Pregenerated sensors for PGM5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041731Ensembl transcript IDs: ENSMUST00000047666.5
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAAACACATCCCGAGCCTGGCTGAGGACTCTGCCCTCGTCCACGTaGCTGCTGGAGCTGCCAGGTCTCTTTCCCTCCCAGGCAAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: ANTSRAWLRTLPSST*LLELPGLFPSQAKK Trigger: TTTCTTTGCCTGGGAGGGAAAGAGACCTGGCAGCTCCAGCAGGCACGTGGACGAGGGCAGAGTCCTCAGCCAGGCTCGGGATGTGTTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR TCA 90 bp | GGAGCTGCCAGGTCTCTTTCCCTCCCAGGCAAAGAAAGCCAGTTGTaGCAATCCACCTCTCTGTCTCATGGGGCCCACAACTGTCCCTTT | + |
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Preference number: 1 (lower is better) Translates to: GAARSLSLPGKESQL*QSTSLSHGAHNCPF Trigger: AAAGGGACAGTTGTGGGCCCCATGAGACAGAGAGGTGGATTGTCACAACTGGCTTTCTTTGCCTGGGAGGGAAAGAGACCTGGCAGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR CCA 90 bp | ATCATAGAAAACCCTAGAAAAGTAAGAGAGGTGGTGCAGAGTTGTTaGCAGGCTGGGAAGTGTGGCCATTGGACGACTGGTGGGAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: IIENPRKVREVVQSC*QAGKCGHWTTGGRG Trigger: CCCCCTCCCACCAGTCGTCCAATGGCCACACTTCCCAGCCTGCCAACAACTCTGCACCACCTCTCTTACTTTTCTAGGGTTTTCTATGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR CCA 90 bp | CATGCCTTGCTCAACAGTCAAAGGGCACTAGGTCACCTCCGCAAATaGTGTGGTAAGGAACCTGCAGTTCCCAAGGGAGACAAACAGAAG | + |
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Preference number: 1 (lower is better) Translates to: HALLNSQRALGHLRK*CGKEPAVPKGDKQK Trigger: CTTCTGTTTGTCTCCCTTGGGAACTGCAGGTTCCTTACCACACCATTTGCGGAGGTGACCTAGTGCCCTTTGACTGTTGAGCAAGGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR TCA 90 bp | GGAAACAAACACCTTGCTGGAAATCTTTCCTTAAGGCGCCGACCTTaGCGACAGCAATCATGCCTTGCTCAACAGTCAAAGGGCACTAGG | + |
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Preference number: 1 (lower is better) Translates to: GNKHLAGNLSLRRRP*RQQSCLAQQSKGTR Trigger: CCTAGTGCCCTTTGACTGTTGAGCAAGGCATGATTGCTGTCGTCAAGGTCGGCGCCTTAAGGAAAGATTTCCAGCAAGGTGTTTGTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR-3UTR TCA 90 bp | TCTGCCCTCGTCCACGTGCCTGCTGGAGCTGCCAGGTCTCTTTCCCTCCCAGGCGCTTCCTCCTCATTTTaGAACCTTTCTAGAAAATCC | + |
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Preference number: 2 (lower is better) Translates to: SALVHVPAGAARSLSLPGASSSF*NLSRKS Trigger: GGATTTTCTAGAAAGGTTTCAAAATGAGGAGGAAGC...GCCTGGGAGGGAAAGAGACCTGGCAGCTCCAGCAGGCACGTGGACGAGGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCCTCGTCCACGTGCCTGCTGGAGCTGCCAGGTCTCTTTCCCTCCCAGGCAACCAAAGACCCTGCTaGTTTTGGAAGACAAATCAA | + |
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Preference number: 2 (lower is better) Translates to: SALVHVPAGAARSLSLPGNQRPC*FWKTNQ Trigger: TTGATTTGTCTTCCAAAAGCAGCAGGGTCTTTGGTT...GCCTGGGAGGGAAAGAGACCTGGCAGCTCCAGCAGGCACGTGGACGAGGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR-3UTR CCA 90 bp | AGGGCACTAGGTCACCTCCGCAAATGGTGTGGTAAGGAACCTGCAGTTCCCAAGCACCTCTCTGTCTCATaGGGCCCACAACTGTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: RALGHLRKWCGKEPAVPKHLSVS*GPQLSL Trigger: AAGGGACAGTTGTGGGCCCCATGAGACAGAGAGGTG...CTTGGGAACTGCAGGTTCCTTACCACACCATTTGCGGAGGTGACCTAGTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR-3UTR CCA 90 bp | CTTAAGGCGCCGACCTTGACGACAGCAATCATGCCTTGCTCAACAGTCAAAGGGGAGTTGTTGGCAGGCTaGGAAGTGTGGCCATTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LKAPTLTTAIMPCSTVKGELLAG*EVWPLD Trigger: GTCCAATGGCCACACTTCCCAGCCTGCCAACAACTC...CCCTTTGACTGTTGAGCAAGGCATGATTGCTGTCGTCAAGGTCGGCGCCTTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAAAACGGAAACAAACACCTTGCTGGAAATCTTTCCTTAAGGCGCCGACCGTGGTGCAGAGTTGTTaGCAGGCTGGGAAGTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: ERKRKQTPCWKSFLKAPTVVQSC*QAGKCG Trigger: GCCACACTTCCCAGCCTGCCAACAACTCTGCACCAC...GGTCGGCGCCTTAAGGAAAGATTTCCAGCAAGGTGTTTGTTTCCGTTTTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR-3UTR TCA 90 bp | GAAGCTTTGGCAGACAACCAACCAAAGACCCTGCTGCTTTTGGAAGACAAATCAAGCAAGAAGGCATGGTaGAGCATCTCTCGGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: EALADNQPKTLLLLEDKSSKKAW*SISRSA Trigger: AGCACTCCGAGAGATGCTTCACCATGCCTTCTTGCT...TGATTTGTCTTCCAAAAGCAGCAGGGTCTTTGGTTGGTTGTCTGCCAAAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR-3UTR CCA 90 bp | CTTAAGGCGCCGACCTTGACGACAGCAATCATGCCTTGCTCAACAGTCAAAGGGACAATAGTGAAGCTTTaGCAGACAACCAACCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: LKAPTLTTAIMPCSTVKGTIVKL*QTTNQR Trigger: TCTTTGGTTGGTTGTCTGCCAAAGCTTCACTATTGT...CCCTTTGACTGTTGAGCAAGGCATGATTGCTGTCGTCAAGGTCGGCGCCTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR-3UTR CCA 90 bp | CAAAGCAGCAAGAGGCACAAAGGACCTGAGGCCCATAATCTTGTATGGAGGTTACGCTGGTATTCTTCCTaGGAGGATTTATACAGACTC | + |
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Preference number: 2 (lower is better) Translates to: QSSKRHKGPEAHNLVWRLRWYSS*EDLYRL Trigger: GAGTCTGTATAAATCCTCCCAGGAAGAATACCAGCG...TAACCTCCATACAAGATTATGGGCCTCAGGTCCTTTGTGCCTCTTGCTGCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR-3UTR GCA 90 bp | GAGAGAAAACGGAAACAAACACCTTGCTGGAAATCTTTCCTTAAGGCGCCGACCACCAACCAAAGACCCTaGTGCTTTTGGAAGACAAAT | + |
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Preference number: 2 (lower is better) Translates to: ERKRKQTPCWKSFLKAPTTNQRP*CFWKTN Trigger: ATTTGTCTTCCAAAAGCAGCAGGGTCTTTGGTTGGT...GGTCGGCGCCTTAAGGAAAGATTTCCAGCAAGGTGTTTGTTTCCGTTTTCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR-3UTR CCA 90 bp | ATAGAAAACCCTAGAAAAGTAAGAGAGGTGGTGCAGAGTTGTTGGCAGGCTGGGGAAAGGGAAGCACTTTaGTGTGATGAAATCCAGGTA | + |
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Preference number: 2 (lower is better) Translates to: IENPRKVREVVQSCWQAGEREAL*CDEIQV Trigger: TACCTGGATTTCATCACACCAAAGTGCTTCCCTTTC...CCCAGCCTGCCAACAACTCTGCACCACCTCTCTTACTTTTCTAGGGTTTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR CAA 90 bp | GCACTTTGGTGTGATGAAATCCAGGTATTAAACAATAGTGAAGCTTaGGCAGACAACCAACCAAAGACCCTGCTGCTTTTGGAAGACAAA | + |
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Preference number: 2 (lower is better) Translates to: ALWCDEIQVLNNSEA*ADNQPKTLLLLEDK Trigger: TTTGTCTTCCAAAAGCAGCAGGGTCTTTGGTTGGTTGTCTGCCAAAGCTTCACTATTGTTTAATACCTGGATTTCATCACACCAAAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR GCA 72 bp | TCCCGAGCCTGGCTGAGGACTCTGCCCTCGTCCACGTaGCTGCTGGAGCTGCCAGGTCTCTTTCCCTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: SRAWLRTLPSST*LLELPGLFPSQ Trigger: CTGGGAGGGAAAGAGACCTGGCAGCTCCAGCAGGCACGTGGACGAGGGCAGAGTCCTCAGCCAGGCTCGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR TCA 72 bp | AGGTCTCTTTCCCTCCCAGGCAAAGAAAGCCAGTTGTaGCAATCCACCTCTCTGTCTCATGGGGCCCACAAC | + |
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Preference number: 3 (lower is better) Translates to: RSLSLPGKESQL*QSTSLSHGAHN Trigger: GTTGTGGGCCCCATGAGACAGAGAGGTGGATTGTCACAACTGGCTTTCTTTGCCTGGGAGGGAAAGAGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR CCA 72 bp | CTCAACAGTCAAAGGGCACTAGGTCACCTCCGCAAATaGTGTGGTAAGGAACCTGCAGTTCCCAAGGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: LNSQRALGHLRK*CGKEPAVPKGD Trigger: GTCTCCCTTGGGAACTGCAGGTTCCTTACCACACCATTTGCGGAGGTGACCTAGTGCCCTTTGACTGTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR CCA 72 bp | CAGCTGATTTATCAGTACAGGGGGCCACTGATGGAATaGCAAAGCAGCAAGAGGCACAAAGGACCTGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: QLIYQYRGPLME*QSSKRHKGPEA Trigger: GGCCTCAGGTCCTTTGTGCCTCTTGCTGCTTTGCCATTCCATCAGTGGCCCCCTGTACTGATAAATCAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR CCA 72 bp | AACCCTAGAAAAGTAAGAGAGGTGGTGCAGAGTTGTTaGCAGGCTGGGAAGTGTGGCCATTGGACGACTGGT | + |
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Preference number: 3 (lower is better) Translates to: NPRKVREVVQSC*QAGKCGHWTTG Trigger: ACCAGTCGTCCAATGGCCACACTTCCCAGCCTGCCAACAACTCTGCACCACCTCTCTTACTTTTCTAGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR-3UTR CAA 90 bp | CAAAGCAGCAAGAGGCACAAAGGACCTGAGGCCCATAATCTTGTATGGAGGTTAAGAGGTGGTGCAGAGTaGTTGGCAGGCTGGGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: QSSKRHKGPEAHNLVWRLRGGAE*LAGWEV Trigger: CACTTCCCAGCCTGCCAACAACTCTGCACCACCTCT...TAACCTCCATACAAGATTATGGGCCTCAGGTCCTTTGTGCCTCTTGCTGCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR TCA 72 bp | CTCCAGCCCCTTCTCTTCTCCTTTATCCACCTACTGTaGGCAAGATCAGATCATGCGCTGGTATTCTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: LQPLLFSFIHLL*ARSDHALVFFL Trigger: CAGGAAGAATACCAGCGCATGATCTGATCTTGCTCACAGTAGGTGGATAAAGGAGAAGAGAAGGGGCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR TCA 72 bp | CACCTTGCTGGAAATCTTTCCTTAAGGCGCCGACCTTaGCGACAGCAATCATGCCTTGCTCAACAGTCAAAG | + |
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Preference number: 3 (lower is better) Translates to: HLAGNLSLRRRP*RQQSCLAQQSK Trigger: CTTTGACTGTTGAGCAAGGCATGATTGCTGTCGTCAAGGTCGGCGCCTTAAGGAAAGATTTCCAGCAAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR-3UTR CAA 90 bp | AGGGCACTAGGTCACCTCCGCAAATGGTGTGGTAAGGAACCTGCAGTTCCCAAGAAGACCCTGCTGCTTTaGGAAGACAAATCAAAACAA | + |
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Preference number: 3 (lower is better) Translates to: RALGHLRKWCGKEPAVPKKTLLL*EDKSKQ Trigger: TTGTTTTGATTTGTCTTCCAAAAGCAGCAGGGTCTT...CTTGGGAACTGCAGGTTCCTTACCACACCATTTGCGGAGGTGACCTAGTGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR-3UTR CAA 90 bp | ATAGAAAACCCTAGAAAAGTAAGAGAGGTGGTGCAGAGTTGTTGGCAGGCTGGGAACAATAGTGAAGCTTaGGCAGACAACCAACCAAAG | + |
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Preference number: 3 (lower is better) Translates to: IENPRKVREVVQSCWQAGNNSEA*ADNQPK Trigger: CTTTGGTTGGTTGTCTGCCAAAGCTTCACTATTGTT...CCCAGCCTGCCAACAACTCTGCACCACCTCTCTTACTTTTCTAGGGTTTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR TCA 90 bp | TCTGCCCTCGTCCACGTGCCTGCTGGAGCTGCCAGGTCTCTTTCCCTCCCAGGCTATTCCGGAGGAGGTTaGGATAGATGTCAACGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SALVHVPAGAARSLSLPGYSGGG*DRCQRG Trigger: ACCCCGTTGACATCTATCTCAACCTCCTCCGGAATA...GCCTGGGAGGGAAAGAGACCTGGCAGCTCCAGCAGGCACGTGGACGAGGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR TCA 90 bp | AGGGCACTAGGTCACCTCCGCAAATGGTGTGGTAAGGAACCTGCAGTTCCCAAGCCGCGAACCCCCATCTaGCGGAAATACGGAATGCAA | + |
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Preference number: 4 (lower is better) Translates to: RALGHLRKWCGKEPAVPKPRTPI*RKYGMQ Trigger: TTGCATTCCGTATTTCCGTCAGATGGGGGTTCGCGG...CTTGGGAACTGCAGGTTCCTTACCACACCATTTGCGGAGGTGACCTAGTGCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR CCA 90 bp | ATAGAAAACCCTAGAAAAGTAAGAGAGGTGGTGCAGAGTTGTTGGCAGGCTGGGCCTCATAGGGCGCCGTaGGCACCGTCAGCACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: IENPRKVREVVQSCWQAGPHRAP*APSALG Trigger: TCCCAGTGCTGACGGTGCCCACGGCGCCCTATGAGG...CCCAGCCTGCCAACAACTCTGCACCACCTCTCTTACTTTTCTAGGGTTTTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR TCA 90 bp | CAAAGCAGCAAGAGGCACAAAGGACCTGAGGCCCATAATCTTGTATGGAGGTTATCAATGCGATGGCGATaGGCGGGCTCAGCACTGCCT | + |
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Preference number: 4 (lower is better) Translates to: QSSKRHKGPEAHNLVWRLSMRWR*AGSALP Trigger: AGGCAGTGCTGAGCCCGCTCATCGCCATCGCATTGA...TAACCTCCATACAAGATTATGGGCCTCAGGTCCTTTGTGCCTCTTGCTGCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR CCA 90 bp | AGGGCACTAGGTCACCTCCGCAAATGGTGTGGTAAGGAACCTGCAGTTCCCAAGTATTGCGGAGTTGGCTaGAGCTCCCAGTTCATCACA | + |
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Preference number: 4 (lower is better) Translates to: RALGHLRKWCGKEPAVPKYCGVG*SSQFIT Trigger: TGTGATGAACTGGGAGCTCCAGCCAACTCCGCAATA...CTTGGGAACTGCAGGTTCCTTACCACACCATTTGCGGAGGTGACCTAGTGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR CCA 90 bp | CGCAAATGGTGTGGTAAGGAACCTGCAGTTCCCAAGGGAGACAAACAGAAGCAATCAGGCCCTGTTTCTTaGTCACGGTGCCATCCACGG | + |
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Preference number: 4 (lower is better) Translates to: RKWCGKEPAVPKGDKQKQSGPVS*SRCHPR Trigger: CCGTGGATGGCACCGTGACCAAGAAACAGGGCCTGA...TTGCTTCTGTTTGTCTCCCTTGGGAACTGCAGGTTCCTTACCACACCATTTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR TCA 90 bp | CTTAAGGCGCCGACCTTGACGACAGCAATCATGCCTTGCTCAACAGTCAAAGGGCAAACTGCTGGCCGATaGAGGACTTGTCTGTCACTA | + |
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Preference number: 4 (lower is better) Translates to: LKAPTLTTAIMPCSTVKGQTAGR*RTCLSL Trigger: TAGTGACAGACAAGTCCTTCATCGGCCAGCAGTTTG...CCCTTTGACTGTTGAGCAAGGCATGATTGCTGTCGTCAAGGTCGGCGCCTTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR TCA 90 bp | GAAGCTTTGGCAGACAACCAACCAAAGACCCTGCTGCTTTTGGAAGACAAATCATGTGGTTCCTGGTCGTaGCCACTGGGATCCCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: EALADNQPKTLLLLEDKSCGSWS*PLGSLS Trigger: CGAGAGGGATCCCAGTGGTCACGACCAGGAACCACA...TGATTTGTCTTCCAAAAGCAGCAGGGTCTTTGGTTGGTTGTCTGCCAAAGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR CCA 90 bp | GAGAGAAAACGGAAACAAACACCTTGCTGGAAATCTTTCCTTAAGGCGCCGACCCCTGGTCGTGACCACTaGGATCCCTCTCGTAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ERKRKQTPCWKSFLKAPTPGRDH*DPSRSS Trigger: AGAGCTACGAGAGGGATCCCAGTGGTCACGACCAGG...GGTCGGCGCCTTAAGGAAAGATTTCCAGCAAGGTGTTTGTTTCCGTTTTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR TCA 90 bp | ATAGAAAACCCTAGAAAAGTAAGAGAGGTGGTGCAGAGTTGTTGGCAGGCTGGGCACCACTGGAGGAACTaGGCCGGAATATTAGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: IENPRKVREVVQSCWQAGHHWRN*AGILAV Trigger: CACGGCTAATATTCCGGCTCAGTTCCTCCAGTGGTG...CCCAGCCTGCCAACAACTCTGCACCACCTCTCTTACTTTTCTAGGGTTTTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR GCA 90 bp | CGCAAATGGTGTGGTAAGGAACCTGCAGTTCCCAAGGGAGACAAACAGAAGCAATGGGACACAGTTTATTaGGGAGTTGGCTGGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RKWCGKEPAVPKGDKQKQWDTVY*GVGWSS Trigger: GGAGCTCCAGCCAACTCCGCAATAAACTGTGTCCCA...TTGCTTCTGTTTGTCTCCCTTGGGAACTGCAGGTTCCTTACCACACCATTTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR GCA 90 bp | CGCAAATGGTGTGGTAAGGAACCTGCAGTTCCCAAGGGAGACAAACAGAAGCAAATTTCCTCCACGCTCTaGTTCCGGGCAGCAATAATG | + |
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Preference number: 4 (lower is better) Translates to: RKWCGKEPAVPKGDKQKQISSTL*FRAAIM Trigger: CATTATTGCTGCCCGGAAGCAGAGCGTGGAGGAAAT...TTGCTTCTGTTTGTCTCCCTTGGGAACTGCAGGTTCCTTACCACACCATTTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR GCA 90 bp | ATAGAAAACCCTAGAAAAGTAAGAGAGGTGGTGCAGAGTTGTTGGCAGGCTGGGCCTCTCGTAGCTCTCTaGATACAGTCTGATGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: IENPRKVREVVQSCWQAGPLVAL*IQSDGG Trigger: GCCACCATCAGACTGTATGCAGAGAGCTACGAGAGG...CCCAGCCTGCCAACAACTCTGCACCACCTCTCTTACTTTTCTAGGGTTTTCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR CCA 90 bp | ATAGAAAACCCTAGAAAAGTAAGAGAGGTGGTGCAGAGTTGTTGGCAGGCTGGGTGGCTTCCAGGAGGGTaGTTGCATAGGTCAGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: IENPRKVREVVQSCWQAGWLPGG*LHRSGL Trigger: CAAACCTGACCTATGCAACCACCCTCCTGGAAGCCA...CCCAGCCTGCCAACAACTCTGCACCACCTCTCTTACTTTTCTAGGGTTTTCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR TCA 90 bp | CGCAAATGGTGTGGTAAGGAACCTGCAGTTCCCAAGGGAGACAAACAGAAGCAAGGAGTCCATCAGATTTaGGAAGAATCTCCATCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RKWCGKEPAVPKGDKQKQGVHQI*EESPSS Trigger: GCTGGATGGAGATTCTTCTCAAATCTGATGGACTCC...TTGCTTCTGTTTGTCTCCCTTGGGAACTGCAGGTTCCTTACCACACCATTTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR TCA 90 bp | TTTGGCAGACAACCAACCAAAGACCCTGCTGCTTTTGGAAGACAAATCAAAACATCTCTGCATACAGTCTaGTGGTGGCCCGCACACCAC | + |
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Preference number: 4 (lower is better) Translates to: FGRQPTKDPAAFGRQIKTSLHTV*WWPAHH Trigger: GTGGTGTGCGGGCCACCATCAGACTGTATGCAGAGA...TGTTTTGATTTGTCTTCCAAAAGCAGCAGGGTCTTTGGTTGGTTGTCTGCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR GCA 90 bp | ATAGAAAACCCTAGAAAAGTAAGAGAGGTGGTGCAGAGTTGTTGGCAGGCTGGGGGTCCCATAACTCCATaGATAGCATCAACACGGATC | + |
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Preference number: 4 (lower is better) Translates to: IENPRKVREVVQSCWQAGGPITP*IASTRI Trigger: GATCCGTGTTGATGCTATGCATGGAGTTATGGGACC...CCCAGCCTGCCAACAACTCTGCACCACCTCTCTTACTTTTCTAGGGTTTTCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR GCA 90 bp | TTTGGCAGACAACCAACCAAAGACCCTGCTGCTTTTGGAAGACAAATCAAAACAGTTTCTTGGTCACGGTaGCATCCACGGGGTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: FGRQPTKDPAAFGRQIKTVSWSR*HPRGPH Trigger: ATGTGGACCCCGTGGATGGCACCGTGACCAAGAAAC...TGTTTTGATTTGTCTTCCAAAAGCAGCAGGGTCTTTGGTTGGTTGTCTGCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR GCA 90 bp | CAAAGCAGCAAGAGGCACAAAGGACCTGAGGCCCATAATCTTGTATGGAGGTTACTGAGATATTTTCAATaGGATGGCGATGAGCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: QSSKRHKGPEAHNLVWRLLRYFQ*DGDERA Trigger: AGCCCGCTCATCGCCATCGCATTGAAAATATCTCAG...TAACCTCCATACAAGATTATGGGCCTCAGGTCCTTTGTGCCTCTTGCTGCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR TCA 90 bp | ATCCAGGTATTAAACAATAGTGAAGCTTTGGCAGACAACCAACCAAAGACCCTGCACGGGGACCTTCATTaGTTTAGCCACTCTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IQVLNNSEALADNQPKTLHGDLH*FSHSVQ Trigger: CTGGACAGAGTGGCTAAATCAATGAAGGTCCCCGTG...CAGGGTCTTTGGTTGGTTGTCTGCCAAAGCTTCACTATTGTTTAATACCTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR CCA 90 bp | TTTGGCAGACAACCAACCAAAGACCCTGCTGCTTTTGGAAGACAAATCAAAACACCTACAGCAAACTGCTaGCCGATGAAGGACTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: FGRQPTKDPAAFGRQIKTPTANC*PMKDLS Trigger: AGACAAGTCCTTCATCGGCCAGCAGTTTGCTGTAGG...TGTTTTGATTTGTCTTCCAAAAGCAGCAGGGTCTTTGGTTGGTTGTCTGCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR CCA 90 bp | ATCCAGGTATTAAACAATAGTGAAGCTTTGGCAGACAACCAACCAAAGACCCTGCCATATTTGGCCCAATaGTCTCTAACAATTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: IQVLNNSEALADNQPKTLPYLAQ*SLTISS Trigger: GGAGGAAATTGTTAGAGACCATTGGGCCAAATATGG...CAGGGTCTTTGGTTGGTTGTCTGCCAAAGCTTCACTATTGTTTAATACCTGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| 3UTR CAA 72 bp | TGTGATGAAATCCAGGTATTAAACAATAGTGAAGCTTaGGCAGACAACCAACCAAAGACCCTGCTGCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: CDEIQVLNNSEA*ADNQPKTLLLL Trigger: CAAAAGCAGCAGGGTCTTTGGTTGGTTGTCTGCCAAAGCTTCACTATTGTTTAATACCTGGATTTCATCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR GCA 90 bp | ATCCAGGTATTAAACAATAGTGAAGCTTTGGCAGACAACCAACCAAAGACCCTGAAAGCTGTCAGTCTTTaGAATGCTGTAAATGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: IQVLNNSEALADNQPKTLKAVSL*NAVNVA Trigger: AGCCACATTTACAGCATTGCAAAGACTGACAGCTTT...CAGGGTCTTTGGTTGGTTGTCTGCCAAAGCTTCACTATTGTTTAATACCTGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS GCA 90 bp | CTGTGGTTCCTGGTCGTGACCACTGGGATCCCTCTCGTAGCTCTCTaGATACAGTCTGATGGTGGCCCGCACACCACTGGAGGAACTGAG | + |
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Preference number: 5 (lower is better) Translates to: LWFLVVTTGIPLVAL*IQSDGGPHTTGGTE Trigger: CTCAGTTCCTCCAGTGGTGTGCGGGCCACCATCAGACTGTATGCAGAGAGCTACGAGAGGGATCCCAGTGGTCACGACCAGGAACCACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS GCA 90 bp | GGGTCCTCTCCGGCCGGTCCTCTCGTGAATCTGAGATATTTTCAATaGGATGGCGATGAGCGGGCTCAGCACTGCCTGTGGTTCCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: GSSPAGPLVNLRYFQ*DGDERAQHCLWFLV Trigger: GACCAGGAACCACAGGCAGTGCTGAGCCCGCTCATCGCCATCGCATTGAAAATATCTCAGATTCACGAGAGGACCGGCCGGAGAGGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS TCA 90 bp | GGCCGGTCCTCTCGTGAATCTGAGATATTTTCAATGCGATGGCGATaGGCGGGCTCAGCACTGCCTGTGGTTCCTGGTCGTGACCACTGG | + |
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Preference number: 5 (lower is better) Translates to: GRSSRESEIFSMRWR*AGSALPVVPGRDHW Trigger: CCAGTGGTCACGACCAGGAACCACAGGCAGTGCTGAGCCCGCTCATCGCCATCGCATTGAAAATATCTCAGATTCACGAGAGGACCGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS GCA 90 bp | CGGCCATATTTGGCCCAATGGTCTCTAACAATTTCCTCCACGCTCTaGTTCCGGGCAGCAATAATGGACAGCCAGACCAAGACAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: RPYLAQWSLTISSTL*FRAAIMDSQTKTAQ Trigger: CTGGGCTGTCTTGGTCTGGCTGTCCATTATTGCTGCCCGGAAGCAGAGCGTGGAGGAAATTGTTAGAGACCATTGGGCCAAATATGGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR CAA 90 bp | GAGAGAAAACGGAAACAAACACCTTGCTGGAAATCTTTCCTTAAGGCGCCGACCTGGCCGATGAAGGACTaGTCTGTCACTAGGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: ERKRKQTPCWKSFLKAPTWPMKD*SVTRAS Trigger: GGAGGCCCTAGTGACAGACAAGTCCTTCATCGGCCA...GGTCGGCGCCTTAAGGAAAGATTTCCAGCAAGGTGTTTGTTTCCGTTTTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR CAA 90 bp | CTTAAGGCGCCGACCTTGACGACAGCAATCATGCCTTGCTCAACAGTCAAAGGGCGGAGTCCATCAGATTaGAGAAGAATCTCCATCCAG | + |
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Preference number: 5 (lower is better) Translates to: LKAPTLTTAIMPCSTVKGRSPSD*RRISIQ Trigger: CTGGATGGAGATTCTTCTCAAATCTGATGGACTCCG...CCCTTTGACTGTTGAGCAAGGCATGATTGCTGTCGTCAAGGTCGGCGCCTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS-3UTR CAA 90 bp | TTTGGCAGACAACCAACCAAAGACCCTGCTGCTTTTGGAAGACAAATCAAAACACCTGTCAGCAAACTCTaGATGGCGTTAAAGTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: FGRQPTKDPAAFGRQIKTPVSKL*MALKSK Trigger: CTTTGACTTTAACGCCATCAAGAGTTTGCTGACAGG...TGTTTTGATTTGTCTTCCAAAAGCAGCAGGGTCTTTGGTTGGTTGTCTGCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS GCA 72 bp | CTGGTCGTGACCACTGGGATCCCTCTCGTAGCTCTCTaGATACAGTCTGATGGTGGCCCGCACACCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: LVVTTGIPLVAL*IQSDGGPHTTG Trigger: TCCAGTGGTGTGCGGGCCACCATCAGACTGTATGCAGAGAGCTACGAGAGGGATCCCAGTGGTCACGACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS GCA 72 bp | CCGGCCGGTCCTCTCGTGAATCTGAGATATTTTCAATaGGATGGCGATGAGCGGGCTCAGCACTGCCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: PAGPLVNLRYFQ*DGDERAQHCLW Trigger: CCACAGGCAGTGCTGAGCCCGCTCATCGCCATCGCATTGAAAATATCTCAGATTCACGAGAGGACCGGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS TCA 72 bp | CCATCCAGCAGGGGTCTCATACACGGGGACCTTCATTaGTTTAGCCACTCTGTCCAGAGCCGTGCTGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: PSSRGLIHGDLH*FSHSVQSRAGW Trigger: CCAACCAGCACGGCTCTGGACAGAGTGGCTAAATCAATGAAGGTCCCCGTGTATGAGACCCCTGCTGGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS GCA 72 bp | AGAGGCCATCTTTCTCTCGGAGGTGATCAGACCCAGTaGCGAAGCTCTCCTCTCCACACAGAGAGCATCGTC | + |
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Preference number: 6 (lower is better) Translates to: RGHLSLGGDQTQ*RSSPLHTESIV Trigger: GACGATGCTCTCTGTGTGGAGAGGAGAGCTTCGGCACTGGGTCTGATCACCTCCGAGAGAAAGATGGCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS CAA 72 bp | TGGCTCCCTACAGCAAACTGCTGGCCGATGAAGGACTaGTCTGTCACTAGGGCCTCCAGATCCCTCATGATG | + |
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Preference number: 6 (lower is better) Translates to: WLPTANCWPMKD*SVTRASRSLMM Trigger: CATCATGAGGGATCTGGAGGCCCTAGTGACAGACAAGTCCTTCATCGGCCAGCAGTTTGCTGTAGGGAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS TCA 72 bp | AGGACTTGTCTGTCACTAGGGCCTCCAGATCCCTCATaGTGTAATAGGTTGCCTTGGGCTCCAGTCCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: RTCLSLGPPDPS*CNRLPWAPVPR Trigger: ACGAGGGACTGGAGCCCAAGGCAACCTATTACATCATGAGGGATCTGGAGGCCCTAGTGACAGACAAGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS TCA 72 bp | TGTAAATGTGGCTCCCTACAGCAAACTGCTGGCCGATaGAGGACTTGTCTGTCACTAGGGCCTCCAGATCCC | + |
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Preference number: 6 (lower is better) Translates to: CKCGSLQQTAGR*RTCLSLGPPDP Trigger: GGGATCTGGAGGCCCTAGTGACAGACAAGTCCTTCATCGGCCAGCAGTTTGCTGTAGGGAGCCACATTTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS TCA 72 bp | TCTCGTGAATCTGAGATATTTTCAATGCGATGGCGATaGGCGGGCTCAGCACTGCCTGTGGTTCCTGGTCGT | + |
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Preference number: 6 (lower is better) Translates to: SRESEIFSMRWR*AGSALPVVPGR Trigger: ACGACCAGGAACCACAGGCAGTGCTGAGCCCGCTCATCGCCATCGCATTGAAAATATCTCAGATTCACGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS GCA 72 bp | TTGGCCCAATGGTCTCTAACAATTTCCTCCACGCTCTaGTTCCGGGCAGCAATAATGGACAGCCAGACCAAG | + |
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Preference number: 6 (lower is better) Translates to: LAQWSLTISSTL*FRAAIMDSQTK Trigger: CTTGGTCTGGCTGTCCATTATTGCTGCCCGGAAGCAGAGCGTGGAGGAAATTGTTAGAGACCATTGGGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS TCA 72 bp | TCCACACAGAGAGCATCGTCCGGAGTCCATCAGATTTaGGAAGAATCTCCATCCAGCAGGGGTCTCATACAC | + |
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Preference number: 6 (lower is better) Translates to: STQRASSGVHQI*EESPSSRGLIH Trigger: GTGTATGAGACCCCTGCTGGATGGAGATTCTTCTCAAATCTGATGGACTCCGGACGATGCTCTCTGTGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS CAA 72 bp | CTCCACACAGAGAGCATCGTCCGGAGTCCATCAGATTaGAGAAGAATCTCCATCCAGCAGGGGTCTCATACA | + |
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Preference number: 6 (lower is better) Translates to: LHTESIVRSPSD*RRISIQQGSHT Trigger: TGTATGAGACCCCTGCTGGATGGAGATTCTTCTCAAATCTGATGGACTCCGGACGATGCTCTCTGTGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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| CDS CAA 72 bp | CATCCACGGGGTCCACATATTCAAAGCTGTCAGTCTTaGCAATGCTGTAAATGTGGCTCCCTACAGCAAACT | + |
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Preference number: 6 (lower is better) Translates to: HPRGPHIQSCQS*QCCKCGSLQQT Trigger: AGTTTGCTGTAGGGAGCCACATTTACAGCATTGCAAAGACTGACAGCTTTGAATATGTGGACCCCGTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047666.5 |
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