Pregenerated sensors for PGM2L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030729Ensembl transcript IDs: ENSMUST00000054436.9, ENSMUST00000084935.11, ENSMUST00000162108.8
Found 274 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATaGAGTAGCACCCCTCCATGGCTGGCCTCTGCTTCAGTTTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: PWAGGPGCYQKADKP*SSTPPWLASASVSA Trigger: GGCTGAAACTGAAGCAGAGGCCAGCCATGGAGGGGTGCTACTTCATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
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| 3UTR GCA 90 bp | TTTACTCGTGACTTAGAGGCTCCCCCATGGGCTCTCATGTCCCTGTaGGGCTTCTTTGGGTTTTGCTCTCAAGGCCCGTTCCTCATCCTG | + |
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Preference number: 1 (lower is better) Translates to: FTRDLEAPPWALMSL*GFFGFCSQGPFLIL Trigger: CAGGATGAGGAACGGGCCTTGAGAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCTAAGTCACGAGTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
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| 3UTR CCA 90 bp | CTTAGAGGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTaGGTTTTGCTCTCAAGGCCCGTTCCTCATCCTGTTCACATTCTT | + |
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Preference number: 1 (lower is better) Translates to: LRGSPMGSHVPVRLL*VLLSRPVPHPVHIL Trigger: AAGAATGTGAACAGGATGAGGAACGGGCCTTGAGAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
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| 3UTR GCA 90 bp | GCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTGGGTTTTaGTCTCAAGGCCCGTTCCTCATCCTGTTCACATTCTTCTACTTT | + |
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Preference number: 1 (lower is better) Translates to: APPWALMSLCGFFGF*SQGPFLILFTFFYF Trigger: AAAGTAGAAGAATGTGAACAGGATGAGGAACGGGCCTTGAGAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
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| 3UTR TCA 90 bp | AGGGCTGTGACGGCAGGAATATGCCACCAAGCTGGGTTTCTAATTTaGAAAACAGGCAGGAACAGTACTCCCAGCCACAAACACACAAAC | + |
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Preference number: 1 (lower is better) Translates to: RAVTAGICHQAGFLI*KTGRNSTPSHKHTN Trigger: GTTTGTGTGTTTGTGGCTGGGAGTACTGTTCCTGCCTGTTTTTCAAATTAGAAACCCAGCTTGGTGGCATATTCCTGCCGTCACAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR TCA 90 bp | AGTTATCATTCCAAGGTCGAGACCCACAGGCTGGCATGCCTATCTTaGGCTGTTATTAAATTTAGCCTGTTAGGCACCTGTGCACCCACT | + |
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Preference number: 1 (lower is better) Translates to: SYHSKVETHRLACLS*AVIKFSLLGTCAPT Trigger: AGTGGGTGCACAGGTGCCTAACAGGCTAAATTTAATAACAGCTCAAGATAGGCATGCCAGCCTGTGGGTCTCGACCTTGGAATGATAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR GCA 90 bp | CAGGCTTGCTGTCTGAGCATCCTAACAAACACAAGTAAACAGCCTTaGATACAGTTTACCCACCATTACGGTGCATGTTTGCACGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: QACCLSILTNTSKQP*IQFTHHYGACLHVS Trigger: GGAGACGTGCAAACATGCACCGTAATGGTGGGTAAACTGTATGCAAGGCTGTTTACTTGTGTTTGTTAGGATGCTCAGACAGCAAGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR TCA 90 bp | AAGCTCATCTTTATAGTTTACTGTAGAGAACTGAGAATTTACTCGTaGCTTAGAGGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTT | + |
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Preference number: 1 (lower is better) Translates to: KLIFIVYCRELRIYS*LRGSPMGSHVPVRL Trigger: AAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCTAAGTCACGAGTAAATTCTCAGTTCTCTACAGTAAACTATAAAGATGAGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
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| 3UTR CCA 90 bp | ATATTTCATACACTTTTGTCAGTTGCTCCATCAGTGTTACCTTCCTaGTATCCAGGAAAGAGGCCATCTCAGCAACAACAGCAGCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: IFHTLLSVAPSVLPS*YPGKRPSQQQQQLH Trigger: GTGCAGCTGCTGTTGTTGCTGAGATGGCCTCTTTCCTGGATACCAGGAAGGTAACACTGATGGAGCAACTGACAAAAGTGTATGAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
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| 3UTR TCA 90 bp | AGTGGAATTTGTATTTTTCAAGTTTACAAATATCAGTGGGAAGTCTaGGAACAGCAGCAGAAGCCGCAGGAGACTCCCACTTGCGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: SGICIFQVYKYQWEV*EQQQKPQETPTCVS Trigger: AGAGACGCAAGTGGGAGTCTCCTGCGGCTTCTGCTGCTGTTCTCAGACTTCCCACTGATATTTGTAAACTTGAAAAATACAAATTCCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR TCA 90 bp | AAACTGACCTTTAACTCACAGCCAATTCTCCTGCCTCTCCAGGGCTaGGATTATACATATGAGTTATCACAACCAGCTCTCTTCAACTCC | + |
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Preference number: 1 (lower is better) Translates to: KLTFNSQPILLPLQG*DYTYELSQPALFNS Trigger: GGAGTTGAAGAGAGCTGGTTGTGATAACTCATATGTATAATCTCAGCCCTGGAGAGGCAGGAGAATTGGCTGTGAGTTAAAGGTCAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR GCA 90 bp | ACATACAGTAAATATACACCACACCAAGGGCACCCGAAACACTGGTaGCAAACCACAGACGGTAACATCTGTCCTAAATCAGAAAACCTA | + |
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Preference number: 1 (lower is better) Translates to: TYSKYTPHQGHPKHW*QTTDGNICPKSENL Trigger: TAGGTTTTCTGATTTAGGACAGATGTTACCGTCTGTGGTTTGGCACCAGTGTTTCGGGTGCCCTTGGTGTGGTGTATATTTACTGTATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR CCA 90 bp | AAAAGCCCACAGTGTCGCCATCTAGTGGTGTCCAGCAACCAGAAATaGGCTTTGAAAGACACTGAAGTTACTTCATATAGTGCATCTCAA | + |
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Preference number: 1 (lower is better) Translates to: KSPQCRHLVVSSNQK*ALKDTEVTSYSASQ Trigger: TTGAGATGCACTATATGAAGTAACTTCAGTGTCTTTCAAAGCCCATTTCTGGTTGCTGGACACCACTAGATGGCGACACTGTGGGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR CCA 90 bp | TGTACTCTTATTTCCCAGAGCACAGAGAACCCCCAACAAAATCCTTaGTCAGCTCATTACTTTGGTTGGTATATCTGTTTCCTCATCAGT | + |
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Preference number: 1 (lower is better) Translates to: CTLISQSTENPQQNP*SAHYFGWYICFLIS Trigger: ACTGATGAGGAAACAGATATACCAACCAAAGTAATGAGCTGACCAAGGATTTTGTTGGGGGTTCTCTGTGCTCTGGGAAATAAGAGTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR GCA 90 bp | GTAAACAGCCTTGCATACAGTTTACCCACCATTACGGTGCATGTTTaGACGTCTCCAGCATTTTTATACCATCATTACTGGCCTTTATAT | + |
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Preference number: 1 (lower is better) Translates to: VNSLAYSLPTITVHV*TSPAFLYHHYWPLY Trigger: ATATAAAGGCCAGTAATGATGGTATAAAAATGCTGGAGACGTGCAAACATGCACCGTAATGGTGGGTAAACTGTATGCAAGGCTGTTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR TCA 90 bp | CTTTTGGTCATGGTGTTCATCACAGCAATAGAATCCCTAAGACAATaGGTATTTAAAGGGTGTGCATGCTTAGTAAACACTGCTTACTGG | + |
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Preference number: 1 (lower is better) Translates to: LLVMVFITAIESLRQ*VFKGCACLVNTAYW Trigger: CCAGTAAGCAGTGTTTACTAAGCATGCACACCCTTTAAATACTCATTGTCTTAGGGATTCTATTGCTGTGATGAACACCATGACCAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
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| 3UTR GCA 90 bp | TGTGTTCAAGTCTCATACAGCTTGAAAATTAAAGAGAACGCTCACTaGTGCACCCATGTGTTTCCCATTCAAAATATATACAAGTTATTG | + |
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Preference number: 1 (lower is better) Translates to: CVQVSYSLKIKENAH*CTHVFPIQNIYKLL Trigger: CAATAACTTGTATATATTTTGAATGGGAAACACATGGGTGCAGCAGTGAGCGTTCTCTTTAATTTTCAAGCTGTATGAGACTTGAACACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR TCA 90 bp | ATCAGTATTGTCTCCTATAGGCAACTTTTCTTAAATGATTATACCTaGAGGCCTTGCTACTGTTATCATAACTGTAGTGTGTGTATTCTG | + |
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Preference number: 1 (lower is better) Translates to: ISIVSYRQLFLNDYT*RPCYCYHNCSVCIL Trigger: CAGAATACACACACTACAGTTATGATAACAGTAGCAAGGCCTTCAGGTATAATCATTTAAGAAAAGTTGCCTATAGGAGACAATACTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR GCA 90 bp | GTGAGAGGCAGACAATGTGCCATTCTCTTCTATTTTAAGCTTGCTTaGTCTATCTATCTATCTATCTATCTATCTATCTATCTTATTGGT | + |
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Preference number: 1 (lower is better) Translates to: VRGRQCAILFYFKLA*SIYLSIYLSIYLIG Trigger: ACCAATAAGATAGATAGATAGATAGATAGATAGATAGATAGAGCAAGCAAGCTTAAAATAGAAGAGAATGGCACATTGTCTGCCTCTCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR-3UTR GCA 90 bp | GTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGGGCTTCTTTGGGTTTTaGTCTCAAGGCCCGTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: VPALGGWSWVLSESRQAMGFFGF*SQGPFL Trigger: GAGGAACGGGCCTTGAGAGCAAAACCCAAAGAAGCC...CATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCATGGCTGGCCTCTGCTTCAGTTTCAGCCTCCCGGTTCTTGACCTGAGTTCGAGACCCACAGGCTaGCATGCCTATCTTGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: PSMAGLCFSFSLPVLDLSSRPTG*HAYLEL Trigger: CAGCTCAAGATAGGCATGCCAGCCTGTGGGTCTCGA...ACTCAGGTCAAGAACCGGGAGGCTGAAACTGAAGCAGAGGCCAGCCATGGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCATGGCTGGCCTCTGCTTCAGTTTCAGCCTCCCGGTTCTTGACCTGAGTGGGTGGGGGTGGGGCTaGGAATTTAGGAATTACGTA | + |
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Preference number: 2 (lower is better) Translates to: PSMAGLCFSFSLPVLDLSGWGWG*EFRNYV Trigger: TACGTAATTCCTAAATTCCCAGCCCCACCCCCACCC...ACTCAGGTCAAGAACCGGGAGGCTGAAACTGAAGCAGAGGCCAGCCATGGAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
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| 3UTR-3UTR GCA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGTGACGGCAGGAATATaGCACCAAGCTGGGTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: SASPGRVVLGVIRKQTSHVTAGI*HQAGFL Trigger: TAGAAACCCAGCTTGGTGGCATATTCCTGCCGTCAC...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR-3UTR GCA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGAGAACGCTCACTGCTaGACCCATGTGTTTCCCATT | + |
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Preference number: 2 (lower is better) Translates to: SASPGRVVLGVIRKQTSHENAHC*THVFPI Trigger: AATGGGAAACACATGGGTGCAGCAGTGAGCGTTCTC...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR CAA 90 bp | GGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTGGGTTTaGCTCTCAAGGCCCGTTCCTCATCCTGTTCACATTCTTCTACTT | + |
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Preference number: 2 (lower is better) Translates to: GSPMGSHVPVRLLWV*LSRPVPHPVHILLL Trigger: AAGTAGAAGAATGTGAACAGGATGAGGAACGGGCCTTGAGAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAGGAAAGAGGCCATCTCAGCAACAACAGCAGCTGCACTCACTCCATCTTTGATTCTCCTGAAGTTCTaGCACAGCCAGCCGGTCGGC | + |
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Preference number: 2 (lower is better) Translates to: SRKEAISATTAAALTPSLILLKF*HSQPVG Trigger: GCCGACCGGCTGGCTGTGGCAGAACTTCAGGAGAAT...CAAAGATGGAGTGAGTGCAGCTGCTGTTGTTGCTGAGATGGCCTCTTTCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATCTTTTGTACTGTTTGTaGTACAGGAAGAACAGCGTG | + |
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Preference number: 2 (lower is better) Translates to: SASPGRVVLGVIRKQTSHLLYCL*YRKNSV Trigger: CACGCTGTTCTTCCTGTATCACAAACAGTACAAAAG...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR-3UTR TCA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATTATTCTCTTCACAAGTaGATAGCAATCATGGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: SASPGRVVLGVIRKQTSHYSLHK*IAIMAW Trigger: CCACGCCATGATTGCTATTCACTTGTGAAGAGAATA...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR-3UTR GCA 90 bp | TGTTACCTTCCTGGTATCCAGGAAAGAGGCCATCTCAGCAACAACAGCAGCTGCGGCTTCTTTGGGTTTTaGTCTCAAGGCCCGTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: CYLPGIQERGHLSNNSSCGFFGF*SQGPFL Trigger: GAGGAACGGGCCTTGAGAGCAAAACCCAAAGAAGCC...GCAGCTGCTGTTGTTGCTGAGATGGCCTCTTTCCTGGATACCAGGAAGGTAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCATGGCTGGCCTCTGCTTCAGTTTCAGCCTCCCGGTTCTTGACCTGAGTAAGCTTTGCTTCATCTaGATGCTAGGTACGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: PSMAGLCFSFSLPVLDLSKLCFI*MLGTCF Trigger: AAAGCACGTACCTAGCATGCAGATGAAGCAAAGCTT...ACTCAGGTCAAGAACCGGGAGGCTGAAACTGAAGCAGAGGCCAGCCATGGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGGAAGGTAGTGTCACTCTGGCCAGGCGATGCACACATCTCTGCATAATACCTGTGCGGCTTCTTTaGGTTTTGCTCTCAAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: FQEGSVTLARRCTHLCIIPVRLL*VLLSRP Trigger: GGGCCTTGAGAGCAAAACCCAAAGAAGCCGCACAGG...TATTATGCAGAGATGTGTGCATCGCCTGGCCAGAGTGACACTACCTTCCTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATCAAATTCTCACAGGCTaGCAATATACCCTGTTATCT | + |
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Preference number: 2 (lower is better) Translates to: SASPGRVVLGVIRKQTSHQILTG*QYTLLS Trigger: AGATAACAGGGTATATTGTCAGCCTGTGAGAATTTG...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
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| 3UTR-3UTR CCA 90 bp | CTACACAGAGCGCCAGACCAGTGCGTTCTTACTGGGCTCAAGAAAATTCTCTATCGGCATCAGGATCTGTaGCTAGCACTATCCGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: LHRAPDQCVLTGLKKILYRHQDL*LALSGH Trigger: ATGCCCGGATAGTGCTAGCCACAGATCCTGATGCCG...ATAGAGAATTTTCTTGAGCCCAGTAAGAACGCACTGGTCTGGCGCTCTGTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATAAAAATAATAAACCATaGTCTTTGCTCTCAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SASPGRVVLGVIRKQTSHKNNKP*SLLSGS Trigger: GCTGCCTGAGAGCAAAGATCATGGTTTATTATTTTT...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCATGGCTGGCCTCTGCTTCAGTTTCAGCCTCCCGGTTCTTGACCTGAGTACAAGGGCACAATTCTaGGCTACTATTAGAAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: PSMAGLCFSFSLPVLDLSTRAQF*ATIRKV Trigger: TACTTTTCTAATAGTAGCTCAGAATTGTGCCCTTGT...ACTCAGGTCAAGAACCGGGAGGCTGAAACTGAAGCAGAGGCCAGCCATGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCATGGCTGGCCTCTGCTTCAGTTTCAGCCTCCCGGTTCTTGACCTGAGTGCAACTTTTCTTAAATaGTTATACCTGAAGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: PSMAGLCFSFSLPVLDLSATFLK*LYLKAL Trigger: CAAGGCCTTCAGGTATAATCATTTAAGAAAAGTTGC...ACTCAGGTCAAGAACCGGGAGGCTGAAACTGAAGCAGAGGCCAGCCATGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR-3UTR TCA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATTTAAAGCCATCTGAATaGACAGTTAAGACTCGTATC | + |
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Preference number: 2 (lower is better) Translates to: SASPGRVVLGVIRKQTSHLKPSE*TVKTRI Trigger: GATACGAGTCTTAACTGTTCATTCAGATGGCTTTAA...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR CAA 90 bp | AAAGAGGCCATCTCAGCAACAACAGCAGCTGCACTCACTCCATCTTaGTCCAACACGGAGGTTCCACACAGAAAGCCAATAGACTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: KEAISATTAAALTPS*SNTEVPHRKPIDSS Trigger: TGAAGAGTCTATTGGCTTTCTGTGTGGAACCTCCGTGTTGGACAAAGATGGAGTGAGTGCAGCTGCTGTTGTTGCTGAGATGGCCTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCTTAGAGGCTCCCCCATaGGCTCTCATGTCCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: ADERILTQGSLSGVLEGFLEAPP*ALMSLC Trigger: GCACAGGGACATGAGAGCCCATGGGGGAGCCTCTAA...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
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| 3UTR CAA 90 bp | AAGGGCTGTGACGGCAGGAATATGCCACCAAGCTGGGTTTCTAATTaGAAAAACAGGCAGGAACAGTACTCCCAGCCACAAACACACAAA | + |
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Preference number: 2 (lower is better) Translates to: KGCDGRNMPPSWVSN*KNRQEQYSQPQTHK Trigger: TTTGTGTGTTTGTGGCTGGGAGTACTGTTCCTGCCTGTTTTTCAAATTAGAAACCCAGCTTGGTGGCATATTCCTGCCGTCACAGCCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR CAA 90 bp | CCCATTCTCCCAGATGAACGCCAGTGTGTTCAAGTCTCATACAGCTaGAAAATTAAAGAGAACGCTCACTGCTGCACCCATGTGTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: PILPDERQCVQVSYS*KIKENAHCCTHVFP Trigger: GGGAAACACATGGGTGCAGCAGTGAGCGTTCTCTTTAATTTTCAAGCTGTATGAGACTTGAACACACTGGCGTTCATCTGGGAGAATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
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| 3UTR-3UTR TCA 90 bp | TTCCAGGAAGGTAGTGTCACTCTGGCCAGGCGATGCACACATCTCTGCATAATAACTCACAGGCAGTACTaGTTTCTTATTTGGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: FQEGSVTLARRCTHLCIITHRQY*FLIWLA Trigger: AGCCAGCCAAATAAGAAATCAGTACTGCCTGTGAGT...TATTATGCAGAGATGTGTGCATCGCCTGGCCAGAGTGACACTACCTTCCTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCCCTGTGCGGCTTCTTTaGGTTTTGCTCTCAAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: ADERILTQGSLSGVLEGFPVRLL*VLLSRP Trigger: GGGCCTTGAGAGCAAAACCCAAAGAAGCCGCACAGG...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
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| 3UTR-3UTR CCA 90 bp | CTACACAGAGCGCCAGACCAGTGCGTTCTTACTGGGCTCAAGAAAATTCTCTATTCAGTGTTACCTTCCTaGTATCCAGGAAAGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LHRAPDQCVLTGLKKILYSVLPS*YPGKRP Trigger: TGGCCTCTTTCCTGGATACCAGGAAGGTAACACTGA...ATAGAGAATTTTCTTGAGCCCAGTAAGAACGCACTGGTCTGGCGCTCTGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
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| 3UTR-3UTR GCA 90 bp | TATAAGATCATTATGTGTTCTTCCAGGAAAAAGCAGCAATTGCAGGTCGGGGGTGGCTTCTTTGGGTTTTaGTCTCAAGGCCCGTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: YKIIMCSSRKKQQLQVGGGFFGF*SQGPFL Trigger: GAGGAACGGGCCTTGAGAGCAAAACCCAAAGAAGCC...ACCCCCGACCTGCAATTGCTGCTTTTTCCTGGAAGAACACATAATGATCTTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR-3UTR CCA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTCCTGTGCGGCTTCTTTaGGTTTTGCTCTCAAGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: FCTVCDTGRTACHWNTFIPVRLL*VLLSRP Trigger: GGGCCTTGAGAGCAAAACCCAAAGAAGCCGCACAGG...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| 3UTR-3UTR CCA 90 bp | TATCCAGGAAAGAGGCCATCTCAGCAACAACAGCAGCTGCACTCACTCCATCTTCTTCACATCGGCGTTTaGTTTGTTTTTCTTCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: YPGKRPSQQQQQLHSLHLLHIGV*FVFLPA Trigger: TGCTGGAAGAAAAACAAACCAAACGCCGATGTGAAG...AAGATGGAGTGAGTGCAGCTGCTGTTGTTGCTGAGATGGCCTCTTTCCTGGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| 3UTR-3UTR TCA 90 bp | CTACACAGAGCGCCAGACCAGTGCGTTCTTACTGGGCTCAAGAAAATTCTCTATATCTATTTAGCCAGCTaGACACAGGAAAGAAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LHRAPDQCVLTGLKKILYIYLAS*TQERKG Trigger: CCCTTTTCTTTCCTGTGTTCAGCTGGCTAAATAGAT...ATAGAGAATTTTCTTGAGCCCAGTAAGAACGCACTGGTCTGGCGCTCTGTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTTACAAATATCAGTGGGAAGTCTGAGAACAGCAGCAGAAGCCGCAGGAGAATCTATTTAGCCAGCTaGACACAGGAAAGAAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: KFTNISGKSENSSRSRRRIYLAS*TQERKG Trigger: CCCTTTTCTTTCCTGTGTTCAGCTGGCTAAATAGAT...TCTCCTGCGGCTTCTGCTGCTGTTCTCAGACTTCCCACTGATATTTGTAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR-3UTR TCA 90 bp | CTACACAGAGCGCCAGACCAGTGCGTTCTTACTGGGCTCAAGAAAATTCTCTATTTTTTGTACTGTTTGTaGTACAGGAAGAACAGCGTG | + |
|
Preference number: 2 (lower is better) Translates to: LHRAPDQCVLTGLKKILYFLYCL*YRKNSV Trigger: CACGCTGTTCTTCCTGTATCACAAACAGTACAAAAA...ATAGAGAATTTTCTTGAGCCCAGTAAGAACGCACTGGTCTGGCGCTCTGTGTAG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCGTTCCCACTAGACCCTaGGAATGCACTGAGGAATTT | + |
|
Preference number: 2 (lower is better) Translates to: ADERILTQGSLSGVLEGFVPTRP*ECTEEF Trigger: AAATTCCTCAGTGCATTCTCAGGGTCTAGTGGGAAC...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTTACAAATATCAGTGGGAAGTCTGAGAACAGCAGCAGAAGCCGCAGGAGAAATGAGATTGGGTATTaGATCAAGGTAGTGTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: KFTNISGKSENSSRSRRRNEIGY*IKVVWL Trigger: CAGCCACACTACCTTGATTCAATACCCAATCTCATT...TCTCCTGCGGCTTCTGCTGCTGTTCTCAGACTTCCCACTGATATTTGTAAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR-3UTR GCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCACTCTGGCCAGGCGATaGACACATCTCTGCATAATA | + |
|
Preference number: 2 (lower is better) Translates to: ADERILTQGSLSGVLEGFTLARR*THLCII Trigger: TATTATGCAGAGATGTGTGCATCGCCTGGCCAGAGT...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAGTAATCTATAATATAGTCTCACCATATACAGATGCAGACTCACCCCTCTTTTTAGAGGCTCCCCCATaGGCTCTCATGTCCCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: IVIYNIVSPYTDADSPLFLEAPP*ALMSLC Trigger: GCACAGGGACATGAGAGCCCATGGGGGAGCCTCTAA...AAAGAGGGGTGAGTCTGCATCTGTATATGGTGAGACTATATTATAGATTACTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR-3UTR CCA 90 bp | ATAGTAATCTATAATATAGTCTCACCATATACAGATGCAGACTCACCCCTCTTTGGGCACCCGAAACACTaGTGCCAAACCACAGACGGT | + |
|
Preference number: 2 (lower is better) Translates to: IVIYNIVSPYTDADSPLFGHPKH*CQTTDG Trigger: ACCGTCTGTGGTTTGGCACCAGTGTTTCGGGTGCCC...AAAGAGGGGTGAGTCTGCATCTGTATATGGTGAGACTATATTATAGATTACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR-3UTR CCA 90 bp | TGCAACCTTATTCCCTGTGGTGTCTTCACTAGAGATAATCAGGGTGCCACTACTTTTTCATTTTGTCCTTaGGCCACTGAGACACAGACA | + |
|
Preference number: 2 (lower is better) Translates to: CNLIPCGVFTRDNQGATTFSFCP*ATETQT Trigger: TGTCTGTGTCTCAGTGGCCCAAGGACAAAATGAAAA...AGTAGTGGCACCCTGATTATCTCTAGTGAAGACACCACAGGGAATAAGGTTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR CAA 90 bp | AAGAGACAGTGGTGGCTAGCATGTAAACATTCTTCACATCGGCGTTaGGTTTGTTTTTCTTCCAGCAATCAAACATCCACCACCCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: KRQWWLACKHSSHRR*VCFSSSNQTSTTQT Trigger: TGTTTGGGTGGTGGATGTTTGATTGCTGGAAGAAAAACAAACCAAACGCCGATGTGAAGAATGTTTACATGCTAGCCACCACTGTCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTTACAAATATCAGTGGGAAGTCTGAGAACAGCAGCAGAAGCCGCAGGAGAATAGGTTATGATAACTaGATCCTAGCAGGAAGACTC | + |
|
Preference number: 2 (lower is better) Translates to: KFTNISGKSENSSRSRRRIGYDN*ILAGRL Trigger: GAGTCTTCCTGCTAGGATTCAGTTATCATAACCTAT...TCTCCTGCGGCTTCTGCTGCTGTTCTCAGACTTCCCACTGATATTTGTAAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTTACAAATATCAGTGGGAAGTCTGAGAACAGCAGCAGAAGCCGCAGGAGAACAAGTAAACAGCCTTaGATACAGTTTACCCACCAT | + |
|
Preference number: 2 (lower is better) Translates to: KFTNISGKSENSSRSRRRTSKQP*IQFTHH Trigger: ATGGTGGGTAAACTGTATGCAAGGCTGTTTACTTGT...TCTCCTGCGGCTTCTGCTGCTGTTCTCAGACTTCCCACTGATATTTGTAAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR CAA 90 bp | TTGTACTCTTATTTCCCAGAGCACAGAGAACCCCCAACAAAATCCTaGGTCAGCTCATTACTTTGGTTGGTATATCTGTTTCCTCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: LYSYFPEHREPPTKS*VSSLLWLVYLFPHQ Trigger: CTGATGAGGAAACAGATATACCAACCAAAGTAATGAGCTGACCAAGGATTTTGTTGGGGGTTCTCTGTGCTCTGGGAAATAAGAGTACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR-3UTR TCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCATCTATTTAGCCAGCTaGACACAGGAAAGAAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: ADERILTQGSLSGVLEGFIYLAS*TQERKG Trigger: CCCTTTTCTTTCCTGTGTTCAGCTGGCTAAATAGAT...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| 3UTR-3UTR TCA 90 bp | TATAAGATCATTATGTGTTCTTCCAGGAAAAAGCAGCAATTGCAGGTCGGGGGTGCTGGGTTTCTAATTTaGAAAACAGGCAGGAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: YKIIMCSSRKKQQLQVGGAGFLI*KTGRNS Trigger: ACTGTTCCTGCCTGTTTTTCAAATTAGAAACCCAGC...ACCCCCGACCTGCAATTGCTGCTTTTTCCTGGAAGAACACATAATGATCTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTTACAAATATCAGTGGGAAGTCTGAGAACAGCAGCAGAAGCCGCAGGAGAACTCTAGCTATGGTGTaGAATGCAAAAGTTACTGAT | + |
|
Preference number: 2 (lower is better) Translates to: KFTNISGKSENSSRSRRRTLAMV*NAKVTD Trigger: ATCAGTAACTTTTGCATTTCACACCATAGCTAGAGT...TCTCCTGCGGCTTCTGCTGCTGTTCTCAGACTTCCCACTGATATTTGTAAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR-3UTR GCA 90 bp | TGCAACCTTATTCCCTGTGGTGTCTTCACTAGAGATAATCAGGGTGCCACTACTAAGGGTAACATATATTaGAGGCCAATTAATCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: CNLIPCGVFTRDNQGATTKGNIY*RPINLA Trigger: TGCCAGATTAATTGGCCTGCAATATATGTTACCCTT...AGTAGTGGCACCCTGATTATCTCTAGTGAAGACACCACAGGGAATAAGGTTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTTACAAATATCAGTGGGAAGTCTGAGAACAGCAGCAGAAGCCGCAGGAGAATAGCAATCATGGCGTaGCTTTCTTGTTATAAACAG | + |
|
Preference number: 2 (lower is better) Translates to: KFTNISGKSENSSRSRRRIAIMA*LSCYKQ Trigger: CTGTTTATAACAAGAAAGCCACGCCATGATTGCTAT...TCTCCTGCGGCTTCTGCTGCTGTTCTCAGACTTCCCACTGATATTTGTAAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR CAA 90 bp | AGTAAACAGCCTTGCATACAGTTTACCCACCATTACGGTGCATGTTaGCACGTCTCCAGCATTTTTATACCATCATTACTGGCCTTTATA | + |
|
Preference number: 2 (lower is better) Translates to: SKQPCIQFTHHYGAC*HVSSIFIPSLLAFI Trigger: TATAAAGGCCAGTAATGATGGTATAAAAATGCTGGAGACGTGCAAACATGCACCGTAATGGTGGGTAAACTGTATGCAAGGCTGTTTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR-3UTR TCA 90 bp | TATAAGATCATTATGTGTTCTTCCAGGAAAAAGCAGCAATTGCAGGTCGGGGGTTTTTTGTACTGTTTGTaGTACAGGAAGAACAGCGTG | + |
|
Preference number: 2 (lower is better) Translates to: YKIIMCSSRKKQQLQVGGFLYCL*YRKNSV Trigger: CACGCTGTTCTTCCTGTATCACAAACAGTACAAAAA...ACCCCCGACCTGCAATTGCTGCTTTTTCCTGGAAGAACACATAATGATCTTATA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000054436.9 |
||
| 3UTR-3UTR GCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCTCTTATTTGGCTGGCTaGTATCATATCCAGTGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: ADERILTQGSLSGVLEGFSYLAG*YHIQWL Trigger: TAACCACTGGATATGATAGCAGCCAGCCAAATAAGA...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCAACCTTATTCCCTGTGGTGTCTTCACTAGAGATAATCAGGGTGCCACTACTAATATGCCACCAAGCTaGGTTTCTAATTTGAAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: CNLIPCGVFTRDNQGATTNMPPS*VSNLKN Trigger: GTTTTTCAAATTAGAAACCCAGCTTGGTGGCATATT...AGTAGTGGCACCCTGATTATCTCTAGTGAAGACACCACAGGGAATAAGGTTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR-3UTR GCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCAAGGGTAACATATATTaGAGGCCAATTAATCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: ADERILTQGSLSGVLEGFKGNIY*RPINLA Trigger: TGCCAGATTAATTGGCCTGCAATATATGTTACCCTT...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
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| 3UTR-3UTR GCA 90 bp | ATAGTAATCTATAATATAGTCTCACCATATACAGATGCAGACTCACCCCTCTTTCCTCAGTCAGGAAAATaGTCCCATCAGATTGGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: IVIYNIVSPYTDADSPLFPQSGK*SHQIGL Trigger: CAAGCCAATCTGATGGGAGCATTTTCCTGACTGAGG...AAAGAGGGGTGAGTCTGCATCTGTATATGGTGAGACTATATTATAGATTACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
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| 3UTR-3UTR GCA 90 bp | ATAGTAATCTATAATATAGTCTCACCATATACAGATGCAGACTCACCCCTCTTTCCTTTCTTCCCAAGCTaGTTTTGGTCATGGTGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: IVIYNIVSPYTDADSPLFPFFPS*FWSWCS Trigger: TGAACACCATGACCAAAAGCAGCTTGGGAAGAAAGG...AAAGAGGGGTGAGTCTGCATCTGTATATGGTGAGACTATATTATAGATTACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR-3UTR GCA 90 bp | ATAGTAATCTATAATATAGTCTCACCATATACAGATGCAGACTCACCCCTCTTTAGCCATGAGGAGTGCTaGCACTACTGTTTTATGTTC | + |
|
Preference number: 2 (lower is better) Translates to: IVIYNIVSPYTDADSPLFSHEEC*HYCFMF Trigger: GAACATAAAACAGTAGTGGCAGCACTCCTCATGGCT...AAAGAGGGGTGAGTCTGCATCTGTATATGGTGAGACTATATTATAGATTACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR-3UTR CCA 90 bp | ATAGTAATCTATAATATAGTCTCACCATATACAGATGCAGACTCACCCCTCTTTTTCCCAAGCTGCTTTTaGTCATGGTGTTCATCACAG | + |
|
Preference number: 2 (lower is better) Translates to: IVIYNIVSPYTDADSPLFFPSCF*SWCSSQ Trigger: CTGTGATGAACACCATGACCAAAAGCAGCTTGGGAA...AAAGAGGGGTGAGTCTGCATCTGTATATGGTGAGACTATATTATAGATTACTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR-3UTR TCA 90 bp | ATAGTAATCTATAATATAGTCTCACCATATACAGATGCAGACTCACCCCTCTTTGAATCCCTAAGACAATaGGTATTTAAAGGGTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: IVIYNIVSPYTDADSPLFESLRQ*VFKGCA Trigger: TGCACACCCTTTAAATACTCATTGTCTTAGGGATTC...AAAGAGGGGTGAGTCTGCATCTGTATATGGTGAGACTATATTATAGATTACTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR CAA 90 bp | GCTACAGAGTCAACCACAAATGACTTTCCTGAAAACTGTTTCGCATaGAAAAAGATGAAACGTATTTATATGATCAGAAATTCCAAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: ATESTTNDFPENCFA*KKMKRIYMIRNSKA Trigger: GGCTTTGGAATTTCTGATCATATAAATACGTTTCATCTTTTTCAATGCGAAACAGTTTTCAGGAAAGTCATTTGTGGTTGACTCTGTAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR-3UTR GCA 90 bp | ATAGTAATCTATAATATAGTCTCACCATATACAGATGCAGACTCACCCCTCTTTCCACCAGTTAAATACTaGATAACAGGAGATACTGAA | + |
|
Preference number: 2 (lower is better) Translates to: IVIYNIVSPYTDADSPLFPPVKY*ITGDTE Trigger: TTCAGTATCTCCTGTTATGCAGTATTTAACTGGTGG...AAAGAGGGGTGAGTCTGCATCTGTATATGGTGAGACTATATTATAGATTACTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR-3UTR CAA 90 bp | GTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGCCCTGTGCGGCTTCTTaGGGTTTTGCTCTCAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: VPALGGWSWVLSESRQAMPCAAS*GFALKA Trigger: GGCCTTGAGAGCAAAACCCAAAGAAGCCGCACAGGG...CATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR GCA 72 bp | GACTTAGAGGCTCCCCCATGGGCTCTCATGTCCCTGTaGGGCTTCTTTGGGTTTTGCTCTCAAGGCCCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: DLEAPPWALMSL*GFFGFCSQGPF Trigger: GAACGGGCCTTGAGAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCTAAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| 3UTR CCA 72 bp | TCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTaGGTTTTGCTCTCAAGGCCCGTTCCTCATCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SPMGSHVPVRLL*VLLSRPVPHPV Trigger: AACAGGATGAGGAACGGGCCTTGAGAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCCATGGCTGGCCTCTGCTTCAGTTTCAGCCTCCCGGTTCTTGACCTGAGTCTTCCCAAGCTGCTTTaGGTCATGGTGTTCATCACA | + |
|
Preference number: 3 (lower is better) Translates to: PSMAGLCFSFSLPVLDLSLPKLL*VMVFIT Trigger: TGTGATGAACACCATGACCAAAAGCAGCTTGGGAAG...ACTCAGGTCAAGAACCGGGAGGCTGAAACTGAAGCAGAGGCCAGCCATGGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCCATGGCTGGCCTCTGCTTCAGTTTCAGCCTCCCGGTTCTTGACCTGAGTAGACTCACCCCTCTTTaGTGTCTAAGTGTCTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: PSMAGLCFSFSLPVLDLSRLTPL*CLSVSN Trigger: ATTGGAGACACTTAGACACAAAAGAGGGGTGAGTCT...ACTCAGGTCAAGAACCGGGAGGCTGAAACTGAAGCAGAGGCCAGCCATGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATCCCTCTCCTACCCATTaGTCTCACTTTTCAACTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SASPGRVVLGVIRKQTSHPSPTH*SHFSTS Trigger: ACTAGTTGAAAAGTGAGACAAATGGGTAGGAGAGGG...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR TCA 72 bp | TCATTTCCTGTGAAAACTTTCCAACGGCCATTCTCCTaGAGTTCTGCCACAGCCAGCCGGTCGGCATCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SFPVKTFQRPFS*SSATASRSASG Trigger: TCCTGATGCCGACCGGCTGGCTGTGGCAGAACTTCAGGAGAATGGCCGTTGGAAAGTTTTCACAGGAAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATTATATTCCCATGCTATaGCTGAAAAGAGGGATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SASPGRVVLGVIRKQTSHYIPML*LKRGMR Trigger: TCTCATCCCTCTTTTCAGCAATAGCATGGGAATATA...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATAAGGGAAAAGATAACTaGGCAGATGAGAGAATTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SASPGRVVLGVIRKQTSHKGKDN*ADERIL Trigger: TAGAATTCTCTCATCTGCCAAGTTATCTTTTCCCTT...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATCTGAGAACGTTTCATTaGGTTAAAACCACAGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: SASPGRVVLGVIRKQTSHLRTFH*VKTTEI Trigger: GATTTCTGTGGTTTTAACCAAATGAAACGTTCTCAG...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCCATGGCTGGCCTCTGCTTCAGTTTCAGCCTCCCGGTTCTTGACCTGAGTGAACTCAATAGCTTTTaGTTTCAGAGTCCAACAATC | + |
|
Preference number: 3 (lower is better) Translates to: PSMAGLCFSFSLPVLDLSELNSF*FQSPTI Trigger: GATTGTTGGACTCTGAAACAAAAAGCTATTGAGTTC...ACTCAGGTCAAGAACCGGGAGGCTGAAACTGAAGCAGAGGCCAGCCATGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR TCA 72 bp | TCCAAGGTCGAGACCCACAGGCTGGCATGCCTATCTTaGGCTGTTATTAAATTTAGCCTGTTAGGCACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SKVETHRLACLS*AVIKFSLLGTC Trigger: ACAGGTGCCTAACAGGCTAAATTTAATAACAGCTCAAGATAGGCATGCCAGCCTGTGGGTCTCGACCTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTCCCTGTGCGGCTTCTTaGGGTTTTGCTCTCAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: FCTVCDTGRTACHWNTFIPCAAS*GFALKA Trigger: GGCCTTGAGAGCAAAACCCAAAGAAGCCGCACAGGG...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| 3UTR-3UTR CAA 90 bp | TATCCAGGAAAGAGGCCATCTCAGCAACAACAGCAGCTGCACTCACTCCATCTTTCTTCACATCGGCGTTaGGTTTGTTTTTCTTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: YPGKRPSQQQQQLHSLHLSSHRR*VCFSSS Trigger: GCTGGAAGAAAAACAAACCAAACGCCGATGTGAAGA...AAGATGGAGTGAGTGCAGCTGCTGTTGTTGCTGAGATGGCCTCTTTCCTGGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| 3UTR GCA 72 bp | AAATATACACCACACCAAGGGCACCCGAAACACTGGTaGCAAACCACAGACGGTAACATCTGTCCTAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: KYTPHQGHPKHW*QTTDGNICPKS Trigger: TGATTTAGGACAGATGTTACCGTCTGTGGTTTGGCACCAGTGTTTCGGGTGCCCTTGGTGTGGTGTATATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR CCA 72 bp | ACACTTTTGTCAGTTGCTCCATCAGTGTTACCTTCCTaGTATCCAGGAAAGAGGCCATCTCAGCAACAACAG | + |
|
Preference number: 3 (lower is better) Translates to: TLLSVAPSVLPS*YPGKRPSQQQQ Trigger: CTGTTGTTGCTGAGATGGCCTCTTTCCTGGATACCAGGAAGGTAACACTGATGGAGCAACTGACAAAAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| 3UTR-3UTR CAA 90 bp | CTACACAGAGCGCCAGACCAGTGCGTTCTTACTGGGCTCAAGAAAATTCTCTATACATCGGCGTTTGGTTaGTTTTTCTTCCAGCAATCA | + |
|
Preference number: 3 (lower is better) Translates to: LHRAPDQCVLTGLKKILYTSAFG*FFFQQS Trigger: TGATTGCTGGAAGAAAAACAAACCAAACGCCGATGT...ATAGAGAATTTTCTTGAGCCCAGTAAGAACGCACTGGTCTGGCGCTCTGTGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| 3UTR TCA 72 bp | CAGATGAACGCCAGTGTGTTCAAGTCTCATACAGCTTaGAAATTAAAGAGAACGCTCACTGCTGCACCCATG | + |
|
Preference number: 3 (lower is better) Translates to: QMNASVFKSHTA*KLKRTLTAAPM Trigger: CATGGGTGCAGCAGTGAGCGTTCTCTTTAATTTTCAAGCTGTATGAGACTTGAACACACTGGCGTTCATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR TCA 72 bp | TTTATAGTTTACTGTAGAGAACTGAGAATTTACTCGTaGCTTAGAGGCTCCCCCATGGGCTCTCATGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FIVYCRELRIYS*LRGSPMGSHVP Trigger: AGGGACATGAGAGCCCATGGGGGAGCCTCTAAGTCACGAGTAAATTCTCAGTTCTCTACAGTAAACTATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| 3UTR TCA 72 bp | TGTATTTTTCAAGTTTACAAATATCAGTGGGAAGTCTaGGAACAGCAGCAGAAGCCGCAGGAGACTCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: CIFQVYKYQWEV*EQQQKPQETPT Trigger: AGTGGGAGTCTCCTGCGGCTTCTGCTGCTGTTCTCAGACTTCCCACTGATATTTGTAAACTTGAAAAATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR TCA 72 bp | TTTAACTCACAGCCAATTCTCCTGCCTCTCCAGGGCTaGGATTATACATATGAGTTATCACAACCAGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FNSQPILLPLQG*DYTYELSQPAL Trigger: GAGAGCTGGTTGTGATAACTCATATGTATAATCTCAGCCCTGGAGAGGCAGGAGAATTGGCTGTGAGTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR GCA 72 bp | GTATTGCCAGGGATCAAATGTAAGCTTTGCTTCATCTaGATGCTAGGTACGTGCTTTACCACTGAGCTATGT | + |
|
Preference number: 3 (lower is better) Translates to: VLPGIKCKLCFI*MLGTCFTTELC Trigger: ACATAGCTCAGTGGTAAAGCACGTACCTAGCATGCAGATGAAGCAAAGCTTACATTTGATCCCTGGCAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR CCA 72 bp | CAGTGTCGCCATCTAGTGGTGTCCAGCAACCAGAAATaGGCTTTGAAAGACACTGAAGTTACTTCATATAGT | + |
|
Preference number: 3 (lower is better) Translates to: QCRHLVVSSNQK*ALKDTEVTSYS Trigger: ACTATATGAAGTAACTTCAGTGTCTTTCAAAGCCCATTTCTGGTTGCTGGACACCACTAGATGGCGACACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR GCA 72 bp | CTTGCATACAGTTTACCCACCATTACGGTGCATGTTTaGACGTCTCCAGCATTTTTATACCATCATTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: LAYSLPTITVHV*TSPAFLYHHYW Trigger: CCAGTAATGATGGTATAAAAATGCTGGAGACGTGCAAACATGCACCGTAATGGTGGGTAAACTGTATGCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR GCA 72 bp | TGTCTGAGCATCCTAACAAACACAAGTAAACAGCCTTaGATACAGTTTACCCACCATTACGGTGCATGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: CLSILTNTSKQP*IQFTHHYGACL Trigger: CAAACATGCACCGTAATGGTGGGTAAACTGTATGCAAGGCTGTTTACTTGTGTTTGTTAGGATGCTCAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR CCA 72 bp | ATTTCCCAGAGCACAGAGAACCCCCAACAAAATCCTTaGTCAGCTCATTACTTTGGTTGGTATATCTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ISQSTENPQQNP*SAHYFGWYICF Trigger: GAAACAGATATACCAACCAAAGTAATGAGCTGACCAAGGATTTTGTTGGGGGTTCTCTGTGCTCTGGGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR-3UTR CAA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCAGCTGGGTTTCTAATTaGAAAAACAGGCAGGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: ADERILTQGSLSGVLEGFSWVSN*KNRQEQ Trigger: CTGTTCCTGCCTGTTTTTCAAATTAGAAACCCAGCT...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR TCA 72 bp | GAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTaGAGGTTTCGTTCCATATGTCAGTGCAGAGTCATA | + |
|
Preference number: 3 (lower is better) Translates to: ENSNTRFTEWSS*RFRSICQCRVI Trigger: TATGACTCTGCACTGACATATGGAACGAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| 3UTR TCA 72 bp | TCTCAGGCAGCTGACAGGTGGGTTAAGGAGTGTCAGTaGATTAAACAAAATCAATTGCCTTATACATCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SQAADRWVKECQ*IKQNQLPYTSD Trigger: GTCTGATGTATAAGGCAATTGATTTTGTTTAATTCACTGACACTCCTTAACCCACCTGTCAGCTGCCTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR GCA 72 bp | CACTTTTGTACTGTTTGTGATACAGGAAGAACAGCGTaGCACTGGAACACTTTCATTGTAATGACTGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: HFCTVCDTGRTA*HWNTFIVMTVT Trigger: AGTGACAGTCATTACAATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR GCA 72 bp | AAATGTAAGCTTTGCTTCATCTGCATGCTAGGTACGTaGTTTACCACTGAGCTATGTTCCAGCCTAATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: KCKLCFICMLGT*FTTELCSSLIL Trigger: AAGAATTAGGCTGGAACATAGCTCAGTGGTAAAGCACGTACCTAGCATGCAGATGAAGCAAAGCTTACATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTGTCCAACACGGAGGTTCCACACAGAAAGCCAATAGACTCTTCAAATGCAAAGGGAAAAGATAACTaGGCAGATGAGAGAATTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SLSNTEVPHRKPIDSSNAKGKDN*ADERIL Trigger: TAGAATTCTCTCATCTGCCAAGTTATCTTTTCCCTT...TGCATTTGAAGAGTCTATTGGCTTTCTGTGTGGAACCTCCGTGTTGGACAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTAAGGGAAAAGATAACTaGGCAGATGAGAGAATTCTA | + |
|
Preference number: 3 (lower is better) Translates to: FCTVCDTGRTACHWNTFIKGKDN*ADERIL Trigger: TAGAATTCTCTCATCTGCCAAGTTATCTTTTCCCTT...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTGGTAAATGTAATCATTaGGCTGTTTTTACTCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: FCTVCDTGRTACHWNTFIGKCNH*AVFTHR Trigger: CCTGTGAGTAAAAACAGCCAAATGATTACATTTACC...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| 3UTR GCA 72 bp | GAAAGATGCTTTGTACTCGTCAAAGAAACAGCGTGCTaGATAGGTTTATATCAACTTGACACAAAAGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: ERCFVLVKETAC*IGLYQLDTKAS Trigger: ACTAGCTTTTGTGTCAAGTTGATATAAACCTATGCAGCACGCTGTTTCTTTGACGAGTACAAAGCATCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR GCA 72 bp | GTTGAAAGATGCTTTGTACTCGTCAAAGAAACAGCGTaGTGCATAGGTTTATATCAACTTGACACAAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VERCFVLVKETA*CIGLYQLDTKA Trigger: AGCTTTTGTGTCAAGTTGATATAAACCTATGCAGCACGCTGTTTCTTTGACGAGTACAAAGCATCTTTCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR TCA 72 bp | ATGGTGTTCATCACAGCAATAGAATCCCTAAGACAATaGGTATTTAAAGGGTGTGCATGCTTAGTAAACACT | + |
|
Preference number: 3 (lower is better) Translates to: MVFITAIESLRQ*VFKGCACLVNT Trigger: AGTGTTTACTAAGCATGCACACCCTTTAAATACTCATTGTCTTAGGGATTCTATTGCTGTGATGAACACCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR TCA 72 bp | ATAGGACAGAGTTTTTCACTTATAGGTTATGATAACTaGATCCTAGCAGGAAGACTCAGCTACAGTTACATT | + |
|
Preference number: 3 (lower is better) Translates to: IGQSFSLIGYDN*ILAGRLSYSYI Trigger: AATGTAACTGTAGCTGAGTCTTCCTGCTAGGATTCAGTTATCATAACCTATAAGTGAAAAACTCTGTCCTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR TCA 72 bp | TACAAGTTATTGGTGAGCCAAACTCTAGCTATGGTGTaGAATGCAAAAGTTACTGATAGATCTCTATTCATA | + |
|
Preference number: 3 (lower is better) Translates to: YKLLVSQTLAMV*NAKVTDRSLFI Trigger: TATGAATAGAGATCTATCAGTAACTTTTGCATTTCACACCATAGCTAGAGTTTGGCTCACCAATAACTTGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR CCA 72 bp | TTACTACATGCAGACATCACAAAGTATCCAATCTCTTaGACTCTCTTAAGTTACTATATCCAAATGCTGATA | + |
|
Preference number: 3 (lower is better) Translates to: LLHADITKYPIS*TLLSYYIQMLI Trigger: TATCAGCATTTGGATATAGTAACTTAAGAGAGTCCAAGAGATTGGATACTTTGTGATGTCTGCATGTAGTAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | AGAGGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTGGGTTTTGCTCGCAGCCACTGCCCGATaGCCGTGTCTAGCTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGSPMGSHVPVRLLWVLLAATAR*PCLAGG Trigger: ACCCCCAGCTAGACACGGCCATCGGGCAGTGGCTGC...GAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCCATGGCTGGCCTCTGCTTCAGTTTCAGCCTCCCGGTTCTTGACCTGAGTGCAGCCACTGCCCGATaGCCGTGTCTAGCTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSMAGLCFSFSLPVLDLSAATAR*PCLAGG Trigger: ACCCCCAGCTAGACACGGCCATCGGGCAGTGGCTGC...ACTCAGGTCAAGAACCGGGAGGCTGAAACTGAAGCAGAGGCCAGCCATGGAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | GTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGATTCTCCTGAAGTTCTaGCACAGCCAGCCGGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPALGGWSWVLSESRQAMILLKF*HSQPVG Trigger: GCCGACCGGCTGGCTGTGGCAGAACTTCAGGAGAAT...CATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATATTCTCCTGAAGTTCTaGCACAGCCAGCCGGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SASPGRVVLGVIRKQTSHILLKF*HSQPVG Trigger: GCCGACCGGCTGGCTGTGGCAGAACTTCAGGAGAAT...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR TCA 90 bp | GTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGCACCTGCAACTGCTTTaGGCTCCTGAACGGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: VPALGGWSWVLSESRQAMHLQLL*APERHM Trigger: CATATGCCGTTCAGGAGCTCAAAGCAGTTGCAGGTG...CATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | TCCAGGAAAGAGGCCATCTCAGCAACAACAGCAGCTGCACTCACTCCATCTTTGGCAGCCACTGCCCGATaGCCGTGTCTAGCTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRKEAISATTAAALTPSLAATAR*PCLAGG Trigger: ACCCCCAGCTAGACACGGCCATCGGGCAGTGGCTGC...CAAAGATGGAGTGAGTGCAGCTGCTGTTGTTGCTGAGATGGCCTCTTTCCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATCGGCATCAGGATCTGTaGCTAGCACTATCCGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SASPGRVVLGVIRKQTSHRHQDL*LALSGH Trigger: ATGCCCGGATAGTGCTAGCCACAGATCCTGATGCCG...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | AGAGGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTGGGTTTTGCTCAAAACCCTGCTCCCATaGCAGATCGAAGTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGSPMGSHVPVRLLWVLLKTLLP*QIEVLQ Trigger: CTGCAGGACTTCGATCTGCCATGGGAGCAGGGTTTT...GAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR TCA 90 bp | GTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGACTGCTTTGAGCTCCTaGACGGCATATGGTACGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VPALGGWSWVLSESRQAMTALSS*TAYGTK Trigger: TTTCGTACCATATGCCGTTCAGGAGCTCAAAGCAGT...CATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | AGAGGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTGGGTTTTGCTCGATGTAGCAAAACCCTaGTCCCATGGCAGATCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGSPMGSHVPVRLLWVLLDVAKP*SHGRSK Trigger: CTTCGATCTGCCATGGGAGCAGGGTTTTGCTACATC...GAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR GCA 90 bp | GTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGCCACCCAAACAAAGCTaGCAGCTCATTTCCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPALGGWSWVLSESRQAMPPKQS*QLISCE Trigger: TTCACAGGAAATGAGCTGGCAGCTTTGTTTGGGTGG...CATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | GTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGACTCTGGCCAGGCGATaGACACATCTCTGCATAATA | + |
|
Preference number: 4 (lower is better) Translates to: VPALGGWSWVLSESRQAMTLARR*THLCII Trigger: TATTATGCAGAGATGTGTGCATCGCCTGGCCAGAGT...CATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR TCA 90 bp | GTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGCCATGGAAGGAGGTATaGACAAATTTCAAGGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VPALGGWSWVLSESRQAMPWKEV*TNFKVV Trigger: GACCACCTTGAAATTTGTTCATACCTCCTTCCATGG...CATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR TCA 90 bp | AGAGGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTGGGTTTTGCTCCCAGCTCATTTCCTGTaGAAACTTTCCAACGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGSPMGSHVPVRLLWVLLPAHFL*KLSNGH Trigger: ATGGCCGTTGGAAAGTTTTCACAGGAAATGAGCTGG...GAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | AGAGGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTGGGTTTTGCTCAGCAACAACAGCAGCTaGACTCACTCCATCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGSPMGSHVPVRLLWVLLSNNSS*THSIFV Trigger: GACAAAGATGGAGTGAGTGCAGCTGCTGTTGTTGCT...GAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | AGAGGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTGGGTTTTGCTCACTCTGGCCAGGCGATaGACACATCTCTGCATAATA | + |
|
Preference number: 4 (lower is better) Translates to: RGSPMGSHVPVRLLWVLLTLARR*THLCII Trigger: TATTATGCAGAGATGTGTGCATCGCCTGGCCAGAGT...GAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR TCA 90 bp | CCCTCCATGGCTGGCCTCTGCTTCAGTTTCAGCCTCCCGGTTCTTGACCTGAGTGTACATCCCCTGTGTTaGCTGTATTACTGTAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSMAGLCFSFSLPVLDLSVHPLC*LYYCKV Trigger: GACCTTACAGTAATACAGTCAACACAGGGGATGTAC...ACTCAGGTCAAGAACCGGGAGGCTGAAACTGAAGCAGAGGCCAGCCATGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR TCA 90 bp | CCCTCCATGGCTGGCCTCTGCTTCAGTTTCAGCCTCCCGGTTCTTGACCTGAGTACTCACAGGCAGTACTaGTTTCTTATTTGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSMAGLCFSFSLPVLDLSTHRQY*FLIWLA Trigger: AGCCAGCCAAATAAGAAATCAGTACTGCCTGTGAGT...ACTCAGGTCAAGAACCGGGAGGCTGAAACTGAAGCAGAGGCCAGCCATGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | TGCAACCTTATTCCCTGTGGTGTCTTCACTAGAGATAATCAGGGTGCCACTACTTCCCAACGCAGCCACTaGCCGATGGCCGTGTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: CNLIPCGVFTRDNQGATTSQRSH*PMAVSS Trigger: GCTAGACACGGCCATCGGGCAGTGGCTGCGTTGGGA...AGTAGTGGCACCCTGATTATCTCTAGTGAAGACACCACAGGGAATAAGGTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | GTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGTTTGCGGTTATGAGATaGAGTAATCATCACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPALGGWSWVLSESRQAMFAVMR*SNHHTC Trigger: GCAGGTGTGATGATTACTGCATCTCATAACCGCAAA...CATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | GTTCTGCCACAGCCAGCCGGTCGGCATCAGGATCTGTGGCTAGCACTATCCGGGTTCTTGCAAATGTCCTaGAGAGGATCTTTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLPQPAGRHQDLWLALSGFLQMS*RGSFFS Trigger: ACTGAAGAAAGATCCTCTGCAGGACATTTGCAAGAA...CCCGGATAGTGCTAGCCACAGATCCTGATGCCGACCGGCTGGCTGTGGCAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTGCCACAGCCAGCCGGTCGGCATCAGGATCTGTGGCTAGCACTATCCGGGCTTTCTTCAGTGGGCTaGTGTCCACTAAATTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLPQPAGRHQDLWLALSGLSSVG*CPLNYH Trigger: ATGATAATTTAGTGGACACCAGCCCACTGAAGAAAG...CCCGGATAGTGCTAGCCACAGATCCTGATGCCGACCGGCTGGCTGTGGCAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR CCA 90 bp | GTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGTTTCTGTTCTGGGACTaGAATTGGAGGCTTAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: VPALGGWSWVLSESRQAMFLFWD*NWRLKT Trigger: GGTTTTAAGCCTCCAATTCCAGTCCCAGAACAGAAA...CATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR CAA 72 bp | CTGAGAACAGCAGCAGAAGCCGCAGGAGACTCCCACTaGCGTCTCTGTTGCATCAATTCCAAAAGCAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRTAAEAAGDSH*RLCCINSKSNG Trigger: CCCATTGCTTTTGGAATTGATGCAACAGAGACGCAAGTGGGAGTCTCCTGCGGCTTCTGCTGCTGTTCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| CDS-3UTR TCA 90 bp | GTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGTCTTTGCTTGAAGTCTaGAAAACATCTCTCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VPALGGWSWVLSESRQAMSLLEV*KTSLQV Trigger: TACCTGGAGAGATGTTTTTCAGACTTCAAGCAAAGA...CATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | GTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGTTCTTGCAAATGTCCTaGAGAGGATCTTTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VPALGGWSWVLSESRQAMFLQMS*RGSFFS Trigger: ACTGAAGAAAGATCCTCTGCAGGACATTTGCAAGAA...CATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | GTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGTCTTATTTGGCTGGCTaGTATCATATCCAGTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VPALGGWSWVLSESRQAMSYLAG*YHIQWL Trigger: TAACCACTGGATATGATAGCAGCCAGCCAAATAAGA...CATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | AGAGGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTGGGTTTTGCTCTCTGCTCTTTTGTTTTaGGATTCTTGTCCCAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGSPMGSHVPVRLLWVLLSALLF*DSCPNA Trigger: TGCGTTGGGACAAGAATCCCAAAACAAAAGAGCAGA...GAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR CCA 90 bp | GTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGTTCTGGGACTGGAATTaGAGGCTTAAAACCAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: VPALGGWSWVLSESRQAMFWDWN*RLKTKY Trigger: GTATTTGGTTTTAAGCCTCCAATTCCAGTCCCAGAA...CATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | CCCTCCATGGCTGGCCTCTGCTTCAGTTTCAGCCTCCCGGTTCTTGACCTGAGTCTTCACATCGGCGTTTaGTTTGTTTTTCTTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSMAGLCFSFSLPVLDLSLHIGV*FVFLPA Trigger: TGCTGGAAGAAAAACAAACCAAACGCCGATGTGAAG...ACTCAGGTCAAGAACCGGGAGGCTGAAACTGAAGCAGAGGCCAGCCATGGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATCTTCACATCGGCGTTTaGTTTGTTTTTCTTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SASPGRVVLGVIRKQTSHLHIGV*FVFLPA Trigger: TGCTGGAAGAAAAACAAACCAAACGCCGATGTGAAG...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR TCA 90 bp | CCCTCCATGGCTGGCCTCTGCTTCAGTTTCAGCCTCCCGGTTCTTGACCTGAGTTCTTTGCTTGAAGTCTaGAAAACATCTCTCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PSMAGLCFSFSLPVLDLSSLLEV*KTSLQV Trigger: TACCTGGAGAGATGTTTTTCAGACTTCAAGCAAAGA...ACTCAGGTCAAGAACCGGGAGGCTGAAACTGAAGCAGAGGCCAGCCATGGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR TCA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATCAAAGCCTCTTTGCTTaGAGTCTGAAAAACATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SASPGRVVLGVIRKQTSHQSLFA*SLKNIS Trigger: AGAGATGTTTTTCAGACTTCAAGCAAAGAGGCTTTG...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR TCA 90 bp | AGAGGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTGGGTTTTGCTCCAAAGCCTCTTTGCTTaGAGTCTGAAAAACATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGSPMGSHVPVRLLWVLLQSLFA*SLKNIS Trigger: AGAGATGTTTTTCAGACTTCAAGCAAAGAGGCTTTG...GAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR GCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCTCCCAACGCAGCCACTaGCCGATGGCCGTGTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ADERILTQGSLSGVLEGFSQRSH*PMAVSS Trigger: GCTAGACACGGCCATCGGGCAGTGGCTGCGTTGGGA...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATTACACTTTTGTCAGTTaGTCCATCAGTGTTACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SASPGRVVLGVIRKQTSHYTFVS*SISVTF Trigger: GAAGGTAACACTGATGGAGCAACTGACAAAAGTGTA...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATCGATGCACACATCTCTaGATAATACTTTATCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SASPGRVVLGVIRKQTSHRCTHL*IILYLR Trigger: CCGAAGATAAAGTATTATGCAGAGATGTGTGCATCG...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | CCCTCCATGGCTGGCCTCTGCTTCAGTTTCAGCCTCCCGGTTCTTGACCTGAGTCGATGCACACATCTCTaGATAATACTTTATCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PSMAGLCFSFSLPVLDLSRCTHL*IILYLR Trigger: CCGAAGATAAAGTATTATGCAGAGATGTGTGCATCG...ACTCAGGTCAAGAACCGGGAGGCTGAAACTGAAGCAGAGGCCAGCCATGGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | ACAGAGCGCCAGACCAGTGCGTTCTTACTGGGCTCAAGAAAATTCTCTATCAGCAAAACCCTGCTCCCATaGCAGATCGAAGTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TERQTSAFLLGSRKFSISKTLLP*QIEVLQ Trigger: CTGCAGGACTTCGATCTGCCATGGGAGCAGGGTTTT...GCTGATAGAGAATTTTCTTGAGCCCAGTAAGAACGCACTGGTCTGGCGCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGGAAGGTAGTGTCACTCTGGCCAGGCGATGCACACATCTCTGCATAATAAGTTTAGCAAGCCTCTaGCTGCTGCAGCTGCTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FQEGSVTLARRCTHLCIISLASL*LLQLLV Trigger: GACTAGCAGCTGCAGCAGCCAGAGGCTTGCTAAACT...TATTATGCAGAGATGTGTGCATCGCCTGGCCAGAGTGACACTACCTTCCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCCATGGCTGGCCTCTGCTTCAGTTTCAGCCTCCCGGTTCTTGACCTGAGTCTTTCTTCAGTGGGCTaGTGTCCACTAAATTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSMAGLCFSFSLPVLDLSLSSVG*CPLNYH Trigger: ATGATAATTTAGTGGACACCAGCCCACTGAAGAAAG...ACTCAGGTCAAGAACCGGGAGGCTGAAACTGAAGCAGAGGCCAGCCATGGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGCGACACAGCCGTTTTaGAAGGTAAATGTAATCATT | + |
|
Preference number: 4 (lower is better) Translates to: SASPGRVVLGVIRKQTSHATQPF*KVNVII Trigger: AATGATTACATTTACCTTCCAAAACGGCTGTGTCGC...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR TCA 90 bp | TGTTACCTTCCTGGTATCCAGGAAAGAGGCCATCTCAGCAACAACAGCAGCTGCACTGCTTTGAGCTCCTaGACGGCATATGGTACGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CYLPGIQERGHLSNNSSCTALSS*TAYGTK Trigger: TTTCGTACCATATGCCGTTCAGGAGCTCAAAGCAGT...GCAGCTGCTGTTGTTGCTGAGATGGCCTCTTTCCTGGATACCAGGAAGGTAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR TCA 90 bp | CTACACAGAGCGCCAGACCAGTGCGTTCTTACTGGGCTCAAGAAAATTCTCTATCACCTGCAACTGCTTTaGGCTCCTGAACGGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: LHRAPDQCVLTGLKKILYHLQLL*APERHM Trigger: CATATGCCGTTCAGGAGCTCAAAGCAGTTGCAGGTG...ATAGAGAATTTTCTTGAGCCCAGTAAGAACGCACTGGTCTGGCGCTCTGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR GCA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTTCCCAACGCAGCCACTaGCCGATGGCCGTGTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCTVCDTGRTACHWNTFISQRSH*PMAVSS Trigger: GCTAGACACGGCCATCGGGCAGTGGCTGCGTTGGGA...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGAAAGAGGCCATCTCAGCAACAACAGCAGCTGCACTCACTCCATCTTTGGTACATCCCCTGTGTTaGCTGTATTACTGTAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SRKEAISATTAAALTPSLVHPLC*LYYCKV Trigger: GACCTTACAGTAATACAGTCAACACAGGGGATGTAC...CAAAGATGGAGTGAGTGCAGCTGCTGTTGTTGCTGAGATGGCCTCTTTCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGAACAAATTTCAAGGTaGTCTTTGAATTTAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SASPGRVVLGVIRKQTSHEQISR*SLNLSP Trigger: GGGACTTAAATTCAAAGACCACCTTGAAATTTGTTC...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | CCCTCCATGGCTGGCCTCTGCTTCAGTTTCAGCCTCCCGGTTCTTGACCTGAGTGGTTTTGATGGTAGGTaGATCATAACACAAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: PSMAGLCFSFSLPVLDLSGFDGR*IITQEI Trigger: TATTTCTTGTGTTATGATCCACCTACCATCAAAACC...ACTCAGGTCAAGAACCGGGAGGCTGAAACTGAAGCAGAGGCCAGCCATGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGTAAATGTAATCATTTaGCTGTTTTTACTCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SASPGRVVLGVIRKQTSHVNVII*LFLLTG Trigger: GCCTGTGAGTAAAAACAGCCAAATGATTACATTTAC...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR CAA 72 bp | GACGGCAGGAATATGCCACCAAGCTGGGTTTCTAATTaGAAAAACAGGCAGGAACAGTACTCCCAGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: DGRNMPPSWVSN*KNRQEQYSQPQ Trigger: TTGTGGCTGGGAGTACTGTTCCTGCCTGTTTTTCAAATTAGAAACCCAGCTTGGTGGCATATTCCTGCCGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR CAA 72 bp | ATCTCAGCAACAACAGCAGCTGCACTCACTCCATCTTaGTCCAACACGGAGGTTCCACACAGAAAGCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: ISATTAAALTPS*SNTEVPHRKPI Trigger: TATTGGCTTTCTGTGTGGAACCTCCGTGTTGGACAAAGATGGAGTGAGTGCAGCTGCTGTTGTTGCTGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR GCA 90 bp | TGCAACCTTATTCCCTGTGGTGTCTTCACTAGAGATAATCAGGGTGCCACTACTGATGTAGCAAAACCCTaGTCCCATGGCAGATCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CNLIPCGVFTRDNQGATTDVAKP*SHGRSK Trigger: CTTCGATCTGCCATGGGAGCAGGGTTTTGCTACATC...AGTAGTGGCACCCTGATTATCTCTAGTGAAGACACCACAGGGAATAAGGTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| CDS-3UTR TCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCCACCTGCAACTGCTTTaGGCTCCTGAACGGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: ADERILTQGSLSGVLEGFHLQLL*APERHM Trigger: CATATGCCGTTCAGGAGCTCAAAGCAGTTGCAGGTG...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTTACAAATATCAGTGGGAAGTCTGAGAACAGCAGCAGAAGCCGCAGGAGAACTCACAGGCAGTACTaGTTTCTTATTTGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KFTNISGKSENSSRSRRRTHRQY*FLIWLA Trigger: AGCCAGCCAAATAAGAAATCAGTACTGCCTGTGAGT...TCTCCTGCGGCTTCTGCTGCTGTTCTCAGACTTCCCACTGATATTTGTAAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTAGTTTAGCAAGCCTCTaGCTGCTGCAGCTGCTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FCTVCDTGRTACHWNTFISLASL*LLQLLV Trigger: GACTAGCAGCTGCAGCAGCCAGAGGCTTGCTAAACT...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| 3UTR CAA 72 bp | CCAGATGAACGCCAGTGTGTTCAAGTCTCATACAGCTaGAAAATTAAAGAGAACGCTCACTGCTGCACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PDERQCVQVSYS*KIKENAHCCTH Trigger: ATGGGTGCAGCAGTGAGCGTTCTCTTTAATTTTCAAGCTGTATGAGACTTGAACACACTGGCGTTCATCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| CDS-3UTR TCA 90 bp | AAGTTTACAAATATCAGTGGGAAGTCTGAGAACAGCAGCAGAAGCCGCAGGAGATCCTCTTTGCGGTTATaGGATGCAGTAATCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: KFTNISGKSENSSRSRRRSSLRL*DAVIIT Trigger: TGTGATGATTACTGCATCTCATAACCGCAAAGAGGA...TCTCCTGCGGCTTCTGCTGCTGTTCTCAGACTTCCCACTGATATTTGTAAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| CDS-3UTR TCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCCCAGCTCATTTCCTGTaGAAACTTTCCAACGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ADERILTQGSLSGVLEGFPAHFL*KLSNGH Trigger: ATGGCCGTTGGAAAGTTTTCACAGGAAATGAGCTGG...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCCCACCCAAACAAAGCTaGCAGCTCATTTCCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ADERILTQGSLSGVLEGFPPKQS*QLISCE Trigger: TTCACAGGAAATGAGCTGGCAGCTTTGTTTGGGTGG...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | TATAAGATCATTATGTGTTCTTCCAGGAAAAAGCAGCAATTGCAGGTCGGGGGTAGCAACAACAGCAGCTaGACTCACTCCATCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YKIIMCSSRKKQQLQVGGSNNSS*THSIFV Trigger: GACAAAGATGGAGTGAGTGCAGCTGCTGTTGTTGCT...ACCCCCGACCTGCAATTGCTGCTTTTTCCTGGAAGAACACATAATGATCTTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | TGCAACCTTATTCCCTGTGGTGTCTTCACTAGAGATAATCAGGGTGCCACTACTTTTCTGTTCTGGGACTaGAATTGGAGGCTTAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: CNLIPCGVFTRDNQGATTFLFWD*NWRLKT Trigger: GGTTTTAAGCCTCCAATTCCAGTCCCAGAACAGAAA...AGTAGTGGCACCCTGATTATCTCTAGTGAAGACACCACAGGGAATAAGGTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | TGCAACCTTATTCCCTGTGGTGTCTTCACTAGAGATAATCAGGGTGCCACTACTTGCTATCATATCCAGTaGTTATGTCCCGTACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CNLIPCGVFTRDNQGATTCYHIQ*LCPVHA Trigger: TGCATGTACGGGACATAACCACTGGATATGATAGCA...AGTAGTGGCACCCTGATTATCTCTAGTGAAGACACCACAGGGAATAAGGTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR CAA 72 bp | GGCTGTTTTTACTCACAGGCAGTACTGATTTCTTATTaGGCTGGCTGCTATCATATCCAGTGGTTATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GCFYSQAVLISY*AGCYHIQWLCP Trigger: GGGACATAACCACTGGATATGATAGCAGCCAGCCAAATAAGAAATCAGTACTGCCTGTGAGTAAAAACAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR TCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCGTACATCCCCTGTGTTaGCTGTATTACTGTAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ADERILTQGSLSGVLEGFVHPLC*LYYCKV Trigger: GACCTTACAGTAATACAGTCAACACAGGGGATGTAC...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR GCA 90 bp | TATCCAGGAAAGAGGCCATCTCAGCAACAACAGCAGCTGCACTCACTCCATCTTACAACAAAGCCTCTTTaGTTGAAGTCTGAAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: YPGKRPSQQQQQLHSLHLTTKPL*LKSEKH Trigger: ATGTTTTTCAGACTTCAAGCAAAGAGGCTTTGTTGT...AAGATGGAGTGAGTGCAGCTGCTGTTGTTGCTGAGATGGCCTCTTTCCTGGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR GCA 90 bp | AACATCCACCACCCAAACAAAGCTGCCAGCTCATTTCCTGTGAAAACTTTCCAATTTGCGGTTATGAGATaGAGTAATCATCACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NIHHPNKAASSFPVKTFQFAVMR*SNHHTC Trigger: GCAGGTGTGATGATTACTGCATCTCATAACCGCAAA...TTGGAAAGTTTTCACAGGAAATGAGCTGGCAGCTTTGTTTGGGTGGTGGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR GCA 90 bp | TGCAACCTTATTCCCTGTGGTGTCTTCACTAGAGATAATCAGGGTGCCACTACTTACACTTTTGTCAGTTaGTCCATCAGTGTTACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CNLIPCGVFTRDNQGATTYTFVS*SISVTF Trigger: GAAGGTAACACTGATGGAGCAACTGACAAAAGTGTA...AGTAGTGGCACCCTGATTATCTCTAGTGAAGACACCACAGGGAATAAGGTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | AGGAGTGCTGCCACTACTGTTTTATGTTCAGTAAACATCCGTCTTAAATACATAAAAACCCTGCTCCCATaGCAGATCGAAGTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSAATTVLCSVNIRLKYIKTLLP*QIEVLQ Trigger: CTGCAGGACTTCGATCTGCCATGGGAGCAGGGTTTT...TATGTATTTAAGACGGATGTTTACTGAACATAAAACAGTAGTGGCAGCACTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCTGGATCTTTCTGTTCTaGGACTGGAATTGGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ADERILTQGSLSGVLEGFWIFLF*DWNWRL Trigger: AAGCCTCCAATTCCAGTCCCAGAACAGAAAGATCCA...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | ATAGTAATCTATAATATAGTCTCACCATATACAGATGCAGACTCACCCCTCTTTCGGCATCAGGATCTGTaGCTAGCACTATCCGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IVIYNIVSPYTDADSPLFRHQDL*LALSGH Trigger: ATGCCCGGATAGTGCTAGCCACAGATCCTGATGCCG...AAAGAGGGGTGAGTCTGCATCTGTATATGGTGAGACTATATTATAGATTACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTTCAGTGTTACCTTCCTaGTATCCAGGAAAGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FCTVCDTGRTACHWNTFISVLPS*YPGKRP Trigger: TGGCCTCTTTCCTGGATACCAGGAAGGTAACACTGA...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR CAA 72 bp | CCTTGCATACAGTTTACCCACCATTACGGTGCATGTTaGCACGTCTCCAGCATTTTTATACCATCATTACTG | + |
|
Preference number: 4 (lower is better) Translates to: PCIQFTHHYGAC*HVSSIFIPSLL Trigger: CAGTAATGATGGTATAAAAATGCTGGAGACGTGCAAACATGCACCGTAATGGTGGGTAAACTGTATGCAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR CAA 72 bp | TGGTGGCTAGCATGTAAACATTCTTCACATCGGCGTTaGGTTTGTTTTTCTTCCAGCAATCAAACATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: WWLACKHSSHRR*VCFSSSNQTST Trigger: GGTGGATGTTTGATTGCTGGAAGAAAAACAAACCAAACGCCGATGTGAAGAATGTTTACATGCTAGCCACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR TCA 90 bp | TATAAGATCATTATGTGTTCTTCCAGGAAAAAGCAGCAATTGCAGGTCGGGGGTTCCTCTTTGCGGTTATaGGATGCAGTAATCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: YKIIMCSSRKKQQLQVGGSSLRL*DAVIIT Trigger: TGTGATGATTACTGCATCTCATAACCGCAAAGAGGA...ACCCCCGACCTGCAATTGCTGCTTTTTCCTGGAAGAACACATAATGATCTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | ATAGTAATCTATAATATAGTCTCACCATATACAGATGCAGACTCACCCCTCTTTAGTTTAGCAAGCCTCTaGCTGCTGCAGCTGCTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IVIYNIVSPYTDADSPLFSLASL*LLQLLV Trigger: GACTAGCAGCTGCAGCAGCCAGAGGCTTGCTAAACT...AAAGAGGGGTGAGTCTGCATCTGTATATGGTGAGACTATATTATAGATTACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTTGGATCTTTCTGTTCTaGGACTGGAATTGGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FCTVCDTGRTACHWNTFIWIFLF*DWNWRL Trigger: AAGCCTCCAATTCCAGTCCCAGAACAGAAAGATCCA...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | TATAAGATCATTATGTGTTCTTCCAGGAAAAAGCAGCAATTGCAGGTCGGGGGTCCAGTGCGTTCTTACTaGGCTCAAGAAAATTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YKIIMCSSRKKQQLQVGGPVRSY*AQENSL Trigger: TAGAGAATTTTCTTGAGCCCAGTAAGAACGCACTGG...ACCCCCGACCTGCAATTGCTGCTTTTTCCTGGAAGAACACATAATGATCTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR CAA 72 bp | TATTTCCCAGAGCACAGAGAACCCCCAACAAAATCCTaGGTCAGCTCATTACTTTGGTTGGTATATCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YFPEHREPPTKS*VSSLLWLVYLF Trigger: AAACAGATATACCAACCAAAGTAATGAGCTGACCAAGGATTTTGTTGGGGGTTCTCTGTGCTCTGGGAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| CDS-3UTR TCA 90 bp | AACATCCACCACCCAAACAAAGCTGCCAGCTCATTTCCTGTGAAAACTTTCCAATGTAGGAACGTATCTTaGGAAAAGGTAAACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NIHHPNKAASSFPVKTFQCRNVS*EKVNRN Trigger: ATTCCTGTTTACCTTTTCTCAAGATACGTTCCTACA...TTGGAAAGTTTTCACAGGAAATGAGCTGGCAGCTTTGTTTGGGTGGTGGATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR TCA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTTCCTCTTTGCGGTTATaGGATGCAGTAATCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: FCTVCDTGRTACHWNTFISSLRL*DAVIIT Trigger: TGTGATGATTACTGCATCTCATAACCGCAAAGAGGA...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR GCA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTTTTGCGGTTATGAGATaGAGTAATCATCACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FCTVCDTGRTACHWNTFIFAVMR*SNHHTC Trigger: GCAGGTGTGATGATTACTGCATCTCATAACCGCAAA...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR GCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCTTCTTGCAAATGTCCTaGAGAGGATCTTTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ADERILTQGSLSGVLEGFFLQMS*RGSFFS Trigger: ACTGAAGAAAGATCCTCTGCAGGACATTTGCAAGAA...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR CCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCTTCTGGGACTGGAATTaGAGGCTTAAAACCAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: ADERILTQGSLSGVLEGFFWDWN*RLKTKY Trigger: GTATTTGGTTTTAAGCCTCCAATTCCAGTCCCAGAA...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTAGAAAAGTCTGGATCTaGATCTTTCTGTTCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FCTVCDTGRTACHWNTFIRKVWI*IFLFWD Trigger: GTCCCAGAACAGAAAGATCCAGATCCAGACTTTTCT...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | AAGTTTACAAATATCAGTGGGAAGTCTGAGAACAGCAGCAGAAGCCGCAGGAGATCCTTCTTCAGGGTTTaGACATTTAACAGTAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KFTNISGKSENSSRSRRRSFFRV*TFNSRK Trigger: TTTTCTACTGTTAAATGTCCAAACCCTGAAGAAGGA...TCTCCTGCGGCTTCTGCTGCTGTTCTCAGACTTCCCACTGATATTTGTAAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | AAGTTTACAAATATCAGTGGGAAGTCTGAGAACAGCAGCAGAAGCCGCAGGAGAGGTTTTGATGGTAGGTaGATCATAACACAAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: KFTNISGKSENSSRSRRRGFDGR*IITQEI Trigger: TATTTCTTGTGTTATGATCCACCTACCATCAAAACC...TCTCCTGCGGCTTCTGCTGCTGTTCTCAGACTTCCCACTGATATTTGTAAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCGATTTCTTATTTGGCTaGCTGCTATCATATCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ADERILTQGSLSGVLEGFDFLFG*LLSYPV Trigger: CACTGGATATGATAGCAGCCAGCCAAATAAGAAATC...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCGCGACACAGCCGTTTTaGAAGGTAAATGTAATCATT | + |
|
Preference number: 4 (lower is better) Translates to: ADERILTQGSLSGVLEGFATQPF*KVNVII Trigger: AATGATTACATTTACCTTCCAAAACGGCTGTGTCGC...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR TCA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTCAAAGCCTCTTTGCTTaGAGTCTGAAAAACATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FCTVCDTGRTACHWNTFIQSLFA*SLKNIS Trigger: AGAGATGTTTTTCAGACTTCAAGCAAAGAGGCTTTG...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR TCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCTGTAGGAACGTATCTTaGGAAAAGGTAAACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ADERILTQGSLSGVLEGFCRNVS*EKVNRN Trigger: ATTCCTGTTTACCTTTTCTCAAGATACGTTCCTACA...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR TCA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCCTATCAGCGCGTCAATaGGTTTCTTTAATTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ADERILTQGSLSGVLEGFLSARQ*VSLILL Trigger: AAGAAGAATTAAAGAAACTCATTGACGCGCTGATAG...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTCTTTCTTCAGTGGGCTaGTGTCCACTAAATTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: FCTVCDTGRTACHWNTFILSSVG*CPLNYH Trigger: ATGATAATTTAGTGGACACCAGCCCACTGAAGAAAG...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| 3UTR CAA 72 bp | CATATGGTAACCGTATATTTCATACACTTTTGTCAGTaGCTCCATCAGTGTTACCTTCCTGGTATCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HMVTVYFIHFCQ*LHQCYLPGIQE Trigger: TTCCTGGATACCAGGAAGGTAACACTGATGGAGCAACTGACAAAAGTGTATGAAATATACGGTTACCATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR TCA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTCTATCAGCGCGTCAATaGGTTTCTTTAATTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FCTVCDTGRTACHWNTFILSARQ*VSLILL Trigger: AAGAAGAATTAAAGAAACTCATTGACGCGCTGATAG...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | TATAAGATCATTATGTGTTCTTCCAGGAAAAAGCAGCAATTGCAGGTCGGGGGTACAACAAAGCCTCTTTaGTTGAAGTCTGAAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: YKIIMCSSRKKQQLQVGGTTKPL*LKSEKH Trigger: ATGTTTTTCAGACTTCAAGCAAAGAGGCTTTGTTGT...ACCCCCGACCTGCAATTGCTGCTTTTTCCTGGAAGAACACATAATGATCTTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | ATAGTAATCTATAATATAGTCTCACCATATACAGATGCAGACTCACCCCTCTTTTCTGCTCTTTTGTTTTaGGATTCTTGTCCCAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: IVIYNIVSPYTDADSPLFSALLF*DSCPNA Trigger: TGCGTTGGGACAAGAATCCCAAAACAAAAGAGCAGA...AAAGAGGGGTGAGTCTGCATCTGTATATGGTGAGACTATATTATAGATTACTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTGAACAAATTTCAAGGTaGTCTTTGAATTTAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FCTVCDTGRTACHWNTFIEQISR*SLNLSP Trigger: GGGACTTAAATTCAAAGACCACCTTGAAATTTGTTC...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | ATAGTAATCTATAATATAGTCTCACCATATACAGATGCAGACTCACCCCTCTTTAGAAAAGTCTGGATCTaGATCTTTCTGTTCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IVIYNIVSPYTDADSPLFRKVWI*IFLFWD Trigger: GTCCCAGAACAGAAAGATCCAGATCCAGACTTTTCT...AAAGAGGGGTGAGTCTGCATCTGTATATGGTGAGACTATATTATAGATTACTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTTCCTTCTTCAGGGTTTaGACATTTAACAGTAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FCTVCDTGRTACHWNTFISFFRV*TFNSRK Trigger: TTTTCTACTGTTAAATGTCCAAACCCTGAAGAAGGA...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | ATAGTAATCTATAATATAGTCTCACCATATACAGATGCAGACTCACCCCTCTTTTGCTATCATATCCAGTaGTTATGTCCCGTACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: IVIYNIVSPYTDADSPLFCYHIQ*LCPVHA Trigger: TGCATGTACGGGACATAACCACTGGATATGATAGCA...AAAGAGGGGTGAGTCTGCATCTGTATATGGTGAGACTATATTATAGATTACTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CCA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTGTAAATGTAATCATTTaGCTGTTTTTACTCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FCTVCDTGRTACHWNTFIVNVII*LFLLTG Trigger: GCCTGTGAGTAAAAACAGCCAAATGATTACATTTAC...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | ATAGTAATCTATAATATAGTCTCACCATATACAGATGCAGACTCACCCCTCTTTTCTTATTTGGCTGGCTaGTATCATATCCAGTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: IVIYNIVSPYTDADSPLFSYLAG*YHIQWL Trigger: TAACCACTGGATATGATAGCAGCCAGCCAAATAAGA...AAAGAGGGGTGAGTCTGCATCTGTATATGGTGAGACTATATTATAGATTACTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| 3UTR CAA 72 bp | GAGGCAGACAATGTGCCATTCTCTTCTATTTTAAGCTaGCTTGCTCTATCTATCTATCTATCTATCTATCTA | + |
|
Preference number: 4 (lower is better) Translates to: EADNVPFSSILS*LALSIYLSIYL Trigger: TAGATAGATAGATAGATAGATAGATAGAGCAAGCAAGCTTAAAATAGAAGAGAATGGCACATTGTCTGCCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| 3UTR CAA 72 bp | TTTACTACATGCAGACATCACAAAGTATCCAATCTCTaGGACTCTCTTAAGTTACTATATCCAAATGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FTTCRHHKVSNL*DSLKLLYPNAD Trigger: ATCAGCATTTGGATATAGTAACTTAAGAGAGTCCAAGAGATTGGATACTTTGTGATGTCTGCATGTAGTAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| CDS-3UTR GCA 90 bp | ATAGTAATCTATAATATAGTCTCACCATATACAGATGCAGACTCACCCCTCTTTACAACAAAGCCTCTTTaGTTGAAGTCTGAAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: IVIYNIVSPYTDADSPLFTTKPL*LKSEKH Trigger: ATGTTTTTCAGACTTCAAGCAAAGAGGCTTTGTTGT...AAAGAGGGGTGAGTCTGCATCTGTATATGGTGAGACTATATTATAGATTACTAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CAA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGCAGCTGCTAGTCACTaGACCCCGAGTGTCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SASPGRVVLGVIRKQTSHAAASH*TPSVIA Trigger: GGCTATGACACTCGGGGTCAAGTGACTAGCAGCTGC...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CAA 90 bp | GTTCTGCCACAGCCAGCCGGTCGGCATCAGGATCTGTGGCTAGCACTATCCGGGTTTGTTTTGGGATTCTaGTCCCAACGCAGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VLPQPAGRHQDLWLALSGFVLGF*SQRSHC Trigger: GCAGTGGCTGCGTTGGGACAAGAATCCCAAAACAAA...CCCGGATAGTGCTAGCCACAGATCCTGATGCCGACCGGCTGGCTGTGGCAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATTTTGTTTTGGGATTCTaGTCCCAACGCAGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SASPGRVVLGVIRKQTSHFVLGF*SQRSHC Trigger: GCAGTGGCTGCGTTGGGACAAGAATCCCAAAACAAA...ATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CAA 90 bp | AGAGGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTGGGTTTTGCTCCGATCACGCAATTCCTaGTTCATCCCATTCCGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RGSPMGSHVPVRLLWVLLRSRNS*FIPFRK Trigger: CTTGCGGAATGGGATGAACAAGGAATTGCGTGATCG...GAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGCGCCAGACCAGTGCGTTCTTACTGGGCTCAAGAAAATTCTCTATCAGCGCAGCTGCTAGTCACTaGACCCCGAGTGTCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TERQTSAFLLGSRKFSISAAASH*TPSVIA Trigger: GGCTATGACACTCGGGGTCAAGTGACTAGCAGCTGC...GCTGATAGAGAATTTTCTTGAGCCCAGTAAGAACGCACTGGTCTGGCGCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTGGGTTTTGCTCTCTTCACATCGGCGTTaGGTTTGTTTTTCTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RGSPMGSHVPVRLLWVLLSSHRR*VCFSSS Trigger: GCTGGAAGAAAAACAAACCAAACGCCGATGTGAAGA...GAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CAA 90 bp | GTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGACAAAGCCTCTTTGCTaGAAGTCTGAAAAACATCTC | + |
|
Preference number: 5 (lower is better) Translates to: VPALGGWSWVLSESRQAMTKPLC*KSEKHL Trigger: GAGATGTTTTTCAGACTTCAAGCAAAGAGGCTTTGT...CATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CAA 90 bp | AGAGGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTGGGTTTTGCTCATGTGGAGATGTGATTaGAGCACCAGTTTCCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: RGSPMGSHVPVRLLWVLLMWRCD*STSFPI Trigger: TATTGGGAAACTGGTGCTCAAATCACATCTCCACAT...GAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTGGGTTTTGCTCTCTTCCATGTATTTCTaGCAAATGTCCTGCAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RGSPMGSHVPVRLLWVLLSSMYF*QMSCRG Trigger: TCCTCTGCAGGACATTTGCAAGAAATACATGGAAGA...GAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTGGGTTTTGCTCACATCGGCGTTTGGTTaGTTTTTCTTCCAGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: RGSPMGSHVPVRLLWVLLTSAFG*FFFQQS Trigger: TGATTGCTGGAAGAAAAACAAACCAAACGCCGATGT...GAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CAA 90 bp | AGAGGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTGGGTTTTGCTCAGCGACACAGCCGTTTaGGAAGGTAAATGTAATCAT | + |
|
Preference number: 5 (lower is better) Translates to: RGSPMGSHVPVRLLWVLLSDTAV*EGKCNH Trigger: ATGATTACATTTACCTTCCAAAACGGCTGTGTCGCT...GAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CAA 90 bp | AGAGGCTCCCCCATGGGCTCTCATGTCCCTGTGCGGCTTCTTTGGGTTTTGCTCTTTCAATCTGCTCTTTaGTTTTGGGATTCTTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RGSPMGSHVPVRLLWVLLFQSAL*FWDSCP Trigger: GGGACAAGAATCCCAAAACAAAAGAGCAGATTGAAA...GAGCAAAACCCAAAGAAGCCGCACAGGGACATGAGAGCCCATGGGGGAGCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTTACAAATATCAGTGGGAAGTCTGAGAACAGCAGCAGAAGCCGCAGGAGAGCAGCTGCTAGTCACTaGACCCCGAGTGTCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KFTNISGKSENSSRSRRRAAASH*TPSVIA Trigger: GGCTATGACACTCGGGGTCAAGTGACTAGCAGCTGC...TCTCCTGCGGCTTCTGCTGCTGTTCTCAGACTTCCCACTGATATTTGTAAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| CDS-3UTR CAA 90 bp | GTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGCTTAAAACCAAATACTaGAAAAGCCAACTGCACGTA | + |
|
Preference number: 5 (lower is better) Translates to: VPALGGWSWVLSESRQAMLKTKY*KSQLHV Trigger: TACGTGCAGTTGGCTTTTCAAGTATTTGGTTTTAAG...CATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CAA 90 bp | GTGCCAGCCCTGGGCGGGTGGTCCTGGGTGTTATCAGAAAGCAGACAAGCCATGGGTAAATGTAATCATTaGGCTGTTTTTACTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPALGGWSWVLSESRQAMGKCNH*AVFTHR Trigger: CCTGTGAGTAAAAACAGCCAAATGATTACATTTACC...CATGGCTTGTCTGCTTTCTGATAACACCCAGGACCACCCGCCCAGGGCTGGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS GCA 90 bp | GTCATTGATGTAGCAAAACCCTGCTCCCATGGCAGATCGAAGTCCTaGAGTCCCAAAAGTCATCCGGCAACAAAGACGATCACGCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: VIDVAKPCSHGRSKS*SPKSHPATKTITQF Trigger: GAATTGCGTGATCGTCTTTGTTGCCGGATGACTTTTGGGACTGCAGGACTTCGATCTGCCATGGGAGCAGGGTTTTGCTACATCAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS GCA 90 bp | GTCCTCTTTGCGGTTATGAGATGCAGTAATCATCACACCTGCAACTaGTTTGAGCTCCTGAACGGCATATGGTACGAAAGGTGTAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VLFAVMRCSNHHTCN*FELLNGIWYERCRN Trigger: GTTCCTACACCTTTCGTACCATATGCCGTTCAGGAGCTCAAAGCAGTTGCAGGTGTGATGATTACTGCATCTCATAACCGCAAAGAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS GCA 90 bp | TTCCCAATAAACCTTGTACCCGTTGTCCTCTTTGCGGTTATGAGATaGAGTAATCATCACACCTGCAACTGCTTTGAGCTCCTGAACGGC | + |
|
Preference number: 5 (lower is better) Translates to: FPINLVPVVLFAVMR*SNHHTCNCFELLNG Trigger: GCCGTTCAGGAGCTCAAAGCAGTTGCAGGTGTGATGATTACTGCATCTCATAACCGCAAAGAGGACAACGGGTACAAGGTTTATTGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | TTCACATCGGCGTTTGGTTTGTTTTTCTTCCAGCAATCAAACATCCACCACCCACGATCACGCAATTCCTaGTTCATCCCATTCCGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FTSAFGLFFFQQSNIHHPRSRNS*FIPFRK Trigger: CTTGCGGAATGGGATGAACAAGGAATTGCGTGATCG...TGGGTGGTGGATGTTTGATTGCTGGAAGAAAAACAAACCAAACGCCGATGTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCCGATCACGCAATTCCTaGTTCATCCCATTCCGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ADERILTQGSLSGVLEGFRSRNS*FIPFRK Trigger: CTTGCGGAATGGGATGAACAAGGAATTGCGTGATCG...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | AACATCCACCACCCAAACAAAGCTGCCAGCTCATTTCCTGTGAAAACTTTCCAACATCTCTCCAGGTATTaGTACATCCCCTGTGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: NIHHPNKAASSFPVKTFQHLSRY*YIPCVD Trigger: GTCAACACAGGGGATGTACAAATACCTGGAGAGATG...TTGGAAAGTTTTCACAGGAAATGAGCTGGCAGCTTTGTTTGGGTGGTGGATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | TATAAGATCATTATGTGTTCTTCCAGGAAAAAGCAGCAATTGCAGGTCGGGGGTCATCTCTCCAGGTATTaGTACATCCCCTGTGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: YKIIMCSSRKKQQLQVGGHLSRY*YIPCVD Trigger: GTCAACACAGGGGATGTACAAATACCTGGAGAGATG...ACCCCCGACCTGCAATTGCTGCTTTTTCCTGGAAGAACACATAATGATCTTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CAA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCCATCTCTCCAGGTATTaGTACATCCCCTGTGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ADERILTQGSLSGVLEGFHLSRY*YIPCVD Trigger: GTCAACACAGGGGATGTACAAATACCTGGAGAGATG...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTTACAAATATCAGTGGGAAGTCTGAGAACAGCAGCAGAAGCCGCAGGAGAAGCGACACAGCCGTTTaGGAAGGTAAATGTAATCAT | + |
|
Preference number: 5 (lower is better) Translates to: KFTNISGKSENSSRSRRRSDTAV*EGKCNH Trigger: ATGATTACATTTACCTTCCAAAACGGCTGTGTCGCT...TCTCCTGCGGCTTCTGCTGCTGTTCTCAGACTTCCCACTGATATTTGTAAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| CDS-3UTR CAA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCATCTGCTCTTTTGTTTaGGGATTCTTGTCCCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: ADERILTQGSLSGVLEGFICSFV*GFLSQR Trigger: GCGTTGGGACAAGAATCCCAAAACAAAAGAGCAGAT...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | AACATCCACCACCCAAACAAAGCTGCCAGCTCATTTCCTGTGAAAACTTTCCAATCTTCCATGTATTTCTaGCAAATGTCCTGCAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NIHHPNKAASSFPVKTFQSSMYF*QMSCRG Trigger: TCCTCTGCAGGACATTTGCAAGAAATACATGGAAGA...TTGGAAAGTTTTCACAGGAAATGAGCTGGCAGCTTTGTTTGGGTGGTGGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCTCTTCACATCGGCGTTaGGTTTGTTTTTCTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ADERILTQGSLSGVLEGFSSHRR*VCFSSS Trigger: GCTGGAAGAAAAACAAACCAAACGCCGATGTGAAGA...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS CCA 90 bp | TGTATTTCTTGCAAATGTCCTGCAGAGGATCTTTCTTCAGTGGGCTaGTGTCCACTAAATTATCATTCCAAGAATCATTCCAGGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CISCKCPAEDLSSVG*CPLNYHSKNHSRVP Trigger: TGGAACCCTGGAATGATTCTTGGAATGATAATTTAGTGGACACCAGCCCACTGAAGAAAGATCCTCTGCAGGACATTTGCAAGAAATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTATCTGCTCTTTTGTTTaGGGATTCTTGTCCCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: FCTVCDTGRTACHWNTFIICSFV*GFLSQR Trigger: GCGTTGGGACAAGAATCCCAAAACAAAAGAGCAGAT...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCATGTGGAGATGTGATTaGAGCACCAGTTTCCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: ADERILTQGSLSGVLEGFMWRCD*STSFPI Trigger: TATTGGGAAACTGGTGCTCAAATCACATCTCCACAT...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | TATAAGATCATTATGTGTTCTTCCAGGAAAAAGCAGCAATTGCAGGTCGGGGGTACATCGGCGTTTGGTTaGTTTTTCTTCCAGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: YKIIMCSSRKKQQLQVGGTSAFG*FFFQQS Trigger: TGATTGCTGGAAGAAAAACAAACCAAACGCCGATGT...ACCCCCGACCTGCAATTGCTGCTTTTTCCTGGAAGAACACATAATGATCTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CAA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCACAAAGCCTCTTTGCTaGAAGTCTGAAAAACATCTC | + |
|
Preference number: 5 (lower is better) Translates to: ADERILTQGSLSGVLEGFTKPLC*KSEKHL Trigger: GAGATGTTTTTCAGACTTCAAGCAAAGAGGCTTTGT...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTATGTGGAGATGTGATTaGAGCACCAGTTTCCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: FCTVCDTGRTACHWNTFIMWRCD*STSFPI Trigger: TATTGGGAAACTGGTGCTCAAATCACATCTCCACAT...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS CCA 90 bp | GGGTTCCACACACTCTTCTATACATTTCAGAATTTCTTTATCATGTaGAGATGTGATTTGAGCACCAGTTTCCCAATAAACCTTGTACCC | + |
|
Preference number: 5 (lower is better) Translates to: GFHTLFYTFQNFFIM*RCDLSTSFPINLVP Trigger: GGGTACAAGGTTTATTGGGAAACTGGTGCTCAAATCACATCTCCACATGATAAAGAAATTCTGAAATGTATAGAAGAGTGTGTGGAACCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS-3UTR CAA 90 bp | GCAGATGAGAGAATTCTAACACAAGGTTCACTGAGTGGAGTTCTTGAAGGTTTCGGTAAATGTAATCATTaGGCTGTTTTTACTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: ADERILTQGSLSGVLEGFGKCNH*AVFTHR Trigger: CCTGTGAGTAAAAACAGCCAAATGATTACATTTACC...GAAACCTTCAAGAACTCCACTCAGTGAACCTTGTGTTAGAATTCTCTCATCTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CAA 90 bp | TTTTGTACTGTTTGTGATACAGGAAGAACAGCGTGCCACTGGAACACTTTCATTCTTAAAACCAAATACTaGAAAAGCCAACTGCACGTA | + |
|
Preference number: 5 (lower is better) Translates to: FCTVCDTGRTACHWNTFILKTKY*KSQLHV Trigger: TACGTGCAGTTGGCTTTTCAAGTATTTGGTTTTAAG...AATGAAAGTGTTCCAGTGGCACGCTGTTCTTCCTGTATCACAAACAGTACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS-3UTR CAA 90 bp | AGGAGTGCTGCCACTACTGTTTTATGTTCAGTAAACATCCGTCTTAAATACATAGTACTGATTTCTTATTaGGCTGGCTGCTATCATATC | + |
|
Preference number: 5 (lower is better) Translates to: RSAATTVLCSVNIRLKYIVLISY*AGCYHI Trigger: GATATGATAGCAGCCAGCCAAATAAGAAATCAGTAC...TATGTATTTAAGACGGATGTTTACTGAACATAAAACAGTAGTGGCAGCACTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084935.11 |
||
| CDS-3UTR CAA 90 bp | ATAGTAATCTATAATATAGTCTCACCATATACAGATGCAGACTCACCCCTCTTTGTACTGATTTCTTATTaGGCTGGCTGCTATCATATC | + |
|
Preference number: 5 (lower is better) Translates to: IVIYNIVSPYTDADSPLFVLISY*AGCYHI Trigger: GATATGATAGCAGCCAGCCAAATAAGAAATCAGTAC...AAAGAGGGGTGAGTCTGCATCTGTATATGGTGAGACTATATTATAGATTACTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
||
| CDS CAA 90 bp | AGCTGTGAGTTTAGCAAGCCTCTGGCTGCTGCAGCTGCTAGTCACTaGACCCCGAGTGTCATAGCCCACAACAAAGCCTCTTTGCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SCEFSKPLAAAAASH*TPSVIAHNKASLLE Trigger: TTCAAGCAAAGAGGCTTTGTTGTGGGCTATGACACTCGGGGTCAAGTGACTAGCAGCTGCAGCAGCCAGAGGCTTGCTAAACTCACAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS TCA 72 bp | GCAGTAATCATCACACCTGCAACTGCTTTGAGCTCCTaGACGGCATATGGTACGAAAGGTGTAGGAACGTAT | + |
|
Preference number: 6 (lower is better) Translates to: AVIITPATALSS*TAYGTKGVGTY Trigger: ATACGTTCCTACACCTTTCGTACCATATGCCGTTCAGGAGCTCAAAGCAGTTGCAGGTGTGATGATTACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS GCA 72 bp | CTGTATTACTGTAAGGTCATTGATGTAGCAAAACCCTaGTCCCATGGCAGATCGAAGTCCTGCAGTCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LYYCKVIDVAKP*SHGRSKSCSPK Trigger: TTTGGGACTGCAGGACTTCGATCTGCCATGGGAGCAGGGTTTTGCTACATCAATGACCTTACAGTAATACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS GCA 72 bp | AACCTTGTACCCGTTGTCCTCTTTGCGGTTATGAGATaGAGTAATCATCACACCTGCAACTGCTTTGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: NLVPVVLFAVMR*SNHHTCNCFEL Trigger: GAGCTCAAAGCAGTTGCAGGTGTGATGATTACTGCATCTCATAACCGCAAAGAGGACAACGGGTACAAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS CAA 72 bp | TCATCCCATTCCGCAAGAGATTTTCAATCTGCTCTTTaGTTTTGGGATTCTTGTCCCAACGCAGCCACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSHSARDFQSAL*FWDSCPNAATA Trigger: GGCAGTGGCTGCGTTGGGACAAGAATCCCAAAACAAAAGAGCAGATTGAAAATCTCTTGCGGAATGGGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS TCA 72 bp | GTCATAGCCCACAACAAAGCCTCTTTGCTTGAAGTCTaGAAAACATCTCTCCAGGTATTTGTACATCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VIAHNKASLLEV*KTSLQVFVHPL Trigger: CAGGGGATGTACAAATACCTGGAGAGATGTTTTTCAGACTTCAAGCAAAGAGGCTTTGTTGTGGGCTATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
||
| CDS GCA 72 bp | TTCTTCAGATCTTCCATGTATTTCTTGCAAATGTCCTaGAGAGGATCTTTCTTCAGTGGGCTGGTGTCCACT | + |
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Preference number: 6 (lower is better) Translates to: FFRSSMYFLQMS*RGSFFSGLVST Trigger: AGTGGACACCAGCCCACTGAAGAAAGATCCTCTGCAGGACATTTGCAAGAAATACATGGAAGATCTGAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
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| CDS CAA 72 bp | AAAGTCATCCGGCAACAAAGACGATCACGCAATTCCTaGTTCATCCCATTCCGCAAGAGATTTTCAATCTGC | + |
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Preference number: 6 (lower is better) Translates to: KVIRQQRRSRNS*FIPFRKRFSIC Trigger: GCAGATTGAAAATCTCTTGCGGAATGGGATGAACAAGGAATTGCGTGATCGTCTTTGTTGCCGGATGACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
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| CDS CAA 72 bp | TTCTGGGACTGGAATTGGAGGCTTAAAACCAAATACTaGAAAAGCCAACTGCACGTAGTCATGTCCAACTCC | + |
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Preference number: 6 (lower is better) Translates to: FWDWNWRLKTKY*KSQLHVVMSNS Trigger: GGAGTTGGACATGACTACGTGCAGTTGGCTTTTCAAGTATTTGGTTTTAAGCCTCCAATTCCAGTCCCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
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| CDS CAA 90 bp | ATCTTTCTGTTCTGGGACTGGAATTGGAGGCTTAAAACCAAATACTaGAAAAGCCAACTGCACGTAGTCATGTCCAACTCCATGGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: IFLFWDWNWRLKTKY*KSQLHVVMSNSMEG Trigger: TCCTTCCATGGAGTTGGACATGACTACGTGCAGTTGGCTTTTCAAGTATTTGGTTTTAAGCCTCCAATTCCAGTCCCAGAACAGAAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
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| CDS CCA 72 bp | GTCTGGATCTGGATCTTTCTGTTCTGGGACTGGAATTaGAGGCTTAAAACCAAATACTTGAAAAGCCAACTG | + |
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Preference number: 6 (lower is better) Translates to: VWIWIFLFWDWN*RLKTKYLKSQL Trigger: CAGTTGGCTTTTCAAGTATTTGGTTTTAAGCCTCCAATTCCAGTCCCAGAACAGAAAGATCCAGATCCAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 |
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| CDS CAA 90 bp | CTCTTCTATACATTTCAGAATTTCTTTATCATGTGGAGATGTGATTaGAGCACCAGTTTCCCAATAAACCTTGTACCCGTTGTCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LFYTFQNFFIMWRCD*STSFPINLVPVVLF Trigger: AAAGAGGACAACGGGTACAAGGTTTATTGGGAAACTGGTGCTCAAATCACATCTCCACATGATAAAGAAATTCTGAAATGTATAGAAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
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| CDS CAA 72 bp | ACATTTCAGAATTTCTTTATCATGTGGAGATGTGATTaGAGCACCAGTTTCCCAATAAACCTTGTACCCGTT | + |
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Preference number: 6 (lower is better) Translates to: TFQNFFIMWRCD*STSFPINLVPV Trigger: AACGGGTACAAGGTTTATTGGGAAACTGGTGCTCAAATCACATCTCCACATGATAAAGAAATTCTGAAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
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| CDS CCA 72 bp | ACACTCTTCTATACATTTCAGAATTTCTTTATCATGTaGAGATGTGATTTGAGCACCAGTTTCCCAATAAAC | + |
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Preference number: 6 (lower is better) Translates to: TLFYTFQNFFIM*RCDLSTSFPIN Trigger: GTTTATTGGGAAACTGGTGCTCAAATCACATCTCCACATGATAAAGAAATTCTGAAATGTATAGAAGAGTGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054436.9 ENSMUST00000084935.11 ENSMUST00000162108.8 |
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