RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PGPEP1L (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030553

Ensembl transcript IDs: ENSMUST00000032770.4, ENSMUST00000207874.2

Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TTCAGTTCATTTGGTCTTGACACTAGGTTTTGGTGGCTCTTTGGAGTTACAAAGAAGATTGTGATTCTGTaGGTCCACACCCCCACCCCC +
Preference number: 2 (lower is better)
Translates to: FSSFGLDTRFWWLFGVTKKIVIL*VHTPTP
Trigger: GGGGGTGGGGGTGTGGACTCACAGAATCACAATCTT...CTTTGTAACTCCAAAGAGCCACCAAAACCTAGTGTCAAGACCAAATGAACTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032770.4
3UTR-3UTR TCA 90 bp TTCAGTTCATTTGGTCTTGACACTAGGTTTTGGTGGCTCTTTGGAGTTACAAAGACTAAAGTAAGATTGTaGTTCTGTGAGTCCACACCC +
Preference number: 2 (lower is better)
Translates to: FSSFGLDTRFWWLFGVTKTKVRL*FCESTP
Trigger: GGGTGTGGACTCACAGAATCACAATCTTACTTTAGT...CTTTGTAACTCCAAAGAGCCACCAAAACCTAGTGTCAAGACCAAATGAACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032770.4
3UTR TCA 72 bp GCCTCTCATAGCACAGCTGGCTTCTCCGTCCAAGCCTaGAACACTCCATTTCATCTAAGGAAGGCATCCCCC +
Preference number: 3 (lower is better)
Translates to: ASHSTAGFSVQA*NTPFHLRKASP
Trigger: GGGGGATGCCTTCCTTAGATGAAATGGAGTGTTTCAGGCTTGGACGGAGAAGCCAGCTGTGCTATGAGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032770.4
3UTR CCA 72 bp TTATTCAGTTCATTTGGTCTTGACACTAGGTTTTGGTaGCTCTTTGGAGTTACAAAGGTCATAACTTCCCCT +
Preference number: 3 (lower is better)
Translates to: LFSSFGLDTRFW*LFGVTKVITSP
Trigger: AGGGGAAGTTATGACCTTTGTAACTCCAAAGAGCCACCAAAACCTAGTGTCAAGACCAAATGAACTGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032770.4
3UTR CCA 72 bp GAGTTATTCAGTTCATTTGGTCTTGACACTAGGTTTTaGTGGCTCTTTGGAGTTACAAAGGTCATAACTTCC +
Preference number: 3 (lower is better)
Translates to: ELFSSFGLDTRF*WLFGVTKVITS
Trigger: GGAAGTTATGACCTTTGTAACTCCAAAGAGCCACCAAAACCTAGTGTCAAGACCAAATGAACTGAATAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032770.4
CDS-3UTR CCA 90 bp TTAGAGCCTCTCATAGCACAGCTGGCTTCTCCGTCCAAGCCTGAAACACTCCATGACAGAGGAGGGACATaGATGAGAGCCGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: LEPLIAQLASPSKPETLHDRGGT*MRAACP
Trigger: TGGGCATGCGGCTCTCATCCATGTCCCTCCTCTGTC...ATGGAGTGTTTCAGGCTTGGACGGAGAAGCCAGCTGTGCTATGAGAGGCTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032770.4
CDS-3UTR GCA 90 bp TTCAGTTCATTTGGTCTTGACACTAGGTTTTGGTGGCTCTTTGGAGTTACAAAGCTGGCCGAGAGCCAGTaGGACAGAGGAGGGACATGG +
Preference number: 4 (lower is better)
Translates to: FSSFGLDTRFWWLFGVTKLAESQ*DRGGTW
Trigger: CCATGTCCCTCCTCTGTCGCACTGGCTCTCGGCCAG...CTTTGTAACTCCAAAGAGCCACCAAAACCTAGTGTCAAGACCAAATGAACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032770.4
CDS-3UTR CCA 90 bp GAGAGTTATTCAGTTCATTTGGTCTTGACACTAGGTTTTGGTGGCTCTTTGGAGACTCCATCCTCCGGCTaGAAGCCTCTTACATCTGAA +
Preference number: 4 (lower is better)
Translates to: ESYSVHLVLTLGFGGSLETPSSG*KPLTSE
Trigger: TTCAGATGTAAGAGGCTTCCAGCCGGAGGATGGAGT...CTCCAAAGAGCCACCAAAACCTAGTGTCAAGACCAAATGAACTGAATAACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032770.4
CDS-3UTR TCA 90 bp GAGAGTTATTCAGTTCATTTGGTCTTGACACTAGGTTTTGGTGGCTCTTTGGAGAGACCTCCTTCATGTTaGCAACAGACAGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: ESYSVHLVLTLGFGGSLERPPSC*QQTASL
Trigger: AAGTGAGGCTGTCTGTTGTCAACATGAAGGAGGTCT...CTCCAAAGAGCCACCAAAACCTAGTGTCAAGACCAAATGAACTGAATAACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032770.4
CDS-3UTR CCA 90 bp GAGAGTTATTCAGTTCATTTGGTCTTGACACTAGGTTTTGGTGGCTCTTTGGAGACTGTTCCAGAAAGATaGCCTTGGCAGAAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: ESYSVHLVLTLGFGGSLETVPER*PWQKSP
Trigger: TGGACTCTTCTGCCAAGGCCATCTTTCTGGAACAGT...CTCCAAAGAGCCACCAAAACCTAGTGTCAAGACCAAATGAACTGAATAACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032770.4
CDS-3UTR CCA 90 bp GAGAGTTATTCAGTTCATTTGGTCTTGACACTAGGTTTTGGTGGCTCTTTGGAGTCTTCCAGCATTTCTTaGATGATGACTCGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: ESYSVHLVLTLGFGGSLESSSIS*MMTRKA
Trigger: AGCCTTGCGAGTCATCATCCAAGAAATGCTGGAAGA...CTCCAAAGAGCCACCAAAACCTAGTGTCAAGACCAAATGAACTGAATAACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032770.4
CDS GCA 90 bp ATGATGACTCGCAAGGCTTTGCCCAGAAGGCTGGCCGAGAGCCAGTaGGACAGAGGAGGGACATGGATGAGAGCCGCATGCCCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: MMTRKALPRRLAESQ*DRGGTWMRAACPVP
Trigger: TGGGACTGGGCATGCGGCTCTCATCCATGTCCCTCCTCTGTCGCACTGGCTCTCGGCCAGCCTTCTGGGCAAAGCCTTGCGAGTCATCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032770.4
ENSMUST00000207874.2
CDS GCA 90 bp TTAGAAAGTTCCTTCACGGCTTCCCAGCTGGAATTCACTAGGTGCTaGCGGAAGGGCCCAAAACCGGTCACCACCACGCAGCGGGACTGC +
Preference number: 5 (lower is better)
Translates to: LESSFTASQLEFTRC*RKGPKPVTTTQRDC
Trigger: GCAGTCCCGCTGCGTGGTGGTGACCGGTTTTGGGCCCTTCCGGCAGCACCTAGTGAATTCCAGCTGGGAAGCCGTGAAGGAACTTTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207874.2
CDS GCA 90 bp AGCTTAGAAAGTTCCTTCACGGCTTCCCAGCTGGAATTCACTAGGTaGTGCCGGAAGGGCCCAAAACCGGTCACCACCACGCAGCGGGAC +
Preference number: 5 (lower is better)
Translates to: SLESSFTASQLEFTR*CRKGPKPVTTTQRD
Trigger: GTCCCGCTGCGTGGTGGTGACCGGTTTTGGGCCCTTCCGGCAGCACCTAGTGAATTCCAGCTGGGAAGCCGTGAAGGAACTTTCTAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207874.2
CDS TCA 90 bp ACCGGGGAGGCACACTCCATCCTCCGGCTGGAAGCCTCTTACATCTaGATCCCGATAGCCTCGGTTCTTACCACACTGTTCCAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: TGEAHSILRLEASYI*IPIASVLTTLFQKD
Trigger: ATCTTTCTGGAACAGTGTGGTAAGAACCGAGGCTATCGGGATTCAGATGTAAGAGGCTTCCAGCCGGAGGATGGAGTGTGCCTCCCCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032770.4
ENSMUST00000207874.2
CDS CCA 90 bp CCCGATAGCCTCGGTTCTTACCACACTGTTCCAGAAAGATGGCCTTaGCAGAAGAGTCCATGCCCACATGCACAACAAGTTGTGGTTGAA +
Preference number: 5 (lower is better)
Translates to: PDSLGSYHTVPERWP*QKSPCPHAQQVVVE
Trigger: TTCAACCACAACTTGTTGTGCATGTGGGCATGGACTCTTCTGCCAAGGCCATCTTTCTGGAACAGTGTGGTAAGAACCGAGGCTATCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207874.2
CDS CCA 90 bp CTGAATCCCGATAGCCTCGGTTCTTACCACACTGTTCCAGAAAGATaGCCTTGGCAGAAGAGTCCATGCCCACATGCACAACAAGTTGTG +
Preference number: 5 (lower is better)
Translates to: LNPDSLGSYHTVPER*PWQKSPCPHAQQVV
Trigger: CACAACTTGTTGTGCATGTGGGCATGGACTCTTCTGCCAAGGCCATCTTTCTGGAACAGTGTGGTAAGAACCGAGGCTATCGGGATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207874.2
CDS-3UTR CAA 90 bp AGAACACTTGAGAGTTATTCAGTTCATTTGGTCTTGACACTAGGTTTTGGTGGCATGACTCGCAAGGCTTaGCCCAGAAGGCTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: RTLESYSVHLVLTLGFGGMTRKA*PRRLAE
Trigger: CTCGGCCAGCCTTCTGGGCAAAGCCTTGCGAGTCAT...GCCACCAAAACCTAGTGTCAAGACCAAATGAACTGAATAACTCTCAAGTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032770.4
CDS GCA 90 bp TCTTACCACACTGTTCCAGAAAGATGGCCTTGGCAGAAGAGTCCATaGCCACATGCACAACAAGTTGTGGTTGAAAATCTTCCCAGATTG +
Preference number: 5 (lower is better)
Translates to: SYHTVPERWPWQKSP*PHAQQVVVENLPRL
Trigger: CAATCTGGGAAGATTTTCAACCACAACTTGTTGTGCATGTGGGCATGGACTCTTCTGCCAAGGCCATCTTTCTGGAACAGTGTGGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207874.2
CDS-3UTR CAA 90 bp AGAACACTTGAGAGTTATTCAGTTCATTTGGTCTTGACACTAGGTTTTGGTGGCTTCTTCCAGCATTTCTaGGATGATGACTCGCAAGGC +
Preference number: 5 (lower is better)
Translates to: RTLESYSVHLVLTLGFGGFFQHF*DDDSQG
Trigger: GCCTTGCGAGTCATCATCCAAGAAATGCTGGAAGAA...GCCACCAAAACCTAGTGTCAAGACCAAATGAACTGAATAACTCTCAAGTGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032770.4
CDS GCA 72 bp CGCAAGGCTTTGCCCAGAAGGCTGGCCGAGAGCCAGTaGGACAGAGGAGGGACATGGATGAGAGCCGCATGC +
Preference number: 6 (lower is better)
Translates to: RKALPRRLAESQ*DRGGTWMRAAC
Trigger: GCATGCGGCTCTCATCCATGTCCCTCCTCTGTCGCACTGGCTCTCGGCCAGCCTTCTGGGCAAAGCCTTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032770.4
ENSMUST00000207874.2
CDS CCA 72 bp AGGCTGGCCGAGAGCCAGTGCGACAGAGGAGGGACATaGATGAGAGCCGCATGCCCAGTCCCAAGGTGCAGA +
Preference number: 6 (lower is better)
Translates to: RLAESQCDRGGT*MRAACPVPRCR
Trigger: TCTGCACCTTGGGACTGGGCATGCGGCTCTCATCCATGTCCCTCCTCTGTCGCACTGGCTCTCGGCCAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032770.4
ENSMUST00000207874.2
CDS TCA 72 bp TGGCCGAGAGCCAGTGCGACAGAGGAGGGACATGGATaGGAGCCGCATGCCCAGTCCCAAGGTGCAGAGACA +
Preference number: 6 (lower is better)
Translates to: WPRASATEEGHG*EPHAQSQGAET
Trigger: TGTCTCTGCACCTTGGGACTGGGCATGCGGCTCTCATCCATGTCCCTCCTCTGTCGCACTGGCTCTCGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032770.4
ENSMUST00000207874.2
CDS GCA 72 bp TCCTTCACGGCTTCCCAGCTGGAATTCACTAGGTGCTaGCGGAAGGGCCCAAAACCGGTCACCACCACGCAG +
Preference number: 6 (lower is better)
Translates to: SFTASQLEFTRC*RKGPKPVTTTQ
Trigger: CTGCGTGGTGGTGACCGGTTTTGGGCCCTTCCGGCAGCACCTAGTGAATTCCAGCTGGGAAGCCGTGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207874.2
CDS GCA 72 bp AGTTCCTTCACGGCTTCCCAGCTGGAATTCACTAGGTaGTGCCGGAAGGGCCCAAAACCGGTCACCACCACG +
Preference number: 6 (lower is better)
Translates to: SSFTASQLEFTR*CRKGPKPVTTT
Trigger: CGTGGTGGTGACCGGTTTTGGGCCCTTCCGGCAGCACCTAGTGAATTCCAGCTGGGAAGCCGTGAAGGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207874.2
CDS CAA 90 bp TTCCCGATTTCTTCCAGCATTTCTTGGATGATGACTCGCAAGGCTTaGCCCAGAAGGCTGGCCGAGAGCCAGTGCGACAGAGGAGGGACA +
Preference number: 6 (lower is better)
Translates to: FPISSSISWMMTRKA*PRRLAESQCDRGGT
Trigger: TGTCCCTCCTCTGTCGCACTGGCTCTCGGCCAGCCTTCTGGGCAAAGCCTTGCGAGTCATCATCCAAGAAATGCTGGAAGAAATCGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032770.4
ENSMUST00000207874.2
CDS CAA 72 bp TCTTCCAGCATTTCTTGGATGATGACTCGCAAGGCTTaGCCCAGAAGGCTGGCCGAGAGCCAGTGCGACAGA +
Preference number: 6 (lower is better)
Translates to: SSSISWMMTRKA*PRRLAESQCDR
Trigger: TCTGTCGCACTGGCTCTCGGCCAGCCTTCTGGGCAAAGCCTTGCGAGTCATCATCCAAGAAATGCTGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032770.4
ENSMUST00000207874.2
CDS CAA 90 bp TGCTGTACTTTGAGTCTGGACTTTCCCGATTTCTTCCAGCATTTCTaGGATGATGACTCGCAAGGCTTTGCCCAGAAGGCTGGCCGAGAG +
Preference number: 6 (lower is better)
Translates to: CCTLSLDFPDFFQHF*DDDSQGFAQKAGRE
Trigger: CTCTCGGCCAGCCTTCTGGGCAAAGCCTTGCGAGTCATCATCCAAGAAATGCTGGAAGAAATCGGGAAAGTCCAGACTCAAAGTACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032770.4
ENSMUST00000207874.2
CDS CCA 72 bp GATAGCCTCGGTTCTTACCACACTGTTCCAGAAAGATaGCCTTGGCAGAAGAGTCCATGCCCACATGCACAA +
Preference number: 6 (lower is better)
Translates to: DSLGSYHTVPER*PWQKSPCPHAQ
Trigger: TTGTGCATGTGGGCATGGACTCTTCTGCCAAGGCCATCTTTCTGGAACAGTGTGGTAAGAACCGAGGCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207874.2
CDS CAA 72 bp CCTCGGTTCTTACCACACTGTTCCAGAAAGATGGCCTaGGCAGAAGAGTCCATGCCCACATGCACAACAAGT +
Preference number: 6 (lower is better)
Translates to: PRFLPHCSRKMA*AEESMPTCTTS
Trigger: ACTTGTTGTGCATGTGGGCATGGACTCTTCTGCCAAGGCCATCTTTCTGGAACAGTGTGGTAAGAACCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207874.2
CDS CCA 72 bp CTCGGTTCTTACCACACTGTTCCAGAAAGATGGCCTTaGCAGAAGAGTCCATGCCCACATGCACAACAAGTT +
Preference number: 6 (lower is better)
Translates to: LGSYHTVPERWP*QKSPCPHAQQV
Trigger: AACTTGTTGTGCATGTGGGCATGGACTCTTCTGCCAAGGCCATCTTTCTGGAACAGTGTGGTAAGAACCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207874.2
CDS CAA 72 bp TTGAGTCTGGACTTTCCCGATTTCTTCCAGCATTTCTaGGATGATGACTCGCAAGGCTTTGCCCAGAAGGCT +
Preference number: 6 (lower is better)
Translates to: LSLDFPDFFQHF*DDDSQGFAQKA
Trigger: AGCCTTCTGGGCAAAGCCTTGCGAGTCATCATCCAAGAAATGCTGGAAGAAATCGGGAAAGTCCAGACTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032770.4
ENSMUST00000207874.2
CDS GCA 72 bp ACTGTTCCAGAAAGATGGCCTTGGCAGAAGAGTCCATaGCCACATGCACAACAAGTTGTGGTTGAAAATCTT +
Preference number: 6 (lower is better)
Translates to: TVPERWPWQKSP*PHAQQVVVENL
Trigger: AAGATTTTCAACCACAACTTGTTGTGCATGTGGGCATGGACTCTTCTGCCAAGGCCATCTTTCTGGAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207874.2
CDS CAA 72 bp AGAAGAGTCCATGCCCACATGCACAACAAGTTGTGGTaGAAAATCTTCCCAGATTGTGGTAAGCCTCCGTTT +
Preference number: 6 (lower is better)
Translates to: RRVHAHMHNKLW*KIFPDCGKPPF
Trigger: AAACGGAGGCTTACCACAATCTGGGAAGATTTTCAACCACAACTTGTTGTGCATGTGGGCATGGACTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207874.2