Pregenerated sensors for PGM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029171Ensembl transcript IDs: ENSMUST00000087324.7, ENSMUST00000199093.5
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAAGTGAAGAGCCACCATCCCAGCAGGGCCCCCAGCTCATTGCCTaGGAACACTCTCCACTCACCACTGTCTTGCTTCTCAGCCACAGC | + |
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Preference number: 1 (lower is better) Translates to: GSEEPPSQQGPQLIA*EHSPLTTVLLLSHS Trigger: GCTGTGGCTGAGAAGCAAGACAGTGGTGAGTGGAGAGTGTTCTCAGGCAATGAGCTGGGGGCCCTGCTGGGATGGTGGCTCTTCACTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR GCA 90 bp | GCCCCCAGCTCATTGCCTGAGAACACTCTCCACTCACCACTGTCTTaGTTCTCAGCCACAGCGAGCCTGTCAGCATCTGGGTCATTGGCT | + |
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Preference number: 1 (lower is better) Translates to: APSSLPENTLHSPLS*FSATASLSASGSLA Trigger: AGCCAATGACCCAGATGCTGACAGGCTCGCTGTGGCTGAGAAGCAAGACAGTGGTGAGTGGAGAGTGTTCTCAGGCAATGAGCTGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR TCA 90 bp | CTTTCTGTTGGGGAACAGCTTCGGGAGGAGCAAGGTCAAAAGCCTTaGAGGCCAACTGCACAAACTCGTGGCCCACACCATGGACAGAGG | + |
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Preference number: 1 (lower is better) Translates to: LSVGEQLREEQGQKP*RPTAQTRGPHHGQR Trigger: CCTCTGTCCATGGTGTGGGCCACGAGTTTGTGCAGTTGGCCTTCAAGGCTTTTGACCTTGCTCCTCCCGAAGCTGTTCCCCAACAGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR CCA 90 bp | AGTCAAGACACCTTTGCCCTCCTCAGGATTCGGGTATTTGACAGTTaGAAACTCGGGATCCGGATCTTTCTGTTGGGGAACAGCTTCGGG | + |
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Preference number: 1 (lower is better) Translates to: SQDTFALLRIRVFDS*KLGIRIFLLGNSFG Trigger: CCCGAAGCTGTTCCCCAACAGAAAGATCCGGATCCCGAGTTTCCAACTGTCAAATACCCGAATCCTGAGGAGGGCAAAGGTGTCTTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR TCA 90 bp | TTTTCCCCTGGTCTCCGAGCTGTTGGGCTCTGTTTCCCATCCACTTaGAGCCGGTTAATGTTTCCTCGAAATGAAAGCCTTCCTTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: FSPGLRAVGLCFPST*SRLMFPRNESLPSG Trigger: CCCTGAAGGAAGGCTTTCATTTCGAGGAAACATTAACCGGCTTCAAGTGGATGGGAAACAGAGCCCAACAGCTCGGAGACCAGGGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR CCA 90 bp | AGCCGGTTAATGTTTCCTCGAAATGAAAGCCTTCCTTCAGGGCTATaGCCCGCAAGATTTTGGAGGAAACAGTGCTGGACAGCATGTATG | + |
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Preference number: 1 (lower is better) Translates to: SRLMFPRNESLPSGL*PARFWRKQCWTACM Trigger: CATACATGCTGTCCAGCACTGTTTCCTCCAAAATCTTGCGGGCCATAGCCCTGAAGGAAGGCTTTCATTTCGAGGAAACATTAACCGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR TCA 90 bp | AAGATAAAGTCAAGACACCTTTGCCCTCCTCAGGATTCGGGTATTTaGCAGTTGGAAACTCGGGATCCGGATCTTTCTGTTGGGGAACAG | + |
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Preference number: 1 (lower is better) Translates to: KIKSRHLCPPQDSGI*QLETRDPDLSVGEQ Trigger: CTGTTCCCCAACAGAAAGATCCGGATCCCGAGTTTCCAACTGTCAAATACCCGAATCCTGAGGAGGGCAAAGGTGTCTTGACTTTATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGTGAAGAGCCACCATCCCAGCAGGGCCCCCAGCTCATTGCCTGAGAACTCGTGGCCCACACCATaGACAGAGGTGTGCACGAAC | + |
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Preference number: 2 (lower is better) Translates to: QEVKSHHPSRAPSSLPENSWPTP*TEVCTN Trigger: GTTCGTGCACACCTCTGTCCATGGTGTGGGCCACGA...GTTCTCAGGCAATGAGCTGGGGGCCCTGCTGGGATGGTGGCTCTTCACTTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR CAA 90 bp | TTCCAGGAAGTGAAGAGCCACCATCCCAGCAGGGCCCCCAGCTCATaGCCTGAGAACACTCTCCACTCACCACTGTCTTGCTTCTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: FQEVKSHHPSRAPSS*PENTLHSPLSCFSA Trigger: GGCTGAGAAGCAAGACAGTGGTGAGTGGAGAGTGTTCTCAGGCAATGAGCTGGGGGCCCTGCTGGGATGGTGGCTCTTCACTTCCTGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR-3UTR GCA 90 bp | GACTGTTTTCCCCTGGTCTCCGAGCTGTTGGGCTCTGTTTCCCATCCACTTGAAGGGCCCCCAGCTCATTaGCTGAGAACACTCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: DCFPLVSELLGSVSHPLEGPPAH*LRTLST Trigger: AGTGGAGAGTGTTCTCAGGCAATGAGCTGGGGGCCC...TTCAAGTGGATGGGAAACAGAGCCCAACAGCTCGGAGACCAGGGGAAAACAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR-3UTR GCA 90 bp | TCAGGGCTATGGCCCGCAAGATTTTGGAGGAAACAGTGCTGGACAGCATGTATGCACTCACCACTGTCTTaGTTCTCAGCCACAGCGAGC | + |
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Preference number: 2 (lower is better) Translates to: SGLWPARFWRKQCWTACMHSPLS*FSATAS Trigger: GCTCGCTGTGGCTGAGAAGCAAGACAGTGGTGAGTG...CATACATGCTGTCCAGCACTGTTTCCTCCAAAATCTTGCGGGCCATAGCCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR-3UTR TCA 90 bp | ACTCTCCACTCACCACTGTCTTGCTTCTCAGCCACAGCGAGCCTGTCAGCATCTCAAGGTCAAAAGCCTTaGAGGCCAACTGCACAAACT | + |
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Preference number: 2 (lower is better) Translates to: TLHSPLSCFSATASLSASQGQKP*RPTAQT Trigger: AGTTTGTGCAGTTGGCCTTCAAGGCTTTTGACCTTG...AGATGCTGACAGGCTCGCTGTGGCTGAGAAGCAAGACAGTGGTGAGTGGAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR-3UTR TCA 90 bp | ACACTCTCCACTCACCACTGTCTTGCTTCTCAGCCACAGCGAGCCTGTCAGCATCAGGATTCGGGTATTTaGCAGTTGGAAACTCGGGAT | + |
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Preference number: 2 (lower is better) Translates to: TLSTHHCLASQPQRACQHQDSGI*QLETRD Trigger: ATCCCGAGTTTCCAACTGTCAAATACCCGAATCCTG...ATGCTGACAGGCTCGCTGTGGCTGAGAAGCAAGACAGTGGTGAGTGGAGAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR-3UTR CCA 90 bp | CGGATCTTTCTGTTGGGGAACAGCTTCGGGAGGAGCAAGGTCAAAAGCCTTGAAAACTGCACAAACTCGTaGCCCACACCATGGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: RIFLLGNSFGRSKVKSLENCTNS*PTPWTE Trigger: CTCTGTCCATGGTGTGGGCCACGAGTTTGTGCAGTT...TTCAAGGCTTTTGACCTTGCTCCTCCCGAAGCTGTTCCCCAACAGAAAGATCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR CAA 90 bp | CTGTCTTGCTTCTCAGCCACAGCGAGCCTGTCAGCATCTGGGTCATaGGCTAGGACGATTTTGGCCTTGATTTTGTCAGCCAAGGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: LSCFSATASLSASGS*ARTILALILSAKAK Trigger: TTTTGCCTTGGCTGACAAAATCAAGGCCAAAATCGTCCTAGCCAATGACCCAGATGCTGACAGGCTCGCTGTGGCTGAGAAGCAAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR-3UTR CCA 90 bp | CTTCAGGGCTATGGCCCGCAAGATTTTGGAGGAAACAGTGCTGGACAGCATGTACGGGTATTTGACAGTTaGAAACTCGGGATCCGGATC | + |
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Preference number: 2 (lower is better) Translates to: LQGYGPQDFGGNSAGQHVRVFDS*KLGIRI Trigger: GATCCGGATCCCGAGTTTCCAACTGTCAAATACCCG...TACATGCTGTCCAGCACTGTTTCCTCCAAAATCTTGCGGGCCATAGCCCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR-3UTR GCA 90 bp | ATGGCCCGCAAGATTTTGGAGGAAACAGTGCTGGACAGCATGTATGTGTCTTTGCCATGGACAGAGGTGTaGACGAACTTCACCTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: MARKILEETVLDSMYVSLPWTEV*TNFTLL Trigger: GAGCAAGGTGAAGTTCGTGCACACCTCTGTCCATGG...CAAAGACACATACATGCTGTCCAGCACTGTTTCCTCCAAAATCTTGCGGGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR-3UTR CCA 90 bp | ATGGCCCGCAAGATTTTGGAGGAAACAGTGCTGGACAGCATGTATGTGTCTTTGTCCGGATCTTTCTGTTaGGGAACAGCTTCGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: MARKILEETVLDSMYVSLSGSFC*GTASGG Trigger: TCCTCCCGAAGCTGTTCCCCAACAGAAAGATCCGGA...CAAAGACACATACATGCTGTCCAGCACTGTTTCCTCCAAAATCTTGCGGGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR CAA 90 bp | GCCACAGCGAGCCTGTCAGCATCTGGGTCATTGGCTAGGACGATTTaGGCCTTGATTTTGTCAGCCAAGGCAAAAGATAAAGTCAAGACA | + |
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Preference number: 2 (lower is better) Translates to: ATASLSASGSLARTI*ALILSAKAKDKVKT Trigger: TGTCTTGACTTTATCTTTTGCCTTGGCTGACAAAATCAAGGCCAAAATCGTCCTAGCCAATGACCCAGATGCTGACAGGCTCGCTGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR CAA 90 bp | AAGCTCGCCAGCTCTGCACAAATAACAGCAGCACTGACGCCATCTTaGTCCAGAACAAAGGGACAGCACATGTATCCGATAGCTTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: KLASSAQITAALTPS*SRTKGQHMYPIASS Trigger: TGAAGAAGCTATCGGATACATGTGCTGTCCCTTTGTTCTGGACAAAGATGGCGTCAGTGCTGCTGTTATTTGTGCAGAGCTGGCGAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR-3UTR TCA 90 bp | ATGGCCCGCAAGATTTTGGAGGAAACAGTGCTGGACAGCATGTATGTGTCTTTGTTTCTTTCCAGGAAGTaGAGAGCCACCATCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: MARKILEETVLDSMYVSLFLSRK*RATIPA Trigger: TGCTGGGATGGTGGCTCTTCACTTCCTGGAAAGAAA...CAAAGACACATACATGCTGTCCAGCACTGTTTCCTCCAAAATCTTGCGGGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR-3UTR TCA 90 bp | AGCTGTTGGGCTCTGTTTCCCATCCACTTGAAGCCGGTTAATGTTTCCTCGAAAGGACGATTTTGGCCTTaGTTTTGTCAGCCAAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: SCWALFPIHLKPVNVSSKGRFWP*FCQPRQ Trigger: TTGCCTTGGCTGACAAAATCAAGGCCAAAATCGTCC...TTTCGAGGAAACATTAACCGGCTTCAAGTGGATGGGAAACAGAGCCCAACAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR CAA 90 bp | AAAGATAAAGTCAAGACACCTTTGCCCTCCTCAGGATTCGGGTATTaGACAGTTGGAAACTCGGGATCCGGATCTTTCTGTTGGGGAACA | + |
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Preference number: 2 (lower is better) Translates to: KDKVKTPLPSSGFGY*TVGNSGSGSFCWGT Trigger: TGTTCCCCAACAGAAAGATCCGGATCCCGAGTTTCCAACTGTCAAATACCCGAATCCTGAGGAGGGCAAAGGTGTCTTGACTTTATCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR CAA 90 bp | AACAGTGCTGGACAGCATGTATGTGTCTTTGAGGTTACTTTGATCTaGGTTCTTTTCTTTCCAGGAAGTGAAGAGCCACCATCCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: NSAGQHVCVFEVTLI*VLFFPGSEEPPSQQ Trigger: CTGCTGGGATGGTGGCTCTTCACTTCCTGGAAAGAAAAGAACCAAGATCAAAGTAACCTCAAAGACACATACATGCTGTCCAGCACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR CAA 90 bp | GGAGGAAACAGTGCTGGACAGCATGTATGTGTCTTTGAGGTTACTTaGATCTTGGTTCTTTTCTTTCCAGGAAGTGAAGAGCCACCATCC | + |
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Preference number: 2 (lower is better) Translates to: GGNSAGQHVCVFEVT*ILVLFFPGSEEPPS Trigger: GGATGGTGGCTCTTCACTTCCTGGAAAGAAAAGAACCAAGATCAAAGTAACCTCAAAGACACATACATGCTGTCCAGCACTGTTTCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR-3UTR TCA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACATGTAAATACTTGTGGTaGTTATCTGAATCACTTGGC | + |
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Preference number: 2 (lower is better) Translates to: YPRHNLGTILVSLSFNYTCKYLW*LSESLG Trigger: GCCAAGTGATTCAGATAATCACCACAAGTATTTACA...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| 3UTR TCA 72 bp | GAGCCACCATCCCAGCAGGGCCCCCAGCTCATTGCCTaGGAACACTCTCCACTCACCACTGTCTTGCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: EPPSQQGPQLIA*EHSPLTTVLLL Trigger: GAGAAGCAAGACAGTGGTGAGTGGAGAGTGTTCTCAGGCAATGAGCTGGGGGCCCTGCTGGGATGGTGGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR TCA 72 bp | GGGGAACAGCTTCGGGAGGAGCAAGGTCAAAAGCCTTaGAGGCCAACTGCACAAACTCGTGGCCCACACCAT | + |
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Preference number: 3 (lower is better) Translates to: GEQLREEQGQKP*RPTAQTRGPHH Trigger: ATGGTGTGGGCCACGAGTTTGTGCAGTTGGCCTTCAAGGCTTTTGACCTTGCTCCTCCCGAAGCTGTTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAGTGAAGAGCCACCATCCCAGCAGGGCCCCCAGCTCATTGCCTGAGAACTCAGGATTCGGGTATTaGACAGTTGGAAACTCGGGA | + |
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Preference number: 3 (lower is better) Translates to: QEVKSHHPSRAPSSLPENSGFGY*TVGNSG Trigger: TCCCGAGTTTCCAACTGTCAAATACCCGAATCCTGA...GTTCTCAGGCAATGAGCTGGGGGCCCTGCTGGGATGGTGGCTCTTCACTTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR-3UTR CAA 90 bp | ACTCTCCACTCACCACTGTCTTGCTTCTCAGCCACAGCGAGCCTGTCAGCATCTAAAGTCAAGACACCTTaGCCCTCCTCAGGATTCGGG | + |
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Preference number: 3 (lower is better) Translates to: TLHSPLSCFSATASLSASKVKTP*PSSGFG Trigger: CCCGAATCCTGAGGAGGGCAAAGGTGTCTTGACTTT...AGATGCTGACAGGCTCGCTGTGGCTGAGAAGCAAGACAGTGGTGAGTGGAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR CCA 72 bp | TTGACAGTTGGAAACTCGGGATCCGGATCTTTCTGTTaGGGAACAGCTTCGGGAGGAGCAAGGTCAAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: LTVGNSGSGSFC*GTASGGARSKA Trigger: GGCTTTTGACCTTGCTCCTCCCGAAGCTGTTCCCCAACAGAAAGATCCGGATCCCGAGTTTCCAACTGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR TCA 72 bp | GGTTACTTTGATCTTGGTTCTTTTCTTTCCAGGAAGTaGAGAGCCACCATCCCAGCAGGGCCCCCAGCTCAT | + |
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Preference number: 3 (lower is better) Translates to: GYFDLGSFLSRK*RATIPAGPPAH Trigger: ATGAGCTGGGGGCCCTGCTGGGATGGTGGCTCTTCACTTCCTGGAAAGAAAAGAACCAAGATCAAAGTAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR CCA 72 bp | ACCTTTGCCCTCCTCAGGATTCGGGTATTTGACAGTTaGAAACTCGGGATCCGGATCTTTCTGTTGGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: TFALLRIRVFDS*KLGIRIFLLGN Trigger: GTTCCCCAACAGAAAGATCCGGATCCCGAGTTTCCAACTGTCAAATACCCGAATCCTGAGGAGGGCAAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR-3UTR CAA 90 bp | AGGGCTATGGCCCGCAAGATTTTGGAGGAAACAGTGCTGGACAGCATGTATGTGAGGACGATTTTGGCCTaGATTTTGTCAGCCAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: RAMARKILEETVLDSMYVRTILA*ILSAKA Trigger: TGCCTTGGCTGACAAAATCAAGGCCAAAATCGTCCT...CACATACATGCTGTCCAGCACTGTTTCCTCCAAAATCTTGCGGGCCATAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR CCA 72 bp | GAAAGCCTTCCTTCAGGGCTATGGCCCGCAAGATTTTaGAGGAAACAGTGCTGGACAGCATGTATGTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: ESLPSGLWPARF*RKQCWTACMCL Trigger: AAGACACATACATGCTGTCCAGCACTGTTTCCTCCAAAATCTTGCGGGCCATAGCCCTGAAGGAAGGCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR-3UTR CAA 90 bp | TTGGCCTTGATTTTGTCAGCCAAGGCAAAAGATAAAGTCAAGACACCTTTGCCCATCCGGATCTTTCTGTaGGGGAACAGCTTCGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LALILSAKAKDKVKTPLPIRIFL*GNSFGR Trigger: CCTCCCGAAGCTGTTCCCCAACAGAAAGATCCGGAT...GGGCAAAGGTGTCTTGACTTTATCTTTTGCCTTGGCTGACAAAATCAAGGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR TCA 72 bp | TCAAGACACCTTTGCCCTCCTCAGGATTCGGGTATTTaGCAGTTGGAAACTCGGGATCCGGATCTTTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: SRHLCPPQDSGI*QLETRDPDLSV Trigger: AACAGAAAGATCCGGATCCCGAGTTTCCAACTGTCAAATACCCGAATCCTGAGGAGGGCAAAGGTGTCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR TCA 72 bp | TGGAGGAAACAGTGCTGGACAGCATGTATGTGTCTTTaGGGTTACTTTGATCTTGGTTCTTTTCTTTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: WRKQCWTACMCL*GYFDLGSFLSR Trigger: CCTGGAAAGAAAAGAACCAAGATCAAAGTAACCTCAAAGACACATACATGCTGTCCAGCACTGTTTCCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR-3UTR CAA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACACATAGAGATGTTAGTTaGTTGGGTTTGGCCAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: YPRHNLGTILVSLSFNYTHRDVS*LGLAKL Trigger: AAGCTTGGCCAAACCCAACAAACTAACATCTCTATG...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| 3UTR-3UTR CAA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACAAGAGATGTTAGTTTGTaGGGTTTGGCCAAGCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: YPRHNLGTILVSLSFNYTRDVSL*GLAKLF Trigger: AAAAAGCTTGGCCAAACCCAACAAACTAACATCTCT...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| 3UTR CAA 72 bp | GTGAAGAGCCACCATCCCAGCAGGGCCCCCAGCTCATaGCCTGAGAACACTCTCCACTCACCACTGTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: VKSHHPSRAPSS*PENTLHSPLSC Trigger: GCAAGACAGTGGTGAGTGGAGAGTGTTCTCAGGCAATGAGCTGGGGGCCCTGCTGGGATGGTGGCTCTTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| CDS-3UTR TCA 90 bp | ACACTCTCCACTCACCACTGTCTTGCTTCTCAGCCACAGCGAGCCTGTCAGCATGACTCCTCCCAAGCCTaGGGCCAGGGCTCTAGATTT | + |
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Preference number: 4 (lower is better) Translates to: TLSTHHCLASQPQRACQHDSSQA*GQGSRF Trigger: AAATCTAGAGCCCTGGCCTCAGGCTTGGGAGGAGTC...ATGCTGACAGGCTCGCTGTGGCTGAGAAGCAAGACAGTGGTGAGTGGAGAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR CAA 72 bp | TTCTCAGCCACAGCGAGCCTGTCAGCATCTGGGTCATaGGCTAGGACGATTTTGGCCTTGATTTTGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: FSATASLSASGS*ARTILALILSA Trigger: GGCTGACAAAATCAAGGCCAAAATCGTCCTAGCCAATGACCCAGATGCTGACAGGCTCGCTGTGGCTGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| CDS-3UTR GCA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACACAAACCTCCGGCTGCTaGCCCCGCTGGCGGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: YPRHNLGTILVSLSFNYTQTSGC*PRWRGE Trigger: CTCACCCCGCCAGCGGGGGCAGCAGCCGGAGGTTTG...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CCA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACAGGCTGCTGCCCCCGCTaGCGGGGTGAGCTCTCGCAT | + |
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Preference number: 4 (lower is better) Translates to: YPRHNLGTILVSLSFNYTGCCPR*RGELSH Trigger: ATGCGAGAGCTCACCCCGCCAGCGGGGGCAGCAGCC...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| 3UTR CAA 72 bp | TTTGACAGTTGGAAACTCGGGATCCGGATCTTTCTGTaGGGGAACAGCTTCGGGAGGAGCAAGGTCAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: FDSWKLGIRIFL*GNSFGRSKVKS Trigger: GCTTTTGACCTTGCTCCTCCCGAAGCTGTTCCCCAACAGAAAGATCCGGATCCCGAGTTTCCAACTGTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| 3UTR CAA 72 bp | GTCAAGACACCTTTGCCCTCCTCAGGATTCGGGTATTaGACAGTTGGAAACTCGGGATCCGGATCTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: VKTPLPSSGFGY*TVGNSGSGSFC Trigger: ACAGAAAGATCCGGATCCCGAGTTTCCAACTGTCAAATACCCGAATCCTGAGGAGGGCAAAGGTGTCTTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| CDS-3UTR GCA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTCCCAACGCAGCCACTaGGCGGTCTCCTGGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SDYPRHNLGTILVSLSFNSQRSH*AVSWSS Trigger: ACTGGACCAGGAGACCGCGCAGTGGCTGCGTTGGGA...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CCA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTGGGCTCAGTCCCACTaGTCCGCATGGTGGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SDYPRHNLGTILVSLSFNWAQSH*SAWWPH Trigger: GTGTGGCCACCATGCGGACCAGTGGGACTGAGCCCA...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR GCA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACGGGCCCCCAGCTCATTaGCTGAGAACACTCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SDYPRHNLGTILVSLSFNGPPAH*LRTLST Trigger: AGTGGAGAGTGTTCTCAGGCAATGAGCTGGGGGCCC...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| 3UTR CAA 72 bp | AGCTCTGCACAAATAACAGCAGCACTGACGCCATCTTaGTCCAGAACAAAGGGACAGCACATGTATCCGATA | + |
|
Preference number: 4 (lower is better) Translates to: SSAQITAALTPS*SRTKGQHMYPI Trigger: TATCGGATACATGTGCTGTCCCTTTGTTCTGGACAAAGATGGCGTCAGTGCTGCTGTTATTTGTGCAGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| CDS-3UTR TCA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACAGACTCCTCCCAAGCCTaGGGCCAGGGCTCTAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: YPRHNLGTILVSLSFNYTDSSQA*GQGSRF Trigger: AAATCTAGAGCCCTGGCCTCAGGCTTGGGAGGAGTC...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CCA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACGAGGTTAAAGGGTTCTaGTCCCAACGCAGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SDYPRHNLGTILVSLSFNEVKGF*SQRSHC Trigger: GCAGTGGCTGCGTTGGGACCAGAACCCTTTAACCTC...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CCA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACATCGTGGCCCACACCATaGACAGAGGTGTGCACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YPRHNLGTILVSLSFNYTSWPTP*TEVCTN Trigger: GTTCGTGCACACCTCTGTCCATGGTGTGGGCCACGA...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| 3UTR CAA 72 bp | AGCCTGTCAGCATCTGGGTCATTGGCTAGGACGATTTaGGCCTTGATTTTGTCAGCCAAGGCAAAAGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSASGSLARTI*ALILSAKAKDK Trigger: TTTATCTTTTGCCTTGGCTGACAAAATCAAGGCCAAAATCGTCCTAGCCAATGACCCAGATGCTGACAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| CDS-3UTR GCA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACCCATGGACAGAGGTGTaGACGAACTTCACCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SDYPRHNLGTILVSLSFNPWTEV*TNFTLL Trigger: GAGCAAGGTGAAGTTCGTGCACACCTCTGTCCATGG...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR GCA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACACACTCACCACTGTCTTaGTTCTCAGCCACAGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YPRHNLGTILVSLSFNYTHSPLS*FSATAS Trigger: GCTCGCTGTGGCTGAGAAGCAAGACAGTGGTGAGTG...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CCA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACCTTCCTTCAGGGCTATaGCCCGCAAGATTTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDYPRHNLGTILVSLSFNLPSGL*PARFWR Trigger: CCTCCAAAATCTTGCGGGCCATAGCCCTGAAGGAAG...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CCA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACATGGTCTCCGAGCTGTTaGGCTCTGTTTCCCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YPRHNLGTILVSLSFNYTWSPSC*ALFPIH Trigger: GTGGATGGGAAACAGAGCCCAACAGCTCGGAGACCA...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR TCA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTCTGCTTCAGGTCACTaGACTGCTTTTCCAGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: SDYPRHNLGTILVSLSFNSASGH*TAFPGT Trigger: GGTACCTGGAAAAGCAGTTCAGTGACCTGAAGCAGA...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR TCA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTTTCTTTCCAGGAAGTaGAGAGCCACCATCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SDYPRHNLGTILVSLSFNFLSRK*RATIPA Trigger: TGCTGGGATGGTGGCTCTTCACTTCCTGGAAAGAAA...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR GCA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACAAGTCAAGACACCTTTaGCCTCCTCAGGATTCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDYPRHNLGTILVSLSFNKSRHL*PPQDSG Trigger: ACCCGAATCCTGAGGAGGGCAAAGGTGTCTTGACTT...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CCA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACACGGCACAAAGGGGGTaGGGGTTATATCAGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SDYPRHNLGTILVSLSFNTAQRG*GLYQRR Trigger: TCTTCTCTGATATAACCCCCACCCCCTTTGTGCCGT...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CCA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACAAACTGCACAAACTCGTaGCCCACACCATGGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YPRHNLGTILVSLSFNYTNCTNS*PTPWTE Trigger: CTCTGTCCATGGTGTGGGCCACGAGTTTGTGCAGTT...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CCA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACATCCGGATCTTTCTGTTaGGGAACAGCTTCGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YPRHNLGTILVSLSFNYTSGSFC*GTASGG Trigger: TCCTCCCGAAGCTGTTCCCCAACAGAAAGATCCGGA...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CCA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACCGGGTATTTGACAGTTaGAAACTCGGGATCCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SDYPRHNLGTILVSLSFNRVFDS*KLGIRI Trigger: GATCCGGATCCCGAGTTTCCAACTGTCAAATACCCG...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| 3UTR CAA 72 bp | GGACAGCATGTATGTGTCTTTGAGGTTACTTTGATCTaGGTTCTTTTCTTTCCAGGAAGTGAAGAGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GQHVCVFEVTLI*VLFFPGSEEPP Trigger: TGGTGGCTCTTCACTTCCTGGAAAGAAAAGAACCAAGATCAAAGTAACCTCAAAGACACATACATGCTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| CDS-3UTR TCA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACCAGGATTCGGGTATTTaGCAGTTGGAAACTCGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SDYPRHNLGTILVSLSFNQDSGI*QLETRD Trigger: ATCCCGAGTTTCCAACTGTCAAATACCCGAATCCTG...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR TCA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACGGACGATTTTGGCCTTaGTTTTGTCAGCCAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SDYPRHNLGTILVSLSFNGRFWP*FCQPRQ Trigger: TTGCCTTGGCTGACAAAATCAAGGCCAAAATCGTCC...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR GCA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACGGGAGCACACAACTCTaGGTAGTACTTGATTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDYPRHNLGTILVSLSFNGSTQL*VVLDFG Trigger: CCCAAAATCAAGTACTACGCAGAGTTGTGTGCTCCC...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CCA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACATGGCCCGCAAGATTTTaGAGGAAACAGTGCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: YPRHNLGTILVSLSFNYTWPARF*RKQCWT Trigger: TGTCCAGCACTGTTTCCTCCAAAATCTTGCGGGCCA...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR TCA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACACAAGGTCAAAAGCCTTaGAGGCCAACTGCACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: YPRHNLGTILVSLSFNYTQGQKP*RPTAQT Trigger: AGTTTGTGCAGTTGGCCTTCAAGGCTTTTGACCTTG...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR TCA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTGTTTCCCATCCACTTaGAGCCGGTTAATGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDYPRHNLGTILVSLSFNCFPST*SRLMFP Trigger: AGGAAACATTAACCGGCTTCAAGTGGATGGGAAACA...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR GCA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACAGCACGAACTTCACCTTaGTCTCCTTGTTTACCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YPRHNLGTILVSLSFNYTARTSP*SPCLPF Trigger: GAACGGTAAACAAGGAGAGCAAGGTGAAGTTCGTGC...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR GCA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACAAGTTCCTTTTTCAGATaGTCCGGATCACTGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YPRHNLGTILVSLSFNYTSSFFR*SGSLLP Trigger: TGGCAACAGTGATCCGGAGCATCTGAAAAAGGAACT...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR TCA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACGCATGTATGTGTCTTTaGGGTTACTTTGATCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDYPRHNLGTILVSLSFNACMCL*GYFDLG Trigger: ACCAAGATCAAAGTAACCTCAAAGACACATACATGC...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CCA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACACGTACTCCACATAGATaGCATTTAGCTGCTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: YPRHNLGTILVSLSFNYTRTPHR*HLAAEI Trigger: TATCTCAGCAGCTAAATGCCATCTATGTGGAGTACG...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR TCA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACATGGCATTTAGCTGCTaGGATAAAGACAAATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDYPRHNLGTILVSLSFNMAFSC*DKDKFF Trigger: GAAGAATTTGTCTTTATCTCAGCAGCTAAATGCCAT...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CCA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACAAAAAATGTTCTTCAATaGCACCGACTAACTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: YPRHNLGTILVSLSFNYTKNVLQ*HRLTHP Trigger: TGGATGAGTTAGTCGGTGCCATTGAAGAACATTTTT...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS CCA 90 bp | GAGGTTAAAGGGTTCTGGTCCCAACGCAGCCACTGCGCGGTCTCCTaGTCCAGTCGCGCGTCCATACCCAAGCCACTGCCTTCCGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EVKGFWSQRSHCAVS*SSRASIPKPLPSGA Trigger: GGCTCCGGAAGGCAGTGGCTTGGGTATGGACGCGCGACTGGACCAGGAGACCGCGCAGTGGCTGCGTTGGGACCAGAACCCTTTAACCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS GCA 90 bp | TTCACTGACTCAGAGGTTAAAGGGTTCTGGTCCCAACGCAGCCACTaGGCGGTCTCCTGGTCCAGTCGCGCGTCCATACCCAAGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: FTDSEVKGFWSQRSH*AVSWSSRASIPKPL Trigger: CAGTGGCTTGGGTATGGACGCGCGACTGGACCAGGAGACCGCGCAGTGGCTGCGTTGGGACCAGAACCCTTTAACCTCTGAGTCAGTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS TCA 90 bp | CCGGATCACTGTTGCCAGGGGGAGCACACAACTCTGCGTAGTACTTaGTTTTGGGCTCAGTCCCACTGGTCCGCATGGTGGCCACACCTC | + |
|
Preference number: 5 (lower is better) Translates to: PDHCCQGEHTTLRST*FWAQSHWSAWWPHL Trigger: GAGGTGTGGCCACCATGCGGACCAGTGGGACTGAGCCCAAAATCAAGTACTACGCAGAGTTGTGTGCTCCCCCTGGCAACAGTGATCCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS GCA 90 bp | GGTTATATCAGAGAAGAGGTATACAGGAACACCCTGGGTGATAAATaGAGTCGCAGCCAGCCGGGCAAACCTCCGGCTGCTGCCCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: GYIREEVYRNTLGDK*SRSQPGKPPAAAPA Trigger: AGCGGGGGCAGCAGCCGGAGGTTTGCCCGGCTGGCTGCGACTGCATTTATCACCCAGGGTGTTCCTGTATACCTCTTCTCTGATATAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS GCA 90 bp | GGATTGTGCGAGGCAGTGATCATGATGCCTGCGCAGAGTTTCAGGTaGGACACGGTGTACGGCACAAAGGGGGTGGGGGTTATATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLCEAVIMMPAQSFR*DTVYGTKGVGVISE Trigger: CTCTGATATAACCCCCACCCCCTTTGTGCCGTACACCGTGTCGCACCTGAAACTCTGCGCAGGCATCATGATCACTGCCTCGCACAATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS GCA 90 bp | GCCATTGTCCTGCTTTGGATTGTGCGAGGCAGTGATCATGATGCCTaGGCAGAGTTTCAGGTGCGACACGGTGTACGGCACAAAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: AIVLLWIVRGSDHDA*AEFQVRHGVRHKGG Trigger: ACCCCCTTTGTGCCGTACACCGTGTCGCACCTGAAACTCTGCGCAGGCATCATGATCACTGCCTCGCACAATCCAAAGCAGGACAATGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS CCA 90 bp | AAGGGGGTGGGGGTTATATCAGAGAAGAGGTATACAGGAACACCCTaGGTGATAAATGCAGTCGCAGCCAGCCGGGCAAACCTCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KGVGVISEKRYTGTP*VINAVAASRANLRL Trigger: CAGCCGGAGGTTTGCCCGGCTGGCTGCGACTGCATTTATCACCCAGGGTGTTCCTGTATACCTCTTCTCTGATATAACCCCCACCCCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS GCA 90 bp | CTGTGTGGTCTGGATGATGGTCAGGTCATTCATTCGAGAAATCCCTaGTCCCATAGGCGCTCGAAGGCCAGCTGTCCCAAACTCCATCCG | + |
|
Preference number: 5 (lower is better) Translates to: LCGLDDGQVIHSRNP*SHRRSKASCPKLHP Trigger: CGGATGGAGTTTGGGACAGCTGGCCTTCGAGCGCCTATGGGAGCAGGGATTTCTCGAATGAATGACCTGACCATCATCCAGACCACACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS GCA 90 bp | TTTCAGATGCTCCGGATCACTGTTGCCAGGGGGAGCACACAACTCTaGGTAGTACTTGATTTTGGGCTCAGTCCCACTGGTCCGCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: FQMLRITVARGSTQL*VVLDFGLSPTGPHG Trigger: ACCATGCGGACCAGTGGGACTGAGCCCAAAATCAAGTACTACGCAGAGTTGTGTGCTCCCCCTGGCAACAGTGATCCGGAGCATCTGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CAA 90 bp | TTGGAAACTCGGGATCCGGATCTTTCTGTTGGGGAACAGCTTCGGGAGGAGCAATTGTCCTGCTTTGGATaGTGCGAGGCAGTGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: LETRDPDLSVGEQLREEQLSCFG*CEAVIM Trigger: CATGATCACTGCCTCGCACAATCCAAAGCAGGACAA...TTGCTCCTCCCGAAGCTGTTCCCCAACAGAAAGATCCGGATCCCGAGTTTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199093.5 |
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| CDS CCA 90 bp | CGCATGGTGGCCACACCTCCATTAGCAAAGGTGAAGGTGATCATTTaGCTGCTCTTACTGGTAGGAAGAACAGCTTTCTTGTCAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RMVATPPLAKVKVII*LLLLVGRTAFLSGW Trigger: CCAGCCTGACAAGAAAGCTGTTCTTCCTACCAGTAAGAGCAGCCAAATGATCACCTTCACCTTTGCTAATGGAGGTGTGGCCACCATGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS TCA 90 bp | GGGCCCCAAAGCATTTCCGCAGCTCTTCTTTATTACCTCCAGCAATaGGCTGTTTCACTGACTCAGAGGTTAAAGGGTTCTGGTCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: GPQSISAALLYYLQQ*AVSLTQRLKGSGPN Trigger: GTTGGGACCAGAACCCTTTAACCTCTGAGTCAGTGAAACAGCTCATTGCTGGAGGTAATAAAGAAGAGCTGCGGAAATGCTTTGGGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CAA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACAAGGGCCCCCAGCTCATaGCCTGAGAACACTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: YPRHNLGTILVSLSFNYTRAPSS*PENTLH Trigger: GTGGAGAGTGTTCTCAGGCAATGAGCTGGGGGCCCT...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
||
| CDS-3UTR CAA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACCTGGTCTCCGAGCTGTaGGGCTCTGTTTCCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SDYPRHNLGTILVSLSFNLVSEL*GSVSHP Trigger: TGGATGGGAAACAGAGCCCAACAGCTCGGAGACCAG...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
||
| CDS-3UTR CAA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACATCCGGATCTTTCTGTaGGGGAACAGCTTCGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: SDYPRHNLGTILVSLSFNIRIFL*GNSFGR Trigger: CCTCCCGAAGCTGTTCCCCAACAGAAAGATCCGGAT...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CAA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACACCACTCACCACTGTCTaGCTTCTCAGCCACAGCGAG | + |
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Preference number: 5 (lower is better) Translates to: YPRHNLGTILVSLSFNYTPLTTV*LLSHSE Trigger: CTCGCTGTGGCTGAGAAGCAAGACAGTGGTGAGTGG...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CAA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACAAAAGTCAAGACACCTTaGCCCTCCTCAGGATTCGGG | + |
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Preference number: 5 (lower is better) Translates to: YPRHNLGTILVSLSFNYTKVKTP*PSSGFG Trigger: CCCGAATCCTGAGGAGGGCAAAGGTGTCTTGACTTT...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CAA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACAATGGCCCGCAAGATTTaGGAGGAAACAGTGCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: YPRHNLGTILVSLSFNYTMARKI*EETVLD Trigger: GTCCAGCACTGTTTCCTCCAAAATCTTGCGGGCCAT...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CAA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACAGCACTGACGCCATCTTaGTCCAGAACAAAGGGACAG | + |
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Preference number: 5 (lower is better) Translates to: YPRHNLGTILVSLSFNYTALTPS*SRTKGQ Trigger: CTGTCCCTTTGTTCTGGACAAAGATGGCGTCAGTGC...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CAA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACATTGTCCTGCTTTGGATaGTGCGAGGCAGTGATCATG | + |
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Preference number: 5 (lower is better) Translates to: YPRHNLGTILVSLSFNYTLSCFG*CEAVIM Trigger: CATGATCACTGCCTCGCACAATCCAAAGCAGGACAA...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CAA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACAGGTGAAGGTGATCATTaGGCTGCTCTTACTGGTAGG | + |
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Preference number: 5 (lower is better) Translates to: YPRHNLGTILVSLSFNYTGEGDH*AALTGR Trigger: CCTACCAGTAAGAGCAGCCAAATGATCACCTTCACC...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CAA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACATCAGGATTCGGGTATTaGACAGTTGGAAACTCGGGA | + |
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Preference number: 5 (lower is better) Translates to: YPRHNLGTILVSLSFNYTSGFGY*TVGNSG Trigger: TCCCGAGTTTCCAACTGTCAAATACCCGAATCCTGA...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CAA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACAAGGACGATTTTGGCCTaGATTTTGTCAGCCAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: YPRHNLGTILVSLSFNYTRTILA*ILSAKA Trigger: TGCCTTGGCTGACAAAATCAAGGCCAAAATCGTCCT...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CAA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACACTGTTTCCCATCCACTaGAAGCCGGTTAATGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: YPRHNLGTILVSLSFNYTLFPIH*KPVNVS Trigger: GGAAACATTAACCGGCTTCAAGTGGATGGGAAACAG...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CAA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACAAGACAAATTCTTCGTaGCTAGAAAGCTCGCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SDYPRHNLGTILVSLSFNKTNSS*LESSPA Trigger: AGCTGGCGAGCTTTCTAGCAACGAAGAATTTGTCTT...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CAA 90 bp | TATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACTACACAGGAAGAACAGCTTTCTaGTCAGGCTGGCTATCATCA | + |
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Preference number: 5 (lower is better) Translates to: YPRHNLGTILVSLSFNYTGRTAF*SGWLSS Trigger: TGATGATAGCCAGCCTGACAAGAAAGCTGTTCTTCC...TGTGTAGTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS-3UTR CAA 90 bp | AGTGACTATCCTAGACACAACTTAGGAACCATCTTGGTTTCTCTCTCTTTTAACGAGGTTACTTTGATCTaGGTTCTTTTCTTTCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SDYPRHNLGTILVSLSFNEVTLI*VLFFPG Trigger: TCCTGGAAAGAAAAGAACCAAGATCAAAGTAACCTC...GTTAAAAGAGAGAGAAACCAAGATGGTTCCTAAGTTGTGTCTAGGATAGTCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS GCA 72 bp | TCTCCTGGTCCAGTCGCGCGTCCATACCCAAGCCACTaGCTTCCGGAGCCGGTGTCTCTGTCGGTGTCGCCG | + |
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Preference number: 6 (lower is better) Translates to: SPGPVARPYPSH*LPEPVSLSVSP Trigger: CGGCGACACCGACAGAGACACCGGCTCCGGAAGGCAGTGGCTTGGGTATGGACGCGCGACTGGACCAGGAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS CCA 72 bp | GGGTTCTGGTCCCAACGCAGCCACTGCGCGGTCTCCTaGTCCAGTCGCGCGTCCATACCCAAGCCACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: GFWSQRSHCAVS*SSRASIPKPLP Trigger: AGGCAGTGGCTTGGGTATGGACGCGCGACTGGACCAGGAGACCGCGCAGTGGCTGCGTTGGGACCAGAACCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS GCA 72 bp | TCAGAGGTTAAAGGGTTCTGGTCCCAACGCAGCCACTaGGCGGTCTCCTGGTCCAGTCGCGCGTCCATACCC | + |
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Preference number: 6 (lower is better) Translates to: SEVKGFWSQRSH*AVSWSSRASIP Trigger: GGGTATGGACGCGCGACTGGACCAGGAGACCGCGCAGTGGCTGCGTTGGGACCAGAACCCTTTAACCTCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS TCA 72 bp | TGTTGCCAGGGGGAGCACACAACTCTGCGTAGTACTTaGTTTTGGGCTCAGTCCCACTGGTCCGCATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: CCQGEHTTLRST*FWAQSHWSAWW Trigger: CCACCATGCGGACCAGTGGGACTGAGCCCAAAATCAAGTACTACGCAGAGTTGTGTGCTCCCCCTGGCAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS GCA 72 bp | AGAGAAGAGGTATACAGGAACACCCTGGGTGATAAATaGAGTCGCAGCCAGCCGGGCAAACCTCCGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: REEVYRNTLGDK*SRSQPGKPPAA Trigger: AGCAGCCGGAGGTTTGCCCGGCTGGCTGCGACTGCATTTATCACCCAGGGTGTTCCTGTATACCTCTTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS GCA 72 bp | CTGCTTTGGATTGTGCGAGGCAGTGATCATGATGCCTaGGCAGAGTTTCAGGTGCGACACGGTGTACGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LLWIVRGSDHDA*AEFQVRHGVRH Trigger: GTGCCGTACACCGTGTCGCACCTGAAACTCTGCGCAGGCATCATGATCACTGCCTCGCACAATCCAAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS CCA 72 bp | ATGAGCTGTTTCACTGACTCAGAGGTTAAAGGGTTCTaGTCCCAACGCAGCCACTGCGCGGTCTCCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: MSCFTDSEVKGF*SQRSHCAVSWS Trigger: GGACCAGGAGACCGCGCAGTGGCTGCGTTGGGACCAGAACCCTTTAACCTCTGAGTCAGTGAAACAGCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS GCA 72 bp | CTCCGGATCACTGTTGCCAGGGGGAGCACACAACTCTaGGTAGTACTTGATTTTGGGCTCAGTCCCACTGGT | + |
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Preference number: 6 (lower is better) Translates to: LRITVARGSTQL*VVLDFGLSPTG Trigger: ACCAGTGGGACTGAGCCCAAAATCAAGTACTACGCAGAGTTGTGTGCTCCCCCTGGCAACAGTGATCCGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS GCA 72 bp | CTGGATGATGGTCAGGTCATTCATTCGAGAAATCCCTaGTCCCATAGGCGCTCGAAGGCCAGCTGTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: LDDGQVIHSRNP*SHRRSKASCPK Trigger: TTTGGGACAGCTGGCCTTCGAGCGCCTATGGGAGCAGGGATTTCTCGAATGAATGACCTGACCATCATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS GCA 72 bp | TGCACAAACTCGTGGCCCACACCATGGACAGAGGTGTaGACGAACTTCACCTTGCTCTCCTTGTTTACCGTT | + |
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Preference number: 6 (lower is better) Translates to: CTNSWPTPWTEV*TNFTLLSLFTV Trigger: AACGGTAAACAAGGAGAGCAAGGTGAAGTTCGTGCACACCTCTGTCCATGGTGTGGGCCACGAGTTTGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS CCA 72 bp | GGGGTTATATCAGAGAAGAGGTATACAGGAACACCCTaGGTGATAAATGCAGTCGCAGCCAGCCGGGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: GVISEKRYTGTP*VINAVAASRAN Trigger: GTTTGCCCGGCTGGCTGCGACTGCATTTATCACCCAGGGTGTTCCTGTATACCTCTTCTCTGATATAACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS CCA 72 bp | GTTTCAGGTGCGACACGGTGTACGGCACAAAGGGGGTaGGGGTTATATCAGAGAAGAGGTATACAGGAACAC | + |
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Preference number: 6 (lower is better) Translates to: VSGATRCTAQRG*GLYQRRGIQEH Trigger: GTGTTCCTGTATACCTCTTCTCTGATATAACCCCCACCCCCTTTGTGCCGTACACCGTGTCGCACCTGAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS CAA 90 bp | CCGCATGGTGGCCACACCTCCATTAGCAAAGGTGAAGGTGATCATTaGGCTGCTCTTACTGGTAGGAAGAACAGCTTTCTTGTCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PHGGHTSISKGEGDH*AALTGRKNSFLVRL Trigger: CAGCCTGACAAGAAAGCTGTTCTTCCTACCAGTAAGAGCAGCCAAATGATCACCTTCACCTTTGCTAATGGAGGTGTGGCCACCATGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS CCA 72 bp | GTTGTCCCAGTAGACCTTATAGCCATTGTCCTGCTTTaGATTGTGCGAGGCAGTGATCATGATGCCTGCGCA | + |
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Preference number: 6 (lower is better) Translates to: VVPVDLIAIVLL*IVRGSDHDACA Trigger: TGCGCAGGCATCATGATCACTGCCTCGCACAATCCAAAGCAGGACAATGGCTATAAGGTCTACTGGGACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087324.7 ENSMUST00000199093.5 |
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| CDS TCA 72 bp | TTTCCAGGTACCTGCAAAATCCCTGTGTGGTCTGGATaGTGGTCAGGTCATTCATTCGAGAAATCCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: FPGTCKIPVWSG*WSGHSFEKSLL Trigger: GAGCAGGGATTTCTCGAATGAATGACCTGACCATCATCCAGACCACACAGGGATTTTGCAGGTACCTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS GCA 72 bp | CCACACCATGGACAGAGGTGTGCACGAACTTCACCTTaGTCTCCTTGTTTACCGTTCTGTGAAAACAGTATT | + |
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Preference number: 6 (lower is better) Translates to: PHHGQRCARTSP*SPCLPFCENSI Trigger: AATACTGTTTTCACAGAACGGTAAACAAGGAGAGCAAGGTGAAGTTCGTGCACACCTCTGTCCATGGTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS CCA 72 bp | GCCACACCTCCATTAGCAAAGGTGAAGGTGATCATTTaGCTGCTCTTACTGGTAGGAAGAACAGCTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: ATPPLAKVKVII*LLLLVGRTAFL Trigger: CAAGAAAGCTGTTCTTCCTACCAGTAAGAGCAGCCAAATGATCACCTTCACCTTTGCTAATGGAGGTGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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| CDS CAA 72 bp | GGCCACACCTCCATTAGCAAAGGTGAAGGTGATCATTaGGCTGCTCTTACTGGTAGGAAGAACAGCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: GHTSISKGEGDH*AALTGRKNSFL Trigger: AAGAAAGCTGTTCTTCCTACCAGTAAGAGCAGCCAAATGATCACCTTCACCTTTGCTAATGGAGGTGTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087324.7 |
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