGGGTaGTGTGATTGCAGCTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLNIFIVFSAVYRSALQGWFHSG*CDCSFD Trigger: ATCAAAGCTGCAATCACACAACCCAGAATGGAACCA...CCCTTGAAGTGCAGACCGGTACACAGCTGAGAAGACTATGAAGATATTTAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR CAA 90 bp | TTAGAGCCATTACTCCCTGCTAAAGTAAATCAATTAGATCGCCAAAGGTCCCATGCACGGAAGCTCCTGTaGAGCCAACAGTATATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LEPLLPAKVNQLDRQRSHARKLL*SQQYMK Trigger: TTTCATATACTGTTGGCTCAACAGGAGCTTCCGTGC...ATGGGACCTTTGGCGATCTAATTGATTTACTTTAGCAGGGAGTAATGGCTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR CAA 90 bp | TTCTTAAATATCTTCATAGTCTTCTCAGCTGTGTACCGGTCTGCACTTCAAGGGCTCCTGTGGTTTTATTaGCTGAACCTGGGAGTTACT | + |
|
Preference number: 5 (lower is better) Translates to: FLNIFIVFSAVYRSALQGLLWFY*LNLGVT Trigger: AGTAACTCCCAGGTTCAGCAAATAAAACCACAGGAG...CCCTTGAAGTGCAGACCGGTACACAGCTGAGAAGACTATGAAGATATTTAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS GCA 90 bp | GTTGAGCCAACAGTATATGAAAGGATTGTAGCAGGTGCTGCTCATTaGAAACCAGTGAAAGGCATAGAAAAGCACACTGTCATTTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: VEPTVYERIVAGAAH*KPVKGIEKHTVIFY Trigger: GTAGAAAATGACAGTGTGCTTTTCTATGCCTTTCACTGGTTTGCAATGAGCAGCACCTGCTACAATCCTTTCATATACTGTTGGCTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR CAA 90 bp | TTCTTAAATATCTTCATAGTCTTCTCAGCTGTGTACCGGTCTGCACTTCAAGGGAGGCCTGTTGATTTCTaGATTTCCTTGTGCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: FLNIFIVFSAVYRSALQGRPVDF*ISLCLT Trigger: TGTCAAGCACAAGGAAATCAAGAAATCAACAGGCCT...CCCTTGAAGTGCAGACCGGTACACAGCTGAGAAGACTATGAAGATATTTAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR CAA 90 bp | GTAAGGTACGTGAGTCAACAAATTCCTTCAGGGTATGGCACAGTCAGTTTTCTCAGAGCAAATGGACTGTaGAGCAGGATTATCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: VRYVSQQIPSGYGTVSFLRANGL*SRIIKM Trigger: CATTTTGATAATCCTGCTCAACAGTCCATTTGCTCT...GAGAAAACTGACTGTGCCATACCCTGAAGGAATTTGTTGACTCACGTACCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR CAA 90 bp | GTAAGGTACGTGAGTCAACAAATTCCTTCAGGGTATGGCACAGTCAGTTTTCTCGATTTCTTGATTTCCTaGTGCTTGACAAAAACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VRYVSQQIPSGYGTVSFLDFLIS*CLTKTW Trigger: CCAAGTTTTTGTCAAGCACAAGGAAATCAAGAAATC...GAGAAAACTGACTGTGCCATACCCTGAAGGAATTTGTTGACTCACGTACCTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR CAA 90 bp | GAATCCTGGGCTTATTTCCACTATAGGGAATTCTTGCCTTACATCAAAATCAAAATCTTCCCATTCTCCTaGGACAGAGACCTGGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: ESWAYFHYREFLPYIKIKIFPFS*DRDLGI Trigger: AATTCCCAGGTCTCTGTCCAAGGAGAATGGGAAGAT...TTTGATTTTGATGTAAGGCAAGAATTCCCTATAGTGGAAATAAGCCCAGGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR CAA 90 bp | GAATCCTGGGCTTATTTCCACTATAGGGAATTCTTGCCTTACATCAAAATCAAATCAGATATTGCCAGATaGAAGATGAGAAGGCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ESWAYFHYREFLPYIKIKSDIAR*KMRRPV Trigger: AACAGGCCTTCTCATCTTCAATCTGGCAATATCTGA...TTTGATTTTGATGTAAGGCAAGAATTCCCTATAGTGGAAATAAGCCCAGGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS TCA 90 bp | TATCAAAATGTCAGATATTGCCAGATTGAAGATGAGAAGGCCTGTTaGTTTCTTGATTTCCTTGTGCTTGACAAAAACTTGGCATACCAG | + |
|
Preference number: 5 (lower is better) Translates to: YQNVRYCQIEDEKAC*FLDFLVLDKNLAYQ Trigger: CTGGTATGCCAAGTTTTTGTCAAGCACAAGGAAATCAAGAAATCAACAGGCCTTCTCATCTTCAATCTGGCAATATCTGACATTTTGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS-3UTR CAA 90 bp | TTCAGGAAATCTAGCTTTCATAAATACATCTGCGAAGTAAGTAAGGTACGTGAGATCACCAATAGCATTTaGAATCCACAACCTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FRKSSFHKYICEVSKVREITNSI*NPQPLS Trigger: GGAAAGAGGTTGTGGATTCAAAATGCTATTGGTGAT...CTCACGTACCTTACTTACTTCGCAGATGTATTTATGAAAGCTAGATTTCCTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS GCA 90 bp | ACTGGAAATAAGAACCACATAGAAGTTAAGTGGAAACCAACAAACTaGAAAGACCAATACAATAAGTATCAACATCCGGATGCTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TGNKNHIEVKWKPTN*KDQYNKYQHPDALL Trigger: AAGAAGAGCATCCGGATGTTGATACTTATTGTATTGGTCTTTGCAGTTTGTTGGTTTCCACTTAACTTCTATGTGGTTCTTATTTCCAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS CCA 72 bp | ACATGGAGGGAGCAGTACTGGGCAAACCGACTGACATaGCACATGATCCTACCGAAAACCCACTGTCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: TWREQYWANRLT*HMILPKTHCPL Trigger: GAGTGGACAGTGGGTTTTCGGTAGGATCATGTGCCATGTCAGTCGGTTTGCCCAGTACTGCTCCCTCCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS CCA 72 bp | ATGTCCCGAGGTCCACATACTTTGAAACCAGTATGCTaGGTCCAGGAAAAGAAGGGAGGCAGTAGCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: MSRGPHTLKPVC*VQEKKGGSSSW Trigger: CCAGGAGCTACTGCCTCCCTTCTTTTCCTGGACCCAGCATACTGGTTTCAAAGTATGTGGACCTCGGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS CAA 72 bp | TGGCAACAACAAATAGGCATTGGGAGTGGGTTAGCCTaGGTTTCATTGGGTGCAGAATTACCCGGTGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: WQQQIGIGSGLA*VSLGAELPGAG Trigger: ACCGGCACCGGGTAATTCTGCACCCAATGAAACCAAGGCTAACCCACTCCCAATGCCTATTTGTTGTTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS GCA 72 bp | GTTAGCCTTGGTTTCATTGGGTGCAGAATTACCCGGTaGCGGTCCATAGCAACTGCCATCAGTGTAAGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: VSLGFIGCRITR*RSIATAISVRV Trigger: AACTCTTACACTGATGGCAGTTGCTATGGACCGGCACCGGGTAATTCTGCACCCAATGAAACCAAGGCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS CCA 72 bp | ATCAGTGTAAGAGTTGAAACATGGAGGGAGCAGTACTaGGCAAACCGACTGACATGGCACATGATCCTACCG | + |
|
Preference number: 6 (lower is better) Translates to: ISVRVETWREQY*ANRLTWHMILP Trigger: CGGTAGGATCATGTGCCATGTCAGTCGGTTTGCCCAGTACTGCTCCCTCCATGTTTCAACTCTTACACTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS CCA 72 bp | TCCATAGCAACTGCCATCAGTGTAAGAGTTGAAACATaGAGGGAGCAGTACTGGGCAAACCGACTGACATGG | + |
|
Preference number: 6 (lower is better) Translates to: SIATAISVRVET*REQYWANRLTW Trigger: CCATGTCAGTCGGTTTGCCCAGTACTGCTCCCTCCATGTTTCAACTCTTACACTGATGGCAGTTGCTATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS CCA 72 bp | TATCCCGAGTTGAAGGCCCTGGTTCTTCATCTAGAGTaGGATCTGGATCTTCCCATTCTCCTTGGACAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: YPELKALVLHLE*DLDLPILLGQR Trigger: TCTCTGTCCAAGGAGAATGGGAAGATCCAGATCCCACTCTAGATGAAGAACCAGGGCCTTCAACTCGGGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS CCA 72 bp | TCATCTAGAGTGGGATCTGGATCTTCCCATTCTCCTTaGACAGAGACCTGGGAATTATCCCCTGTAGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SSRVGSGSSHSP*TETWELSPVAK Trigger: TTTGGCTACAGGGGATAATTCCCAGGTCTCTGTCCAAGGAGAATGGGAAGATCCAGATCCCACTCTAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS CAA 90 bp | CAACATCCGGATGCTCTTCTTGCGCTTCTGGTAGTGTGCCATGAGTaGACGAGCAGATGCATCACCAATAGCATTTTGAATCCACAACCT | + |
|
Preference number: 6 (lower is better) Translates to: QHPDALLALLVVCHE*TSRCITNSILNPQP Trigger: AGGTTGTGGATTCAAAATGCTATTGGTGATGCATCTGCTCGTCAACTCATGGCACACTACCAGAAGCGCAAGAAGAGCATCCGGATGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS CCA 72 bp | CTCCAGATCATGGCAACAACAAATAGGCATTGGGAGTaGGTTAGCCTTGGTTTCATTGGGTGCAGAATTACC | + |
|
Preference number: 6 (lower is better) Translates to: LQIMATTNRHWE*VSLGFIGCRIT Trigger: GGTAATTCTGCACCCAATGAAACCAAGGCTAACCCACTCCCAATGCCTATTTGTTGTTGCCATGATCTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS CCA 72 bp | GCAATACTCCAGATCATGGCAACAACAAATAGGCATTaGGAGTGGGTTAGCCTTGGTTTCATTGGGTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AILQIMATTNRH*EWVSLGFIGCR Trigger: TCTGCACCCAATGAAACCAAGGCTAACCCACTCCCAATGCCTATTTGTTGTTGCCATGATCTGGAGTATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS CCA 72 bp | AGATGTCTGGAGCTCCCTAAGCTCATGACTCTCCTGTaGTTTTATTTGCTGAACCTGGGAGTTACTACACAC | + |
|
Preference number: 6 (lower is better) Translates to: RCLELPKLMTLL*FYLLNLGVTTH Trigger: GTGTGTAGTAACTCCCAGGTTCAGCAAATAAAACCACAGGAGAGTCATGAGCTTAGGGAGCTCCAGACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS CAA 72 bp | GATGCTCTTCTTGCGCTTCTGGTAGTGTGCCATGAGTaGACGAGCAGATGCATCACCAATAGCATTTTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: DALLALLVVCHE*TSRCITNSILN Trigger: ATTCAAAATGCTATTGGTGATGCATCTGCTCGTCAACTCATGGCACACTACCAGAAGCGCAAGAAGAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS TCA 72 bp | ATTTTCTCCGAGCCAATCAATGGCACTTTCCATTTGTaGCAGGAAAGGAGACACTCCCTTGAAGGAAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: IFSEPINGTFHL*QERRHSLEGSV Trigger: AACACTTCCTTCAAGGGAGTGTCTCCTTTCCTGTCACAAATGGAAAGTGCCATTGATTGGCTCGGAGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS GCA 72 bp | GTTGCCAAAGAGAGATATCACTATGATGACAGCGTATaGAAATGTCAGCACAATCTTTGCCATGATGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VAKERYHYDDSV*KCQHNLCHDVG Trigger: CCCCACATCATGGCAAAGATTGTGCTGACATTTGCATACGCTGTCATCATAGTGATATCTCTCTTTGGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS CAA 72 bp | CCCATTCTGCACTGGAGATATTGGTTCCATTCTGGGTaGTGTGATTGCAGCTTTGATCCTCTATTGATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PILHWRYWFHSG*CDCSFDPLLME Trigger: TTCCATCAATAGAGGATCAAAGCTGCAATCACACAACCCAGAATGGAACCAATATCTCCAGTGCAGAATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS TCA 72 bp | GTCCACTCAGAAAACGAGCCAGAGCAAATGGACTGTTaGGCAGGATTATCAAAATGTCAGATATTGCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: VHSENEPEQMDC*AGLSKCQILPD Trigger: ATCTGGCAATATCTGACATTTTGATAATCCTGCTCAACAGTCCATTTGCTCTGGCTCGTTTTCTGAGTGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
||
| CDS GCA 72 bp | AAGATGAGAAGGCCTGTTGATTTCTTGATTTCCTTGTaGTTGACAAAAACTTGGCATACCAGGGAGTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: KMRRPVDFLISL*LTKTWHTRELP Trigger: TGGCAACTCCCTGGTATGCCAAGTTTTTGTCAAGCACAAGGAAATCAAGAAATCAACAGGCCTTCTCATCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS GCA 72 bp | ACAGTATATGAAAGGATTGTAGCAGGTGCTGCTCATTaGAAACCAGTGAAAGGCATAGAAAAGCACACTGTC | + |
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Preference number: 6 (lower is better) Translates to: TVYERIVAGAAH*KPVKGIEKHTV Trigger: GACAGTGTGCTTTTCTATGCCTTTCACTGGTTTGCAATGAGCAGCACCTGCTACAATCCTTTCATATACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS CAA 72 bp | TGTCCACTCAGAAAACGAGCCAGAGCAAATGGACTGTaGAGCAGGATTATCAAAATGTCAGATATTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: CPLRKRARANGL*SRIIKMSDIAR Trigger: TCTGGCAATATCTGACATTTTGATAATCCTGCTCAACAGTCCATTTGCTCTGGCTCGTTTTCTGAGTGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS CAA 90 bp | ATTGCCAGATTGAAGATGAGAAGGCCTGTTGATTTCTTGATTTCCTaGTGCTTGACAAAAACTTGGCATACCAGGGAGTTGCCAAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: IARLKMRRPVDFLIS*CLTKTWHTRELPKR Trigger: TCTCTTTGGCAACTCCCTGGTATGCCAAGTTTTTGTCAAGCACAAGGAAATCAAGAAATCAACAGGCCTTCTCATCTTCAATCTGGCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS CAA 72 bp | TTGAAGATGAGAAGGCCTGTTGATTTCTTGATTTCCTaGTGCTTGACAAAAACTTGGCATACCAGGGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LKMRRPVDFLIS*CLTKTWHTREL Trigger: CAACTCCCTGGTATGCCAAGTTTTTGTCAAGCACAAGGAAATCAAGAAATCAACAGGCCTTCTCATCTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS CAA 90 bp | ATGTCAGATATTGCCAGATTGAAGATGAGAAGGCCTGTTGATTTCTaGATTTCCTTGTGCTTGACAAAAACTTGGCATACCAGGGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: MSDIARLKMRRPVDF*ISLCLTKTWHTREL Trigger: CAACTCCCTGGTATGCCAAGTTTTTGTCAAGCACAAGGAAATCAAGAAATCAACAGGCCTTCTCATCTTCAATCTGGCAATATCTGACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS CCA 72 bp | GTTGATTTCTTGATTTCCTTGTGCTTGACAAAAACTTaGCATACCAGGGAGTTGCCAAAGAGAGATATCACT | + |
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Preference number: 6 (lower is better) Translates to: VDFLISLCLTKT*HTRELPKRDIT Trigger: AGTGATATCTCTCTTTGGCAACTCCCTGGTATGCCAAGTTTTTGTCAAGCACAAGGAAATCAAGAAATCAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS CAA 72 bp | ATTGCCAGATTGAAGATGAGAAGGCCTGTTGATTTCTaGATTTCCTTGTGCTTGACAAAAACTTGGCATACC | + |
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Preference number: 6 (lower is better) Translates to: IARLKMRRPVDF*ISLCLTKTWHT Trigger: GGTATGCCAAGTTTTTGTCAAGCACAAGGAAATCAAGAAATCAACAGGCCTTCTCATCTTCAATCTGGCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS TCA 72 bp | GTCAGATATTGCCAGATTGAAGATGAGAAGGCCTGTTaGTTTCTTGATTTCCTTGTGCTTGACAAAAACTTG | + |
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Preference number: 6 (lower is better) Translates to: VRYCQIEDEKAC*FLDFLVLDKNL Trigger: CAAGTTTTTGTCAAGCACAAGGAAATCAAGAAATCAACAGGCCTTCTCATCTTCAATCTGGCAATATCTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS GCA 72 bp | AAAGGCATAGAAAAGCACACTGTCATTTTCTACACCTaGACTGGAAATAAGAACCACATAGAAGTTAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: KGIEKHTVIFYT*TGNKNHIEVKW Trigger: CCACTTAACTTCTATGTGGTTCTTATTTCCAGTGCAGGTGTAGAAAATGACAGTGTGCTTTTCTATGCCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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| CDS CAA 72 bp | TTGAGCAGGATTATCAAAATGTCAGATATTGCCAGATaGAAGATGAGAAGGCCTGTTGATTTCTTGATTTCC | + |
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Preference number: 6 (lower is better) Translates to: LSRIIKMSDIAR*KMRRPVDFLIS Trigger: GGAAATCAAGAAATCAACAGGCCTTCTCATCTTCAATCTGGCAATATCTGACATTTTGATAATCCTGCTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033556.4 |
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