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Pregenerated sensors for PGLYRP3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042244

Ensembl transcript IDs: ENSMUST00000047660.5

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp ATCTATGTGAAAGGACTGTGTGTCTCTTACACGAACCAAACAGTCTaGAGACTCATTGCAGCTTTTCCCAGCAGTGTGGATGATGATGAC +
Preference number: 5 (lower is better)
Translates to: IYVKGLCVSYTNQTV*RLIAAFPSSVDDDD
Trigger: GTCATCATCATCCACACTGCTGGGAAAAGCTGCAATGAGTCTGCAGACTGTTTGGTTCGTGTAAGAGACACACAGTCCTTTCACATAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047660.5
CDS CCA 90 bp GAACCAAACAGGTCTCTTCTTTTAAGAGAAATGGCTGAATGTACTTaGGTGACAGGTAGCCATTCTGGATGGCAAAGAAGATCAGATCCT +
Preference number: 5 (lower is better)
Translates to: EPNRSLLLREMAECT*VTGSHSGWQRRSDP
Trigger: AGGATCTGATCTTCTTTGCCATCCAGAATGGCTACCTGTCACCCAAGTACATTCAGCCATTTCTCTTAAAAGAAGAGACCTGTTTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047660.5
CDS TCA 90 bp CCTTCAGTGAAGCTTCATTTGGAGGCTTTTCTACAAAGTTTCCCATaGAGGCAATTCCTAGAGCAATATCGTTGTATCCATAGGTATGAG +
Preference number: 5 (lower is better)
Translates to: PSVKLHLEAFLQSFP*RQFLEQYRCIHRYE
Trigger: CTCATACCTATGGATACAACGATATTGCTCTAGGAATTGCCTTCATGGGAAACTTTGTAGAAAAGCCTCCAAATGAAGCTTCACTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047660.5
CDS CCA 72 bp AAGGCAATGTCACACCAGCCTTTGTTGTGGACATATTaGGACTGTAGGACCCGCACCACCTGGCTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: KAMSHQPLLWTY*DCRTRTTWLQV
Trigger: CACCTGCAGCCAGGTGGTGCGGGTCCTACAGTCCCAATATGTCCACAACAAAGGCTGGTGTGACATTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047660.5
CDS CAA 72 bp CTTGCTCCCCACTCTTTTCTGGAAACTATGGTTGGGTaGCCACAGGCCAGGAGACTGAGAGCCAAGAAGCCA +
Preference number: 6 (lower is better)
Translates to: LAPHSFLETMVG*PQARRLRAKKP
Trigger: TGGCTTCTTGGCTCTCAGTCTCCTGGCCTGTGGCAACCCAACCATAGTTTCCAGAAAAGAGTGGGGAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047660.5
CDS CAA 72 bp CCGCACCACCTGGCTGCAGGTGATCTGATCTTGGCATaGCATCCTGGTAACTTGCTCTATGATGAGGTAGGG +
Preference number: 6 (lower is better)
Translates to: PHHLAAGDLILA*HPGNLLYDEVG
Trigger: CCCTACCTCATCATAGAGCAAGTTACCAGGATGCAATGCCAAGATCAGATCACCTGCAGCCAGGTGGTGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047660.5
CDS CAA 90 bp CACCTGGCTGCAGGTGATCTGATCTTGGCATTGCATCCTGGTAACTaGCTCTATGATGAGGTAGGGTACGGGCAGGCTCAGTGGTACTCT +
Preference number: 6 (lower is better)
Translates to: HLAAGDLILALHPGN*LYDEVGYGQAQWYS
Trigger: AGAGTACCACTGAGCCTGCCCGTACCCTACCTCATCATAGAGCAAGTTACCAGGATGCAATGCCAAGATCAGATCACCTGCAGCCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047660.5
CDS TCA 72 bp GGGTACGGGCAGGCTCAGTGGTACTCTGCAGGTAAGTaGACTTGCTCCCCACTCTTTTCTGGAAACTATGGT +
Preference number: 6 (lower is better)
Translates to: GYGQAQWYSAGK*TCSPLFSGNYG
Trigger: ACCATAGTTTCCAGAAAAGAGTGGGGAGCAAGTTCACTTACCTGCAGAGTACCACTGAGCCTGCCCGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047660.5
CDS CAA 72 bp GCAGGTGATCTGATCTTGGCATTGCATCCTGGTAACTaGCTCTATGATGAGGTAGGGTACGGGCAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: AGDLILALHPGN*LYDEVGYGQAQ
Trigger: CTGAGCCTGCCCGTACCCTACCTCATCATAGAGCAAGTTACCAGGATGCAATGCCAAGATCAGATCACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047660.5
CDS CAA 90 bp GTAAGTGAACTTGCTCCCCACTCTTTTCTGGAAACTATGGTTGGGTaGCCACAGGCCAGGAGACTGAGAGCCAAGAAGCCAAGAAGCCTG +
Preference number: 6 (lower is better)
Translates to: VSELAPHSFLETMVG*PQARRLRAKKPRSL
Trigger: CAGGCTTCTTGGCTTCTTGGCTCTCAGTCTCCTGGCCTGTGGCAACCCAACCATAGTTTCCAGAAAAGAGTGGGGAGCAAGTTCACTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047660.5
CDS CAA 90 bp TCATCTCCAACCAGAAAGTTGAAGGCAATGTCACACCAGCCTTTGTaGTGGACATATTGGGACTGTAGGACCCGCACCACCTGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: SSPTRKLKAMSHQPL*WTYWDCRTRTTWLQ
Trigger: CTGCAGCCAGGTGGTGCGGGTCCTACAGTCCCAATATGTCCACAACAAAGGCTGGTGTGACATTGCCTTCAACTTTCTGGTTGGAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047660.5
CDS CCA 72 bp AGAAAGTTGAAGGCAATGTCACACCAGCCTTTGTTGTaGACATATTGGGACTGTAGGACCCGCACCACCTGG +
Preference number: 6 (lower is better)
Translates to: RKLKAMSHQPLL*TYWDCRTRTTW
Trigger: CCAGGTGGTGCGGGTCCTACAGTCCCAATATGTCCACAACAAAGGCTGGTGTGACATTGCCTTCAACTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047660.5
CDS CAA 72 bp ACCAGAAAGTTGAAGGCAATGTCACACCAGCCTTTGTaGTGGACATATTGGGACTGTAGGACCCGCACCACC +
Preference number: 6 (lower is better)
Translates to: TRKLKAMSHQPL*WTYWDCRTRTT
Trigger: GGTGGTGCGGGTCCTACAGTCCCAATATGTCCACAACAAAGGCTGGTGTGACATTGCCTTCAACTTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047660.5
CDS GCA 72 bp AAAGGACTGTGTGTCTCTTACACGAACCAAACAGTCTaGAGACTCATTGCAGCTTTTCCCAGCAGTGTGGAT +
Preference number: 6 (lower is better)
Translates to: KGLCVSYTNQTV*RLIAAFPSSVD
Trigger: ATCCACACTGCTGGGAAAAGCTGCAATGAGTCTGCAGACTGTTTGGTTCGTGTAAGAGACACACAGTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047660.5
CDS CCA 72 bp AGGTCTCTTCTTTTAAGAGAAATGGCTGAATGTACTTaGGTGACAGGTAGCCATTCTGGATGGCAAAGAAGA +
Preference number: 6 (lower is better)
Translates to: RSLLLREMAECT*VTGSHSGWQRR
Trigger: TCTTCTTTGCCATCCAGAATGGCTACCTGTCACCCAAGTACATTCAGCCATTTCTCTTAAAAGAAGAGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047660.5
CDS TCA 72 bp CCTTCATATACTTCACCATCCTGGCCCACTAGAAAGTaGTATGCAATGTCGCAGAAATCTTGGTTATCTATG +
Preference number: 6 (lower is better)
Translates to: PSYTSPSWPTRK*YAMSQKSWLSM
Trigger: CATAGATAACCAAGATTTCTGCGACATTGCATATCACTTTCTAGTGGGCCAGGATGGTGAAGTATATGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047660.5
CDS TCA 72 bp AAGCTTCATTTGGAGGCTTTTCTACAAAGTTTCCCATaGAGGCAATTCCTAGAGCAATATCGTTGTATCCAT +
Preference number: 6 (lower is better)
Translates to: KLHLEAFLQSFP*RQFLEQYRCIH
Trigger: ATGGATACAACGATATTGCTCTAGGAATTGCCTTCATGGGAAACTTTGTAGAAAAGCCTCCAAATGAAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047660.5