Pregenerated sensors for PGM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056131Ensembl transcript IDs: ENSMUST00000070064.11, ENSMUST00000072585.8
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTGTTTTTCTTCTTTCTGTGGTTAATAATGTCCTAGTATCAGAATaGTCACTTGGTTGTCAGAGGCTTCAGGTATCAGATGGAGCTGTG | + |
|
Preference number: 1 (lower is better) Translates to: VVFLLSVVNNVLVSE*SLGCQRLQVSDGAV Trigger: CACAGCTCCATCTGATACCTGAAGCCTCTGACAACCAAGTGACCATTCTGATACTAGGACATTATTAACCACAGAAAGAAGAAAAACAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| 3UTR-3UTR TCA 90 bp | TGGACCACACACTCTAGTGGGCACAGCACAGAGCTCTGCCAGTACAATGAAAGAATTTCTTCCTCACATTaGGATCCGCATGGGAAATTG | + |
|
Preference number: 2 (lower is better) Translates to: WTTHSSGHSTELCQYNERISSSH*DPHGKL Trigger: CAATTTCCCATGCGGATCTCAATGTGAGGAAGAAAT...TCTTTCATTGTACTGGCAGAGCTCTGTGCTGTGCCCACTAGAGTGTGTGGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| 3UTR-3UTR GCA 90 bp | ATTGGTTCATACGAAATCTCCCCATTTGAACCAGGTAGGTCAGTGCTACAAAACGCAATCGAAAGGGGCTaGAAAGAAGTTAGTAAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: IGSYEISPFEPGRSVLQNAIERG*KEVSKV Trigger: AACTTTACTAACTTCTTTGCAGCCCCTTTCGATTGC...GTTTTGTAGCACTGACCTACCTGGTTCAAATGGGGAGATTTCGTATGAACCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| 3UTR-3UTR TCA 90 bp | GTTCATACGAAATCTCCCCATTTGAACCAGGTAGGTCAGTGCTACAAAACATCTACATGCATGACATGTTaGTGTCATGATTACAAATGC | + |
|
Preference number: 2 (lower is better) Translates to: VHTKSPHLNQVGQCYKTSTCMTC*CHDYKC Trigger: GCATTTGTAATCATGACATCAACATGTCATGCATGT...AGATGTTTTGTAGCACTGACCTACCTGGTTCAAATGGGGAGATTTCGTATGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| 3UTR-3UTR GCA 90 bp | AAGCAATCGAAAGGGGCTGCAAAGAAGTTAGTAAAGTTTAATTTCCCAGTACCCTGTCATGATTACAAATaGCCTAGTACTGCCAATATT | + |
|
Preference number: 2 (lower is better) Translates to: KQSKGAAKKLVKFNFPVPCHDYK*PSTANI Trigger: AATATTGGCAGTACTAGGGCATTTGTAATCATGACA...GGGTACTGGGAAATTAAACTTTACTAACTTCTTTGCAGCCCCTTTCGATTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| 3UTR CAA 90 bp | CCTACAAGGTCTATATTTGCATATATAGTCCATTGTTTCACTGTCTaGGGTTGTCTTAAACCTGCAAAATACACACCACGTTTTCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: PTRSIFAYIVHCFTV*GCLKPAKYTPRFLF Trigger: AAAAAGAAAACGTGGTGTGTATTTTGCAGGTTTAAGACAACCCAAGACAGTGAAACAATGGACTATATATGCAAATATAGACCTTGTAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTACATGCATGACATGTTaGTGTCATGATTACAAATGC | + |
|
Preference number: 2 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLTCMTC*CHDYKC Trigger: GCATTTGTAATCATGACATCAACATGTCATGCATGT...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTTGTCATGATTACAAATaGCCTAGTACTGCCAATATT | + |
|
Preference number: 2 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLCHDYK*PSTANI Trigger: AATATTGGCAGTACTAGGGCATTTGTAATCATGACA...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| 3UTR GCA 72 bp | TGGACCACACACTCTAGTGGGCACAGCACAGAGCTCTaGCAGTACAATGAAAGATGGGCCACCTGCCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: WTTHSSGHSTEL*QYNERWATCQF Trigger: GAACTGGCAGGTGGCCCATCTTTCATTGTACTGGCAGAGCTCTGTGCTGTGCCCACTAGAGTGTGTGGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| 3UTR CCA 72 bp | CATTTGAACCAGGTAGGTCAGTGCTACAAAACATCTTaGTTAGGTAAGCAATCGAAAGGGGCTGCAAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HLNQVGQCYKTS*LGKQSKGAAKK Trigger: CTTCTTTGCAGCCCCTTTCGATTGCTTACCTAACCAAGATGTTTTGTAGCACTGACCTACCTGGTTCAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| 3UTR TCA 72 bp | CTATCTAGAAATAATCCATTAACATGCATGACATGTTaGTGTCATGATTACAAATGCCCTAGTACTGCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LSRNNPLTCMTC*CHDYKCPSTAN Trigger: ATTGGCAGTACTAGGGCATTTGTAATCATGACATCAACATGTCATGCATGTTAATGGATTATTTCTAGATAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGCACAGCACAGAGCTCTGCCAGTACAATGAAAGATGGGCCACCTGCCAGTCACTGGCCAGACAGGTaGCATGCTCCTCCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGTAQSSASTMKDGPPASHWPDR*HAPPRK Trigger: CTTCCTGGGAGGAGCATGCCACCTGTCTGGCCAGTG...ACTGGCAGGTGGCCCATCTTTCATTGTACTGGCAGAGCTCTGTGCTGTGCCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR GCA 90 bp | GTGGGCACAGCACAGAGCTCTGCCAGTACAATGAAAGATGGGCCACCTGCCAGTCACCAGGTCATTGATTaGCTCTTGGAGTCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGTAQSSASTMKDGPPASHQVID*LLESWW Trigger: CCACCAGGACTCCAAGAGGCAATCAATGACCTGGTG...ACTGGCAGGTGGCCCATCTTTCATTGTACTGGCAGAGCTCTGTGCTGTGCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR CCA 90 bp | CCTGGACCACACACTCTAGTGGGCACAGCACAGAGCTCTGCCAGTACAATGAAAAAAGTTTCTCACTGCTaGGCCTGGTGTCTCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGPHTLVGTAQSSASTMKKVSHC*AWCLWQ Trigger: TTGCCAGAGACACCAGGCCCAGCAGTGAGAAACTTT...TTTCATTGTACTGGCAGAGCTCTGTGCTGTGCCCACTAGAGTGTGTGGTCCAGG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR TCA 90 bp | AGTGGGCACAGCACAGAGCTCTGCCAGTACAATGAAAGATGGGCCACCTGCCAGATCTATCACAGATTGTaGAAGTTTCTCACTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGHSTELCQYNERWATCQIYHRL*KFLTAG Trigger: CCCAGCAGTGAGAAACTTTCACAATCTGTGATAGAT...CTGGCAGGTGGCCCATCTTTCATTGTACTGGCAGAGCTCTGTGCTGTGCCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR TCA 90 bp | CAATCGAAAGGGGCTGCAAAGAAGTTAGTAAAGTTTAATTTCCCAGTACCCTTCCCAGCAGTCCCATACTaGAGAATGAGCCCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSKGAAKKLVKFNFPVPFPAVPY*RMSPWG Trigger: GCCCCAGGGGCTCATTCTTCAGTATGGGACTGCTGG...GAAGGGTACTGGGAAATTAAACTTTACTAACTTCTTTGCAGCCCCTTTCGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR GCA 90 bp | CCTGCCAGTTCTGATGCTGCTAAGCAAACCAGTCAGTCATTTCTTCCTCACATTGTGAAAGTTTCTCACTaGTGGGCCTGGTGTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PASSDAAKQTSQSFLPHIVKVSH*WAWCLW Trigger: CCAGAGACACCAGGCCCAGCAGTGAGAAACTTTCAC...AATGTGAGGAAGAAATGACTGACTGGTTTGCTTAGCAGCATCAGAACTGGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR GCA 90 bp | TATCAGAATGGTCACTTGGTTGTCAGAGGCTTCAGGTATCAGATGGAGCTGTGTTGCTTCACTGAACAGTaGTGTTCCATGCCCGTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: YQNGHLVVRGFRYQMELCCFTEQ*CSMPVR Trigger: GCGAACGGGCATGGAACAGCACTGTTCAGTGAAGCA...ACACAGCTCCATCTGATACCTGAAGCCTCTGACAACCAAGTGACCATTCTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR GCA 90 bp | CTAGTATCAGAATGGTCACTTGGTTGTCAGAGGCTTCAGGTATCAGATGGAGCTGTGGTCTTTCTCCAATaGCTCCAGCCAGCTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LVSEWSLGCQRLQVSDGAVVFLQ*LQPAGT Trigger: TGTTCCAGCTGGCTGGAGGCATTGGAGAAAGACCAC...AGCTCCATCTGATACCTGAAGCCTCTGACAACCAAGTGACCATTCTGATACTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR CCA 90 bp | GTATCAGAATGGTCACTTGGTTGTCAGAGGCTTCAGGTATCAGATGGAGCTGTGTGCTCGCAAGCGTCCTaGCTGCTTTTCCTTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSEWSLGCQRLQVSDGAVCSQAS*LLFLFH Trigger: ATGGAAAAGGAAAAGCAGCCAGGACGCTTGCGAGCA...CACAGCTCCATCTGATACCTGAAGCCTCTGACAACCAAGTGACCATTCTGATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR CCA 90 bp | CTAGTATCAGAATGGTCACTTGGTTGTCAGAGGCTTCAGGTATCAGATGGAGCTATGCCTCCAGCCAGCTaGAACACCAGCAAACTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LVSEWSLGCQRLQVSDGAMPPAS*NTSKLT Trigger: AGTGAGTTTGCTGGTGTTCCAGCTGGCTGGAGGCAT...AGCTCCATCTGATACCTGAAGCCTCTGACAACCAAGTGACCATTCTGATACTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR GCA 90 bp | TCGAAAGGGGCTGCAAAGAAGTTAGTAAAGTTTAATTTCCCAGTACCCTTCATGGCTTCAAGGCCCCTATaGCGTTGGCACAGTCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: SKGAAKKLVKFNFPVPFMASRPL*RWHSQP Trigger: AGGTTGACTGTGCCAACGGCATAGGGGCCTTGAAGC...CATGAAGGGTACTGGGAAATTAAACTTTACTAACTTCTTTGCAGCCCCTTTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR CCA 90 bp | TCGAAAGGGGCTGCAAAGAAGTTAGTAAAGTTTAATTTCCCAGTACCCTTCATGCGAGATGCTGGGCATTaGTCCGAAATCCAGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKGAAKKLVKFNFPVPFMRDAGH*SEIQQS Trigger: GGACTGCTGGATTTCGGACCAATGCCCAGCATCTCG...CATGAAGGGTACTGGGAAATTAAACTTTACTAACTTCTTTGCAGCCCCTTTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR TCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTCCAGCAGTCCCATACTaGAGAATGAGCCCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLPAVPY*RMSPWG Trigger: GCCCCAGGGGCTCATTCTTCAGTATGGGACTGCTGG...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR GCA 90 bp | TGGACCACACACTCTAGTGGGCACAGCACAGAGCTCTGCCAGTACAATGAAAGAATGAAAGTGACCATCTaGATCACAGTAGTAATACAC | + |
|
Preference number: 4 (lower is better) Translates to: WTTHSSGHSTELCQYNERMKVTI*ITVVIH Trigger: GTGTATTACTACTGTGATGCAGATGGTCACTTTCAT...TCTTTCATTGTACTGGCAGAGCTCTGTGCTGTGCCCACTAGAGTGTGTGGTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR GCA 90 bp | CCTGCCAGTTCTGATGCTGCTAAGCAAACCAGTCAGTCATTTCTTCCTCACATTCGTGGAACTTCCATTTaGATATGCTGTCTGTACGAC | + |
|
Preference number: 4 (lower is better) Translates to: PASSDAAKQTSQSFLPHIRGTSI*ICCLYD Trigger: GTCGTACAGACAGCATATGCAAATGGAAGTTCCACG...AATGTGAGGAAGAAATGACTGACTGGTTTGCTTAGCAGCATCAGAACTGGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR GCA 90 bp | AAATTGGTTCATACGAAATCTCCCCATTTGAACCAGGTAGGTCAGTGCTACAAACGCAAGCGTCCTGGCTaGTTTTCCTTTTCCATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLVHTKSPHLNQVGQCYKRKRPG*FSFSIV Trigger: GACGATGGAAAAGGAAAAGCAGCCAGGACGCTTGCG...TTTGTAGCACTGACCTACCTGGTTCAAATGGGGAGATTTCGTATGAACCAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR CCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTCACTGGCCAGACAGGTaGCATGCTCCTCCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLHWPDR*HAPPRK Trigger: CTTCCTGGGAGGAGCATGCCACCTGTCTGGCCAGTG...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR CCA 90 bp | GATGCTGCTAAGCAAACCAGTCAGTCATTTCTTCCTCACATTGAGATCCGCATGCGCTTTCTTGTGAGTTaGCTTCTGCATATACTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: DAAKQTSQSFLPHIEIRMRFLVS*LLHILG Trigger: TCCGAGTATATGCAGAAGCCAACTCACAAGAAAGCG...CATGCGGATCTCAATGTGAGGAAGAAATGACTGACTGGTTTGCTTAGCAGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| 3UTR CAA 72 bp | CCGCATGGGAAATTGGTTCATACGAAATCTCCCCATTaGAACCAGGTAGGTCAGTGCTACAAAACATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PHGKLVHTKSPH*NQVGQCYKTSW Trigger: CCAAGATGTTTTGTAGCACTGACCTACCTGGTTCAAATGGGGAGATTTCGTATGAACCAATTTCCCATGCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR TCA 90 bp | AAGCAATCGAAAGGGGCTGCAAAGAAGTTAGTAAAGTTTAATTTCCCAGTACCCCTTCAACTGCTTCACTaGACAGTGCTGTTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQSKGAAKKLVKFNFPVPLQLLH*TVLFHA Trigger: GGCATGGAACAGCACTGTTCAGTGAAGCAGTTGAAG...GGGTACTGGGAAATTAAACTTTACTAACTTCTTTGCAGCCCCTTTCGATTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR GCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTGCTTCAAGGCCCCTATaGCGTTGGCACAGTCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLASRPL*RWHSQP Trigger: AGGTTGACTGTGCCAACGGCATAGGGGCCTTGAAGC...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTCGAGATGCTGGGCATTaGTCCGAAATCCAGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLRDAGH*SEIQQS Trigger: GGACTGCTGGATTTCGGACCAATGCCCAGCATCTCG...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| 3UTR CAA 72 bp | CTGCTAAGCAAACCAGTCAGTCATTTCTTCCTCACATaGAGATCCGCATGGGAAATTGGTTCATACGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LLSKPVSHFFLT*RSAWEIGSYEI Trigger: GATTTCGTATGAACCAATTTCCCATGCGGATCTCAATGTGAGGAAGAAATGACTGACTGGTTTGCTTAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR GCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTGTGAAAGTTTCTCACTaGTGGGCCTGGTGTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLVKVSH*WAWCLW Trigger: CCAGAGACACCAGGCCCAGCAGTGAGAAACTTTCAC...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTTGCTTCACTGAACAGTaGTGTTCCATGCCCGTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLCFTEQ*CSMPVR Trigger: GCGAACGGGCATGGAACAGCACTGTTCAGTGAAGCA...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTCGCAAGCGTCCTGGCTaGTTTTCCTTTTCCATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLRKRPG*FSFSIV Trigger: GACGATGGAAAAGGAAAAGCAGCCAGGACGCTTGCG...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTCACCAGGTCATTGATTaGCTCTTGGAGTCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLHQVID*LLESWW Trigger: CCACCAGGACTCCAAGAGGCAATCAATGACCTGGTG...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTGTGGTCTTTCTCCAATaGCTCCAGCCAGCTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLVVFLQ*LQPAGT Trigger: TGTTCCAGCTGGCTGGAGGCATTGGAGAAAGACCAC...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTATGCCTCCAGCCAGCTaGAACACCAGCAAACTCACT | + |
|
Preference number: 4 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLMPPAS*NTSKLT Trigger: AGTGAGTTTGCTGGTGTTCCAGCTGGCTGGAGGCAT...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR TCA 90 bp | CAATCGAAAGGGGCTGCAAAGAAGTTAGTAAAGTTTAATTTCCCAGTACCCTTCTCTTGTCTCCATCTATaGGATGAAAGTGACCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSKGAAKKLVKFNFPVPFSCLHL*DESDHL Trigger: CAGATGGTCACTTTCATCTCATAGATGGAGACAAGA...GAAGGGTACTGGGAAATTAAACTTTACTAACTTCTTTGCAGCCCCTTTCGATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR TCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTCTTCAACTGCTTCACTaGACAGTGCTGTTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLLQLLH*TVLFHA Trigger: GGCATGGAACAGCACTGTTCAGTGAAGCAGTTGAAG...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTTCTTCACCAGGTCATTaGTTGCCTCTTGGAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLSSPGH*LPLGVL Trigger: CAGGACTCCAAGAGGCAATCAATGACCTGGTGAAGA...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR CCA 90 bp | ATAGTCCATTGTTTCACTGTCTTGGGTTGTCTTAAACCTGCAAAATACACACCACTTCAAGGTACCGCGTaGAACTTCCATTTGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: IVHCFTVLGCLKPAKYTPLQGTA*NFHLHM Trigger: CATATGCAAATGGAAGTTCCACGCGGTACCTTGAAG...TGGTGTGTATTTTGCAGGTTTAAGACAACCCAAGACAGTGAAACAATGGACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR CCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTTGCTCGCAAGCGTCCTaGCTGCTTTTCCTTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLCSQAS*LLFLFH Trigger: ATGGAAAAGGAAAAGCAGCCAGGACGCTTGCGAGCA...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTCGTGGAACTTCCATTTaGATATGCTGTCTGTACGAC | + |
|
Preference number: 4 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLRGTSI*ICCLYD Trigger: GTCGTACAGACAGCATATGCAAATGGAAGTTCCACG...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTCTTCAAGGTACCGCGTaGAACTTCCATTTGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLLQGTA*NFHLHM Trigger: CATATGCAAATGGAAGTTCCACGCGGTACCTTGAAG...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTCGCTTTCTTGTGAGTTaGCTTCTGCATATACTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLRFLVS*LLHILG Trigger: TCCGAGTATATGCAGAAGCCAACTCACAAGAAAGCG...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTATCTATCACAGATTGTaGAAGTTTCTCACTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLIYHRL*KFLTAG Trigger: CCCAGCAGTGAGAAACTTTCACAATCTGTGATAGAT...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CCA 90 bp | CCACGATGGCAGCAAGCACTTGCCGCACGTCCTGCTCCTCCGCACTaGCCAGACAGGTGGCATGCTCCTCCCAGGAAGGGGCCAACATTT | + |
|
Preference number: 5 (lower is better) Translates to: PRWQQALAARPAPPH*PDRWHAPPRKGPTF Trigger: AAATGTTGGCCCCTTCCTGGGAGGAGCATGCCACCTGTCTGGCCAGTGCGGAGGAGCAGGACGTGCGGCAAGTGCTTGCTGCCATCGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CCA 90 bp | CAAGCACTTGCCGCACGTCCTGCTCCTCCGCACTGGCCAGACAGGTaGCATGCTCCTCCCAGGAAGGGGCCAACATTTCCCCCAAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QALAARPAPPHWPDR*HAPPRKGPTFPPKD Trigger: ATCCTTTGGGGGAAATGTTGGCCCCTTCCTGGGAGGAGCATGCCACCTGTCTGGCCAGTGCGGAGGAGCAGGACGTGCGGCAAGTGCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS GCA 90 bp | ACAGCTTCTTTCTCCACGATGGCAGCAAGCACTTGCCGCACGTCCTaGTCCTCCGCACTGGCCAGACAGGTGGCATGCTCCTCCCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TASFSTMAASTCRTS*SSALARQVACSSQE Trigger: TTCCTGGGAGGAGCATGCCACCTGTCTGGCCAGTGCGGAGGAGCAGGACGTGCGGCAAGTGCTTGCTGCCATCGTGGAGAAAGAAGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS GCA 90 bp | TGTGTCAGATCCACAGCTTCTTTCTCCACGATGGCAGCAAGCACTTaGCGCACGTCCTGCTCCTCCGCACTGGCCAGACAGGTGGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: CVRSTASFSTMAAST*RTSCSSALARQVAC Trigger: GCATGCCACCTGTCTGGCCAGTGCGGAGGAGCAGGACGTGCGGCAAGTGCTTGCTGCCATCGTGGAGAAAGAAGCTGTGGATCTGACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CCA 90 bp | CTACGAAGGCGGTCTGTGTCAGATCCACAGCTTCTTTCTCCACGATaGCAGCAAGCACTTGCCGCACGTCCTGCTCCTCCGCACTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LRRRSVSDPQLLSPR*QQALAARPAPPHWP Trigger: TGGCCAGTGCGGAGGAGCAGGACGTGCGGCAAGTGCTTGCTGCCATCGTGGAGAAAGAAGCTGTGGATCTGACACAGACCGCCTTCGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CCA 90 bp | GGTCTACGAAAGCCTTGGAGAGCTTCTGGCAGTAGCCTTCTACGGTaGCCTGTCCATACCGGCCTCCGGAATTCCGGCAATACACCATGT | + |
|
Preference number: 5 (lower is better) Translates to: GLRKPWRASGSSLLR*PVHTGLRNSGNTPC Trigger: ACATGGTGTATTGCCGGAATTCCGGAGGCCGGTATGGACAGGCCACCGTAGAAGGCTACTGCCAGAAGCTCTCCAAGGCTTTCGTAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS GCA 90 bp | CTTCACCAGGTCATTGATTGCCTCTTGGAGTCCTGGTGGAGTGACTaGTTGTCTCTCAGCATCCGTGGTGCTAATAACTCTCCTGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LHQVIDCLLESWWSD*LSLSIRGANNSPVR Trigger: GCGGACAGGAGAGTTATTAGCACCACGGATGCTGAGAGACAAGCAGTCACTCCACCAGGACTCCAAGAGGCAATCAATGACCTGGTGAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CCA 90 bp | GCTCGGGCAAGTGTGTATTTCTTCACCAGGTCATTGATTGCCTCTTaGAGTCCTGGTGGAGTGACTGCTTGTCTCTCAGCATCCGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARASVYFFTRSLIAS*SPGGVTACLSASVV Trigger: CACCACGGATGCTGAGAGACAAGCAGTCACTCCACCAGGACTCCAAGAGGCAATCAATGACCTGGTGAAGAAATACACACTTGCCCGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS TCA 90 bp | TGCTTTGACCGCAGGACAGCTAGCAATCCCATTCGAAACATGATATaGTCGAGATGCTGGGCATTGGTCCGAAATCCAGCAGTCCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: CFDRRTASNPIRNMI*SRCWALVRNPAVPY Trigger: GTATGGGACTGCTGGATTTCGGACCAATGCCCAGCATCTCGATCATATCATGTTTCGAATGGGATTGCTAGCTGTCCTGCGGTCAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CCA 90 bp | ATCGAAGGAGCAGCATCTCTCACCGGACTTCATTTCAATTCCCTGTaGGGGTTTCTGTTGACTTTTCACAAAGTCAGCACCGCACAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IEGAASLTGLHFNSL*GFLLTFHKVSTAQV Trigger: CACCTGTGCGGTGCTGACTTTGTGAAAAGTCAACAGAAACCCCCACAGGGAATTGAAATGAAGTCCGGTGAGAGATGCTGCTCCTTCGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CCA 90 bp | GCAAACTCACTTCATAGGCAAGCCTGTCTGCGCTTTCTTGTGAGTTaGCTTCTGCATATACTCGGACAATGTCTTCAGTACCAGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ANSLHRQACLRFLVS*LLHILGQCLQYQRA Trigger: GGCCCTCTGGTACTGAAGACATTGTCCGAGTATATGCAGAAGCCAACTCACAAGAAAGCGCAGACAGGCTTGCCTATGAAGTGAGTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS TCA 90 bp | TTGTTTGCTTTGACCGCAGGACAGCTAGCAATCCCATTCGAAACATaGTATGATCGAGATGCTGGGCATTGGTCCGAAATCCAGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFALTAGQLAIPFET*YDRDAGHWSEIQQS Trigger: GGACTGCTGGATTTCGGACCAATGCCCAGCATCTCGATCATATCATGTTTCGAATGGGATTGCTAGCTGTCCTGCGGTCAAAGCAAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS TCA 90 bp | CACCAGCAAACTCACTTCATAGGCAAGCCTGTCTGCGCTTTCTTGTaGGTTGGCTTCTGCATATACTCGGACAATGTCTTCAGTACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HQQTHFIGKPVCAFL*VGFCIYSDNVFSTR Trigger: TCTGGTACTGAAGACATTGTCCGAGTATATGCAGAAGCCAACTCACAAGAAAGCGCAGACAGGCTTGCCTATGAAGTGAGTTTGCTGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CCA 90 bp | TGTGTATTTCTTCACCAGGTCATTGATTGCCTCTTGGAGTCCTGGTaGAGTGACTGCTTGTCTCTCAGCATCCGTGGTGCTAATAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: CVFLHQVIDCLLESW*SDCLSLSIRGANNS Trigger: AGAGTTATTAGCACCACGGATGCTGAGAGACAAGCAGTCACTCCACCAGGACTCCAAGAGGCAATCAATGACCTGGTGAAGAAATACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CCA 90 bp | AAGTGTGTATTTCTTCACCAGGTCATTGATTGCCTCTTGGAGTCCTaGTGGAGTGACTGCTTGTCTCTCAGCATCCGTGGTGCTAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: KCVFLHQVIDCLLES*WSDCLSLSIRGANN Trigger: GTTATTAGCACCACGGATGCTGAGAGACAAGCAGTCACTCCACCAGGACTCCAAGAGGCAATCAATGACCTGGTGAAGAAATACACACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGTATCAGAATGGTCACTTGGTTGTCAGAGGCTTCAGGTATCAGATGGAGCTTCTTCACCAGGTCATaGATTGCCTCTTGGAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PSIRMVTWLSEASGIRWSFFTRS*IASWSP Trigger: AGGACTCCAAGAGGCAATCAATGACCTGGTGAAGAA...GCTCCATCTGATACCTGAAGCCTCTGACAACCAAGTGACCATTCTGATACTAGG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS GCA 90 bp | GGGTTATGTGAGGCCGTAACCATGACTCCAATGGTAGATCTTGTTTaGTTTGACCGCAGGACAGCTAGCAATCCCATTCGAAACATGATA | + |
|
Preference number: 5 (lower is better) Translates to: GLCEAVTMTPMVDLV*FDRRTASNPIRNMI Trigger: TATCATGTTTCGAATGGGATTGCTAGCTGTCCTGCGGTCAAAGCAAACAAGATCTACCATTGGAGTCATGGTTACGGCCTCACATAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR CAA 90 bp | CTAGTATCAGAATGGTCACTTGGTTGTCAGAGGCTTCAGGTATCAGATGGAGCTGCGTGGAACTTCCATTaGCATATGCTGTCTGTACGA | + |
|
Preference number: 5 (lower is better) Translates to: LVSEWSLGCQRLQVSDGAAWNFH*HMLSVR Trigger: TCGTACAGACAGCATATGCAAATGGAAGTTCCACGC...AGCTCCATCTGATACCTGAAGCCTCTGACAACCAAGTGACCATTCTGATACTAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS GCA 90 bp | CTTCATAACTTCTTCAAGGTACCGCGTGGAACTTCCATTTGCATATaGTGTCTGTACGACTCCGAGGTTCACACTTTCTCCAATCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LHNFFKVPRGTSICI*CLYDSEVHTFSNLQ Trigger: TTGGAGATTGGAGAAAGTGTGAACCTCGGAGTCGTACAGACAGCATATGCAAATGGAAGTTCCACGCGGTACCTTGAAGAAGTTATGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAATCGAAAGGGGCTGCAAAGAAGTTAGTAAAGTTTAATTTCCCAGTACCCAAGGCCCCTATGCCGTaGGCACAGTCAACCTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: KQSKGAAKKLVKFNFPVPKAPMP*AQSTLT Trigger: AGTTAAGGTTGACTGTGCCAACGGCATAGGGGCCTT...GGGTACTGGGAAATTAAACTTTACTAACTTCTTTGCAGCCCCTTTCGATTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR CAA 90 bp | ATAGTCCATTGTTTCACTGTCTTGGGTTGTCTTAAACCTGCAAAATACACACCATGGTGGAGTGACTGCTaGTCTCTCAGCATCCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IVHCFTVLGCLKPAKYTPWWSDC*SLSIRG Trigger: ACCACGGATGCTGAGAGACAAGCAGTCACTCCACCA...TGGTGTGTATTTTGCAGGTTTAAGACAACCCAAGACAGTGAAACAATGGACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTTGGTGGAGTGACTGCTaGTCTCTCAGCATCCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLWWSDC*SLSIRG Trigger: ACCACGGATGCTGAGAGACAAGCAGTCACTCCACCA...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR CAA 90 bp | ATTGGTTCATACGAAATCTCCCCATTTGAACCAGGTAGGTCAGTGCTACAAAACTCCGCGACCTTAACTTaGAGTTGTCTGTTAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: IGSYEISPFEPGRSVLQNSATLT*SCLLGR Trigger: TCTTCCTAACAGACAACTCAAAGTTAAGGTCGCGGA...GTTTTGTAGCACTGACCTACCTGGTTCAAATGGGGAGATTTCGTATGAACCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTAAGGCCCCTATGCCGTaGGCACAGTCAACCTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLKAPMP*AQSTLT Trigger: AGTTAAGGTTGACTGTGCCAACGGCATAGGGGCCTT...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR CAA 90 bp | ATAGTCCATTGTTTCACTGTCTTGGGTTGTCTTAAACCTGCAAAATACACACCACTGTGGGGGTTTCTGTaGACTTTTCACAAAGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IVHCFTVLGCLKPAKYTPLWGFL*TFHKVS Trigger: GCTGACTTTGTGAAAAGTCAACAGAAACCCCCACAG...TGGTGTGTATTTTGCAGGTTTAAGACAACCCAAGACAGTGAAACAATGGACTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070064.11 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTGCGCTTTCTTGTGAGTaGGCTTCTGCATATACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLALSCE*ASAYTR Trigger: CCGAGTATATGCAGAAGCCAACTCACAAGAAAGCGC...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTCTGTGGGGGTTTCTGTaGACTTTTCACAAAGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLLWGFL*TFHKVS Trigger: GCTGACTTTGTGAAAAGTCAACAGAAACCCCCACAG...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAGTACCCTTCATGAATTCACTTCATACCCTGTAAAATTAATGACACTTTTCTTCACCAGGTCATaGATTGCCTCTTGGAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FPSTLHEFTSYPVKLMTLFFTRS*IASWSP Trigger: AGGACTCCAAGAGGCAATCAATGACCTGGTGAAGAA...AAGTGTCATTAATTTTACAGGGTATGAAGTGAATTCATGAAGGGTACTGGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CCA 72 bp | GCCGCACGTCCTGCTCCTCCGCACTGGCCAGACAGGTaGCATGCTCCTCCCAGGAAGGGGCCAACATTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: AARPAPPHWPDR*HAPPRKGPTFP Trigger: GGGAAATGTTGGCCCCTTCCTGGGAGGAGCATGCCACCTGTCTGGCCAGTGCGGAGGAGCAGGACGTGCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CCA 72 bp | CAGCAAGCACTTGCCGCACGTCCTGCTCCTCCGCACTaGCCAGACAGGTGGCATGCTCCTCCCAGGAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QQALAARPAPPH*PDRWHAPPRKG Trigger: CCCCTTCCTGGGAGGAGCATGCCACCTGTCTGGCCAGTGCGGAGGAGCAGGACGTGCGGCAAGTGCTTGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS GCA 72 bp | TTCTCCACGATGGCAGCAAGCACTTGCCGCACGTCCTaGTCCTCCGCACTGGCCAGACAGGTGGCATGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FSTMAASTCRTS*SSALARQVACS Trigger: GGAGCATGCCACCTGTCTGGCCAGTGCGGAGGAGCAGGACGTGCGGCAAGTGCTTGCTGCCATCGTGGAGAA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CAA 90 bp | CTGTGTCAGATCCACAGCTTCTTTCTCCACGATGGCAGCAAGCACTaGCCGCACGTCCTGCTCCTCCGCACTGGCCAGACAGGTGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LCQIHSFFLHDGSKH*PHVLLLRTGQTGGM Trigger: CATGCCACCTGTCTGGCCAGTGCGGAGGAGCAGGACGTGCGGCAAGTGCTTGCTGCCATCGTGGAGAAAGAAGCTGTGGATCTGACACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CCA 72 bp | CGGTCTGTGTCAGATCCACAGCTTCTTTCTCCACGATaGCAGCAAGCACTTGCCGCACGTCCTGCTCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: RSVSDPQLLSPR*QQALAARPAPP Trigger: CGGAGGAGCAGGACGTGCGGCAAGTGCTTGCTGCCATCGTGGAGAAAGAAGCTGTGGATCTGACACAGACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CAA 72 bp | CACAAAGTCAGCACCGCACAGGTGATTGAGCCGCCCTaGGGTCCCATCATTAAACAGCAGAACCGACAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HKVSTAQVIEPP*GPIIKQQNRQA Trigger: GGCCTGTCGGTTCTGCTGTTTAATGATGGGACCCAAGGGCGGCTCAATCACCTGTGCGGTGCTGACTTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CAA 90 bp | TTGACTTTTCACAAAGTCAGCACCGCACAGGTGATTGAGCCGCCCTaGGGTCCCATCATTAAACAGCAGAACCGACAGGCCCCGGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LTFHKVSTAQVIEPP*GPIIKQQNRQAPGE Trigger: TTCTCCCGGGGCCTGTCGGTTCTGCTGTTTAATGATGGGACCCAAGGGCGGCTCAATCACCTGTGCGGTGCTGACTTTGTGAAAAGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CAA 90 bp | CACCAGGTCATTGATTGCCTCTTGGAGTCCTGGTGGAGTGACTGCTaGTCTCTCAGCATCCGTGGTGCTAATAACTCTCCTGTCCGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: HQVIDCLLESWWSDC*SLSIRGANNSPVRD Trigger: GTCGCGGACAGGAGAGTTATTAGCACCACGGATGCTGAGAGACAAGCAGTCACTCCACCAGGACTCCAAGAGGCAATCAATGACCTGGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CCA 72 bp | CTTCACCAGGTCATTGATTGCCTCTTGGAGTCCTGGTaGAGTGACTGCTTGTCTCTCAGCATCCGTGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LHQVIDCLLESW*SDCLSLSIRGA Trigger: AGCACCACGGATGCTGAGAGACAAGCAGTCACTCCACCAGGACTCCAAGAGGCAATCAATGACCTGGTGAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS TCA 72 bp | AAAGTTTCTCACTGCTGGGCCTGGTGTCTCTGGCAATaGCTACGAAGGCGGTCTGTGTCAGATCCACAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: KVSHCWAWCLWQ*LRRRSVSDPQL Trigger: AAGCTGTGGATCTGACACAGACCGCCTTCGTAGTCATTGCCAGAGACACCAGGCCCAGCAGTGAGAAACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CAA 90 bp | GCATCTCTCACCGGACTTCATTTCAATTCCCTGTGGGGGTTTCTGTaGACTTTTCACAAAGTCAGCACCGCACAGGTGATTGAGCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ASLTGLHFNSLWGFL*TFHKVSTAQVIEPP Trigger: GGGCGGCTCAATCACCTGTGCGGTGCTGACTTTGTGAAAAGTCAACAGAAACCCCCACAGGGAATTGAAATGAAGTCCGGTGAGAGATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CAA 90 bp | AGCTCGGGCAAGTGTGTATTTCTTCACCAGGTCATTGATTGCCTCTaGGAGTCCTGGTGGAGTGACTGCTTGTCTCTCAGCATCCGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSGKCVFLHQVIDCL*ESWWSDCLSLSIRG Trigger: ACCACGGATGCTGAGAGACAAGCAGTCACTCCACCAGGACTCCAAGAGGCAATCAATGACCTGGTGAAGAAATACACACTTGCCCGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CAA 90 bp | GGCCGTACAAAAGCTCGGGCAAGTGTGTATTTCTTCACCAGGTCATaGATTGCCTCTTGGAGTCCTGGTGGAGTGACTGCTTGTCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GRTKARASVYFFTRS*IASWSPGGVTACLS Trigger: TGAGAGACAAGCAGTCACTCCACCAGGACTCCAAGAGGCAATCAATGACCTGGTGAAGAAATACACACTTGCCCGAGCTTTTGTACGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CCA 72 bp | TTTCTTCACCAGGTCATTGATTGCCTCTTGGAGTCCTaGTGGAGTGACTGCTTGTCTCTCAGCATCCGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: FLHQVIDCLLES*WSDCLSLSIRG Trigger: ACCACGGATGCTGAGAGACAAGCAGTCACTCCACCAGGACTCCAAGAGGCAATCAATGACCTGGTGAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS TCA 72 bp | CGCAGGACAGCTAGCAATCCCATTCGAAACATGATATaGTCGAGATGCTGGGCATTGGTCCGAAATCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRTASNPIRNMI*SRCWALVRNPA Trigger: TGCTGGATTTCGGACCAATGCCCAGCATCTCGATCATATCATGTTTCGAATGGGATTGCTAGCTGTCCTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS TCA 72 bp | CAAGGCCCCTATGCCGTTGGCACAGTCAACCTTAACTaGCCTCTTTACATCTCCACTGCAGGAAACCTGATT | + |
|
Preference number: 6 (lower is better) Translates to: QGPYAVGTVNLN*PLYISTAGNLI Trigger: AATCAGGTTTCCTGCAGTGGAGATGTAAAGAGGTCAGTTAAGGTTGACTGTGCCAACGGCATAGGGGCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS GCA 72 bp | GAGGCCGTAACCATGACTCCAATGGTAGATCTTGTTTaGTTTGACCGCAGGACAGCTAGCAATCCCATTCGA | + |
|
Preference number: 6 (lower is better) Translates to: EAVTMTPMVDLV*FDRRTASNPIR Trigger: TCGAATGGGATTGCTAGCTGTCCTGCGGTCAAAGCAAACAAGATCTACCATTGGAGTCATGGTTACGGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS GCA 72 bp | GTCATTGATTGCCTCTTGGAGTCCTGGTGGAGTGACTaGTTGTCTCTCAGCATCCGTGGTGCTAATAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: VIDCLLESWWSD*LSLSIRGANNS Trigger: AGAGTTATTAGCACCACGGATGCTGAGAGACAAGCAGTCACTCCACCAGGACTCCAAGAGGCAATCAATGAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CAA 72 bp | ATTGATTGCCTCTTGGAGTCCTGGTGGAGTGACTGCTaGTCTCTCAGCATCCGTGGTGCTAATAACTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: IDCLLESWWSDC*SLSIRGANNSP Trigger: AGGAGAGTTATTAGCACCACGGATGCTGAGAGACAAGCAGTCACTCCACCAGGACTCCAAGAGGCAATCAAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CAA 72 bp | AAAGCTCGGGCAAGTGTGTATTTCTTCACCAGGTCATaGATTGCCTCTTGGAGTCCTGGTGGAGTGACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: KARASVYFFTRS*IASWSPGGVTA Trigger: AGCAGTCACTCCACCAGGACTCCAAGAGGCAATCAATGACCTGGTGAAGAAATACACACTTGCCCGAGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CAA 90 bp | GAAGGGGCCAACATTTCCCCCAAAGGATCAACCAATTTCACACCATaGTCTTCCTCAGGGTTATGTGAGGCCGTAACCATGACTCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: EGANISPKGSTNFTP*SSSGLCEAVTMTPM Trigger: CATTGGAGTCATGGTTACGGCCTCACATAACCCTGAGGAAGACAATGGTGTGAAATTGGTTGATCCTTTGGGGGAAATGTTGGCCCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS TCA 72 bp | TTGACCGCAGGACAGCTAGCAATCCCATTCGAAACATaGTATGATCGAGATGCTGGGCATTGGTCCGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: LTAGQLAIPFET*YDRDAGHWSEI Trigger: GATTTCGGACCAATGCCCAGCATCTCGATCATATCATGTTTCGAATGGGATTGCTAGCTGTCCTGCGGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS GCA 72 bp | TTCTTCAAGGTACCGCGTGGAACTTCCATTTGCATATaGTGTCTGTACGACTCCGAGGTTCACACTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FFKVPRGTSICI*CLYDSEVHTFS Trigger: GGAGAAAGTGTGAACCTCGGAGTCGTACAGACAGCATATGCAAATGGAAGTTCCACGCGGTACCTTGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CCA 72 bp | GCAGCATCTCTCACCGGACTTCATTTCAATTCCCTGTaGGGGTTTCTGTTGACTTTTCACAAAGTCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: AASLTGLHFNSL*GFLLTFHKVST Trigger: GGTGCTGACTTTGTGAAAAGTCAACAGAAACCCCCACAGGGAATTGAAATGAAGTCCGGTGAGAGATGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CCA 72 bp | AGTGTGTATTTCTTCACCAGGTCATTGATTGCCTCTTaGAGTCCTGGTGGAGTGACTGCTTGTCTCTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SVYFFTRSLIAS*SPGGVTACLSA Trigger: TGCTGAGAGACAAGCAGTCACTCCACCAGGACTCCAAGAGGCAATCAATGACCTGGTGAAGAAATACACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CAA 72 bp | AAGTGTGTATTTCTTCACCAGGTCATTGATTGCCTCTaGGAGTCCTGGTGGAGTGACTGCTTGTCTCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KCVFLHQVIDCL*ESWWSDCLSLS Trigger: GCTGAGAGACAAGCAGTCACTCCACCAGGACTCCAAGAGGCAATCAATGACCTGGTGAAGAAATACACACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS TCA 72 bp | ACTCACTTCATAGGCAAGCCTGTCTGCGCTTTCTTGTaGGTTGGCTTCTGCATATACTCGGACAATGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: THFIGKPVCAFL*VGFCIYSDNVF Trigger: GAAGACATTGTCCGAGTATATGCAGAAGCCAACTCACAAGAAAGCGCAGACAGGCTTGCCTATGAAGTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CCA 72 bp | CTTCATAGGCAAGCCTGTCTGCGCTTTCTTGTGAGTTaGCTTCTGCATATACTCGGACAATGTCTTCAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LHRQACLRFLVS*LLHILGQCLQY Trigger: GTACTGAAGACATTGTCCGAGTATATGCAGAAGCCAACTCACAAGAAAGCGCAGACAGGCTTGCCTATGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS TCA 72 bp | TTAACTGACCTCTTTACATCTCCACTGCAGGAAACCTaGTTCGTAAGGTCTACGAAAGCCTTGGAGAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LTDLFTSPLQET*FVRSTKALESF Trigger: GAAGCTCTCCAAGGCTTTCGTAGACCTTACGAATCAGGTTTCCTGCAGTGGAGATGTAAAGAGGTCAGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS GCA 72 bp | TATCTTGTCTCCATCTATGAGATGAAAGTGACCATCTaGATCACAGTAGTAATACACGATCCTGTCCGCATC | + |
|
Preference number: 6 (lower is better) Translates to: YLVSIYEMKVTI*ITVVIHDPVRI Trigger: GATGCGGACAGGATCGTGTATTACTACTGTGATGCAGATGGTCACTTTCATCTCATAGATGGAGACAAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||
| CDS CAA 90 bp | TGTTCCATGCCCGTTCGCTTCAAAATAAACTCCGATGTCAAACTCTaGAGCCTTGTGATGCAAATGTTTAACACCAGTTTTGGTGCAATA | + |
|
Preference number: 6 (lower is better) Translates to: CSMPVRFKINSDVKL*SLVMQMFNTSFGAI Trigger: TATTGCACCAAAACTGGTGTTAAACATTTGCATCACAAGGCTCAAGAGTTTGACATCGGAGTTTATTTTGAAGCGAACGGGCATGGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070064.11 ENSMUST00000072585.8 |
||