Pregenerated sensors for PGPEP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056204Ensembl transcript IDs: ENSMUST00000070173.9, ENSMUST00000209768.2, ENSMUST00000210307.2, ENSMUST00000210786.2, ENSMUST00000211715.2
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCAGGCCCCCTGTGGGGGCACCCAGGAAGCGCTCCCTAAGGTGTaGCTTCAGCTGCCCTGGGCGGAGCCAACCCAGGCTTTGAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: SQAPCGGTQEALPKV*LQLPWAEPTQALRE Trigger: TTCCCTCAAAGCCTGGGTTGGCTCCGCCCAGGGCAGCTGAAGCCACACCTTAGGGAGCGCTTCCTGGGTGCCCCCACAGGGGGCCTGGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR CCA 90 bp | GGGGGCACCCAGGAAGCGCTCCCTAAGGTGTGGCTTCAGCTGCCCTaGGCGGAGCCAACCCAGGCTTTGAGGGAAAAGAGCCTGGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: GGTQEALPKVWLQLP*AEPTQALREKSLVP Trigger: TGGCACCAGGCTCTTTTCCCTCAAAGCCTGGGTTGGCTCCGCCCAGGGCAGCTGAAGCCACACCTTAGGGAGCGCTTCCTGGGTGCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR GCA 90 bp | GTGGCCATGCCCGACACCCCAACATGCACTACGAGCTGGGGGCTGTaGTTCTCCCACAGTGCTGGGATGAGCCTCTGCACCGTCTGGTAT | + |
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Preference number: 1 (lower is better) Translates to: VAMPDTPTCTTSWGL*FSHSAGMSLCTVWY Trigger: ATACCAGACGGTGCAGAGGCTCATCCCAGCACTGTGGGAGAAGCACAGCCCCCAGCTCGTAGTGCATGTTGGGGTGTCGGGCATGGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210786.2 |
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| 3UTR GCA 90 bp | TGCAGCCTGGCAGGCCCTTCTCCCTTCTATCCCCCGGGGTCAGGATaGTTGGTGGGAGCTCTGGCCTCAAAGAGAAGACATACTGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: CSLAGPSPFYPPGSG*LVGALASKRRHTGP Trigger: AGGCCCAGTATGTCTTCTCTTTGAGGCCAGAGCTCCCACCAAGCATCCTGACCCCGGGGGATAGAAGGGAGAAGGGCCTGCCAGGCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR GCA 90 bp | ACTTTGCCATTAATGGTAAGGGCCAGCCAGGCCCAGGTCAGGCTCTaGCCACACATCTGCCTACCTCTTGAAGCCCCACCCACACTCCCC | + |
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Preference number: 1 (lower is better) Translates to: TLPLMVRASQAQVRL*PHICLPLEAPPTLP Trigger: GGGGAGTGTGGGTGGGGCTTCAAGAGGTAGGCAGATGTGTGGGCAGAGCCTGACCTGGGCCTGGCTGGCCCTTACCATTAATGGCAAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR CCA 90 bp | TGGCAGGCCCTTCTCCCTTCTATCCCCCGGGGTCAGGATGCTTGGTaGGAGCTCTGGCCTCAAAGAGAAGACATACTGGGCCTGAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: WQALLPSIPRGQDAW*ELWPQREDILGLKG Trigger: ACCCTTCAGGCCCAGTATGTCTTCTCTTTGAGGCCAGAGCTCCCACCAAGCATCCTGACCCCGGGGGATAGAAGGGAGAAGGGCCTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR CCA 90 bp | CAAGGTGGCCCCATGGCATGTGTGCAGACCACTAGCCCTGGCCTCTaGGCGCAGAAGTGTCCCCAGATGATATTCAGATGGGAGCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: QGGPMACVQTTSPGL*AQKCPQMIFRWELS Trigger: AGAGAGCTCCCATCTGAATATCATCTGGGGACACTTCTGCGCCCAGAGGCCAGGGCTAGTGGTCTGCACACATGCCATGGGGCCACCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR CCA 90 bp | CCAGGTCACATGCTACATCCCACCCTTCCTGAGAGCCCCTCCTCCTaGCTTGGCAGTTCAAAGTCAGCCAGAGACAAAGGCTGGCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: PGHMLHPTLPESPSS*LGSSKSARDKGWLE Trigger: CTCCAGCCAGCCTTTGTCTCTGGCTGACTTTGAACTGCCAAGCCAGGAGGAGGGGCTCTCAGGAAGGGTGGGATGTAGCATGTGACCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR CCA 90 bp | AGCCCTGGGGAATCCCTTACTCCTGAGCCCCCATCTTCCTGCCCATaGCTATCTGGGAAACTGCAGGGCCTCTCTCTCTGGAGAAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: SPGESLTPEPPSSCP*LSGKLQGLSLWRRC Trigger: ACACCTTCTCCAGAGAGAGAGGCCCTGCAGTTTCCCAGATAGCCATGGGCAGGAAGATGGGGGCTCAGGAGTAAGGGATTCCCCAGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR CCA 90 bp | CTTCTCCCTTCTATCCCCCGGGGTCAGGATGCTTGGTGGGAGCTCTaGCCTCAAAGAGAAGACATACTGGGCCTGAAGGGTCTCAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: LLPSIPRGQDAWWEL*PQREDILGLKGLRG Trigger: CCCTCTGAGACCCTTCAGGCCCAGTATGTCTTCTCTTTGAGGCCAGAGCTCCCACCAAGCATCCTGACCCCGGGGGATAGAAGGGAGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR GCA 90 bp | CACTGGCAGGAACTGTACTTGGTCTTGGAAGGAGTCCAGGTCACATaGTACATCCCACCCTTCCTGAGAGCCCCTCCTCCTGGCTTGGCA | + |
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Preference number: 1 (lower is better) Translates to: HWQELYLVLEGVQVT*YIPPFLRAPPPGLA Trigger: TGCCAAGCCAGGAGGAGGGGCTCTCAGGAAGGGTGGGATGTAGCATGTGACCTGGACTCCTTCCAAGACCAAGTACAGTTCCTGCCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR CCA 90 bp | ACTATGGTGATCCTGCCTCCAATTCTTGCAGTTTGGCCCTCCACGTaGCCTCAGGAAACACTGGAGTGGCCCAGGGCACAGCATGCTGGT | + |
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Preference number: 1 (lower is better) Translates to: TMVILPPILAVWPST*PQETLEWPRAQHAG Trigger: ACCAGCATGCTGTGCCCTGGGCCACTCCAGTGTTTCCTGAGGCCACGTGGAGGGCCAAACTGCAAGAATTGGAGGCAGGATCACCATAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR CCA 90 bp | GCCCCTCTATCTGTTTGCTCTCTCCAGCCTGTGGATGTAGAGAAATaGTGGGCTGGGGAGGGAGGCCACCTGCCTGGGTACACATTTGAG | + |
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Preference number: 1 (lower is better) Translates to: APLSVCSLQPVDVEK*WAGEGGHLPGYTFE Trigger: CTCAAATGTGTACCCAGGCAGGTGGCCTCCCTCCCCAGCCCACCATTTCTCTACATCCACAGGCTGGAGAGAGCAAACAGATAGAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR TCA 90 bp | CTAAGGTGTGGCTTCAGCTGCCCTGGGCGGAGCCAACCCAGGCTTTaGGGGAAAAGAGCCTGGTGCCAACCAGCATTAGTGAAACCTCTT | + |
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Preference number: 1 (lower is better) Translates to: LRCGFSCPGRSQPRL*GKRAWCQPALVKPL Trigger: AAGAGGTTTCACTAATGCTGGTTGGCACCAGGCTCTTTTCCCTCAAAGCCTGGGTTGGCTCCGCCCAGGGCAGCTGAAGCCACACCTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR GCA 90 bp | CAGCCAGAGACAAAGGCTGGCTGGAGTCCCTGGCACACTTCCAAATaGAGTTCAGCAGATATCCCTGTGGCTGATAGGACATGCAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: QPETKAGWSPWHTSK*SSADIPVADRTCRD Trigger: GTCCCTGCATGTCCTATCAGCCACAGGGATATCTGCTGAACTGCATTTGGAAGTGTGCCAGGGACTCCAGCCAGCCTTTGTCTCTGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR GCA 90 bp | CTCCACGTGGCCTCAGGAAACACTGGAGTGGCCCAGGGCACAGCATaGTGGTGTTGGTCTGAAAGCTACATCTCCACACCTAAGTTGATA | + |
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Preference number: 1 (lower is better) Translates to: LHVASGNTGVAQGTA*WCWSESYISTPKLI Trigger: TATCAACTTAGGTGTGGAGATGTAGCTTTCAGACCAACACCAGCATGCTGTGCCCTGGGCCACTCCAGTGTTTCCTGAGGCCACGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR CCA 90 bp | GCACCGCAGCCTCTCACCCCAGGTCCCTCACAGGATATTAGAGGCTaGCTATCTCAAGATGGAGAAAATCCACAGCTCCAGGTGATGGTT | + |
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Preference number: 1 (lower is better) Translates to: APQPLTPGPSQDIRG*LSQDGENPQLQVMV Trigger: AACCATCACCTGGAGCTGTGGATTTTCTCCATCTTGAGATAGCCAGCCTCTAATATCCTGTGAGGGACCTGGGGTGAGAGGCTGCGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR CCA 90 bp | GGTGGCATCCACAATGTACTTGGCTTCACTGGCAGGAACTGTACTTaGTCTTGGAAGGAGTCCAGGTCACATGCTACATCCCACCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: GGIHNVLGFTGRNCT*SWKESRSHATSHPS Trigger: GGAAGGGTGGGATGTAGCATGTGACCTGGACTCCTTCCAAGACCAAGTACAGTTCCTGCCAGTGAAGCCAAGTACATTGTGGATGCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR CCA 90 bp | CACGTGGCCTCAGGAAACACTGGAGTGGCCCAGGGCACAGCATGCTaGTGTTGGTCTGAAAGCTACATCTCCACACCTAAGTTGATATCA | + |
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Preference number: 1 (lower is better) Translates to: HVASGNTGVAQGTAC*CWSESYISTPKLIS Trigger: TGATATCAACTTAGGTGTGGAGATGTAGCTTTCAGACCAACACCAGCATGCTGTGCCCTGGGCCACTCCAGTGTTTCCTGAGGCCACGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR CCA 90 bp | GAACACAAAAACAAAGACATACGGGAACCAAAGTCAGATCCACCTTaGTCATCTCAGGGGGAGGCTGAGGCCACAGGACCAGGAGTTCAA | + |
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Preference number: 1 (lower is better) Translates to: EHKNKDIREPKSDPP*SSQGEAEATGPGVQ Trigger: TTGAACTCCTGGTCCTGTGGCCTCAGCCTCCCCCTGAGATGACCAAGGTGGATCTGACTTTGGTTCCCGTATGTCTTTGTTTTTGTGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR GCA 90 bp | ACACGTTGGAGGGCCAGCCTGAGCTACAGAGGTCAGGTAGAACTCTaGCTCAGAACACAAAAACAAAGACATACGGGAACCAAAGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: TRWRASLSYRGQVEL*LRTQKQRHTGTKVR Trigger: TCTGACTTTGGTTCCCGTATGTCTTTGTTTTTGTGTTCTGAGGCAGAGTTCTACCTGACCTCTGTAGCTCAGGCTGGCCCTCCAACGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR TCA 90 bp | GGCTATAGGAGACCCAGTCTCACAAACAACAAGAAGATCCAGGGATaGGAAGTCACTTCAGAATTCAGATCCATCAATCCCGTGGGGACA | + |
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Preference number: 1 (lower is better) Translates to: GYRRPSLTNNKKIQG*EVTSEFRSINPVGT Trigger: TGTCCCCACGGGATTGATGGATCTGAATTCTGAAGTGACTTCTCATCCCTGGATCTTCTTGTTGTTTGTGAGACTGGGTCTCCTATAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR TCA 90 bp | GGGTTTAAGACATGGATTAGAGCTAATCTACTTTATGATACTTTGTaGGGCCCCAGCCACAGGGCAAGCTTCAACTCCTTGTCCATACAC | + |
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Preference number: 1 (lower is better) Translates to: GFKTWIRANLLYDTL*GPSHRASFNSLSIH Trigger: GTGTATGGACAAGGAGTTGAAGCTTGCCCTGTGGCTGGGGCCTCACAAAGTATCATAAAGTAGATTAGCTCTAATCCATGTCTTAAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070173.9 ENSMUST00000211715.2 |
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| 3UTR TCA 90 bp | CAGCATGCTGGTGTTGGTCTGAAAGCTACATCTCCACACCTAAGTTaGTATCATAAATCAGACACTTTCTCAGACTGGCTGAGACCTCAG | + |
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Preference number: 1 (lower is better) Translates to: QHAGVGLKATSPHLS*YHKSDTFSDWLRPQ Trigger: CTGAGGTCTCAGCCAGTCTGAGAAAGTGTCTGATTTATGATATCAACTTAGGTGTGGAGATGTAGCTTTCAGACCAACACCAGCATGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR CCA 90 bp | ACACCAGCCAGGCCCCCTGTGGGGGCACCCAGGAAGCGCTCCCTAAGGTGTGGCTCCCAGAGGGGACTCTaGGCTCAGACACTCCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: TPARPPVGAPRKRSLRCGSQRGL*AQTLQG Trigger: CCCTTGGAGTGTCTGAGCCCAGAGTCCCCTCTGGGA...GCCACACCTTAGGGAGCGCTTCCTGGGTGCCCCCACAGGGGGCCTGGCTGGTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGCCCCCTGTGGGGGCACCCAGGAAGCGCTCCCTAAGGTGTGGCTTCAGCAGCCAACCCAGGCTTTaGGGGAAAAGAGCCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: ARPPVGAPRKRSLRCGFSSQPRL*GKRAWC Trigger: GCACCAGGCTCTTTTCCCTCAAAGCCTGGGTTGGCT...GCTGAAGCCACACCTTAGGGAGCGCTTCCTGGGTGCCCCCACAGGGGGCCTGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR CAA 90 bp | AGGGTCGGCTCCCCACAGGCACCAGAGGCTACTGCGGCCAGGCCCTaGGTGGCCATAGCAGCCTGCTCTTCTGAGCAAAGGGAACCCACT | + |
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Preference number: 2 (lower is better) Translates to: RVGSPQAPEATAARP*VAIAACSSEQREPT Trigger: AGTGGGTTCCCTTTGCTCAGAAGAGCAGGCTGCTATGGCCACCAAGGGCCTGGCCGCAGTAGCCTCTGGTGCCTGTGGGGAGCCGACCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR GCA 90 bp | ACACCAGCCAGGCCCCCTGTGGGGGCACCCAGGAAGCGCTCCCTAAGGTGTGGCCCTGCCTCCAATTCTTaGAGTTTGGCCCTCCACGTG | + |
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Preference number: 2 (lower is better) Translates to: TPARPPVGAPRKRSLRCGPASNS*SLALHV Trigger: CACGTGGAGGGCCAAACTGCAAGAATTGGAGGCAGG...GCCACACCTTAGGGAGCGCTTCCTGGGTGCCCCCACAGGGGGCCTGGCTGGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGCCCCCTGTGGGGGCACCCAGGAAGCGCTCCCTAAGGTGTGGCTTCAGCGCCTGGGTACACATTTaGGAAGCCATCGGCATGCAT | + |
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Preference number: 2 (lower is better) Translates to: ARPPVGAPRKRSLRCGFSAWVHI*EAIGMH Trigger: ATGCATGCCGATGGCTTCTCAAATGTGTACCCAGGC...GCTGAAGCCACACCTTAGGGAGCGCTTCCTGGGTGCCCCCACAGGGGGCCTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTCTCAAATCCCAGCCTGGCCTCTAACTTGGAGTGTAGGGGGAGGCTGGCCTGGCACCAGAGGCTACTaGGGCCAGGCCCTTGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: VSQIPAWPLTWSVGGGWPGTRGY*GQALGG Trigger: GCCACCAAGGGCCTGGCCGCAGTAGCCTCTGGTGCC...AGGCCAGCCTCCCCCTACACTCCAAGTTAGAGGCCAGGCTGGGATTTGAGAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGATCTCGTACACATGCAGGTCCACGCTGTCCCCGAGGCCCAGCTTCTCCAGCTGTCATGCCTGCACTaGAGTCTGAGACAGGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: GDLVHMQVHAVPEAQLLQLSCLH*SLRQEN Trigger: GTTCTCCTGTCTCAGACTCCAGTGCAGGCATGACAG...CTGGAGAAGCTGGGCCTCGGGGACAGCGTGGACCTGCATGTGTACGAGATCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210786.2 |
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| 3UTR CAA 90 bp | GTCACATGCTACATCCCACCCTTCCTGAGAGCCCCTCCTCCTGGCTaGGCAGTTCAAAGTCAGCCAGAGACAAAGGCTGGCTGGAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: VTCYIPPFLRAPPPG*AVQSQPETKAGWSP Trigger: GGGACTCCAGCCAGCCTTTGTCTCTGGCTGACTTTGAACTGCCAAGCCAGGAGGAGGGGCTCTCAGGAAGGGTGGGATGTAGCATGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR TCA 90 bp | GCCCAGGGCACAGCATGCTGGTGTTGGTCTGAAAGCTACATCTCCACACCTAAGATCTCAGGGGGAGGCTaGGGCCACAGGACCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: AQGTACWCWSESYISTPKISGGG*GHRTRS Trigger: ACTCCTGGTCCTGTGGCCTCAGCCTCCCCCTGAGAT...CTTAGGTGTGGAGATGTAGCTTTCAGACCAACACCAGCATGCTGTGCCCTGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTCTCAAATCCCAGCCTGGCCTCTAACTTGGAGTGTAGGGGGAGGCTGGCCTGCCCAGGGCACAGCATaGTGGTGTTGGTCTGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: VSQIPAWPLTWSVGGGWPAQGTA*WCWSES Trigger: GCTTTCAGACCAACACCAGCATGCTGTGCCCTGGGC...AGGCCAGCCTCCCCCTACACTCCAAGTTAGAGGCCAGGCTGGGATTTGAGAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR CAA 90 bp | CCTAAGGTGTGGCTTCAGCTGCCCTGGGCGGAGCCAACCCAGGCTTaGAGGGAAAAGAGCCTGGTGCCAACCAGCATTAGTGAAACCTCT | + |
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Preference number: 2 (lower is better) Translates to: PKVWLQLPWAEPTQA*REKSLVPTSISETS Trigger: AGAGGTTTCACTAATGCTGGTTGGCACCAGGCTCTTTTCCCTCAAAGCCTGGGTTGGCTCCGCCCAGGGCAGCTGAAGCCACACCTTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR TCA 90 bp | ACCCCAACATGCACTACGAGCTGGGGGCTGTGCTTCTCCCACAGTGCTGGGATGGCCTGCACTGGAGTCTaGGACAGGAGAACAGAATGT | + |
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Preference number: 2 (lower is better) Translates to: TPTCTTSWGLCFSHSAGMACTGV*DRRTEC Trigger: ACATTCTGTTCTCCTGTCTCAGACTCCAGTGCAGGC...CATCCCAGCACTGTGGGAGAAGCACAGCCCCCAGCTCGTAGTGCATGTTGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210786.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGGAGGCAAAAGAGGCCGCCCTCCCCAGGAGAAAGGAAAGACACTTGTTGCTTTATGATACTTTGTaGGGCCCCAGCCACAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: GQEAKEAALPRRKERHLLLYDTL*GPSHRA Trigger: TGCCCTGTGGCTGGGGCCTCACAAAGTATCATAAAG...CAACAAGTGTCTTTCCTTTCTCCTGGGGAGGGCGGCCTCTTTTGCCTCCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTCAGCTGCCCTGGGCGGAGCCAACCCAGGCTTTGAGGGAAAAGAGCCTGAGCATGGTGTTCCCATaGCAGGGACTTTGGGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: WLQLPWAEPTQALREKSLSMVFP*QGLWEN Trigger: ATTTTCCCAAAGTCCCTGGCATGGGAACACCATGCT...CAGGCTCTTTTCCCTCAAAGCCTGGGTTGGCTCCGCCCAGGGCAGCTGAAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR CCA 90 bp | CGGGGTCAGGATGCTTGGTGGGAGCTCTGGCCTCAAAGAGAAGACATACTGGGCGAACAAGAAAGATCATaGCAGGGTCGGCTCCCCACA | + |
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Preference number: 2 (lower is better) Translates to: RGQDAWWELWPQREDILGEQERS*QGRLPT Trigger: TGTGGGGAGCCGACCCTGCCATGATCTTTCTTGTTC...GCCCAGTATGTCTTCTCTTTGAGGCCAGAGCTCCCACCAAGCATCCTGACCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR CCA 90 bp | CGGGGTCAGGATGCTTGGTGGGAGCTCTGGCCTCAAAGAGAAGACATACTGGGCCCATCTTCCTGCCCATaGCTATCTGGGAAACTGCAG | + |
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Preference number: 2 (lower is better) Translates to: RGQDAWWELWPQREDILGPSSCP*LSGKLQ Trigger: CTGCAGTTTCCCAGATAGCCATGGGCAGGAAGATGG...GCCCAGTATGTCTTCTCTTTGAGGCCAGAGCTCCCACCAAGCATCCTGACCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR CCA 90 bp | GTCTCTCAAATCCCAGCCTGGCCTCTAACTTGGAGTGTAGGGGGAGGCTGGCCTCCCTGCACAAGTCCCTaGCTTCAGGTTTATGCCATG | + |
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Preference number: 2 (lower is better) Translates to: VSQIPAWPLTWSVGGGWPPCTSP*LQVYAM Trigger: CATGGCATAAACCTGAAGCCAGGGACTTGTGCAGGG...AGGCCAGCCTCCCCCTACACTCCAAGTTAGAGGCCAGGCTGGGATTTGAGAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR CAA 90 bp | AATCCCAGCCTGGCCTCTAACTTGGAGTGTAGGGGGAGGCTGGCCTaGAACTCTTGTTCTGCCTCCAGGACCATTGCCTGGATGATGCAA | + |
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Preference number: 2 (lower is better) Translates to: NPSLASNLECRGRLA*NSCSASRTIAWMMQ Trigger: TTGCATCATCCAGGCAATGGTCCTGGAGGCAGAACAAGAGTTCAAGGCCAGCCTCCCCCTACACTCCAAGTTAGAGGCCAGGCTGGGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR GCA 90 bp | TCTACCACTGCTGTCCCTGCACAAGTCCCTGGCTTCAGGTTTATGCCATGTTACGCCCAGGTCAGGCTCTaGCCACACATCTGCCTACCT | + |
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Preference number: 2 (lower is better) Translates to: STTAVPAQVPGFRFMPCYAQVRL*PHICLP Trigger: AGGTAGGCAGATGTGTGGGCAGAGCCTGACCTGGGC...GTAACATGGCATAAACCTGAAGCCAGGGACTTGTGCAGGGACAGCAGTGGTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR CCA 90 bp | TCCCGTGGGGACACCGAGGTCTCTATCCATCCACAAAAGAGAAGGTGGCATCCAGAGAGCCCCTCCTCCTaGCTTGGCAGTTCAAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SRGDTEVSIHPQKRRWHPESPSS*LGSSKS Trigger: TGACTTTGAACTGCCAAGCCAGGAGGAGGGGCTCTC...TGGATGCCACCTTCTCTTTTGTGGATGGATAGAGACCTCGGTGTCCCCACGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGCCTCCAATTCTTGCAGTTTGGCCCTCCACGTGGCCTCAGGAAACACTGGATGGAGACCCAAAGTATaGTGGCATTTTCAGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PASNSCSLALHVASGNTGWRPKV*WHFQGR Trigger: CCTGCCCTGAAAATGCCATCATACTTTGGGTCTCCA...TCCAGTGTTTCCTGAGGCCACGTGGAGGGCCAAACTGCAAGAATTGGAGGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR CCA 90 bp | CTATCTCAAGATGGAGAAAATCCACAGCTCCAGGTGATGGTTCACACGGTAGGTACTAGCCCTGGCCTCTaGGCGCAGAAGTGTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LSQDGENPQLQVMVHTVGTSPGL*AQKCPQ Trigger: CTGGGGACACTTCTGCGCCCAGAGGCCAGGGCTAGT...ACCTACCGTGTGAACCATCACCTGGAGCTGTGGATTTTCTCCATCTTGAGATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR-3UTR CCA 90 bp | AGACAGAAACAGACAGAAGATAGAAAAGGCAACCAGGTCCCAAGTGGCTTTGGCACTAGCCCTGGCCTCTaGGCGCAGAAGTGTCCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RQKQTEDRKGNQVPSGFGTSPGL*AQKCPQ Trigger: CTGGGGACACTTCTGCGCCCAGAGGCCAGGGCTAGT...GCCAAAGCCACTTGGGACCTGGTTGCCTTTTCTATCTTCTGTCTGTTTCTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070173.9 ENSMUST00000211715.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTACCACTGCTGTCCCTGCACAAGTCCCTGGCTTCAGGTTTATGCCATGTTACGGGTGCCCTCAACCCTaGGATTCAGAAAGAGAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: STTAVPAQVPGFRFMPCYGCPQP*DSEREP Trigger: TGGCTCTCTTTCTGAATCTCAGGGTTGAGGGCACCC...GTAACATGGCATAAACCTGAAGCCAGGGACTTGTGCAGGGACAGCAGTGGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR-3UTR GCA 90 bp | GTCTCTCAAATCCCAGCCTGGCCTCTAACTTGGAGTGTAGGGGGAGGCTGGCCTTTCCTAAGGAAGACTTaGCAGGCACTGATACATCTG | + |
|
Preference number: 2 (lower is better) Translates to: VSQIPAWPLTWSVGGGWPFLRKT*QALIHL Trigger: CAGATGTATCAGTGCCTGGCAAGTCTTCCTTAGGAA...AGGCCAGCCTCCCCCTACACTCCAAGTTAGAGGCCAGGCTGGGATTTGAGAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CAA 90 bp | AGGTGGCATCCACAATGTACTTGGCTTCACTGGCAGGAACTGTACTaGGTCTTGGAAGGAGTCCAGGTCACATGCTACATCCCACCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: RWHPQCTWLHWQELY*VLEGVQVTCYIPPF Trigger: GAAGGGTGGGATGTAGCATGTGACCTGGACTCCTTCCAAGACCAAGTACAGTTCCTGCCAGTGAAGCCAAGTACATTGTGGATGCCACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTCTGGCCTCAAAGAGAAGACATACTGGGCCTGAAGGGTCTCAGAGGGCAGAGCACTGAAGGAAGGTaGGTACAACAAAGAAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: ELWPQREDILGLKGLRGQSTEGR*VQQRRM Trigger: CATCCTTCTTTGTTGTACCCACCTTCCTTCAGTGCT...CTGCCCTCTGAGACCCTTCAGGCCCAGTATGTCTTCTCTTTGAGGCCAGAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CAA 90 bp | CATCCACAATGTACTTGGCTTCACTGGCAGGAACTGTACTTGGTCTaGGAAGGAGTCCAGGTCACATGCTACATCCCACCCTTCCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: HPQCTWLHWQELYLV*EGVQVTCYIPPFLR Trigger: TCTCAGGAAGGGTGGGATGTAGCATGTGACCTGGACTCCTTCCAAGACCAAGTACAGTTCCTGCCAGTGAAGCCAAGTACATTGTGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR-3UTR GCA 90 bp | GCTCTGAGAGTAAGGCTTTGTCTCTATGTTCCCAGAGGGGACTCTGGGCTCAGACTGGCTTCAGGTTTATaGCATGTTACTTCTCTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: ALRVRLCLYVPRGDSGLRLASGL*HVTSLA Trigger: AGCAAGAGAAGTAACATGGCATAAACCTGAAGCCAG...TCTGAGCCCAGAGTCCCCTCTGGGAACATAGAGACAAAGCCTTACTCTCAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGGCCCCCTGTGGGGGCACCCAGGAAGCGCTCCCTAAGGTGTGGCTTCAGCGAGCCAACCCAGGCTTaGAGGGAAAAGAGCCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: ARPPVGAPRKRSLRCGFSEPTQA*REKSLV Trigger: CACCAGGCTCTTTTCCCTCAAAGCCTGGGTTGGCTC...GCTGAAGCCACACCTTAGGGAGCGCTTCCTGGGTGCCCCCACAGGGGGCCTGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR GCA 72 bp | GACTGCGTCAGGGTCAAGGTGGCCCCATGGCATGTGTaGAGACCACTAGCCCTGGCCTCTGGGCGCAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: DCVRVKVAPWHV*RPLALASGRRS Trigger: ACTTCTGCGCCCAGAGGCCAGGGCTAGTGGTCTGCACACATGCCATGGGGCCACCTTGACCCTGACGCAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070173.9 ENSMUST00000211715.2 |
||
| 3UTR GCA 72 bp | CCCGACACCCCAACATGCACTACGAGCTGGGGGCTGTaGTTCTCCCACAGTGCTGGGATGAGCCTCTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: PDTPTCTTSWGL*FSHSAGMSLCT Trigger: GGTGCAGAGGCTCATCCCAGCACTGTGGGAGAAGCACAGCCCCCAGCTCGTAGTGCATGTTGGGGTGTCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210786.2 |
||
| 3UTR GCA 72 bp | CAGATATCCCTGTGGCTGATAGGACATGCAGGGACATaGCTGGGCACCGCAGCCTCTCACCCCAGGTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: QISLWLIGHAGT*LGTAASHPRSL Trigger: GAGGGACCTGGGGTGAGAGGCTGCGGTGCCCAGGCATGTCCCTGCATGTCCTATCAGCCACAGGGATATCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR GCA 72 bp | GCTACTGCGGCCAGGCCCTTGGTGGCCATAGCAGCCTaGTCTTCTGAGCAAAGGGAACCCACTATGGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: ATAARPLVAIAA*SSEQREPTMET Trigger: GGTCTCCATAGTGGGTTCCCTTTGCTCAGAAGAGCAGGCTGCTATGGCCACCAAGGGCCTGGCCGCAGTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR GCA 72 bp | TTAATGGTAAGGGCCAGCCAGGCCCAGGTCAGGCTCTaGCCACACATCTGCCTACCTCTTGAAGCCCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: LMVRASQAQVRL*PHICLPLEAPP Trigger: GGGTGGGGCTTCAAGAGGTAGGCAGATGTGTGGGCAGAGCCTGACCTGGGCCTGGCTGGCCCTTACCATTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | CCTTGTGGTCCATTAGGAGGGGCAGATGAGTCAGGATaGCCCCTCTCTCGGCACCGCACCCAGGTGTACATG | + |
|
Preference number: 3 (lower is better) Translates to: PCGPLGGADESG*PLSRHRTQVYM Trigger: CATGTACACCTGGGTGCGGTGCCGAGAGAGGGGCCATCCTGACTCATCTGCCCCTCCTAATGGACCACAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR GCA 72 bp | TGCAGTTCAGCAGATATCCCTGTGGCTGATAGGACATaGAGGGACATGCCTGGGCACCGCAGCCTCTCACCC | + |
|
Preference number: 3 (lower is better) Translates to: CSSADIPVADRT*RDMPGHRSLSP Trigger: GGGTGAGAGGCTGCGGTGCCCAGGCATGTCCCTGCATGTCCTATCAGCCACAGGGATATCTGCTGAACTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR GCA 72 bp | CCTGGGGAATCCCTTACTCCTGAGCCCCCATCTTCCTaGCCATGGCTATCTGGGAAACTGCAGGGCCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PGESLTPEPPSS*PWLSGKLQGLS Trigger: AGAGAGGCCCTGCAGTTTCCCAGATAGCCATGGGCAGGAAGATGGGGGCTCAGGAGTAAGGGATTCCCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR GCA 72 bp | GCAGGCCCTTCTCCCTTCTATCCCCCGGGGTCAGGATaGTTGGTGGGAGCTCTGGCCTCAAAGAGAAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: AGPSPFYPPGSG*LVGALASKRRH Trigger: ATGTCTTCTCTTTGAGGCCAGAGCTCCCACCAAGCATCCTGACCCCGGGGGATAGAAGGGAGAAGGGCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR GCA 72 bp | ATGCACTACGAGCTGGGGGCTGTGCTTCTCCCACAGTaGTGGGATGAGCCTCTGCACCGTCTGGTATTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: MHYELGAVLLPQ*WDEPLHRLVFH Trigger: GTGGAATACCAGACGGTGCAGAGGCTCATCCCAGCACTGTGGGAGAAGCACAGCCCCCAGCTCGTAGTGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210786.2 |
||
| 3UTR CCA 72 bp | GGGCCTCTCTCTCTGGAGAAGGTGTTAGCACAGGACTaGGGGGAGGGTAAGAGGGGGAGCCCTCGTTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: GPLSLEKVLAQD*GEGKRGSPRYS Trigger: TGAATAACGAGGGCTCCCCCTCTTACCCTCCCCCCAGTCCTGTGCTAACACCTTCTCCAGAGAGAGAGGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | GTTTGGCCCTCCACGTGGCCTCAGGAAACACTGGAGTaGCCCAGGGCACAGCATGCTGGTGTTGGTCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VWPSTWPQETLE*PRAQHAGVGLK Trigger: TTTCAGACCAACACCAGCATGCTGTGCCCTGGGCCACTCCAGTGTTTCCTGAGGCCACGTGGAGGGCCAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | ATCCTGCCTCCAATTCTTGCAGTTTGGCCCTCCACGTaGCCTCAGGAAACACTGGAGTGGCCCAGGGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: ILPPILAVWPST*PQETLEWPRAQ Trigger: CTGTGCCCTGGGCCACTCCAGTGTTTCCTGAGGCCACGTGGAGGGCCAAACTGCAAGAATTGGAGGCAGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGGCCCACACCCATAGATGCCTTTGTAGGGACAGCAAATCACCCTGGGGCACTCTCAATTGCCCCCTaGTGGTCCATTAGGAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: CRPTPIDAFVGTANHPGALSIAP*WSIRRG Trigger: GCCCCTCCTAATGGACCACAAGGGGGCAATTGAGAG...TGCCCCAGGGTGATTTGCTGTCCCTACAAAGGCATCTATGGGTGTGGGCCTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR TCA 72 bp | AAAGTCAGATCCACCTTGGTCATCTCAGGGGGAGGCTaGGGCCACAGGACCAGGAGTTCAAGGCCTGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: KVRSTLVISGGG*GHRTRSSRPAL Trigger: CAAGGCAGGCCTTGAACTCCTGGTCCTGTGGCCTCAGCCTCCCCCTGAGATGACCAAGGTGGATCTGACTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | CCCATGGCATGTGTGCAGACCACTAGCCCTGGCCTCTaGGCGCAGAAGTGTCCCCAGATGATATTCAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: PMACVQTTSPGL*AQKCPQMIFRW Trigger: CCATCTGAATATCATCTGGGGACACTTCTGCGCCCAGAGGCCAGGGCTAGTGGTCTGCACACATGCCATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070173.9 ENSMUST00000211715.2 |
||
| 3UTR CCA 72 bp | GAATCCCTTACTCCTGAGCCCCCATCTTCCTGCCCATaGCTATCTGGGAAACTGCAGGGCCTCTCTCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ESLTPEPPSSCP*LSGKLQGLSLW Trigger: CCAGAGAGAGAGGCCCTGCAGTTTCCCAGATAGCCATGGGCAGGAAGATGGGGGCTCAGGAGTAAGGGATTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | GGGGCGCAGGCACAAGCATCCTGTGCACACAGCAGCTaGTCTGACTTCCAGCCAAAGTCCTCACTCAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: GAQAQASCAHSS*SDFQPKSSLKS Trigger: GCTTTTGAGTGAGGACTTTGGCTGGAAGTCAGACCAGCTGCTGTGTGCACAGGATGCTTGTGCCTGCGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | TCTATCCCCCGGGGTCAGGATGCTTGGTGGGAGCTCTaGCCTCAAAGAGAAGACATACTGGGCCTGAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SIPRGQDAWWEL*PQREDILGLKG Trigger: ACCCTTCAGGCCCAGTATGTCTTCTCTTTGAGGCCAGAGCTCCCACCAAGCATCCTGACCCCGGGGGATAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | CTTCTCCCTTCTATCCCCCGGGGTCAGGATGCTTGGTaGGAGCTCTGGCCTCAAAGAGAAGACATACTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLPSIPRGQDAW*ELWPQREDILG Trigger: GCCCAGTATGTCTTCTCTTTGAGGCCAGAGCTCCCACCAAGCATCCTGACCCCGGGGGATAGAAGGGAGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | TTCTCCCACAGTGCTGGGATGAGCCTCTGCACCGTCTaGTATTCCACGGGGATCTCGTACACATGCAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: FSHSAGMSLCTV*YSTGISYTCRS Trigger: GGACCTGCATGTGTACGAGATCCCCGTGGAATACCAGACGGTGCAGAGGCTCATCCCAGCACTGTGGGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210786.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCTCAAATCCCAGCCTGGCCTCTAACTTGGAGTGTAGGGGGAGGCTGGCCTTGGGAGCTCTCTCAATaGCCCCCTTGTGGTCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: VSQIPAWPLTWSVGGGWPWELSQ*PPCGPL Trigger: TAATGGACCACAAGGGGGCAATTGAGAGAGCTCCCA...AGGCCAGCCTCCCCCTACACTCCAAGTTAGAGGCCAGGCTGGGATTTGAGAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR TCA 72 bp | CTAGCCCTGGCCTCTGGGCGCAGAAGTGTCCCCAGATaGTATTCAGATGGGAGCTCTCTCAATTGCCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LALASGRRSVPR*YSDGSSLNCPL Trigger: AAGGGGGCAATTGAGAGAGCTCCCATCTGAATATCATCTGGGGACACTTCTGCGCCCAGAGGCCAGGGCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR TCA 72 bp | GACCTGGACCTCAAGGGTCAATGTGACCAGTCTAGGTaGCACCTGGCAACTACAGACCCTGAGCCCTACCTG | + |
|
Preference number: 3 (lower is better) Translates to: DLDLKGQCDQSR*HLATTDPEPYL Trigger: CAGGTAGGGCTCAGGGTCTGTAGTTGCCAGGTGTCACCTAGACTGGTCACATTGACCCTTGAGGTCCAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR TCA 72 bp | TGGCCTCTAACTTGGAGTGTAGGGGGAGGCTGGCCTTaGACTCTTGTTCTGCCTCCAGGACCATTGCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: WPLTWSVGGGWP*TLVLPPGPLPG Trigger: TCCAGGCAATGGTCCTGGAGGCAGAACAAGAGTTCAAGGCCAGCCTCCCCCTACACTCCAAGTTAGAGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR TCA 72 bp | GGGAGCTCTGGCCTCAAAGAGAAGACATACTGGGCCTaGAGGGTCTCAGAGGGCAGAAGTGCCCTGTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GSSGLKEKTYWA*RVSEGRSALLR Trigger: TCTCAACAGGGCACTTCTGCCCTCTGAGACCCTTCAGGCCCAGTATGTCTTCTCTTTGAGGCCAGAGCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR GCA 72 bp | AGCCCCCATCTTCCTGCCCATGGCTATCTGGGAAACTaGAGGGCCTCTCTCTCTGGAGAAGGTGTTAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: SPHLPAHGYLGN*RASLSGEGVST Trigger: TGTGCTAACACCTTCTCCAGAGAGAGAGGCCCTGCAGTTTCCCAGATAGCCATGGGCAGGAAGATGGGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR GCA 72 bp | AAGACTTGCCAGGCACTGATACATCTGAAGCAGGACTaGCACACGTTGGAGGGCCAGCCTGAGCTACAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KTCQALIHLKQD*HTLEGQPELQR Trigger: CCTCTGTAGCTCAGGCTGGCCCTCCAACGTGTGGCAGTCCTGCTTCAGATGTATCAGTGCCTGGCAAGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | ACGGTAGGTTCTGGGTCCCAGGTGGGCCATGTGTGGTaGCAAACACCTGTCCCCTTAGTGCTTAGGAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: TVGSGSQVGHVW*QTPVPLVLRKL Trigger: CAGTTTCCTAAGCACTAAGGGGACAGGTGTTTGCCACCACACATGGCCCACCTGGGACCCAGAACCTACCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | CACACGGTAGGTTCTGGGTCCCAGGTGGGCCATGTGTaGTGGCAAACACCTGTCCCCTTAGTGCTTAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: HTVGSGSQVGHV*WQTPVPLVLRK Trigger: TTTCCTAAGCACTAAGGGGACAGGTGTTTGCCACCACACATGGCCCACCTGGGACCCAGAACCTACCGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | ATGCTACATCCCACCCTTCCTGAGAGCCCCTCCTCCTaGCTTGGCAGTTCAAAGTCAGCCAGAGACAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: MLHPTLPESPSS*LGSSKSARDKG Trigger: GCCTTTGTCTCTGGCTGACTTTGAACTGCCAAGCCAGGAGGAGGGGCTCTCAGGAAGGGTGGGATGTAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | CTCCCCAGGGTAAGCATGGGAAATGAAGGTCAGTGCTaGGGTGACCTGGACCTCAAGGGTCAATGTGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: LPRVSMGNEGQC*GDLDLKGQCDQ Trigger: CTGGTCACATTGACCCTTGAGGTCCAGGTCACCCCAGCACTGACCTTCATTTCCCATGCTTACCCTGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | CCCACTATGGTGATCCTGCCTCCAATTCTTGCAGTTTaGCCCTCCACGTGGCCTCAGGAAACACTGGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PTMVILPPILAV*PSTWPQETLEW Trigger: CCACTCCAGTGTTTCCTGAGGCCACGTGGAGGGCCAAACTGCAAGAATTGGAGGCAGGATCACCATAGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | CCTTGTTGTGCCCACATTTTTCCAGCGTCACTGTGGTaGCCATGCCCGACACCCCAACATGCACTACGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PCCAHIFPASLW*PCPTPQHALRA Trigger: AGCTCGTAGTGCATGTTGGGGTGTCGGGCATGGCCACCACAGTGACGCTGGAAAAATGTGGGCACAACAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210786.2 |
||
| 3UTR TCA 72 bp | CACAGGACCAGGAGTTCAAGGCCTGCCTTGTCTACATaGTGTCTCAAAAGCCCAGAGCCCTGGGGAATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: HRTRSSRPALST*CLKSPEPWGIP Trigger: AGGGATTCCCCAGGGCTCTGGGCTTTTGAGACATCATGTAGACAAGGCAGGCCTTGAACTCCTGGTCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | AACCCTTGTTGTGCCCACATTTTTCCAGCGTCACTGTaGTGGCCATGCCCGACACCCCAACATGCACTACGA | + |
|
Preference number: 3 (lower is better) Translates to: NPCCAHIFPASL*WPCPTPQHALR Trigger: TCGTAGTGCATGTTGGGGTGTCGGGCATGGCCACCACAGTGACGCTGGAAAAATGTGGGCACAACAAGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210786.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCCTCCAATTCTTGCAGTTTGGCCCTCCACGTGGCCTCAGGAAACACTGGATTCAGCTACAGTGAATaGGAGGCTAGCCTGGGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: PASNSCSLALHVASGNTGFSYSE*EASLGY Trigger: ATAGCCCAGGCTAGCCTCCAATTCACTGTAGCTGAA...TCCAGTGTTTCCTGAGGCCACGTGGAGGGCCAAACTGCAAGAATTGGAGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTTCAGCTGCCCTGGGCGGAGCCAACCCAGGCTTTGAGGGAAAAGAGCCTGTTTCAAACCCAAACATaGACTTGGGTTCATTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: WLQLPWAEPTQALREKSLFQTQT*TWVHSP Trigger: AGGGGAATGAACCCAAGTCAATGTTTGGGTTTGAAA...CAGGCTCTTTTCCCTCAAAGCCTGGGTTGGCTCCGCCCAGGGCAGCTGAAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR TCA 72 bp | GGCAAGGAATTCAAGGTCACCCTCAGCCACATAGTGTaGAGCCAGCCCAGGCTACACAAGATCCTGTACCAC | + |
|
Preference number: 3 (lower is better) Translates to: GKEFKVTLSHIV*SQPRLHKILYH Trigger: GTGGTACAGGATCTTGTGTAGCCTGGGCTGGCTTCACACTATGTGGCTGAGGGTGACCTTGAATTCCTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR TCA 72 bp | GTGACCAGTGTCCCTGACACCAGTGACAGGCCTTACTaGCAGGCATGTTTAGTGGCTGTGGCAACTCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VTSVPDTSDRPY*QACLVAVATQD Trigger: ATCCTGAGTTGCCACAGCCACTAAACATGCCTGTCAGTAAGGCCTGTCACTGGTGTCAGGGACACTGGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR GCA 72 bp | CTTCAACTCCTTGTCCATACACCTGAAAATGCAGACTaGGTCAGGGTCAAGGTGGCCCCATGGCATGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LQLLVHTPENAD*VRVKVAPWHVC Trigger: GCACACATGCCATGGGGCCACCTTGACCCTGACGCAGTCTGCATTTTCAGGTGTATGGACAAGGAGTTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070173.9 ENSMUST00000211715.2 |
||
| 3UTR CCA 72 bp | TGGCTTGGCAGTTCAAAGTCAGCCAGAGACAAAGGCTaGCTGGAGTCCCTGGCACACTTCCAAATGCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: WLGSSKSARDKG*LESLAHFQMQF Trigger: GAACTGCATTTGGAAGTGTGCCAGGGACTCCAGCCAGCCTTTGTCTCTGGCTGACTTTGAACTGCCAAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | AACAAAGACATACGGGAACCAAAGTCAGATCCACCTTaGTCATCTCAGGGGGAGGCTGAGGCCACAGGACCA | + |
|
Preference number: 3 (lower is better) Translates to: NKDIREPKSDPP*SSQGEAEATGP Trigger: TGGTCCTGTGGCCTCAGCCTCCCCCTGAGATGACCAAGGTGGATCTGACTTTGGTTCCCGTATGTCTTTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR TCA 72 bp | CTGAGCAAAGGGAACCCACTATGGAGACCCAAAGTATaGTGGCATTTTCAGGGCAGGAGGCAAAAGAGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: LSKGNPLWRPKV*WHFQGRRQKRP Trigger: CGGCCTCTTTTGCCTCCTGCCCTGAAAATGCCATCATACTTTGGGTCTCCATAGTGGGTTCCCTTTGCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR GCA 72 bp | ACAAAGGCTGGCTGGAGTCCCTGGCACACTTCCAAATaGAGTTCAGCAGATATCCCTGTGGCTGATAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: TKAGWSPWHTSK*SSADIPVADRT Trigger: TGTCCTATCAGCCACAGGGATATCTGCTGAACTGCATTTGGAAGTGTGCCAGGGACTCCAGCCAGCCTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR GCA 72 bp | GCTGGCCTTGAACTCTTGTTCTGCCTCCAGGACCATTaGCTGGATGATGCAATCCTTACAGCTTGTGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: AGLELLFCLQDH*LDDAILTACDQ Trigger: CTGGTCACAAGCTGTAAGGATTGCATCATCCAGGCAATGGTCCTGGAGGCAGAACAAGAGTTCAAGGCCAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | CTCTGGGCGCAGAAGTGTCCCCAGATGATATTCAGATaGGAGCTCTCTCAATTGCCCCCTTGTGGTCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: LWAQKCPQMIFR*ELSQLPPCGPL Trigger: TAATGGACCACAAGGGGGCAATTGAGAGAGCTCCCATCTGAATATCATCTGGGGACACTTCTGCGCCCAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | CCTCTCACCCCAGGTCCCTCACAGGATATTAGAGGCTaGCTATCTCAAGATGGAGAAAATCCACAGCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PLTPGPSQDIRG*LSQDGENPQLQ Trigger: CTGGAGCTGTGGATTTTCTCCATCTTGAGATAGCCAGCCTCTAATATCCTGTGAGGGACCTGGGGTGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | CAAAGTCAGCCAGAGACAAAGGCTGGCTGGAGTCCCTaGCACACTTCCAAATGCAGTTCAGCAGATATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: QSQPETKAGWSP*HTSKCSSADIP Trigger: AGGGATATCTGCTGAACTGCATTTGGAAGTGTGCCAGGGACTCCAGCCAGCCTTTGTCTCTGGCTGACTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | TTGGCAGTTCAAAGTCAGCCAGAGACAAAGGCTGGCTaGAGTCCCTGGCACACTTCCAAATGCAGTTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LAVQSQPETKAG*SPWHTSKCSSA Trigger: TGCTGAACTGCATTTGGAAGTGTGCCAGGGACTCCAGCCAGCCTTTGTCTCTGGCTGACTTTGAACTGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | GTACTTGGCTTCACTGGCAGGAACTGTACTTGGTCTTaGAAGGAGTCCAGGTCACATGCTACATCCCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: VLGFTGRNCTWS*KESRSHATSHP Trigger: AGGGTGGGATGTAGCATGTGACCTGGACTCCTTCCAAGACCAAGTACAGTTCCTGCCAGTGAAGCCAAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCACAGCCCATGGTCTTCCTAAGGAAGACTTGCCAGGCACTGATACATCTGGAACTGTACTTGGTCTaGGAAGGAGTCCAGGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: GAQPMVFLRKTCQALIHLELYLV*EGVQVT Trigger: TGTGACCTGGACTCCTTCCAAGACCAAGTACAGTTC...CAGATGTATCAGTGCCTGGCAAGTCTTCCTTAGGAAGACCATGGGCTGTGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR-3UTR CAA 90 bp | CGGGGTCAGGATGCTTGGTGGGAGCTCTGGCCTCAAAGAGAAGACATACTGGGCAATGAATTCAGAAGATaGGTGCCCACTATGGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: RGQDAWWELWPQREDILGNEFRR*VPTMVI Trigger: GATCACCATAGTGGGCACCAATCTTCTGAATTCATT...GCCCAGTATGTCTTCTCTTTGAGGCCAGAGCTCCCACCAAGCATCCTGACCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR GCA 72 bp | CACCAGACACAGAACACCAAAGCCCCTCTATCTGTTTaGTCTCTCCAGCCTGTGGATGTAGAGAAATGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: HQTQNTKAPLSV*SLQPVDVEKWW Trigger: CCACCATTTCTCTACATCCACAGGCTGGAGAGAGCAAACAGATAGAGGGGCTTTGGTGTTCTGTGTCTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | GGTCAGGATTTAAGGTCAGCTTCAGCTACAGTGAATTaGAGGCTAGCCTGGGCTATAGGAGACCCAGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GQDLRSASATVN*RLAWAIGDPVS Trigger: TGAGACTGGGTCTCCTATAGCCCAGGCTAGCCTCCAATTCACTGTAGCTGAAGCTGACCTTAAATCCTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCAACTCTCAGAGTCCAGGCTCTGAGAGTAAGGCTTTGTCTCTATGTTCCCAGCTTCCTAAGGAAGACTaGCCAGGCACTGATACATCT | + |
|
Preference number: 3 (lower is better) Translates to: PNSQSPGSESKALSLCSQLPKED*PGTDTS Trigger: AGATGTATCAGTGCCTGGCAAGTCTTCCTTAGGAAG...CTGGGAACATAGAGACAAAGCCTTACTCTCAGAGCCTGGACTCTGAGAGTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | GACACCGAGGTCTCTATCCATCCACAAAAGAGAAGGTaGCATCCACAATGTACTTGGCTTCACTGGCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: DTEVSIHPQKRR*HPQCTWLHWQE Trigger: TTCCTGCCAGTGAAGCCAAGTACATTGTGGATGCCACCTTCTCTTTTGTGGATGGATAGAGACCTCGGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | AGGTCAGCTTCAGCTACAGTGAATTGGAGGCTAGCCTaGGCTATAGGAGACCCAGTCTCACAAACAACAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RSASATVNWRLA*AIGDPVSQTTR Trigger: TCTTGTTGTTTGTGAGACTGGGTCTCCTATAGCCCAGGCTAGCCTCCAATTCACTGTAGCTGAAGCTGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR GCA 72 bp | ATTTTAGCTGAAGCCATCAATTTAACTTCAAAGATCTaGCCCCAAAGCAGGCTCAGGCGGAGGCTTAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: ILAEAINLTSKI*PQSRLRRRLNP Trigger: AGGGTTAAGCCTCCGCCTGAGCCTGCTTTGGGGGCAGATCTTTGAAGTTAAATTGATGGCTTCAGCTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CCA 72 bp | CATCCACAAAAGAGAAGGTGGCATCCACAATGTACTTaGCTTCACTGGCAGGAACTGTACTTGGTCTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HPQKRRWHPQCT*LHWQELYLVLE Trigger: TTCCAAGACCAAGTACAGTTCCTGCCAGTGAAGCCAAGTACATTGTGGATGCCACCTTCTCTTTTGTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR TCA 72 bp | ACATGGATTAGAGCTAATCTACTTTATGATACTTTGTaGGGCCCCAGCCACAGGGCAAGCTTCAACTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TWIRANLLYDTL*GPSHRASFNSL Trigger: CAAGGAGTTGAAGCTTGCCCTGTGGCTGGGGCCTCACAAAGTATCATAAAGTAGATTAGCTCTAATCCATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070173.9 ENSMUST00000211715.2 |
||
| 3UTR TCA 72 bp | AGACCCAGTCTCACAAACAACAAGAAGATCCAGGGATaGGAAGTCACTTCAGAATTCAGATCCATCAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: RPSLTNNKKIQG*EVTSEFRSINP Trigger: GGGATTGATGGATCTGAATTCTGAAGTGACTTCTCATCCCTGGATCTTCTTGTTGTTTGTGAGACTGGGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR TCA 72 bp | GGTGTTGGTCTGAAAGCTACATCTCCACACCTAAGTTaGTATCATAAATCAGACACTTTCTCAGACTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GVGLKATSPHLS*YHKSDTFSDWL Trigger: CAGCCAGTCTGAGAAAGTGTCTGATTTATGATATCAACTTAGGTGTGGAGATGTAGCTTTCAGACCAACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR TCA 72 bp | AGCTTGAGAAGTACAGGAGAGAGTTCCCATTTTAGCTaGAGCCATCAATTTAACTTCAAAGATCTGCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SLRSTGESSHFS*SHQFNFKDLPP Trigger: TGGGGGCAGATCTTTGAAGTTAAATTGATGGCTTCAGCTAAAATGGGAACTCTCTCCTGTACTTCTCAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGGCCCCCTGTGGGGGCACCCAGGAAGCGCTCCCTAAGGTGTGGCTTCAGCACATGCACTACGAGCTaGGGGCTGTGCTTCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ARPPVGAPRKRSLRCGFSTCTTS*GLCFSH Trigger: GTGGGAGAAGCACAGCCCCCAGCTCGTAGTGCATGT...GCTGAAGCCACACCTTAGGGAGCGCTTCCTGGGTGCCCCCACAGGGGGCCTGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGGCCCCCTGTGGGGGCACCCAGGAAGCGCTCCCTAAGGTGTGGCTTCAGCGTAGGGCTTACCCAGTaGGGGCACGTGGACAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ARPPVGAPRKRSLRCGFSVGLTQ*GHVDKS Trigger: GCTTTTGTCCACGTGCCCCCACTGGGTAAGCCCTAC...GCTGAAGCCACACCTTAGGGAGCGCTTCCTGGGTGCCCCCACAGGGGGCCTGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| CDS-3UTR CCA 90 bp | CGGGGTCAGGATGCTTGGTGGGAGCTCTGGCCTCAAAGAGAAGACATACTGGGCCCCAGTGGGGGCACGTaGACAAAAGCGGAGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RGQDAWWELWPQREDILGPSGGT*TKAERP Trigger: CGGCCGCTCCGCTTTTGTCCACGTGCCCCCACTGGG...GCCCAGTATGTCTTCTCTTTGAGGCCAGAGCTCCCACCAAGCATCCTGACCCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| CDS-3UTR GCA 90 bp | GCATGTGTGCAGACCACTAGCCCTGGCCTCTGGGCGCAGAAGTGTCCCCAGATGGGGATCTCGTACACATaGAGGTCCACGCTGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ACVQTTSPGLWAQKCPQMGISYT*RSTLSP Trigger: CGGGGACAGCGTGGACCTGCATGTGTACGAGATCCC...CATCTGGGGACACTTCTGCGCCCAGAGGCCAGGGCTAGTGGTCTGCACACATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070173.9 ENSMUST00000211715.2 |
||
| 3UTR CAA 72 bp | GCTGGAGGCGCTCTCCTAGCATACAGCAAGGTCACCTaGGGGGCGCAGGCACAAGCATCCTGTGCACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGGALLAYSKVT*GAQAQASCAHS Trigger: GCTGTGTGCACAGGATGCTTGTGCCTGCGCCCCCAAGGTGACCTTGCTGTATGCTAGGAGAGCGCCTCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| CDS-3UTR TCA 90 bp | GTCACATGCTACATCCCACCCTTCCTGAGAGCCCCTCCTCCTGGCTTGGCAGTTCGGCGTCCATGTCGATaGTGGAGTCGATGCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VTCYIPPFLRAPPPGLAVRRPCR*WSRCSR Trigger: CCGAGAGCATCGACTCCATCATCGACATGGACGCCG...AACTGCCAAGCCAGGAGGAGGGGCTCTCAGGAAGGGTGGGATGTAGCATGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCCTCCAATTCTTGCAGTTTGGCCCTCCACGTGGCCTCAGGAAACACTGGACCAGCGTCACTGTGGTaGCCATGCCCGACACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PASNSCSLALHVASGNTGPASLW*PCPTPQ Trigger: TTGGGGTGTCGGGCATGGCCACCACAGTGACGCTGG...TCCAGTGTTTCCTGAGGCCACGTGGAGGGCCAAACTGCAAGAATTGGAGGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CAA 72 bp | TGGCTTCAGCTGCCCTGGGCGGAGCCAACCCAGGCTTaGAGGGAAAAGAGCCTGGTGCCAACCAGCATTAGT | + |
|
Preference number: 4 (lower is better) Translates to: WLQLPWAEPTQA*REKSLVPTSIS Trigger: ACTAATGCTGGTTGGCACCAGGCTCTTTTCCCTCAAAGCCTGGGTTGGCTCCGCCCAGGGCAGCTGAAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| CDS-3UTR TCA 90 bp | CCCAACTCTCAGAGTCCAGGCTCTGAGAGTAAGGCTTTGTCTCTATGTTCCCAGTCCTCCACGCAGCACTaGGAGCCGGGGCAGAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: PNSQSPGSESKALSLCSQSSTQH*EPGQNR Trigger: CCGGTTCTGCCCCGGCTCTCAGTGCTGCGTGGAGGA...CTGGGAACATAGAGACAAAGCCTTACTCTCAGAGCCTGGACTCTGAGAGTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCCAATTCTTGCAGTTTGGCCCTCCACGTGGCCTCAGGAAACACTGGAGGGGATCTCGTACACATaGAGGTCCACGCTGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LPPILAVWPSTWPQETLEGISYT*RSTLSP Trigger: CGGGGACAGCGTGGACCTGCATGTGTACGAGATCCC...CTCCAGTGTTTCCTGAGGCCACGTGGAGGGCCAAACTGCAAGAATTGGAGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| CDS-3UTR CCA 90 bp | GGCAACCAGGTCCCAAGTGGCTTTGGCGGGGACCATCTAGGGTTTAAGACATGGAGCTTCTCCAGCTCCTaGACAGCGATCCAGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GNQVPSGFGGDHLGFKTWSFSSS*TAIQLA Trigger: TGCCAGCTGGATCGCTGTCCAGGAGCTGGAGAAGCT...CCATGTCTTAAACCCTAGATGGTCCCCGCCAAAGCCACTTGGGACCTGGTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070173.9 ENSMUST00000211715.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGCGGGAGGCATTTCACCAGACACAGAACACCAAAGCCCCTCTATCTGTTTTTTCCAGCGTCACTGTaGTGGCCATGCCCGACACCC | + |
|
Preference number: 4 (lower is better) Translates to: GGGRHFTRHRTPKPLYLFFPASL*WPCPTP Trigger: GGGTGTCGGGCATGGCCACCACAGTGACGCTGGAAA...AAACAGATAGAGGGGCTTTGGTGTTCTGTGTCTGGTGAAATGCCTCCCGCCCCC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CAA 72 bp | CTGGCCTCTAACTTGGAGTGTAGGGGGAGGCTGGCCTaGAACTCTTGTTCTGCCTCCAGGACCATTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LASNLECRGRLA*NSCSASRTIAW Trigger: CCAGGCAATGGTCCTGGAGGCAGAACAAGAGTTCAAGGCCAGCCTCCCCCTACACTCCAAGTTAGAGGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| CDS-3UTR TCA 90 bp | CCCAACTCTCAGAGTCCAGGCTCTGAGAGTAAGGCTTTGTCTCTATGTTCCCAGCCCACAGTGCTGGGATaGGCCTCTGCACCGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PNSQSPGSESKALSLCSQPTVLG*ASAPSG Trigger: ACCAGACGGTGCAGAGGCTCATCCCAGCACTGTGGG...CTGGGAACATAGAGACAAAGCCTTACTCTCAGAGCCTGGACTCTGAGAGTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCCCAGATGATATTCAGATGGGAGCTCTCTCAATTGCCCCCTTGTGGTCCAACGAGCTGGGGGCTGTaGTTCTCCCACAGTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CPQMIFRWELSQLPPCGPTSWGL*FSHSAG Trigger: CCCAGCACTGTGGGAGAAGCACAGCCCCCAGCTCGT...TGGACCACAAGGGGGCAATTGAGAGAGCTCCCATCTGAATATCATCTGGGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| CDS-3UTR CCA 90 bp | GCCCAGGGCACAGCATGCTGGTGTTGGTCTGAAAGCTACATCTCCACACCTAAGAGCTTCTCCAGCTCCTaGACAGCGATCCAGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQGTACWCWSESYISTPKSFSSS*TAIQLA Trigger: TGCCAGCTGGATCGCTGTCCAGGAGCTGGAGAAGCT...CTTAGGTGTGGAGATGTAGCTTTCAGACCAACACCAGCATGCTGTGCCCTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| CDS-3UTR CCA 90 bp | AGGCCCCAGCCACAGGGCAAGCTTCAACTCCTTGTCCATACACCTGAAAATGCAGCACCCAGGTGTACATaGCTGTCAGAGCTGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPQPQGKLQLLVHTPENAAPRCT*LSELAA Trigger: TGCCGCCAGCTCTGACAGCCATGTACACCTGGGTGC...TGCATTTTCAGGTGTATGGACAAGGAGTTGAAGCTTGCCCTGTGGCTGGGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211715.2 |
||
| 3UTR CAA 72 bp | CAGGCACTGATACATCTGAAGCAGGACTGCCACACGTaGGAGGGCCAGCCTGAGCTACAGAGGTCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QALIHLKQDCHT*EGQPELQRSGR Trigger: TCTACCTGACCTCTGTAGCTCAGGCTGGCCCTCCAACGTGTGGCAGTCCTGCTTCAGATGTATCAGTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CAA 72 bp | GCCCACTATGGTGATCCTGCCTCCAATTCTTGCAGTTaGGCCCTCCACGTGGCCTCAGGAAACACTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AHYGDPASNSCS*ALHVASGNTGV Trigger: CACTCCAGTGTTTCCTGAGGCCACGTGGAGGGCCAAACTGCAAGAATTGGAGGCAGGATCACCATAGTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCCAATTCTTGCAGTTTGGCCCTCCACGTGGCCTCAGGAAACACTGGAGAGTCACACAGATACCTaGCAGCATCCTGGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LPPILAVWPSTWPQETLESHTDT*QHPGRW Trigger: CCATCTCCCAGGATGCTGGCAGGTATCTGTGTGACT...CTCCAGTGTTTCCTGAGGCCACGTGGAGGGCCAAACTGCAAGAATTGGAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| CDS-3UTR CCA 90 bp | AGGCCCCAGCCACAGGGCAAGCTTCAACTCCTTGTCCATACACCTGAAAATGCACGTCCAGTCCCAGTGTaGTCACCCTTTTGCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: RPQPQGKLQLLVHTPENARPVPV*SPFCTR Trigger: CCGTGTGCAAAAGGGTGACCACACTGGGACTGGACG...TGCATTTTCAGGTGTATGGACAAGGAGTTGAAGCTTGCCCTGTGGCTGGGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CAA 72 bp | CCCAACTCTCAGAGTCCAGGCTCTGAGAGTAAGGCTTaGTCTCTATGTTCCCAGAGGGGACTCTGGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PNSQSPGSESKA*SLCSQRGLWAQ Trigger: CTGAGCCCAGAGTCCCCTCTGGGAACATAGAGACAAAGCCTTACTCTCAGAGCCTGGACTCTGAGAGTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| CDS-3UTR GCA 90 bp | GGCAACCAGGTCCCAAGTGGCTTTGGCGGGGACCATCTAGGGTTTAAGACATGGCTGGCATTCACAGTATaGTCCCCAAAAGGGCCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GNQVPSGFGGDHLGFKTWLAFTV*SPKGPN Trigger: ATTCGGCCCTTTTGGGGAGCATACTGTGAATGCCAG...CCATGTCTTAAACCCTAGATGGTCCCCGCCAAAGCCACTTGGGACCTGGTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070173.9 ENSMUST00000211715.2 |
||
| 3UTR CAA 72 bp | GGGTCAGGATTTAAGGTCAGCTTCAGCTACAGTGAATaGGAGGCTAGCCTGGGCTATAGGAGACCCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSGFKVSFSYSE*EASLGYRRPSL Trigger: GAGACTGGGTCTCCTATAGCCCAGGCTAGCCTCCAATTCACTGTAGCTGAAGCTGACCTTAAATCCTGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGCCACAGGGCAAGCTTCAACTCCTTGTCCATACACCTGAAAATGCAGACTCTGGCATTCACAGTATaGTCCCCAAAAGGGCCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSHRASFNSLSIHLKMQTLAFTV*SPKGPN Trigger: ATTCGGCCCTTTTGGGGAGCATACTGTGAATGCCAG...AGTCTGCATTTTCAGGTGTATGGACAAGGAGTTGAAGCTTGCCCTGTGGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070173.9 ENSMUST00000211715.2 |
||
| 3UTR CAA 72 bp | AAAGAGGCCGCCCTCCCCAGGAGAAAGGAAAGACACTaGTTGGTTAGGCCTGAAGTCTTAACAATGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: KEAALPRRKERH*LVRPEVLTMGT Trigger: TGTTCCCATTGTTAAGACTTCAGGCCTAACCAACAAGTGTCTTTCCTTTCTCCTGGGGAGGGCGGCCTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
||
| 3UTR CAA 72 bp | CCACAATGTACTTGGCTTCACTGGCAGGAACTGTACTaGGTCTTGGAAGGAGTCCAGGTCACATGCTACATC | + |
|
Preference number: 4 (lower is better) Translates to: PQCTWLHWQELY*VLEGVQVTCYI Trigger: GATGTAGCATGTGACCTGGACTCCTTCCAAGACCAAGTACAGTTCCTGCCAGTGAAGCCAAGTACATTGTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR CAA 72 bp | TCACCAGACACAGAACACCAAAGCCCCTCTATCTGTTaGCTCTCTCCAGCCTGTGGATGTAGAGAAATGGTG | + |
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Preference number: 4 (lower is better) Translates to: SPDTEHQSPSIC*LSPACGCREMV Trigger: CACCATTTCTCTACATCCACAGGCTGGAGAGAGCAAACAGATAGAGGGGCTTTGGTGTTCTGTGTCTGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| 3UTR CAA 72 bp | GTGGCAACTCAGGATATAGCTTTTCAAACCCAAACATaGACTTGGGTTCATTCCCCTACTGCTGCATATAAA | + |
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Preference number: 4 (lower is better) Translates to: VATQDIAFQTQT*TWVHSPTAAYK Trigger: TTTATATGCAGCAGTAGGGGAATGAACCCAAGTCAATGTTTGGGTTTGAAAAGCTATATCCTGAGTTGCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070173.9 |
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| CDS CCA 90 bp | ATGAGTCAGGATGGCCCCTCTCTCGGCACCGCACCCAGGTGTACATaGCTGTCAGAGCTGGCGGCAACAGCTGATGTCTCCCTCGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: MSQDGPSLGTAPRCT*LSELAATADVSLGL Trigger: CAAGCCGAGGGAGACATCAGCTGTTGCCGCCAGCTCTGACAGCCATGTACACCTGGGTGCGGTGCCGAGAGAGGGGCCATCCTGACTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211715.2 |
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| CDS TCA 90 bp | CCAGTCCCAGTGTGGTCACCCTTTTGCACACGGCGTCCATGTCGATaGTGGAGTCGATGCTCTCGGGACCATCCTCCACGCAGCACTGAG | + |
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Preference number: 5 (lower is better) Translates to: PVPVWSPFCTRRPCR*WSRCSRDHPPRSTE Trigger: CTCAGTGCTGCGTGGAGGATGGTCCCGAGAGCATCGACTCCATCATCGACATGGACGCCGTGTGCAAAAGGGTGACCACACTGGGACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070173.9 ENSMUST00000209768.2 ENSMUST00000210307.2 |
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| CDS GCA 90 bp | AGCTTCTCCAGCTCCTGGACAGCGATCCAGCTGGCATTCACAGTATaGTCCCCAAAAGGGCCGAATCCGGTTACCACTACCGCCTTCCGC | + |
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Preference number: 5 (lower is better) Translates to: SFSSSWTAIQLAFTV*SPKGPNPVTTTAFR Trigger: GCGGAAGGCGGTAGTGGTAACCGGATTCGGCCCTTTTGGGGAGCATACTGTGAATGCCAGCTGGATCGCTGTCCAGGAGCTGGAGAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070173.9 ENSMUST00000211715.2 |
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| CDS GCA 90 bp | ACATGCACTACGAGCTGGACAGCGATCCAGCTGGCATTCACAGTATaGTCCCCAAAAGGGCCGAATCCGGTTACCACTACCGCCTTCCGC | + |
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Preference number: 5 (lower is better) Translates to: TCTTSWTAIQLAFTV*SPKGPNPVTTTAFR Trigger: GCGGAAGGCGGTAGTGGTAACCGGATTCGGCCCTTTTGGGGAGCATACTGTGAATGCCAGCTGGATCGCTGTCCAGCTCGTAGTGCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209768.2 |
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| CDS GCA 90 bp | AACCCTTGTTGTGCCCACATTTTTCCAGCGTCACTGTGGTGGCCATaGCCGACACCCCAACATGCACTACGAGCTGGACAGCGATCCAGC | + |
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Preference number: 5 (lower is better) Translates to: NPCCAHIFPASLWWP*PTPQHALRAGQRSS Trigger: GCTGGATCGCTGTCCAGCTCGTAGTGCATGTTGGGGTGTCGGGCATGGCCACCACAGTGACGCTGGAAAAATGTGGGCACAACAAGGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209768.2 |
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| CDS CCA 90 bp | CTTTGTAACCCTTGTTGTGCCCACATTTTTCCAGCGTCACTGTGGTaGCCATGCCCGACACCCCAACATGCACTACGAGCTGGACAGCGA | + |
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Preference number: 5 (lower is better) Translates to: LCNPCCAHIFPASLW*PCPTPQHALRAGQR Trigger: TCGCTGTCCAGCTCGTAGTGCATGTTGGGGTGTCGGGCATGGCCACCACAGTGACGCTGGAAAAATGTGGGCACAACAAGGGTTACAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209768.2 |
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| CDS CCA 90 bp | GTCCTTTGTAACCCTTGTTGTGCCCACATTTTTCCAGCGTCACTGTaGTGGCCATGCCCGACACCCCAACATGCACTACGAGCTGGACAG | + |
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Preference number: 5 (lower is better) Translates to: VLCNPCCAHIFPASL*WPCPTPQHALRAGQ Trigger: CTGTCCAGCTCGTAGTGCATGTTGGGGTGTCGGGCATGGCCACCACAGTGACGCTGGAAAAATGTGGGCACAACAAGGGTTACAAAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209768.2 |
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| CDS CCA 72 bp | GATGGCCCCTCTCTCGGCACCGCACCCAGGTGTACATaGCTGTCAGAGCTGGCGGCAACAGCTGATGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: DGPSLGTAPRCT*LSELAATADVS Trigger: GGAGACATCAGCTGTTGCCGCCAGCTCTGACAGCCATGTACACCTGGGTGCGGTGCCGAGAGAGGGGCCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211715.2 |
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| CDS TCA 72 bp | GAGTCGATGCTCTCGGGACCATCCTCCACGCAGCACTaGGAGCCGGGGCAGAACCGGCAATTATCCAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: ESMLSGPSSTQH*EPGQNRQLSSP Trigger: AGGACTGGATAATTGCCGGTTCTGCCCCGGCTCTCAGTGCTGCGTGGAGGATGGTCCCGAGAGCATCGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070173.9 ENSMUST00000209768.2 ENSMUST00000210307.2 |
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| CDS TCA 72 bp | GTGTGGTCACCCTTTTGCACACGGCGTCCATGTCGATaGTGGAGTCGATGCTCTCGGGACCATCCTCCACGC | + |
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Preference number: 6 (lower is better) Translates to: VWSPFCTRRPCR*WSRCSRDHPPR Trigger: GCGTGGAGGATGGTCCCGAGAGCATCGACTCCATCATCGACATGGACGCCGTGTGCAAAAGGGTGACCACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070173.9 ENSMUST00000209768.2 ENSMUST00000210307.2 |
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| CDS GCA 72 bp | CAGAGCTGGCGGCAACAGCTGATGTCTCCCTCGGCTTaGTCCAGGACACCCAGCATCTCCTCGATGATAGCT | + |
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Preference number: 6 (lower is better) Translates to: QSWRQQLMSPSA*SRTPSISSMIA Trigger: AGCTATCATCGAGGAGATGCTGGGTGTCCTGGAGCAAGCCGAGGGAGACATCAGCTGTTGCCGCCAGCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070173.9 ENSMUST00000211715.2 |
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| CDS CAA 90 bp | TGGGAGATGGTAACAGACACGTCCAGTCCCAGTGTGGTCACCCTTTaGCACACGGCGTCCATGTCGATGATGGAGTCGATGCTCTCGGGA | + |
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Preference number: 6 (lower is better) Translates to: WEMVTDTSSPSVVTL*HTASMSMMESMLSG Trigger: TCCCGAGAGCATCGACTCCATCATCGACATGGACGCCGTGTGCAAAAGGGTGACCACACTGGGACTGGACGTGTCTGTTACCATCTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070173.9 ENSMUST00000209768.2 ENSMUST00000210307.2 |
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| CDS TCA 72 bp | AGCGGCCGCGGCCCTGGTAGAGCGATGTATAATACGTaGAGTCACACAGATACCTGCCAGCATCCTGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: SGRGPGRAMYNT*SHTDTCQHPGR Trigger: TCTCCCAGGATGCTGGCAGGTATCTGTGTGACTTCACGTATTATACATCGCTCTACCAGGGCCGCGGCCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070173.9 ENSMUST00000210307.2 |
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| CDS CAA 72 bp | GTAACAGACACGTCCAGTCCCAGTGTGGTCACCCTTTaGCACACGGCGTCCATGTCGATGATGGAGTCGATG | + |
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Preference number: 6 (lower is better) Translates to: VTDTSSPSVVTL*HTASMSMMESM Trigger: CATCGACTCCATCATCGACATGGACGCCGTGTGCAAAAGGGTGACCACACTGGGACTGGACGTGTCTGTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070173.9 ENSMUST00000209768.2 ENSMUST00000210307.2 |
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