Pregenerated sensors for PGP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043445Ensembl transcript IDs: ENSMUST00000053024.8
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACTTGGTGAGCAGGCGAAGTCCTGTGGCCATGAGCATAGCCACTTaGTACAGGGCATGGTGCCAGAAAGGAGTCAGCCAAAAGGAACTT | + |
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Preference number: 1 (lower is better) Translates to: NLVSRRSPVAMSIAT*YRAWCQKGVSQKEL Trigger: AAGTTCCTTTTGGCTGACTCCTTTCTGGCACCATGCCCTGTACCAAGTGGCTATGCTCATGGCCACAGGACTTCGCCTGCTCACCAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR TCA 90 bp | ATGAGGGTCTGCAGTACTGAGCATCTGAAACAGAACAGACAATTGTaGTGTCAAAGAGGCAGAGTAGCGGAGGCTGTCGGGGTTGGCATC | + |
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Preference number: 1 (lower is better) Translates to: MRVCSTEHLKQNRQL*CQRGRVAEAVGVGI Trigger: GATGCCAACCCCGACAGCCTCCGCTACTCTGCCTCTTTGACATCACAATTGTCTGTTCTGTTTCAGATGCTCAGTACTGCAGACCCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR TCA 90 bp | TCTGGGAAACAAGACAATCCTCGGCTAGCACACTGGCTATGCTGCTaGCTGGGACAGGAGATTTCTTTAGTGGGGTTTACCGTTGCGACA | + |
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Preference number: 1 (lower is better) Translates to: SGKQDNPRLAHWLCC*LGQEISLVGFTVAT Trigger: TGTCGCAACGGTAAACCCCACTAAAGAAATCTCCTGTCCCAGTCAGCAGCATAGCCAGTGTGCTAGCCGAGGATTGTCTTGTTTCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR GCA 90 bp | CCTAGGCCAAGTTCACAAAAGACAAGTTTAGTTGGGCTGTTACTGTaGATGAGGGTCTGCAGTACTGAGCATCTGAAACAGAACAGACAA | + |
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Preference number: 1 (lower is better) Translates to: PRPSSQKTSLVGLLL*MRVCSTEHLKQNRQ Trigger: TTGTCTGTTCTGTTTCAGATGCTCAGTACTGCAGACCCTCATGCACAGTAACAGCCCAACTAAACTTGTCTTTTGTGAACTTGGCCTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR CAA 90 bp | CCAAGGATCAGCACCACCAATGTCATAGGCACTACCACAGTCGTGTaGATCTATGGCACCTTCCACTCCCGCCCCTGGCCCGGGAACAGC | + |
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Preference number: 2 (lower is better) Translates to: PRISTTNVIGTTTVV*IYGTFHSRPWPGNS Trigger: GCTGTTCCCGGGCCAGGGGCGGGAGTGGAAGGTGCCATAGATCAACACGACTGTGGTAGTGCCTATGACATTGGTGGTGCTGATCCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTCTCCAGGTTTGTCCAGAGGAGGGTCTCTCTGGCTACGCACCTGCCAAGCCGGGCCTGAGGTTACCTaGATGTTGGGCACATGCTAT | + |
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Preference number: 2 (lower is better) Translates to: GSPGLSRGGSLWLRTCQAGPEVT*MLGTCY Trigger: ATAGCATGTGCCCAACATTCAGGTAACCTCAGGCCC...GGCTTGGCAGGTGCGTAGCCAGAGAGACCCTCCTCTGGACAAACCTGGAGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGTTCTCCAGGTTTGTCCAGAGGAGGGTCTCTCTGGCTACGCACCTGCCAAGGTCTGCTCAGAACACTaGAAGGTCAGGGACTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: QVLQVCPEEGLSGYAPAKVCSEH*KVRDWK Trigger: CTTCCAGTCCCTGACCTTTCAGTGTTCTGAGCAGAC...CTTGGCAGGTGCGTAGCCAGAGAGACCCTCCTCTGGACAAACCTGGAGAACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR CCA 90 bp | AGGATCAGCACCACCAATGTCATAGGCACTACCACAGTCGTGTTGATCTATGGCCCACAGGTGAGGAACTaGGACGCAGTAGCAGGCGCC | + |
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Preference number: 2 (lower is better) Translates to: RISTTNVIGTTTVVLIYGPQVRN*DAVAGA Trigger: GGCGCCTGCTACTGCGTCCCAGTTCCTCACCTGTGG...GCCATAGATCAACACGACTGTGGTAGTGCCTATGACATTGGTGGTGCTGATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGTTCTCCAGGTTTGTCCAGAGGAGGGTCTCTCTGGCTACGCACCTGCCAAGCTACCCAGAGGACTCTaGGAAACAAGACAATCCTCG | + |
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Preference number: 2 (lower is better) Translates to: QVLQVCPEEGLSGYAPAKLPRGL*ETRQSS Trigger: CGAGGATTGTCTTGTTTCCCAGAGTCCTCTGGGTAG...CTTGGCAGGTGCGTAGCCAGAGAGACCCTCCTCTGGACAAACCTGGAGAACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR CAA 90 bp | GAACTTGGTGAGCAGGCGAAGTCCTGTGGCCATGAGCATAGCCACTaGGTACAGGGCATGGTGCCAGAAAGGAGTCAGCCAAAAGGAACT | + |
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Preference number: 2 (lower is better) Translates to: ELGEQAKSCGHEHSH*VQGMVPERSQPKGT Trigger: AGTTCCTTTTGGCTGACTCCTTTCTGGCACCATGCCCTGTACCAAGTGGCTATGCTCATGGCCACAGGACTTCGCCTGCTCACCAAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGACTCTGGGAAACAAGACAATCCTCGGCTAGCACACTGGCTATGCTGCTGGGCTGTTACTGTGCATaGGGGTCTGCAGTACTGAGC | + |
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Preference number: 2 (lower is better) Translates to: RGLWETRQSSASTLAMLLGCYCA*GSAVLS Trigger: GCTCAGTACTGCAGACCCTCATGCACAGTAACAGCC...CAGCAGCATAGCCAGTGTGCTAGCCGAGGATTGTCTTGTTTCCCAGAGTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCATAGCCACTTGGTACAGGGCATGGTGCCAGAAAGGAGTCAGCCAAAAGGAACAACCCAACTGTTCTaGGCTCCCGGGAAAGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: EHSHLVQGMVPERSQPKGTTQLF*APGKAA Trigger: TGCTGCTTTCCCGGGAGCTCAGAACAGTTGGGTTGT...TCCTTTTGGCTGACTCCTTTCTGGCACCATGCCCTGTACCAAGTGGCTATGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTATGCTGCTGACTGGGACAGGAGATTTCTTTAGTGGGGTTTACCGTTGCGGAGGCTGTCGGGGTTaGCATCCAAACCCCAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: LAMLLTGTGDFFSGVYRCGGCRG*HPNPSY Trigger: ATAGCTGGGGTTTGGATGCCAACCCCGACAGCCTCC...GCAACGGTAAACCCCACTAAAGAAATCTCCTGTCCCAGTCAGCAGCATAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGACTCTGGGAAACAAGACAATCCTCGGCTAGCACACTGGCTATGCTGCTGAAAGCAGCATGGTGTTaGGAGCTGCTCAGCAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RGLWETRQSSASTLAMLLKAAWC*ELLSRP Trigger: TGGCCTGCTGAGCAGCTCCCAACACCATGCTGCTTT...CAGCAGCATAGCCAGTGTGCTAGCCGAGGATTGTCTTGTTTCCCAGAGTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTATTGCTCTGAGAACTTGGTGAGCAGGCGAAGTCCTGTGGCCATGAGCATACCCGGGAAAGCAGCATaGTGTTGGGAGCTGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: FYCSENLVSRRSPVAMSIPGKAA*CWELLS Trigger: GCTGAGCAGCTCCCAACACCATGCTGCTTTCCCGGG...TATGCTCATGGCCACAGGACTTCGCCTGCTCACCAAGTTCTCAGAGCAATAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGTTCTCCAGGTTTGTCCAGAGGAGGGTCTCTCTGGCTACGCACCTGCCAAGCAGAACAGACAATTGTaGTGTCAAAGAGGCAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: QVLQVCPEEGLSGYAPAKQNRQL*CQRGRV Trigger: TACTCTGCCTCTTTGACATCACAATTGTCTGTTCTG...CTTGGCAGGTGCGTAGCCAGAGAGACCCTCCTCTGGACAAACCTGGAGAACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGTGTTGGGAGCTGCTCAGCAGGCCACACTTAAGACACCTAGGCCAAGTTCAGAGGGTCTGCAGTACTaGGCATCTGAAACAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: MVLGAAQQATLKTPRPSSEGLQY*ASETEQ Trigger: CTGTTCTGTTTCAGATGCTCAGTACTGCAGACCCTC...TGAACTTGGCCTAGGTGTCTTAAGTGTGGCCTGCTGAGCAGCTCCCAACACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTCTCCAGGTTTGTCCAGAGGAGGGTCTCTCTGGCTACGCACCTGCCAAGCCAAAGACAAGTTTAGTTaGGCTGTTACTGTGCATGAG | + |
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Preference number: 2 (lower is better) Translates to: GSPGLSRGGSLWLRTCQAKDKFS*AVTVHE Trigger: CTCATGCACAGTAACAGCCCAACTAAACTTGTCTTT...GGCTTGGCAGGTGCGTAGCCAGAGAGACCCTCCTCTGGACAAACCTGGAGAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGACTCTGGGAAACAAGACAATCCTCGGCTAGCACACTGGCTATGCTGCTGATGACACACAACCCTTaGCCCATTTCAGTCTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: RGLWETRQSSASTLAMLLMTHNP*PISVSA Trigger: TGCTGAGACTGAAATGGGTCAAGGGTTGTGTGTCAT...CAGCAGCATAGCCAGTGTGCTAGCCGAGGATTGTCTTGTTTCCCAGAGTCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCTTAGAGACTTAACTATCCTCAGGACTGACTCCTGCCTACCCAGAGGACTCGCCCACCTTAGGGCCTaGTCCCTGATTACATTTCAG | + |
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Preference number: 2 (lower is better) Translates to: FLRDLTILRTDSCLPRGLAHLRA*SLITFQ Trigger: CTGAAATGTAATCAGGGATCAGGCCCTAAGGTGGGC...GAGTCCTCTGGGTAGGCAGGAGTCAGTCCTGAGGATAGTTAAGTCTCTAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGTTCTCCAGGTTTGTCCAGAGGAGGGTCTCTCTGGCTACGCACCTGCCAAGATCCAATTTCACACTTaGCAGTGTTGTTCACTAGTT | + |
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Preference number: 2 (lower is better) Translates to: QVLQVCPEEGLSGYAPAKIQFHT*QCCSLV Trigger: AACTAGTGAACAACACTGTCAAGTGTGAAATTGGAT...CTTGGCAGGTGCGTAGCCAGAGAGACCCTCCTCTGGACAAACCTGGAGAACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTAGAAATGTCACACACACACAGGTTCTCCAGGTTTGTCCAGAGGAGGGTAAAGGCCAGAGATGCTaGGAAGCCAACTGGCTAGTA | + |
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Preference number: 2 (lower is better) Translates to: QARNVTHTQVLQVCPEEGKGQRC*EANWLV Trigger: TACTAGCCAGTTGGCTTCTCAGCATCTCTGGCCTTT...ACCCTCCTCTGGACAAACCTGGAGAACCTGTGTGTGTGTGACATTTCTAGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR GCA 90 bp | AGGATCAGCACCACCAATGTCATAGGCACTACCACAGTCGTGTTGATCTATGGCGTTGGGCTGTTACTGTaGATGAGGGTCTGCAGTACT | + |
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Preference number: 2 (lower is better) Translates to: RISTTNVIGTTTVVLIYGVGLLL*MRVCST Trigger: AGTACTGCAGACCCTCATGCACAGTAACAGCCCAAC...GCCATAGATCAACACGACTGTGGTAGTGCCTATGACATTGGTGGTGCTGATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTATTGCTCTGAGAACTTGGTGAGCAGGCGAAGTCCTGTGGCCATGAGCATATGGTACAGGGCATGGTaGCAGAAAGGAGTCAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: FYCSENLVSRRSPVAMSIWYRAW*QKGVSQ Trigger: TTGGCTGACTCCTTTCTGGCACCATGCCCTGTACCA...TATGCTCATGGCCACAGGACTTCGCCTGCTCACCAAGTTCTCAGAGCAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCACTTGGTACAGGGCATGGTGCCAGAAAGGAGTCAGCCAAAAGGAACTTCCGCAGTACTGAGCATCTaGAACAGAACAGACAATTGT | + |
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Preference number: 2 (lower is better) Translates to: SHLVQGMVPERSQPKGTSAVLSI*NRTDNC Trigger: ACAATTGTCTGTTCTGTTTCAGATGCTCAGTACTGC...GGAAGTTCCTTTTGGCTGACTCCTTTCTGGCACCATGCCCTGTACCAAGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR TCA 90 bp | AGGATCAGCACCACCAATGTCATAGGCACTACCACAGTCGTGTTGATCTATGGCTACCTTTTATTGCTCTaGGAACTTGGTGAGCAGGCG | + |
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Preference number: 2 (lower is better) Translates to: RISTTNVIGTTTVVLIYGYLLLL*ELGEQA Trigger: CGCCTGCTCACCAAGTTCTCAGAGCAATAAAAGGTA...GCCATAGATCAACACGACTGTGGTAGTGCCTATGACATTGGTGGTGCTGATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTATTGCTCTGAGAACTTGGTGAGCAGGCGAAGTCCTGTGGCCATGAGCATAAGTAGGTCTTATGGCTaGCCACCAACAAGGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: FYCSENLVSRRSPVAMSISRSYG*PPTRKS Trigger: GGACTTCCTTGTTGGTGGCCAGCCATAAGACCTACT...TATGCTCATGGCCACAGGACTTCGCCTGCTCACCAAGTTCTCAGAGCAATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCATAGCCACTTGGTACAGGGCATGGTGCCAGAAAGGAGTCAGCCAAAAGGATTAGGGCCTGATCCCTaGTTACATTTCAGTAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: EHSHLVQGMVPERSQPKGLGPDP*LHFSKK Trigger: CTTTTTACTGAAATGTAATCAGGGATCAGGCCCTAA...TCCTTTTGGCTGACTCCTTTCTGGCACCATGCCCTGTACCAAGTGGCTATGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR CCA 90 bp | ATCACACAGCAAGACAAGCTAGAAATGTCACACACACACAGGTTCTCCAGGTTTGAGCAGCTTCCGGCATaGATGAATACCTTTTATTGC | + |
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Preference number: 2 (lower is better) Translates to: ITQQDKLEMSHTHRFSRFEQLPA*MNTFYC Trigger: GCAATAAAAGGTATTCATCCATGCCGGAAGCTGCTC...AAACCTGGAGAACCTGTGTGTGTGTGACATTTCTAGCTTGTCTTGCTGTGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR CCA 90 bp | ATCACACAGCAAGACAAGCTAGAAATGTCACACACACACAGGTTCTCCAGGTTTGAACAGCTTCAGGCATaGATAGATATCTTTTATTGC | + |
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Preference number: 2 (lower is better) Translates to: ITQQDKLEMSHTHRFSRFEQLQA*IDIFYC Trigger: GCAATAAAAGATATCTATCCATGCCTGAAGCTGTTC...AAACCTGGAGAACCTGTGTGTGTGTGACATTTCTAGCTTGTCTTGCTGTGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR CCA 72 bp | ATGTCAAAGAGGCAGAGTAGCGGAGGCTGTCGGGGTTaGCATCCAAACCCCAGCTATAGAGCGCTCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: MSKRQSSGGCRG*HPNPSYRALPP Trigger: GGGTGGGAGCGCTCTATAGCTGGGGTTTGGATGCCAACCCCGACAGCCTCCGCTACTCTGCCTCTTTGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR CCA 72 bp | CAATGTCATAGGCACTACCACAGTCGTGTTGATCTATaGCACCTTCCACTCCCGCCCCTGGCCCGGGAACAG | + |
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Preference number: 3 (lower is better) Translates to: QCHRHYHSRVDL*HLPLPPLAREQ Trigger: CTGTTCCCGGGCCAGGGGCGGGAGTGGAAGGTGCCATAGATCAACACGACTGTGGTAGTGCCTATGACATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR TCA 72 bp | AGGGACTGGAAGAGCAGGGGAAAAGGCCAGAGATGCTaGGAAGCCAACTGGCTAGTAGGTCTTATGGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: RDWKSRGKGQRC*EANWLVGLMAG Trigger: GCCAGCCATAAGACCTACTAGCCAGTTGGCTTCTCAGCATCTCTGGCCTTTTCCCCTGCTCTTCCAGTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR CCA 72 bp | ATCCTCAGGACTGACTCCTGCCTACCCAGAGGACTCTaGGAAACAAGACAATCCTCGGCTAGCACACTGGCT | + |
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Preference number: 3 (lower is better) Translates to: ILRTDSCLPRGL*ETRQSSASTLA Trigger: AGCCAGTGTGCTAGCCGAGGATTGTCTTGTTTCCCAGAGTCCTCTGGGTAGGCAGGAGTCAGTCCTGAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR CCA 72 bp | CCTGTGGCCATGAGCATAGCCACTTGGTACAGGGCATaGTGCCAGAAAGGAGTCAGCCAAAAGGAACTTCCC | + |
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Preference number: 3 (lower is better) Translates to: PVAMSIATWYRA*CQKGVSQKELP Trigger: GGGAAGTTCCTTTTGGCTGACTCCTTTCTGGCACCATGCCCTGTACCAAGTGGCTATGCTCATGGCCACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR CCA 72 bp | ACAGGTTCTCCAGGTTTGTCCAGAGGAGGGTCTCTCTaGCTACGCACCTGCCAAGCCTGGTCATTATCCAGA | + |
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Preference number: 3 (lower is better) Translates to: TGSPGLSRGGSL*LRTCQAWSLSR Trigger: TCTGGATAATGACCAGGCTTGGCAGGTGCGTAGCCAGAGAGACCCTCCTCTGGACAAACCTGGAGAACCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR CCA 72 bp | CCACTCCCACCCCTGACCTGGGAGCAGCTTCCGGCATaGATGAATACCTTTTATTGCTCTGAGAACTTGGTG | + |
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Preference number: 3 (lower is better) Translates to: PLPPLTWEQLPA*MNTFYCSENLV Trigger: CACCAAGTTCTCAGAGCAATAAAAGGTATTCATCCATGCCGGAAGCTGCTCCCAGGTCAGGGGTGGGAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR CCA 72 bp | CCACTCCCGCCCCTGGCCCGGGAACAGCTTCAGGCATaGATAGATATCTTTTATTGCTCTGAGAACTTGGTG | + |
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Preference number: 3 (lower is better) Translates to: PLPPLAREQLQA*IDIFYCSENLV Trigger: CACCAAGTTCTCAGAGCAATAAAAGATATCTATCCATGCCTGAAGCTGTTCCCGGGCCAGGGGCGGGAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGTTCTCCAGGTTTGTCCAGAGGAGGGTCTCTCTGGCTACGCACCTGCCAAGGGGAAACCCCAGTTTTaGGTCTCTGTGTCATTAAGA | + |
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Preference number: 3 (lower is better) Translates to: QVLQVCPEEGLSGYAPAKGKPQF*VSVSLR Trigger: TCTTAATGACACAGAGACCAAAAACTGGGGTTTCCC...CTTGGCAGGTGCGTAGCCAGAGAGACCCTCCTCTGGACAAACCTGGAGAACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR CCA 72 bp | TTGATCCATGGCACCATTCCACTCCCACCCCTGACCTaGGAGCAGCTTCCGGCATGGATGAATACCTTTTAT | + |
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Preference number: 3 (lower is better) Translates to: LIHGTIPLPPLT*EQLPAWMNTFY Trigger: ATAAAAGGTATTCATCCATGCCGGAAGCTGCTCCCAGGTCAGGGGTGGGAGTGGAATGGTGCCATGGATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR TCA 72 bp | CAAGACAATCCTCGGCTAGCACACTGGCTATGCTGCTaGCTGGGACAGGAGATTTCTTTAGTGGGGTTTACC | + |
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Preference number: 3 (lower is better) Translates to: QDNPRLAHWLCC*LGQEISLVGFT Trigger: GGTAAACCCCACTAAAGAAATCTCCTGTCCCAGTCAGCAGCATAGCCAGTGTGCTAGCCGAGGATTGTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR GCA 72 bp | TGGGAGCAGCTTCCGGCATGGATGAATACCTTTTATTaGTCTGAGAACTTGGTGAGCAGGCGAAGTCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: WEQLPAWMNTFY*SENLVSRRSPV Trigger: CACAGGACTTCGCCTGCTCACCAAGTTCTCAGAGCAATAAAAGGTATTCATCCATGCCGGAAGCTGCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR CCA 72 bp | ATGCTGAGAAGCCAACTGGCTAGTAGGTCTTATGGCTaGCCACCAACAAGGAAGTCCACCTGTCTACAACAA | + |
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Preference number: 3 (lower is better) Translates to: MLRSQLASRSYG*PPTRKSTCLQQ Trigger: TTGTTGTAGACAGGTGGACTTCCTTGTTGGTGGCCAGCCATAAGACCTACTAGCCAGTTGGCTTCTCAGCAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR TCA 72 bp | CCCTTTTTAACTCTGCCCACCTTAGGGCCTGATCCCTaGTTACATTTCAGTAAAAAGCATGACACACAACCC | + |
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Preference number: 3 (lower is better) Translates to: PFLTLPTLGPDP*LHFSKKHDTQP Trigger: GGGTTGTGTGTCATGCTTTTTACTGAAATGTAATCAGGGATCAGGCCCTAAGGTGGGCAGAGTTAAAAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR TCA 72 bp | AGTTGGGCTGTTACTGTGCATGAGGGTCTGCAGTACTaGGCATCTGAAACAGAACAGACAATTGTGATGTCA | + |
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Preference number: 3 (lower is better) Translates to: SWAVTVHEGLQY*ASETEQTIVMS Trigger: TGACATCACAATTGTCTGTTCTGTTTCAGATGCTCAGTACTGCAGACCCTCATGCACAGTAACAGCCCAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR TCA 72 bp | GATTACATTTCAGTAAAAAGCATGACACACAACCCTTaGCCCATTTCAGTCTCAGCAACAGGGCCTGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: DYISVKSMTHNP*PISVSATGPEV Trigger: AACCTCAGGCCCTGTTGCTGAGACTGAAATGGGTCAAGGGTTGTGTGTCATGCTTTTTACTGAAATGTAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR GCA 72 bp | ACAAGTTTAGTTGGGCTGTTACTGTGCATGAGGGTCTaGAGTACTGAGCATCTGAAACAGAACAGACAATTG | + |
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Preference number: 3 (lower is better) Translates to: TSLVGLLLCMRV*STEHLKQNRQL Trigger: CAATTGTCTGTTCTGTTTCAGATGCTCAGTACTGCAGACCCTCATGCACAGTAACAGCCCAACTAAACTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| 3UTR GCA 72 bp | AGTTCACAAAAGACAAGTTTAGTTGGGCTGTTACTGTaGATGAGGGTCTGCAGTACTGAGCATCTGAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: SSQKTSLVGLLL*MRVCSTEHLKQ Trigger: CTGTTTCAGATGCTCAGTACTGCAGACCCTCATGCACAGTAACAGCCCAACTAAACTTGTCTTTTGTGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCACACAGCAAGACAAGCTAGAAATGTCACACACACACAGGTTCTCCAGGTTTGATCCAATTTCACACTaGACAGTGTTGTTCACTAGT | + |
|
Preference number: 3 (lower is better) Translates to: ITQQDKLEMSHTHRFSRFDPISH*TVLFTS Trigger: ACTAGTGAACAACACTGTCAAGTGTGAAATTGGATC...AAACCTGGAGAACCTGTGTGTGTGTGACATTTCTAGCTTGTCTTGCTGTGTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| 3UTR GCA 72 bp | CCCCCAACGTTTACTTACAAGATTAACTACTGCCTTTaGTTATTAACTTCAGTTAACCTGCAGCCACCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: PPTFTYKINYCL*LLTSVNLQPPN Trigger: GTTAGGTGGCTGCAGGTTAACTGAAGTTAATAAGCAAAGGCAGTAGTTAATCTTGTAAGTAAACGTTGGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTTCTCCAGGTTTGTCCAGAGGAGGGTCTCTCTGGCTACGCACCTGCCAAGCCGATGATGTCCGCCTaGCGCTGGGCGGCCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QVLQVCPEEGLSGYAPAKPMMSA*RWAAIS Trigger: GGAGATGGCCGCCCAGCGCCAGGCGGACATCATCGG...CTTGGCAGGTGCGTAGCCAGAGAGACCCTCCTCTGGACAAACCTGGAGAACCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR CCA 90 bp | GAGCATAGCCACTTGGTACAGGGCATGGTGCCAGAAAGGAGTCAGCCAAAAGGACCAGCACGTAGGCCTTaGGGTCCGGCACGCCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EHSHLVQGMVPERSQPKGPARRP*GPARRP Trigger: TGGCCGGCGTGCCGGACCCCAAGGCCTACGTGCTGG...TCCTTTTGGCTGACTCCTTTCTGGCACCATGCCCTGTACCAAGTGGCTATGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCTGAGAACTTGGTGAGCAGGCGAAGTCCTGTGGCCATGAGCATAGCCACTATGTCCGCCTGGCGCTaGGCGGCCATCTCCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSENLVSRRSPVAMSIATMSAWR*AAISTA Trigger: AGCCGTGGAGATGGCCGCCCAGCGCCAGGCGGACAT...AGTGGCTATGCTCATGGCCACAGGACTTCGCCTGCTCACCAAGTTCTCAGAGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCTCCAGGTTTGTCCAGAGGAGGGTCTCTCTGGCTACGCACCTGCCAAGCCGCAGATAGAGCGCGCTaGAATAGGCCGTGCCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: GSPGLSRGGSLWLRTCQAADRAR*NRPCRT Trigger: TGTTCGGCACGGCCTATTGCAGCGCGCTCTATCTGC...GGCTTGGCAGGTGCGTAGCCAGAGAGACCCTCCTCTGGACAAACCTGGAGAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCTCCAGGTTTGTCCAGAGGAGGGTCTCTCTGGCTACGCACCTGCCAAGCCGCCGGTTGTCCATGTTaGTGCCCACGAGCAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSPGLSRGGSLWLRTCQAAGCPC*CPRADS Trigger: ACTGTCTGCTCGTGGGCACCAACATGGACAACCGGC...GGCTTGGCAGGTGCGTAGCCAGAGAGACCCTCCTCTGGACAAACCTGGAGAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| 3UTR CAA 72 bp | AGCACCACCAATGTCATAGGCACTACCACAGTCGTGTaGATCTATGGCACCTTCCACTCCCGCCCCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: STTNVIGTTTVV*IYGTFHSRPWP Trigger: GGGCCAGGGGCGGGAGTGGAAGGTGCCATAGATCAACACGACTGTGGTAGTGCCTATGACATTGGTGGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| 3UTR CAA 72 bp | CCAACTGTTCTGAGCTCCCGGGAAAGCAGCATGGTGTaGGGAGCTGCTCAGCAGGCCACACTTAAGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: PTVLSSRESSMV*GAAQQATLKTP Trigger: AGGTGTCTTAAGTGTGGCCTGCTGAGCAGCTCCCAACACCATGCTGCTTTCCCGGGAGCTCAGAACAGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR GCA 90 bp | TTTTATTGCTCTGAGAACTTGGTGAGCAGGCGAAGTCCTGTGGCCATGAGCATACTGCTAAGGCCGGGCTaGCCAGCACGTAGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FYCSENLVSRRSPVAMSILLRPG*PARRPW Trigger: CCAAGGCCTACGTGCTGGGCAGCCCGGCCTTAGCAG...TATGCTCATGGCCACAGGACTTCGCCTGCTCACCAAGTTCTCAGAGCAATAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR GCA 90 bp | GAGCATAGCCACTTGGTACAGGGCATGGTGCCAGAAAGGAGTCAGCCAAAAGGAGGTTGTCCATGTTGGTaGCCACGAGCAGACAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: EHSHLVQGMVPERSQPKGGCPCW*PRADSR Trigger: CCGACTGTCTGCTCGTGGGCACCAACATGGACAACC...TCCTTTTGGCTGACTCCTTTCTGGCACCATGCCCTGTACCAAGTGGCTATGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR GCA 90 bp | TTTTATTGCTCTGAGAACTTGGTGAGCAGGCGAAGTCCTGTGGCCATGAGCATATCTCCGCGTAGGCCGTaGGAGTCTTGCTGCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FYCSENLVSRRSPVAMSISPRRP*ESCCCC Trigger: ACAACAGCAGCAAGACTCGCACGGCCTACGCGGAGA...TATGCTCATGGCCACAGGACTTCGCCTGCTCACCAAGTTCTCAGAGCAATAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR GCA 90 bp | ATCACACAGCAAGACAAGCTAGAAATGTCACACACACACAGGTTCTCCAGGTTTAGACAGTCGGGCTGCTaGAGGTACCGCACGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ITQQDKLEMSHTHRFSRFRQSGC*RYRTAL Trigger: CAAGGCCGTGCGGTACCTGCAGCAGCCCGACTGTCT...AAACCTGGAGAACCTGTGTGTGTGTGACATTTCTAGCTTGTCTTGCTGTGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR CCA 90 bp | AGGATCAGCACCACCAATGTCATAGGCACTACCACAGTCGTGTTGATCTATGGCTCTTCAGGCTACAGGTaGAGCCCAGGAGGATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RISTTNVIGTTTVVLIYGSSGYR*SPGGCL Trigger: CAGACATCCTCCTGGGCTCCACCTGTAGCCTGAAGA...GCCATAGATCAACACGACTGTGGTAGTGCCTATGACATTGGTGGTGCTGATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGACTCTGGGAAACAAGACAATCCTCGGCTAGCACACTGGCTATGCTGCTGGCAAGAGGTCGGCAATaGTGTCAACATAGAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGLWETRQSSASTLAMLLARGRQ*CQHRSQ Trigger: CTGACTTCTATGTTGACAGCATTGCCGACCTCTTGC...CAGCAGCATAGCCAGTGTGCTAGCCGAGGATTGTCTTGTTTCCCAGAGTCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR CCA 90 bp | AGCCACTTGGTACAGGGCATGGTGCCAGAAAGGAGTCAGCCAAAAGGAACTTCCTTGATACCATACTCCTaGGACACGCAGTCGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SHLVQGMVPERSQPKGTSLIPYS*DTQSKM Trigger: CATCTTCGACTGCGTGTCCCAGGAGTATGGTATCAA...GGAAGTTCCTTTTGGCTGACTCCTTTCTGGCACCATGCCCTGTACCAAGTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATTGCTCTGAGAACTTGGTGAGCAGGCGAAGTCCTGTGGCCATGAGCATACATGTAGCTGAAGTGTaGGTCGAAGCCCACCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: FYCSENLVSRRSPVAMSIHVAEV*VEAHHY Trigger: GTAGTGGTGGGCTTCGACCCACACTTCAGCTACATG...TATGCTCATGGCCACAGGACTTCGCCTGCTCACCAAGTTCTCAGAGCAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| 3UTR CAA 72 bp | CCGGCATGGATGAATACCTTTTATTGCTCTGAGAACTaGGTGAGCAGGCGAAGTCCTGTGGCCATGAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: PAWMNTFYCSEN*VSRRSPVAMSI Trigger: TATGCTCATGGCCACAGGACTTCGCCTGCTCACCAAGTTCTCAGAGCAATAAAAGGTATTCATCCATGCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR TCA 90 bp | AGGATCAGCACCACCAATGTCATAGGCACTACCACAGTCGTGTTGATCTATGGCATGCAGTCACTTTCCTaGTTGCTCTTCACATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RISTTNVIGTTTVVLIYGMQSLS*LLFTSS Trigger: TGAGGATGTGAAGAGCAATCAGGAAAGTGACTGCAT...GCCATAGATCAACACGACTGTGGTAGTGCCTATGACATTGGTGGTGCTGATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS GCA 90 bp | CGCCGGCCAGGCGTTGGCGCAGATAGAGCGCGCTGCAATAGGCCGTaGCGAACACCTCGAGGCCAGCTTCGGGCCCCACCGGGCCGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RRPGVGADRARCNRP*RTPRGQLRAPPGRR Trigger: TCGGCGGCCCGGTGGGGCCCGAAGCTGGCCTCGAGGTGTTCGGCACGGCCTATTGCAGCGCGCTCTATCTGCGCCAACGCCTGGCCGGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS CCA 90 bp | CCTCCAGCTCGGCTGCTAAGGCCGGGCTGCCCAGCACGTAGGCCTTaGGGTCCGGCACGCCGGCCAGGCGTTGGCGCAGATAGAGCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PPARLLRPGCPARRP*GPARRPGVGADRAR Trigger: GCGCGCTCTATCTGCGCCAACGCCTGGCCGGCGTGCCGGACCCCAAGGCCTACGTGCTGGGCAGCCCGGCCTTAGCAGCCGAGCTGGAGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS TCA 90 bp | TCGGGTTCGAGCGGCACGGCTAGCCAGTCGCTGGGGCCATCGCCGTaGAGCACGTCCGGGCCCACGCCCACGCTAGTGACACCCACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGSSGTASQSLGPSP*STSGPTPTLVTPTA Trigger: GGCCGTGGGTGTCACTAGCGTGGGCGTGGGCCCGGACGTGCTTCACGGCGATGGCCCCAGCGACTGGCTAGCCGTGCCGCTCGAACCCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS GCA 90 bp | TGGGGTCCGGCACGCCGGCCAGGCGTTGGCGCAGATAGAGCGCGCTaGAATAGGCCGTGCCGAACACCTCGAGGCCAGCTTCGGGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WGPARRPGVGADRAR*NRPCRTPRGQLRAP Trigger: TGGGGCCCGAAGCTGGCCTCGAGGTGTTCGGCACGGCCTATTGCAGCGCGCTCTATCTGCGCCAACGCCTGGCCGGCGTGCCGGACCCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS CCA 90 bp | CATCGCAGTCGAACAGCAGCGTGTCCACCTCGGCCAGCAGCAACTTaGCCCGCTCGGCGCTCAGCCGCACGCAGCGGGCTTCGTCGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HRSRTAACPPRPAAT*PARRSAARSGLRRH Trigger: GTGGCGACGAAGCCCGCTGCGTGCGGCTGAGCGCCGAGCGGGCCAAGTTGCTGCTGGCCGAGGTGGACACGCTGCTGTTCGACTGCGATG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS CCA 90 bp | TCGAAGATGAAGCGGCTAGGCTTCCCGATGATGTCCGCCTGGCGCTaGGCGGCCATCTCCACGGCTCGCACCAGACAGCCGGTACCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SKMKRLGFPMMSAWR*AAISTARTRQPVPA Trigger: TGCGGGTACCGGCTGTCTGGTGCGAGCCGTGGAGATGGCCGCCCAGCGCCAGGCGGACATCATCGGGAAGCCTAGCCGCTTCATCTTCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS CCA 90 bp | ACGCAGTCGAAGATGAAGCGGCTAGGCTTCCCGATGATGTCCGCCTaGCGCTGGGCGGCCATCTCCACGGCTCGCACCAGACAGCCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TQSKMKRLGFPMMSA*RWAAISTARTRQPV Trigger: TACCGGCTGTCTGGTGCGAGCCGTGGAGATGGCCGCCCAGCGCCAGGCGGACATCATCGGGAAGCCTAGCCGCTTCATCTTCGACTGCGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS CCA 90 bp | CTGCAGGTACCGCACGGCCTTGGTGAGCTTCATGTAGCTGAAGTGTaGGTCGAAGCCCACCACTACCGCGCGCACGTCGGGTTCGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LQVPHGLGELHVAEV*VEAHHYRAHVGFER Trigger: CCGCTCGAACCCGACGTGCGCGCGGTAGTGGTGGGCTTCGACCCACACTTCAGCTACATGAAGCTCACCAAGGCCGTGCGGTACCTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR CAA 90 bp | GGTTCTCCAGGTTTGTCCAGAGGAGGGTCTCTCTGGCTACGCACCTGCCAAGCCAGCCGGTTGTCCATGTaGGTGCCCACGAGCAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: GSPGLSRGGSLWLRTCQASRLSM*VPTSRQ Trigger: CTGTCTGCTCGTGGGCACCAACATGGACAACCGGCT...GGCTTGGCAGGTGCGTAGCCAGAGAGACCCTCCTCTGGACAAACCTGGAGAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS CCA 90 bp | CGGTCTCCCACCATGACGGTGCGCTCCGGGTTGATACCATACTCCTaGGACACGCAGTCGAAGATGAAGCGGCTAGGCTTCCCGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: RSPTMTVRSGLIPYS*DTQSKMKRLGFPMM Trigger: CATCATCGGGAAGCCTAGCCGCTTCATCTTCGACTGCGTGTCCCAGGAGTATGGTATCAACCCGGAGCGCACCGTCATGGTGGGAGACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTTAGAGACTTAACTATCCTCAGGACTGACTCCTGCCTACCCAGAGGACTCATGAAGCCCAGTCGCTaGCCGCGGGCCCGCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FLRDLTILRTDSCLPRGLMKPSR*PRARRA Trigger: GGCTCTGCGGGCCCGCGGCAAGCGACTGGGCTTCAT...GAGTCCTCTGGGTAGGCAGGAGTCAGTCCTGAGGATAGTTAAGTCTCTAAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR CAA 90 bp | CACCATTCCACTCCCACCCCTGACCTGGGAGCAGCTTCCGGCATGGATGAATACGTCTTGCTGCTGTTGTaGGTGATGAAGCCCAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: HHSTPTPDLGAASGMDEYVLLLL*VMKPSR Trigger: GCGACTGGGCTTCATCACCAACAACAGCAGCAAGAC...GTATTCATCCATGCCGGAAGCTGCTCCCAGGTCAGGGGTGGGAGTGGAATGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCTATGCTGCTGACTGGGACAGGAGATTTCTTTAGTGGGGTTTACCGTTGCTCTAGCGGGAGCCGGTaGTCCATGTTGGTGCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: LAMLLTGTGDFFSGVYRCSSGSR*SMLVPT Trigger: CGTGGGCACCAACATGGACAACCGGCTCCCGCTAGA...GCAACGGTAAACCCCACTAAAGAAATCTCCTGTCCCAGTCAGCAGCATAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR CAA 90 bp | ATCACACAGCAAGACAAGCTAGAAATGTCACACACACACAGGTTCTCCAGGTTTCACGCCGGCCAGGCGTaGGCGCAGATAGAGCGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: ITQQDKLEMSHTHRFSRFHAGQA*AQIERA Trigger: AGCGCGCTCTATCTGCGCCAACGCCTGGCCGGCGTG...AAACCTGGAGAACCTGTGTGTGTGTGACATTTCTAGCTTGTCTTGCTGTGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS-3UTR CAA 90 bp | TTTTATTGCTCTGAGAACTTGGTGAGCAGGCGAAGTCCTGTGGCCATGAGCATAACGGTGCGCTCCGGGTaGATACCATACTCCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FYCSENLVSRRSPVAMSITVRSG*IPYSWD Trigger: GTCCCAGGAGTATGGTATCAACCCGGAGCGCACCGT...TATGCTCATGGCCACAGGACTTCGCCTGCTCACCAAGTTCTCAGAGCAATAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS CCA 72 bp | CGGCTGCTAAGGCCGGGCTGCCCAGCACGTAGGCCTTaGGGTCCGGCACGCCGGCCAGGCGTTGGCGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: RLLRPGCPARRP*GPARRPGVGAD Trigger: ATCTGCGCCAACGCCTGGCCGGCGTGCCGGACCCCAAGGCCTACGTGCTGGGCAGCCCGGCCTTAGCAGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS CAA 90 bp | GCCGTGCGAGTCTTGCTGCTGTTGTTGGTGATGAAGCCCAGTCGCTaGCCGCGGGCCCGCAGAGCCCGCAGAGTCTCCGGCGCGCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AVRVLLLLLVMKPSR*PRARRARRVSGAPG Trigger: GCCGGGCGCGCCGGAGACTCTGCGGGCTCTGCGGGCCCGCGGCAAGCGACTGGGCTTCATCACCAACAACAGCAGCAAGACTCGCACGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS TCA 72 bp | AGCGGCACGGCTAGCCAGTCGCTGGGGCCATCGCCGTaGAGCACGTCCGGGCCCACGCCCACGCTAGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: SGTASQSLGPSP*STSGPTPTLVT Trigger: TGTCACTAGCGTGGGCGTGGGCCCGGACGTGCTTCACGGCGATGGCCCCAGCGACTGGCTAGCCGTGCCGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS CCA 72 bp | CGAACAGCAGCGTGTCCACCTCGGCCAGCAGCAACTTaGCCCGCTCGGCGCTCAGCCGCACGCAGCGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RTAACPPRPAAT*PARRSAARSGL Trigger: AAGCCCGCTGCGTGCGGCTGAGCGCCGAGCGGGCCAAGTTGCTGCTGGCCGAGGTGGACACGCTGCTGTTCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS CAA 72 bp | TCGAACAGCAGCGTGTCCACCTCGGCCAGCAGCAACTaGGCCCGCTCGGCGCTCAGCCGCACGCAGCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SNSSVSTSASSN*ARSALSRTQRA Trigger: AGCCCGCTGCGTGCGGCTGAGCGCCGAGCGGGCCAAGTTGCTGCTGGCCGAGGTGGACACGCTGCTGTTCGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS CAA 72 bp | CACGTAGGCCTTGGGGTCCGGCACGCCGGCCAGGCGTaGGCGCAGATAGAGCGCGCTGCAATAGGCCGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: HVGLGVRHAGQA*AQIERAAIGRA Trigger: GGCACGGCCTATTGCAGCGCGCTCTATCTGCGCCAACGCCTGGCCGGCGTGCCGGACCCCAAGGCCTACGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS CAA 90 bp | CCATCGCAGTCGAACAGCAGCGTGTCCACCTCGGCCAGCAGCAACTaGGCCCGCTCGGCGCTCAGCCGCACGCAGCGGGCTTCGTCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PSQSNSSVSTSASSN*ARSALSRTQRASSP Trigger: TGGCGACGAAGCCCGCTGCGTGCGGCTGAGCGCCGAGCGGGCCAAGTTGCTGCTGGCCGAGGTGGACACGCTGCTGTTCGACTGCGATGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS CAA 90 bp | GCTGCCCAGCACGTAGGCCTTGGGGTCCGGCACGCCGGCCAGGCGTaGGCGCAGATAGAGCGCGCTGCAATAGGCCGTGCCGAACACCTC | + |
|
Preference number: 6 (lower is better) Translates to: AAQHVGLGVRHAGQA*AQIERAAIGRAEHL Trigger: GAGGTGTTCGGCACGGCCTATTGCAGCGCGCTCTATCTGCGCCAACGCCTGGCCGGCGTGCCGGACCCCAAGGCCTACGTGCTGGGCAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS CCA 72 bp | AAGCGGCTAGGCTTCCCGATGATGTCCGCCTGGCGCTaGGCGGCCATCTCCACGGCTCGCACCAGACAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: KRLGFPMMSAWR*AAISTARTRQP Trigger: CGGCTGTCTGGTGCGAGCCGTGGAGATGGCCGCCCAGCGCCAGGCGGACATCATCGGGAAGCCTAGCCGCTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS GCA 72 bp | GCACGCCGGCCAGGCGTTGGCGCAGATAGAGCGCGCTaGAATAGGCCGTGCCGAACACCTCGAGGCCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ARRPGVGADRAR*NRPCRTPRGQL Trigger: AAGCTGGCCTCGAGGTGTTCGGCACGGCCTATTGCAGCGCGCTCTATCTGCGCCAACGCCTGGCCGGCGTGC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS CAA 72 bp | GTCTTGCTGCTGTTGTTGGTGATGAAGCCCAGTCGCTaGCCGCGGGCCCGCAGAGCCCGCAGAGTCTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: VLLLLLVMKPSR*PRARRARRVSG Trigger: GCCGGAGACTCTGCGGGCTCTGCGGGCCCGCGGCAAGCGACTGGGCTTCATCACCAACAACAGCAGCAAGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS GCA 72 bp | GGCCGTTCTCTAGCGGGAGCCGGTTGTCCATGTTGGTaGCCACGAGCAGACAGTCGGGCTGCTGCAGGTACC | + |
|
Preference number: 6 (lower is better) Translates to: GRSLAGAGCPCW*PRADSRAAAGT Trigger: GGTACCTGCAGCAGCCCGACTGTCTGCTCGTGGGCACCAACATGGACAACCGGCTCCCGCTAGAGAACGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
||
| CDS CCA 72 bp | CCGCACGGCCTTGGTGAGCTTCATGTAGCTGAAGTGTaGGTCGAAGCCCACCACTACCGCGCGCACGTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PHGLGELHVAEV*VEAHHYRAHVG Trigger: CCCGACGTGCGCGCGGTAGTGGTGGGCTTCGACCCACACTTCAGCTACATGAAGCTCACCAAGGCCGTGCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| CDS CCA 72 bp | AAGATGAAGCGGCTAGGCTTCCCGATGATGTCCGCCTaGCGCTGGGCGGCCATCTCCACGGCTCGCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: KMKRLGFPMMSA*RWAAISTARTR Trigger: TCTGGTGCGAGCCGTGGAGATGGCCGCCCAGCGCCAGGCGGACATCATCGGGAAGCCTAGCCGCTTCATCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| CDS CAA 90 bp | CCCGCAATGAAACGGCCGTTCTCTAGCGGGAGCCGGTTGTCCATGTaGGTGCCCACGAGCAGACAGTCGGGCTGCTGCAGGTACCGCACG | + |
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Preference number: 6 (lower is better) Translates to: PAMKRPFSSGSRLSM*VPTSRQSGCCRYRT Trigger: CGTGCGGTACCTGCAGCAGCCCGACTGTCTGCTCGTGGGCACCAACATGGACAACCGGCTCCCGCTAGAGAACGGCCGTTTCATTGCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| CDS CAA 90 bp | CAGCCGGTACCCGCAATGAAACGGCCGTTCTCTAGCGGGAGCCGGTaGTCCATGTTGGTGCCCACGAGCAGACAGTCGGGCTGCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: QPVPAMKRPFSSGSR*SMLVPTSRQSGCCR Trigger: CCTGCAGCAGCCCGACTGTCTGCTCGTGGGCACCAACATGGACAACCGGCTCCCGCTAGAGAACGGCCGTTTCATTGCGGGTACCGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| CDS CCA 72 bp | AACGGCCGTTCTCTAGCGGGAGCCGGTTGTCCATGTTaGTGCCCACGAGCAGACAGTCGGGCTGCTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: NGRSLAGAGCPC*CPRADSRAAAG Trigger: ACCTGCAGCAGCCCGACTGTCTGCTCGTGGGCACCAACATGGACAACCGGCTCCCGCTAGAGAACGGCCGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| CDS CAA 72 bp | AAACGGCCGTTCTCTAGCGGGAGCCGGTTGTCCATGTaGGTGCCCACGAGCAGACAGTCGGGCTGCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: KRPFSSGSRLSM*VPTSRQSGCCR Trigger: CCTGCAGCAGCCCGACTGTCTGCTCGTGGGCACCAACATGGACAACCGGCTCCCGCTAGAGAACGGCCGTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| CDS CAA 72 bp | CCCGCAATGAAACGGCCGTTCTCTAGCGGGAGCCGGTaGTCCATGTTGGTGCCCACGAGCAGACAGTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: PAMKRPFSSGSR*SMLVPTSRQSG Trigger: GCCCGACTGTCTGCTCGTGGGCACCAACATGGACAACCGGCTCCCGCTAGAGAACGGCCGTTTCATTGCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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| CDS CCA 72 bp | ACCATGACGGTGCGCTCCGGGTTGATACCATACTCCTaGGACACGCAGTCGAAGATGAAGCGGCTAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: TMTVRSGLIPYS*DTQSKMKRLGF Trigger: GAAGCCTAGCCGCTTCATCTTCGACTGCGTGTCCCAGGAGTATGGTATCAACCCGGAGCGCACCGTCATGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053024.8 |
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