Pregenerated sensors for PGLYRP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042250Ensembl transcript IDs: ENSMUST00000047745.6, ENSMUST00000169698.8
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGGGCATCCACATATGCACAAGTGGATGTGTGAGCAGAGGAGGTaGGGGCACTCTCCCTGGGCTACGGATGAGAGCTGGGAACTACCA | + |
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Preference number: 1 (lower is better) Translates to: RGHPHMHKWMCEQRR*GHSPWATDESWELP Trigger: TGGTAGTTCCCAGCTCTCATCCGTAGCCCAGGGAGAGTGCCCTCACCTCCTCTGCTCACACATCCACTTGTGCATATGTGGATGCCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR GCA 90 bp | AGTCTGCCTTGCCCTTGGAAGAACATATGGTCCTGGCACTCAGGGTaGTCTATGGATACAATGGCACAGGACTTCAGAGACATGGCATGT | + |
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Preference number: 1 (lower is better) Translates to: SLPCPWKNIWSWHSG*SMDTMAQDFRDMAC Trigger: ACATGCCATGTCTCTGAAGTCCTGTGCCATTGTATCCATAGAGCACCCTGAGTGCCAGGACCATATGTTCTTCCAAGGGCAAGGCAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR CCA 90 bp | GAGAAGAGCCTTGGCTCAGGCTCAAGGGACTATAAGTGCAAAACTTaGGGGAAACTGGTAAATGTCACCAAGAGAGGACAAGGTCATCCC | + |
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Preference number: 1 (lower is better) Translates to: EKSLGSGSRDYKCKT*GKLVNVTKRGQGHP Trigger: GGGATGACCTTGTCCTCTCTTGGTGACATTTACCAGTTTCCCCCAAGTTTTGCACTTATAGTCCCTTGAGCCTGAGCCAAGGCTCTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR CCA 90 bp | CTTGCCCTTGGAAGAACATATGGTCCTGGCACTCAGGGTGCTCTATaGATACAATGGCACAGGACTTCAGAGACATGGCATGTGTTATGG | + |
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Preference number: 1 (lower is better) Translates to: LALGRTYGPGTQGAL*IQWHRTSETWHVLW Trigger: CCATAACACATGCCATGTCTCTGAAGTCCTGTGCCATTGTATCCATAGAGCACCCTGAGTGCCAGGACCATATGTTCTTCCAAGGGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR CCA 90 bp | GCTGACACAGGCTACCTAGTGGGAAAGAAAATTCTGCGGCTGTTCTaGAAAACTCATAATCTAGAAGAGGACCTGGATGTCTGCAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: ADTGYLVGKKILRLF*KTHNLEEDLDVCKG Trigger: CCCCTTGCAGACATCCAGGTCCTCTTCTAGATTATGAGTTTTCCAGAACAGCCGCAGAATTTTCTTTCCCACTAGGTAGCCTGTGTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR TCA 90 bp | TCAGAGACATGGCATGTGTTATGGACACATAAGTCACCACAGCTCTaGGCCTCCAACCAAGAAGTACCAGTGCCAAGAATAATGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: SETWHVLWTHKSPQL*ASNQEVPVPRIMAG Trigger: TCCTGCCATTATTCTTGGCACTGGTACTTCTTGGTTGGAGGCTCAGAGCTGTGGTGACTTATGTGTCCATAACACATGCCATGTCTCTGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR CCA 90 bp | GGAAGAACATATGGTCCTGGCACTCAGGGTGCTCTATGGATACAATaGCACAGGACTTCAGAGACATGGCATGTGTTATGGACACATAAG | + |
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Preference number: 1 (lower is better) Translates to: GRTYGPGTQGALWIQ*HRTSETWHVLWTHK Trigger: CTTATGTGTCCATAACACATGCCATGTCTCTGAAGTCCTGTGCCATTGTATCCATAGAGCACCCTGAGTGCCAGGACCATATGTTCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAACCAAGAAGTACCAGTGCCAAGAATAATGGCAGGATGGGAAACTGGACAGTGTGAGCAGAGGAGGTaGGGGCACTCTCCCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: SNQEVPVPRIMAGWETGQCEQRR*GHSPWA Trigger: AGCCCAGGGAGAGTGCCCTCACCTCCTCTGCTCACA...CTGTCCAGTTTCCCATCCTGCCATTATTCTTGGCACTGGTACTTCTTGGTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTCTGCAAGGGGGCATCCACATATGCACAAGTGGATGTGTGAGCAGAGGAGGGACCATTACCTGGCCTaGTTGAGCAGACAAGTACCT | + |
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Preference number: 2 (lower is better) Translates to: MSARGHPHMHKWMCEQRRDHYLA*LSRQVP Trigger: AGGTACTTGTCTGCTCAACCAGGCCAGGTAATGGTC...CCTCCTCTGCTCACACATCCACTTGTGCATATGTGGATGCCCCCTTGCAGACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR-3UTR GCA 90 bp | CCAAGAAGTACCAGTGCCAAGAATAATGGCAGGATGGGAAACTGGACAGCAAGGGAGGACCTGGATGTCTaGAAGGGGGCATCCACATAT | + |
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Preference number: 2 (lower is better) Translates to: PRSTSAKNNGRMGNWTAREDLDV*KGASTY Trigger: ATATGTGGATGCCCCCTTGCAGACATCCAGGTCCTC...CCTTGCTGTCCAGTTTCCCATCCTGCCATTATTCTTGGCACTGGTACTTCTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTCTGCAAGGGGGCATCCACATATGCACAAGTGGATGTGTGAGCAGAGGAGGTATAAGTGCAAAACTTaGGGGAAACTGGTAAATGTC | + |
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Preference number: 2 (lower is better) Translates to: MSARGHPHMHKWMCEQRRYKCKT*GKLVNV Trigger: GACATTTACCAGTTTCCCCCAAGTTTTGCACTTATA...CCTCCTCTGCTCACACATCCACTTGTGCATATGTGGATGCCCCCTTGCAGACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTTACAACAAATTATGAAGGTAGGGAGGGTTTCAGAGACCAGCAAGACTCATAGGAGAGAAGAGCCTTaGCTCAGGCTCAAGGGACTA | + |
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Preference number: 2 (lower is better) Translates to: CLQQIMKVGRVSETSKTHRREEP*LRLKGL Trigger: TAGTCCCTTGAGCCTGAGCCAAGGCTCTTCTCTCCT...ATGAGTCTTGCTGGTCTCTGAAACCCTCCCTACCTTCATAATTTGTTGTAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR GCA 72 bp | AGAGGACCTGGATGTCTGCAAGGGGGCATCCACATATaGACAAGTGGATGTGTGAGCAGAGGAGGTGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: RGPGCLQGGIHI*TSGCVSRGGEG Trigger: GCCCTCACCTCCTCTGCTCACACATCCACTTGTGCATATGTGGATGCCCCCTTGCAGACATCCAGGTCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR-3UTR CAA 90 bp | CCAAGAAGTACCAGTGCCAAGAATAATGGCAGGATGGGAAACTGGACAGCAAGGCATTACCTGGCCTGGTaGAGCAGACAAGTACCTAGG | + |
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Preference number: 3 (lower is better) Translates to: PRSTSAKNNGRMGNWTARHYLAW*SRQVPR Trigger: CCTAGGTACTTGTCTGCTCAACCAGGCCAGGTAATG...CCTTGCTGTCCAGTTTCCCATCCTGCCATTATTCTTGGCACTGGTACTTCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR GCA 72 bp | TGCCCTTGGAAGAACATATGGTCCTGGCACTCAGGGTaGTCTATGGATACAATGGCACAGGACTTCAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: CPWKNIWSWHSG*SMDTMAQDFRD Trigger: GTCTCTGAAGTCCTGTGCCATTGTATCCATAGAGCACCCTGAGTGCCAGGACCATATGTTCTTCCAAGGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR TCA 72 bp | AGGTATGACAAGAATCAGACCATTACCTGGCCTGGTTaGGCAGACAAGTACCTAGGAGAGAAGAGCCTTGGC | + |
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Preference number: 3 (lower is better) Translates to: RYDKNQTITWPG*ADKYLGEKSLG Trigger: GCCAAGGCTCTTCTCTCCTAGGTACTTGTCTGCTCAACCAGGCCAGGTAATGGTCTGATTCTTGTCATACCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR CCA 72 bp | AACCAAGAAGTACCAGTGCCAAGAATAATGGCAGGATaGGAAACTGGACAGCAAGGTTTCCACAGAGGGGTG | + |
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Preference number: 3 (lower is better) Translates to: NQEVPVPRIMAG*ETGQQGFHRGV Trigger: CACCCCTCTGTGGAAACCTTGCTGTCCAGTTTCCCATCCTGCCATTATTCTTGGCACTGGTACTTCTTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR CCA 72 bp | TATGGTCCTGGCACTCAGGGTGCTCTATGGATACAATaGCACAGGACTTCAGAGACATGGCATGTGTTATGG | + |
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Preference number: 3 (lower is better) Translates to: YGPGTQGALWIQ*HRTSETWHVLW Trigger: CCATAACACATGCCATGTCTCTGAAGTCCTGTGCCATTGTATCCATAGAGCACCCTGAGTGCCAGGACCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR CCA 72 bp | GGAAGAACATATGGTCCTGGCACTCAGGGTGCTCTATaGATACAATGGCACAGGACTTCAGAGACATGGCAT | + |
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Preference number: 3 (lower is better) Translates to: GRTYGPGTQGAL*IQWHRTSETWH Trigger: ATGCCATGTCTCTGAAGTCCTGTGCCATTGTATCCATAGAGCACCCTGAGTGCCAGGACCATATGTTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR CCA 72 bp | CTTGGCTCAGGCTCAAGGGACTATAAGTGCAAAACTTaGGGGAAACTGGTAAATGTCACCAAGAGAGGACAA | + |
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Preference number: 3 (lower is better) Translates to: LGSGSRDYKCKT*GKLVNVTKRGQ Trigger: TTGTCCTCTCTTGGTGACATTTACCAGTTTCCCCCAAGTTTTGCACTTATAGTCCCTTGAGCCTGAGCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR CCA 72 bp | GGCTACCTAGTGGGAAAGAAAATTCTGCGGCTGTTCTaGAAAACTCATAATCTAGAAGAGGACCTGGATGTC | + |
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Preference number: 3 (lower is better) Translates to: GYLVGKKILRLF*KTHNLEEDLDV Trigger: GACATCCAGGTCCTCTTCTAGATTATGAGTTTTCCAGAACAGCCGCAGAATTTTCTTTCCCACTAGGTAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR TCA 90 bp | AGAGCTGGGAACTACCAGACAGGCCATAGGTACCAGACAGGCCATAGGTACCAGCAGGCCCTTCATGGCTaGCAGAGCAACAGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: RAGNYQTGHRYQTGHRYQQALHG*QSNRAG Trigger: CCCAGCCCTGTTGCTCTGTCAGCCATGAAGGGCCTG...CTGGTACCTATGGCCTGTCTGGTACCTATGGCCTGTCTGGTAGTTCCCAGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR TCA 90 bp | AGAGCTGGGAACTACCAGACAGGCCATAGGTACCAGACAGGCCATAGGTACCAGCGGCACTCATCAGGCTaGCTGCATGTTCTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RAGNYQTGHRYQTGHRYQRHSSG*LHVLPA Trigger: TGCTGGGAGAACATGCAGTCAGCCTGATGAGTGCCG...CTGGTACCTATGGCCTGTCTGGTACCTATGGCCTGTCTGGTAGTTCCCAGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR GCA 90 bp | CCTGGGCTACGGATGAGAGCTGGGAACTACCAGACAGGCCATAGGTACCAGACAGCAACCAATTGCTTCTaGCCCCCATTCCTCACGAGA | + |
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Preference number: 4 (lower is better) Translates to: PGLRMRAGNYQTGHRYQTATNCF*PPFLTR Trigger: TCTCGTGAGGAATGGGGGGCAGAAGCAATTGGTTGC...TGTCTGGTACCTATGGCCTGTCTGGTAGTTCCCAGCTCTCATCCGTAGCCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR CCA 90 bp | CCTGGGCTACGGATGAGAGCTGGGAACTACCAGACAGGCCATAGGTACCAGACAGACAAGGACATCCACTaGCCTGCTCAGCTTAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: PGLRMRAGNYQTGHRYQTDKDIH*PAQLRA Trigger: AGCTCTAAGCTGAGCAGGCCAGTGGATGTCCTTGTC...TGTCTGGTACCTATGGCCTGTCTGGTAGTTCCCAGCTCTCATCCGTAGCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR CCA 90 bp | CCTGGGCTACGGATGAGAGCTGGGAACTACCAGACAGGCCATAGGTACCAGACAACAGGGCTGGGACTATaGCCTTCTTGGGTACCAAAG | + |
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Preference number: 4 (lower is better) Translates to: PGLRMRAGNYQTGHRYQTTGLGL*PSWVPK Trigger: CTTTGGTACCCAAGAAGGCCATAGTCCCAGCCCTGT...TGTCTGGTACCTATGGCCTGTCTGGTAGTTCCCAGCTCTCATCCGTAGCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR GCA 90 bp | ATGTCTGCAAGGGGGCATCCACATATGCACAAGTGGATGTGTGAGCAGAGGAGGGATCAAGTCCTGGGCTaGCTCCAGTGCAGCTGCATT | + |
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Preference number: 4 (lower is better) Translates to: MSARGHPHMHKWMCEQRRDQVLG*LQCSCI Trigger: AATGCAGCTGCACTGGAGGCAGCCCAGGACTTGATC...CCTCCTCTGCTCACACATCCACTTGTGCATATGTGGATGCCCCCTTGCAGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR CCA 90 bp | AGGACCTGGATGTCTGCAAGGGGGCATCCACATATGCACAAGTGGATGTGTGAGCTGTTTCCCCTTCTGTaGAGGGACCAGGCAGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RTWMSARGHPHMHKWMCELFPLL*RDQAVF Trigger: GAAGACTGCCTGGTCCCTCCACAGAAGGGGAAACAG...CTCACACATCCACTTGTGCATATGTGGATGCCCCCTTGCAGACATCCAGGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR GCA 90 bp | AGGACCTGGATGTCTGCAAGGGGGCATCCACATATGCACAAGTGGATGTGTGAGATGTTGTACAGTGCCTaGCCAGGGGACAGAGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: RTWMSARGHPHMHKWMCEMLYSA*PGDRVL Trigger: CAACACTCTGTCCCCTGGGCAGGCACTGTACAACAT...CTCACACATCCACTTGTGCATATGTGGATGCCCCCTTGCAGACATCCAGGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR GCA 90 bp | AAAACTTGGGGGAAACTGGTAAATGTCACCAAGAGAGGACAAGGTCATCCCAATCTGGGCTGCCTCCAGTaGAGCTGCATTGGGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KTWGKLVNVTKRGQGHPNLGCLQ*SCIGWG Trigger: TCCCCACCCAATGCAGCTGCACTGGAGGCAGCCCAG...ATTGGGATGACCTTGTCCTCTCTTGGTGACATTTACCAGTTTCCCCCAAGTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR CCA 90 bp | CCTGGGCTACGGATGAGAGCTGGGAACTACCAGACAGGCCATAGGTACCAGACATCTAGTCCAGGGATATaGTGTATGACAAGGACATCC | + |
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Preference number: 4 (lower is better) Translates to: PGLRMRAGNYQTGHRYQTSSPGI*CMTRTS Trigger: GGATGTCCTTGTCATACACCATATCCCTGGACTAGA...TGTCTGGTACCTATGGCCTGTCTGGTAGTTCCCAGCTCTCATCCGTAGCCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR CCA 90 bp | AGAGCTGGGAACTACCAGACAGGCCATAGGTACCAGACAGGCCATAGGTACCAGGGACTATGGCCTTCTTaGGTACCAAAGAAGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: RAGNYQTGHRYQTGHRYQGLWPS*VPKKAT Trigger: TGTTGCCTTCTTTGGTACCCAAGAAGGCCATAGTCC...CTGGTACCTATGGCCTGTCTGGTACCTATGGCCTGTCTGGTAGTTCCCAGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR GCA 90 bp | AGGACCTGGATGTCTGCAAGGGGGCATCCACATATGCACAAGTGGATGTGTGAGACTCATCAGGCTGACTaGATGTTCTCCCAGCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: RTWMSARGHPHMHKWMCETHQAD*MFSQQY Trigger: ATACTGCTGGGAGAACATGCAGTCAGCCTGATGAGT...CTCACACATCCACTTGTGCATATGTGGATGCCCCCTTGCAGACATCCAGGTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR TCA 90 bp | TCCAACCAAGAAGTACCAGTGCCAAGAATAATGGCAGGATGGGAAACTGGACAGTTGCTGCAGCCCTTCTaGCACCTGATCAGTTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SNQEVPVPRIMAGWETGQLLQPF*HLISLW Trigger: CCACAAACTGATCAGGTGTCAGAAGGGCTGCAGCAA...CTGTCCAGTTTCCCATCCTGCCATTATTCTTGGCACTGGTACTTCTTGGTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR CCA 90 bp | ATGTCTGCAAGGGGGCATCCACATATGCACAAGTGGATGTGTGAGCAGAGGAGGCACCTGATCAGTTTGTaGATTTTCCCAGGAGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: MSARGHPHMHKWMCEQRRHLISL*IFPGGN Trigger: GTTTCCTCCTGGGAAAATCCACAAACTGATCAGGTG...CCTCCTCTGCTCACACATCCACTTGTGCATATGTGGATGCCCCCTTGCAGACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR CCA 90 bp | TCCAACCAAGAAGTACCAGTGCCAAGAATAATGGCAGGATGGGAAACTGGACAGTTCATGAAGAACGACTaGAGATCTCGGACCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SNQEVPVPRIMAGWETGQFMKND*RSRTSR Trigger: CCTGCTGGTCCGAGATCTCCAGTCGTTCTTCATGAA...CTGTCCAGTTTCCCATCCTGCCATTATTCTTGGCACTGGTACTTCTTGGTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| 3UTR CAA 72 bp | ACTCATTCAGGAGACCACAGTACTAGGCAGCAAGTGTaGTCAGTCTGCCTTGCCCTTGGAAGAACATATGGT | + |
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Preference number: 4 (lower is better) Translates to: THSGDHSTRQQV*SVCLALGRTYG Trigger: ACCATATGTTCTTCCAAGGGCAAGGCAGACTGACAACACTTGCTGCCTAGTACTGTGGTCTCCTGAATGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR CCA 90 bp | TATAAGTGCAAAACTTGGGGGAAACTGGTAAATGTCACCAAGAGAGGACAAGGTCAGGGGACAGAGTGTTaGACACATCACTGTGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: YKCKTWGKLVNVTKRGQGQGTEC*THHCGP Trigger: TGGGCCACAGTGATGTGTCCAACACTCTGTCCCCTG...ACCTTGTCCTCTCTTGGTGACATTTACCAGTTTCCCCCAAGTTTTGCACTTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR TCA 90 bp | TCCAACCAAGAAGTACCAGTGCCAAGAATAATGGCAGGATGGGAAACTGGACAGGTTCTCCCAGCAGTATaGAGAATGATGGCATACTTC | + |
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Preference number: 4 (lower is better) Translates to: SNQEVPVPRIMAGWETGQVLPAV*RMMAYF Trigger: GAAGTATGCCATCATTCTTCATACTGCTGGGAGAAC...CTGTCCAGTTTCCCATCCTGCCATTATTCTTGGCACTGGTACTTCTTGGTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR CCA 90 bp | ACCTTTGGAAAAGGACTGGGGCCTTTAACTTGTTCCTCCATTTCTCCAACAAACGACCGTGGAACTATGTaGGGACAAGCTGCTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TFGKGLGPLTCSSISPTNDRGTM*GQAAFF Trigger: GAAGAAAGCAGCTTGTCCCCACATAGTTCCACGGTC...GTTTGTTGGAGAAATGGAGGAACAAGTTAAAGGCCCCAGTCCTTTTCCAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR CCA 90 bp | TCCAACCAAGAAGTACCAGTGCCAAGAATAATGGCAGGATGGGAAACTGGACAGTGTAGCTATCAGTTTTaGAACCTTGGTTATTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SNQEVPVPRIMAGWETGQCSYQF*NLGYSS Trigger: GCTGGAATAACCAAGGTTCCAAAACTGATAGCTACA...CTGTCCAGTTTCCCATCCTGCCATTATTCTTGGCACTGGTACTTCTTGGTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR CCA 90 bp | TATAAGTGCAAAACTTGGGGGAAACTGGTAAATGTCACCAAGAGAGGACAAGGTTCAGTTTTGGAACCTTaGTTATTCCAGCCCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: YKCKTWGKLVNVTKRGQGSVLEP*LFQPTP Trigger: AGGAGTGGGCTGGAATAACCAAGGTTCCAAAACTGA...ACCTTGTCCTCTCTTGGTGACATTTACCAGTTTCCCCCAAGTTTTGCACTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR CCA 90 bp | ACCTTTGGAAAAGGACTGGGGCCTTTAACTTGTTCCTCCATTTCTCCAACAAACCCTTTCTCAAAGAGTTaGGATATGTTGCCAAACAGT | + |
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Preference number: 4 (lower is better) Translates to: TFGKGLGPLTCSSISPTNPFSKS*DMLPNS Trigger: ACTGTTTGGCAACATATCCCAACTCTTTGAGAAAGG...GTTTGTTGGAGAAATGGAGGAACAAGTTAAAGGCCCCAGTCCTTTTCCAAAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS GCA 90 bp | CCCCTTGACCACAGCACACCGGATCAAGTCCTGGGCTGCCTCCAGTaGAGCTGCATTGGGTGGGGAACCTGTGAAGGTGCCCATGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: PLDHSTPDQVLGCLQ*SCIGWGTCEGAHEG Trigger: ACCTTCATGGGCACCTTCACAGGTTCCCCACCCAATGCAGCTGCACTGGAGGCAGCCCAGGACTTGATCCGGTGTGCTGTGGTCAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS CCA 90 bp | GAGCAGTGGGAGTCTCTCGCGCCCCAAACAGACCGTGGAACTATGTaGGGACAAGCTTTCTTCTGTTTCCCCTTCTGTGGAGGGACCAGG | + |
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Preference number: 5 (lower is better) Translates to: EQWESLAPQTDRGTM*GQAFFCFPFCGGTR Trigger: CCTGGTCCCTCCACAGAAGGGGAAACAGAAGAAAGCTTGTCCCCACATAGTTCCACGGTCTGTTTGGGGCGCGAGAGACTCCCACTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047745.6 |
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| CDS CCA 90 bp | GAGCAGTGGGAGTCTCTCGCGCCCCAAACAGACCGTGGAACTATGTaGGGACAAGCTGCTTTCTTCTGTTTCCCCTTCTGTGGAGGGACC | + |
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Preference number: 5 (lower is better) Translates to: EQWESLAPQTDRGTM*GQAAFFCFPFCGGT Trigger: GGTCCCTCCACAGAAGGGGAAACAGAAGAAAGCAGCTTGTCCCCACATAGTTCCACGGTCTGTTTGGGGCGCGAGAGACTCCCACTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR CAA 90 bp | AGGACCTGGATGTCTGCAAGGGGGCATCCACATATGCACAAGTGGATGTGTGAGCCAGGGGACAGAGTGTaGGACACATCACTGTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: RTWMSARGHPHMHKWMCEPGDRV*DTSLWP Trigger: GGGCCACAGTGATGTGTCCAACACTCTGTCCCCTGG...CTCACACATCCACTTGTGCATATGTGGATGCCCCCTTGCAGACATCCAGGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS TCA 90 bp | GGCACTCATCAGGCTGACTGCATGTTCTCCCAGCAGTATGAAGAATaGTGGCATACTTCGCAGGGAGAGTCATTCTGGAGCAGTGGGAGT | + |
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Preference number: 5 (lower is better) Translates to: GTHQADCMFSQQYEE*WHTSQGESFWSSGS Trigger: ACTCCCACTGCTCCAGAATGACTCTCCCTGCGAAGTATGCCATCATTCTTCATACTGCTGGGAGAACATGCAGTCAGCCTGATGAGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS CCA 90 bp | GAAATCAGGCCCTTCATGGCTGACAGAGCAACAGGGCTGGGACTATaGCCTTCTTGGGTACCAAAGAAGGCAACACCTAAGGAGATGTTC | + |
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Preference number: 5 (lower is better) Translates to: EIRPFMADRATGLGL*PSWVPKKATPKEMF Trigger: GAACATCTCCTTAGGTGTTGCCTTCTTTGGTACCCAAGAAGGCCATAGTCCCAGCCCTGTTGCTCTGTCAGCCATGAAGGGCCTGATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS-3UTR CAA 90 bp | ATGTCTGCAAGGGGGCATCCACATATGCACAAGTGGATGTGTGAGCAGAGGAGGCTACAGACAGTTTTGTaGTGGCACTCTAGTCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: MSARGHPHMHKWMCEQRRLQTVL*WHSSPG Trigger: CCCTGGACTAGAGTGCCACAACAAAACTGTCTGTAG...CCTCCTCTGCTCACACATCCACTTGTGCATATGTGGATGCCCCCTTGCAGACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR CAA 90 bp | TCCAACCAAGAAGTACCAGTGCCAAGAATAATGGCAGGATGGGAAACTGGACAGTCCAGTGCAGCTGCATaGGGTGGGGAACCTGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: SNQEVPVPRIMAGWETGQSSAAA*GGEPVK Trigger: CTTCACAGGTTCCCCACCCAATGCAGCTGCACTGGA...CTGTCCAGTTTCCCATCCTGCCATTATTCTTGGCACTGGTACTTCTTGGTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS TCA 90 bp | CCACGAGGAAGTTATACCCAATGTCACATGCATTTAGCCTGTTCATaGAGAACGACTGGAGATCTCGGACCAGCAGGCGGCACTCATCAG | + |
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Preference number: 5 (lower is better) Translates to: PRGSYTQCHMHLACS*RTTGDLGPAGGTHQ Trigger: CTGATGAGTGCCGCCTGCTGGTCCGAGATCTCCAGTCGTTCTTCATGAACAGGCTAAATGCATGTGACATTGGGTATAACTTCCTCGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS-3UTR CAA 90 bp | AGAGCTGGGAACTACCAGACAGGCCATAGGTACCAGACAGGCCATAGGTACCAGGCCTTTCTCAAAGAGTaGGGATATGTTGCCAAACAG | + |
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Preference number: 5 (lower is better) Translates to: RAGNYQTGHRYQTGHRYQAFLKE*GYVAKQ Trigger: CTGTTTGGCAACATATCCCAACTCTTTGAGAAAGGC...CTGGTACCTATGGCCTGTCTGGTACCTATGGCCTGTCTGGTAGTTCCCAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS-3UTR CAA 90 bp | AAAACTTGGGGGAAACTGGTAAATGTCACCAAGAGAGGACAAGGTCATCCCAATTGGCTACAGACAGTTTaGTTGTGGCACTCTAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: KTWGKLVNVTKRGQGHPNWLQTV*LWHSSP Trigger: TGGACTAGAGTGCCACAACAAAACTGTCTGTAGCCA...ATTGGGATGACCTTGTCCTCTCTTGGTGACATTTACCAGTTTCCCCCAAGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS GCA 72 bp | CCCCTTGACCACAGCACACCGGATCAAGTCCTGGGCTaGCTCCAGTGCAGCTGCATTGGGTGGGGAACCTGT | + |
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Preference number: 6 (lower is better) Translates to: PLDHSTPDQVLG*LQCSCIGWGTC Trigger: ACAGGTTCCCCACCCAATGCAGCTGCACTGGAGGCAGCCCAGGACTTGATCCGGTGTGCTGTGGTCAAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS GCA 72 bp | ACACCGGATCAAGTCCTGGGCTGCCTCCAGTGCAGCTaGATTGGGTGGGGAACCTGTGAAGGTGCCCATGAA | + |
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Preference number: 6 (lower is better) Translates to: TPDQVLGCLQCS*IGWGTCEGAHE Trigger: TTCATGGGCACCTTCACAGGTTCCCCACCCAATGCAGCTGCACTGGAGGCAGCCCAGGACTTGATCCGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS CCA 72 bp | ATGGCATACTTCGCAGGGAGAGTCATTCTGGAGCAGTaGGAGTCTCTCGCGCCCCAAACAGACCGTGGAACT | + |
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Preference number: 6 (lower is better) Translates to: MAYFAGRVILEQ*ESLAPQTDRGT Trigger: AGTTCCACGGTCTGTTTGGGGCGCGAGAGACTCCCACTGCTCCAGAATGACTCTCCCTGCGAAGTATGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS CCA 72 bp | GGAGCAGTGGGAGTCTCTCGCGCCCCAAACAGACCGTaGAACTATGTGGGGACAAGCTGCTTTCTTCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: GAVGVSRAPNRP*NYVGTSCFLLF Trigger: AAACAGAAGAAAGCAGCTTGTCCCCACATAGTTCCACGGTCTGTTTGGGGCGCGAGAGACTCCCACTGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169698.8 |
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| CDS CCA 72 bp | CCCTTCATGGCTGACAGAGCAACAGGGCTGGGACTATaGCCTTCTTGGGTACCAAAGAAGGCAACACCTAAG | + |
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Preference number: 6 (lower is better) Translates to: PFMADRATGLGL*PSWVPKKATPK Trigger: CTTAGGTGTTGCCTTCTTTGGTACCCAAGAAGGCCATAGTCCCAGCCCTGTTGCTCTGTCAGCCATGAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS TCA 72 bp | CTTCTTCACAGCATAGGAAATCAGGCCCTTCATGGCTaGCAGAGCAACAGGGCTGGGACTATGGCCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LLHSIGNQALHG*QSNRAGTMAFL Trigger: CAAGAAGGCCATAGTCCCAGCCCTGTTGCTCTGTCAGCCATGAAGGGCCTGATTTCCTATGCTGTGAAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS CCA 72 bp | AAATCAGGCCCTTCATGGCTGACAGAGCAACAGGGCTaGGACTATGGCCTTCTTGGGTACCAAAGAAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: KSGPSWLTEQQG*DYGLLGYQRRQ Trigger: TTGCCTTCTTTGGTACCCAAGAAGGCCATAGTCCCAGCCCTGTTGCTCTGTCAGCCATGAAGGGCCTGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS CCA 72 bp | ATGTCACATGCATTTAGCCTGTTCATGAAGAACGACTaGAGATCTCGGACCAGCAGGCGGCACTCATCAGGC | + |
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Preference number: 6 (lower is better) Translates to: MSHAFSLFMKND*RSRTSRRHSSG Trigger: GCCTGATGAGTGCCGCCTGCTGGTCCGAGATCTCCAGTCGTTCTTCATGAACAGGCTAAATGCATGTGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS TCA 72 bp | CAGGCTGACTGCATGTTCTCCCAGCAGTATGAAGAATaGTGGCATACTTCGCAGGGAGAGTCATTCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: QADCMFSQQYEE*WHTSQGESFWS Trigger: GCTCCAGAATGACTCTCCCTGCGAAGTATGCCATCATTCTTCATACTGCTGGGAGAACATGCAGTCAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS GCA 72 bp | CTTGAAATGGGGCCACGTCTTGATAATGTTGTACAGTaGCTGCCCAGGGGACAGAGTGTTGGACACATCACT | + |
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Preference number: 6 (lower is better) Translates to: LEMGPRLDNVVQ*LPRGQSVGHIT Trigger: AGTGATGTGTCCAACACTCTGTCCCCTGGGCAGGCACTGTACAACATTATCAAGACGTGGCCCCATTTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS TCA 72 bp | ATGTTGCCAAACAGTTGCTGCAGCCCTTCTGACACCTaGTCAGTTTGTGGATTTTCCCAGGAGGAAACACCC | + |
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Preference number: 6 (lower is better) Translates to: MLPNSCCSPSDT*SVCGFSQEETP Trigger: GGGTGTTTCCTCCTGGGAAAATCCACAAACTGATCAGGTGTCAGAAGGGCTGCAGCAACTGTTTGGCAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS TCA 72 bp | AGTTATACCCAATGTCACATGCATTTAGCCTGTTCATaGAGAACGACTGGAGATCTCGGACCAGCAGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: SYTQCHMHLACS*RTTGDLGPAGG Trigger: GCCGCCTGCTGGTCCGAGATCTCCAGTCGTTCTTCATGAACAGGCTAAATGCATGTGACATTGGGTATAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS CCA 72 bp | GGGACCAGGCAGTCTTCACTTTTCGCAAGCAATGGCTaGATGTACTTGGATGACAAGTGTCCCTTCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: GTRQSSLFASNG*MYLDDKCPFFT Trigger: TGTGAAGAAGGGACACTTGTCATCCAAGTACATCCAGCCATTGCTTGCGAAAAGTGAAGACTGCCTGGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS CAA 72 bp | GCCTGTAGTTCCCGAAGCTTCTGGCTACAGACAGTTTaGTTGTGGCACTCTAGTCCAGGGATATGGTGTATG | + |
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Preference number: 6 (lower is better) Translates to: ACSSRSFWLQTV*LWHSSPGIWCM Trigger: CATACACCATATCCCTGGACTAGAGTGCCACAACAAAACTGTCTGTAGCCAGAAGCTTCGGGAACTACAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS TCA 72 bp | TTGGGATATGTTGCCAAACAGTTGCTGCAGCCCTTCTaGCACCTGATCAGTTTGTGGATTTTCCCAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LGYVAKQLLQPF*HLISLWIFPGG Trigger: TCCTCCTGGGAAAATCCACAAACTGATCAGGTGTCAGAAGGGCTGCAGCAACTGTTTGGCAACATATCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS GCA 72 bp | GGCCTAGTATGCCTTTCTCAAAGAGTTGGGATATGTTaGCAAACAGTTGCTGCAGCCCTTCTGACACCTGAT | + |
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Preference number: 6 (lower is better) Translates to: GLVCLSQRVGIC*QTVAAALLTPD Trigger: ATCAGGTGTCAGAAGGGCTGCAGCAACTGTTTGGCAACATATCCCAACTCTTTGAGAAAGGCATACTAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS CCA 72 bp | ACATCATCACGGCCTAGTATGCCTTTCTCAAAGAGTTaGGATATGTTGCCAAACAGTTGCTGCAGCCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TSSRPSMPFSKS*DMLPNSCCSPS Trigger: AGAAGGGCTGCAGCAACTGTTTGGCAACATATCCCAACTCTTTGAGAAAGGCATACTAGGCCGTGATGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS GCA 72 bp | ATCAGTTTGTGGATTTTCCCAGGAGGAAACACCCTGTaGCAGAAGAACCAAGATAGAGAAGACAAGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: ISLWIFPGGNTL*QKNQDREDKKP Trigger: TGGCTTCTTGTCTTCTCTATCTTGGTTCTTCTGGCACAGGGTGTTTCCTCCTGGGAAAATCCACAAACTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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| CDS CAA 72 bp | CAAAGAGATGTCATTGTAGCTATCAGTTTTGGAACCTaGGTTATTCCAGCCCACTCCTTCATAAACACCACC | + |
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Preference number: 6 (lower is better) Translates to: QRDVIVAISFGT*VIPAHSFINTT Trigger: GGTGGTGTTTATGAAGGAGTGGGCTGGAATAACCAAGGTTCCAAAACTGATAGCTACAATGACATCTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047745.6 ENSMUST00000169698.8 |
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